TCONS_00018976 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018976
Unique NameTCONS_00018976
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1306

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018976 ID=TCONS_00018976|Name=TCONS_00018976|organism=Clytia hemisphaerica|type=transcript|length=1306bp
aaaaagtaattaaaaagcAACCACAAGCCGCTATTACCAGCGCATAGACA
ACATCATAAATCAATTATAATTGTCGTTGccagagaaaaataatttccta
CCAATATCTTCTGGTATTTGTAGTAAGACGTGATTCCCAATCAGAGTGGA
TTTGCATTACAATTATCGATGATCCGATaatgAAGGAGATTACTTGACAT
GCCAACCAACATATTGATTCTAGCGAAATTGGGTGCTGGTACTGGTAACA
GAACAACTGCTGAACGTATCAGGCAGCACTTGAACAATTCGGATTTGTGC
CCACTTCTTTGTGACGTCACACAATTCCGATCACCACGTGACCTTTCTGA
TTATGTCATCCATAATGACGTCACTTGTCTCATTGTTATTCATGCGTACA
GAgctggaaaatttttaaacgACATCAGTATACCATTTGCGTTGGTATTT
GGTGGAACTGACGTTCAATGTTCATCCTGGAATGATCAAGAAAATGCAAT
CATGGCTGACGTTGTTGCCAAGGCAATAGTTCTGATCGCGTTTTCAGAAG
TCATGAAAGAAGCAGCATCGGTCAAATGGCCATCGATCTTGAAAGAGAAG
AAGATATTTGTACAGCCGCAAGGTGTGACGATTGAGAAGATAGGACCAAC
AAATTATTCGTTTCAACATCTATTCAATGATAATGGGATGAGCGaagtta
aaacaaaagaaaagATAATTTTCCTGTTTGTGGGTGGTATTAGACCGGTG
AAAGATCCTTTGTTCCTGATTTATACTTTTGCTCAGATGCATGAAGAGAA
TGATCGAATCCTGTTTGTCATCATCGGGCCCATACTGGATGAAGAATATG
CTCGCAAATGTCGTCTCGCTACATCAAAaCTGAAAGGGATATACATGTTT
GATCAAATATCACGTGATAAAGTTCATGCTTTGATACACCAATCTGTTGC
TTTGGTCAATTCCTCCATCGAAGAAGGCATGGCTGGAGCCATTCTTGAGt
caatgaAAATAGAGACACCAGTTGTTGTTCGGAATAACCGTGGAAACGCA
TCCATTGTGCAGCATCAATCCACTGGATTGCTTTTCCAACACCCACAAga
ttttagagaGCAAGCCAATCTTCTTTTGGAAAACTCAACCCTGCGTAGAA
ACCTCATTCAAAACGCACAAGATTTCATCGAGTCCAATCACAACCCTGAT
GTTGAACGTTCTACCTATcacgaaattatcaaaattcttGTCAAACCGTA
GTAATTaacaaatacacgtttttttataagagaatccaaaatttttgaag
cctttg
Run BLAST on NCBI

transcript from alignment at sc0000314:191799..205366+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018976 ID=TCONS_00018976|Name=TCONS_00018976|organism=Clytia hemisphaerica|type=transcript|length=13568bp|location=Sequence derived from alignment at sc0000314:191799..205366+ (Clytia hemisphaerica)
aaaaagtaattaaaaagcAACCACAAGCCGCTATTACCAGCGCATAGACA
ACATCATAAATCAATTATAATTGTCGTTGccagagaaaaataatttccta
CCAATATCTTCTGGTATTTGTAGTAAGACGTGATTCCCAATCAGAGTGGA
TTTGCATTACAATTATCGATGATCCGATGTAcgtattttgttattttttt
ataatgtccAAATACACCTATCTGCAGACACGTGTTTTGTCCTTCCCAGG
ACTCGTCAGTGCGGCTCgggtaagcgagcatagactgctgttgtctaacc
agagtgctcaaaacactaagTTATGAGCTTcgcataatcgcttgtggtga
aCGGAGAAGCAGAGCTTGCTTCTCAACAGAGTCTATAGAGTGCTTAATAC
ATGTCCAAATATACAGTTGCTCCGATTCATTCGATCTATAAGGGGACcaa
aattttgtgttaaaagaTTCAAATTACAGAGAATATTTTTTAAGACATTC
CAGTGGAAGGACTAAATGTAATGTTTGATTTAGAATTACAGaggctcgaa
ttagagagacaGGTTGGCTGTAATGTTCAACTTTTGTATTTAAAATAAtc
atagtttttattttttattNCtgtgatggcttaaagcacgacatctagcc
cttcgggctttttaTAAATCTGAGGTTGTGATTACAAAAGGTAAGGTTAT
GACAGATTATGTGCTCCACTGTAGGCTAAATGTAATCAGCATCTAGTAAT
AAGTATAAGCACTCTTACAAtcgcaatttttgaaaaactgacaTTACAAC
AGACGATTAGgggagtcaacattgagaaaacaCGTAGATTTTTTTTGTAG
TCAGTATAGTTGTAACAtacttttttttctcattttactTGACTTTAATA
ATAGCTATCATTAATCTCCTCTATAAAAGAACAgtaatgacttttttttt
attttaacatattttttctGATTATCCCCATAATTATTATATTCTATTGT
TCTAGAGCACCAAATTTCTATACCCACCGCATTTTCACGAGTAGAATTTC
ATTCAATTTATTGATCTTTCATGTTTTGACATAGTGATACCGTAACTTAG
TGTAATGCCGACGTACCTTGTTTAATTCCGTCATAGCAATTATCTGGTCC
TTTAAATGTTTATGAATAAATCCTTCTGAGAAGCTGTTAAAGAAATCACT
CTAACTATTCTAAAtactttgcagaccagataaCGGCTATgacggaatta
gacaaggtatgtcgaCATAAGACGAATTCACGGTAAGTCTCAGTAAGGAC
AGTGGAGATTTTAACTAGATTTTTGTAAGCCTTTTTCCATACCTTATCTG
TATTCGATCTTTTCATCTATTGGAATAAACACGAGCTTTTATTATTAACC
TGATCAACCTATTTAGTTTTAGTAATTACAATTACATGTACTAGACATTT
TGATTGATAGCGGAAATACCAGCAGCTTTACTCTTCAAGTTACTCAATAA
CGACTATAggagatttgaaattttattttgtagatTCAATATAATGTATA
TTTTTCACATGAGAGAAGATTGAGGGAAAGGCTATGTGATTCCAACCAAA
agacccctgtgtcacagacccgctgaggCCTTAGCCCCagtggaaaattt
ggcaaaaatttcgttcccggtgggaaaaatttcctaaattccagccccac
tgagaaattgactttgatttcatccccattcgaaattcatcgTTCATGCA
AATTGcaatccaaaaccatccccactggatttggaacaaaataaattttt
atccccgctgtaagaaaaagtttcaccggggctgtgagacagtggTGTAC
CAAACAAGACAGCCAAATCTTTCTTGACGATCTTACTTCTCTTTTCTCTA
ATCTCTCATGGGAGTAATCAATgtaataattgtttttttgtatgTTTACT
ATATTATTGTTTATTATGAATTTATGAAGAatactttttcgttttttgtt
tgttttctttgatttacaAAATTGAAAGAGATTGAGGGGAAAGCTAAACA
TTCTTAATTAAAGAGAATtgactacatgtttttttttctataagcataac
gtttataagcatatacaggCTCAGTTATTGGTTCCCTAAACAATAGCTCT
ATTGTCCCTAAACAAtagctctattgtttaagaacaatagaatgttaagc
ataatgcgagcctgatataggggtagacaattgcttataaaaaacatgta
tggtGATTTTATAATACATACTTCAACATGGCCTTTTTGGGCCTGAACCT
GAACCTTTGTAAATTGAAgtataatgttttttttgcatCATAATCTGCTT
GTtcctgttttcttctttttcattttagcaaatgaaaaattgataaaaag
taattaaaaagcAACCACAAGCCGCTATTACCAGCGCATAGACAACATCA
TAAATCAATTATAATTGTCGTTGccagagaaaaataatttcctaCCAATA
TCTTCTGGTATTTGTAGTAAGACGTGATTCCCAATCAGAGTGGATTTGCA
TTACAATTATCGATGATCCGATGTAcgtattttgttatttttttataatg
tccAAATACACCTATCTGCAGACACGTGTTTTGTCCTTCCCAGGACTCGT
CAGTGCGGCTCgggtaagcgagcatagactgctgttgtctaaccagagtg
ctcaaaacactaagTTATGAGCTTcgcataatcgcttgtggtgaaCGGAG
AAGCAGAGCTTGCTTCTCAACAGAGTCTATAGAGTGCTTAATACATGTCC
AAATATACAGTTGCTCCGATTCATTCGATCTATAAGGGGACcaaaatttt
gtgttaaaagaTTCAAATTACAGAGAATATTTTTTAAGACATTCCAGTGG
AAGGACTAAATGTAATGTTTGATTTAGAATTACAGaggctcgaattagag
agacaGGTTGGCTGTAATGTTCAACTTTTGTATTTAAAATAAtcatagtt
tttattttttattttttaagaatgAAGGAGATTACTTGACATGCCAACCA
ACATATTGATTCTAGCGAAATTGGGTGCTGGTACTGGTAACAGAACAACT
GCTGAACGTATCAGGTGcttatttattgattttaaagCGACGGGAAGAGT
GGGCCTGTAAGGAATTTTTTTGGATGGGGTATGAACACAGatctataaag
cccgaagggctaagtcaactttaagctttctccagcaaaaattttcggag
cgcgagatcaaaaaaagtaggcggcaaacgctatttcgcatctctcaaac
aaattgcttgttgtcacgtgattccTTTGGttggaaatcctaccaaaact
tgcttcacttttcgataaaggccgcggATCTAATGAAGCCAATCTAATGA
AGCCACCATtggtttttttcatttaatatACAAACAGAGGCTGGACGAAT
CTCTTCaactcaaaataaatttttgaaaattatgtggataccccctgaaa
aaattacagaaatttcatttcaacccaggaaaaaatgaaaaaagacttCC
CTTAGACCCTCTGCGAACTGTTCTAGGAATTCTTAATGCAACGAACGTAT
TTAAAAGTCTCATTTTCTATTGTCTGGGAAAATTGAAAGAATCCCCCTTA
GGGGCTTCAAACTTATTGTACCTGTCCTGTAGAAACCTTTTTCACAATAT
CTTTTTAGTCGTTCTTTTCAAAATTGACAAACCTTTTATTTTTCCAGGCA
GCACTTGAACAATTCGGATTTGTGCCCACTTCTTTGTGACGTCACACAAT
TCCGATCACCACGTGACCTTTCTGATTATGTCATCCATAATGACGTCACT
TGTCTCATTGTTATTCATGCGTACAGAgctggaaaatttttaaacggTTT
GGAAATTGTATTACTAAACTTACAGTGCGGTGTTAAactgggcttttcca
gaaaaaccgTTCAAAAGTGGAAGATATAATATTGTCAAAGGGAACAAAAA
AAGACTGTCAAGCACCTCCTTTTTAAACAGCTTGATCTGAAAATTTTCCA
CATGTAAATTTGATCAGCATTCTGGTGGTCCACCAATGTTATCTGATGTA
GGCGGTGAGTGACTAGGAGCTGAGGGTTGGTGTGGCAATCCACTTAAGTA
TTCAATCTTCCACAGGGCTAGTGCACATAGAAAAGGATATAGACTCCCTG
ACTTCCACGGCCAACACTTACATACTTACTTCAAACACCTTTCAGACATC
AGTATACCATTTGCGTTGGTATTTGGTGGAACTGACGTTCAATGTTCATC
CTGGAATGATCAAGAAAATGCAATCATGGCTGATGTTGTTGCCAAGGCAA
TGTGAGTTAAAACCCTAGAAactcaaaaaatctttatttctgTTGCCAAG
GGTAACGAAGGCCAAGGAATCATTTGCATTTGCTAATGATAATAAGGCTC
AAGCTTAAGCATTTATATAGCTGGTACAGAGAAAATTTGactattttcat
gaaatttccaACGACGGAAAACAACATTACCTGAAGTGTAACGGAGCTTA
ACCTTCGATAAGCATGTTTTCCCATTGTGTTTCATGCCGAAAGCATGTGG
CAAATCTTTAAACCTTTCCCAAGTTTTACATTTACTTTgcgttttatatt
tttcaaattctggtGGTAAATGTTACTTTCAATCTATTGTTTGTATGGAT
TTTTCGTCGCCGTTAGGTAGGTCCGATCAACATctagtttgtttttttgt
ttcgacGGTTTCACTTTCACGAGTCTCACTTTATCTACACCTTTTCTTTT
AGAGTTCTGATCGCGTTTTCAGAAGTCATGAAAGAAGCAGCATCGGTCAA
ATGGGTAGTGTATTTGTACATCCATCTTTGAATGACATATTTTTTCTCAT
AGAAGACGCTACTCGTATATGATTTGTTAAACTAGCCTATTTTCGGTAGC
TTTTacttcaactttttaaatttcgatacACGTTttataataagaaaaaa
ctatataatgAGCATCCTTATATGCTgtggctaaaatattaagaacaagc
taaggaCATTCTGAGGAtctgcagactctaaaacactaaatttttaagaa
attgcacaaaatggtgaaattaagaacattaaaaaaaaattaggcttaaa
actttGAGAAtatccgaaggtttcaaaaactgtttttattAGTAAAAGAA
AACGTATATTTCACTAAATTCAGTTTTCATCGGTAATTTCTTCTTCGTTC
TTCTTTTAGCCATCAATCttgaaagagaaaaagatatTTGTACAACCGCA
AGGTAAAAGTCATTCCTCCCTTTTTCGCTCCGTGCATCTTAAACCACCGT
GTTAGTGCGATTGAACTCCTATTTGCAGTTCTCATCAAGTGTAATCCGCT
TGGGTGTCAGATTTTGATTAGTTTGTAATgcaaagttgtattttttttcg
TTGTCAGGTGTGACAATTGAGAGGATAGGACCGACAAATTATTCGTTTCA
ACATCTATTCAATGATAATGGGATGGTGAGTTTGAACTTTGTCTCTCTCG
ATGATGGATTGTTACTTGTCAAGTACCATTAGCAAGTTCTAGACGCGGGA
CATTATAGCCTCTATAATGAGAAAATCAATTCATTATTTCCTGTTCTTTC
TCTGCAGAGCGatgttaaaacaaaagaaaaggtaCCGATTTTCAATTGAT
CTATCTTGACTGAAGTTATCACAtattggacttttccagaaaaaaacctg
ttgaggaggtccatccctctttggctggaaatgctgtaacctGCTGTAAC
CCCCTAGAATttcaggcaatttcaggtttaaacccttctggaattctgaa
ttttagtaggatttaaaaagctacccccatggaattccagtcaTTTTTGA
CAGATTTNCTTTTTCCATACCTTATCTGTATTCGATCTTTTCATCTATTG
GAATAAACACGAGCTTTTATTATTAACCTGATCAACCTATTTAGTTTTAG
TAATTACAATTACATGTACTAGACATTTTGATTGATAGCGGAAATACCAG
CAGCTTTACTCTTCAAGTTACTCAATAACGACTATAggagatttgaaatt
ttattttgtagatTCAATATAATGTATATTTTTCACATGAGAGAAGATTG
AGGGAAAGGCTATGTGATTCCAACCAAAagacccctgtgtcacagacccg
ctgaggCCTTAGCCCCagtggaaaatttggcaaaaatttcgttcccggtg
ggaaaaatttcctaaattccagccccactgagaaattgactttgatttca
tccccattcgaaattcatcgTTCATGCAAATTGcaatccaaaaccatccc
cactggatttggaacaaaataaatttttatccccgctgtaagaaaaagtt
tcaccggggctgtgagacaggggtgtaccaAACAAGACAGCCAAATCTTT
CTTGACGATCTTACTTCTCTTTTCTCTAATCTCTCATGGGAGTAATCAAt
gtaataattatttttttgtatgtTTACTATATTATTGTTTATTATGAATT
TATGAAGAATACTTttcgttttttgtttgttttctttgatttacaAAATT
GAAAGATATTTGAGGGGAAAGCTAAACATTCTTAATTAAAGAGAATtgac
tacatgtttttttttctataagcataacgtttataagcatatacaggCTC
AGTTATTGGTTCCCTAAACAAtagctctattgtttaagaacaatagaatg
gtAAGCGTAATGtgagcctgatataggggtagacaattgcttataaaaaa
acatgtatggtGATTTTATAATACATACTTCAACATGGCCTTTTTGGGCC
TGAACCTGAACCTTTGTAAATTGAAgtataatgttttttttgcatCATAA
TCTGCTTGTtcctgttttcttctttttcattttagcaaatgaaaaattga
taaaaagtaattaaaaagcAACCACAAGCCGCTATTACCAGCGCATAGAC
AACATCATAAATCAATTATAATTGTCGTTGccagagaaaaataatttcct
aCCAATATCTTCTGGTATTTGTAGTAAGACGTGATTCCCAATCAGAGTGG
ATTTGCATTACAATTATCGATGATCCGATGTAcgtattttgttatttttt
tataatgtccAAATACACCTATCCGCAGACAAGtgtttcgtccttcccag
gactcatcAGTGCGACTTgggtaagcgagcatagactgctgttgtcgcac
cagagtgctcaaaacactaagTGTTGAGCTTCGCGTAATCGCTTGTGGTG
AACGGAGAAGCAGAGCTTGCTCCTCAACAGAGTCTATAGAGTGCTTAATA
CATGTCCAAATATACAGTTGCTCCGATTCATTCGATCTACAAGGGGACca
aaattttgtgttaaaagaTTCAAATCACAGAGAATATTTTTTAAGACATT
CCAGTGGAAGGACTAAATTTAATGTTTGATTTAGAATTACAGaggctcga
attagagagacaGGTTGGCTGTAATGTTCAACTTTTGTatttaaaataat
cataatttttattttttattttttaagaatgAAGGAGATTACTTGACATG
CCAACCAACATATTGATTCTAGCGAAATTGGGTGCTGGTACTGGCAACAG
AACCACTGCTGAACGTATCAGGtgcttatttatttattttaaagcGACGG
GAAGAGTGGGCCTGTAAGGAATTTTTTTGGATGGGGTATGAACACAGatc
tataaagcccgaagggataagtcaactttaagctttctccagcaaaagtt
ttcggagcgcgagatcaaaaaaagtaggcagcaaacgctatttcgcatct
ctcaaacaaATTGcctgttgtcacgtgatttctttggtaggaaatcctac
caaaacttgcttcacttttcgatgaAGGCCGCGGATCTAATGAAGCCACC
ATtggtttttttcatttaatatACAAACAGAGGCTGGACGAATCTCTTCa
actcaaaataaatttttgaaaattatgtggataccccctgaaaaaattac
agaaatttcatttcaacccaggaaaaaatgaaaaaagacttCCCTTAGAC
CCTCTGNTGGAAAAATGAcagaaatttcatttcaacccaggaaaaaagaa
gaaaaaaaacttcccTTAGACCCTCTGCGAACTGTTCTAGGAATTCTTAA
TGCAACGAACGTATTAAAGTCTCATTTTCTATTGTCTGGGAAAATTGAAA
GAACCCCCCTTAGGGGCTTCAGAGTTATTGTACCTGTCCTGTAAAAACCT
TTTTCACAATATCTTTTTAGTCGTTCTTTTCAAAATTGACAAACCTTTTA
TTTTTCCAGGCAGCACTTGAACAATTCGGACTTGTGCACACTTCTTTGTG
ACGTCACACAATTCCAATCACCACGTGACCTTTCTGATTATGTCATTCAT
AATGACGTCACTTGTCTCATTGTTATTCATGCGTACAGAgctggaaaatt
tttaaacggTTTGGAAATTGTATTACTAAACTTACAGTGCGTTGTTAAac
tgggcttttccagaaaaaccgTTCAAAAGTGGAAGATATATTGTCAAAGG
GAACAAAAAAAGACTGTCAAGCACCTCCTTTTTAAACAACTTgatctgaa
aatttttccacATGTAAATTTGATCAGCATTCTGGTGGTCCACCAATGTT
ATCTGATGTAGGCGGTGAGTGACTAGGAGCTGAGGGTTGATGTGGCAATC
CACTTAAGTATTCAATCTTCCACAGGGCTAGTGCACATAGAAAAGGATAT
AGACTCCCTGACTTCCACGGCCAACACTTACATACTTACTTCAAACACCT
TTCAGACATCAGTATACCATTTGCGTTGGTATTTGGTGGAACTGACGTTC
AATGTTCATCCTGGAATGATCAAGAAAATGCAATCATGGCTGACGTTGTT
GCCAAGGCAATGTGAGTTAAAACCCTAGAAactcaaaaaatctttatttc
tgTTGCCAAGGGTAACCAAGGCCAAGGAATCATTTGCATTTGCTAATGAT
AATAAGGCTCAAGCTTAAGCATTTATATAGCTGGTACAGAGAAAATTTGa
ctattttcatgaaatttccaACGACGGAAAACAACATTACCTGAAGTGTA
ACGGAGCTTAACCTTCGATAAGCATGTTTTCCCATTGTGTTTCATGCCGA
AAACATGTGGCAAATCTTTAAACCTTTCCCAAGTTTTACATTTACTTTgc
gttttatatttttcaaattctggtGGTAAATGTTACTTTCAATCTATTGT
TTGTATGGATTTTTCGTCGCCGTTAGGTAGGTCCGATCAACAtctagttt
gttttttttgtttcgacGGTTTCACTTTCACGAGTCTCACTTTATCATTT
ATACCTTTTCTTTTAGAGTTCTGATCGCGTTTTCAGAAGTCATGAAAGAA
GCAGCATCGGTCAAATGGGTAGTGTATTTGTACATCTATCTTTGAGTGAC
ATATTTTTTCTCATAGAAGACGCTACTCGTATATGATTTGTTTAAACTAA
CCTATTTTCGGTAGCTTTTACTTCAACTTATTAAAATTCGAATcacgttt
tttataataagaaaaaattatataagAGCATCCTTATATGCTgtggctaa
aatattaagaacaagctaagaacattctGAGGAtctgcagactctaaaac
actaaatttttaagaaattgcacaaaatggtgaaattaagaacatttaaa
aaaaattaggcttaaaactttGAGAAtatccgaaggtttcaaaaactgtt
tttattaaaagaaaacgTATATTTCACTAAATTCAGTTTTCATGAAAGGT
aatttcttcttcattcttctttcAGCCATCGATCTTGAAAGAGAAGAAGA
TATTTGTACAGCCGCAAGGTGAAAGTCACTCCTTCTTTCTTGCTCCATGC
ATGTTAAACCACCATGTTGTTCTAAATTTTTATTCTATATCCTCAGGAAA
ACATGCAATTGGCCTTTTACAGTTTCTCATCAAGTGTAATCCGCCGGCGT
gcgaattgagggggccaaaaaatatgttgcccaccatggttgggcgaaga
agaaaattttcgacttttcacccttatttcacccctctaaacggtacata
taagattttttaaagtaaaaaaaaattatgcccCCACCCCCCTGGTGACT
GGGTTTTGATTTGTTTGTAGTAATgcaaagttgtattttttttcgTTGTC
AGGTGTGACGATTGAGAAGATAGGACCAACAAATTATTCGTTTCAACATC
TATTCAATGATAATGGGATGGTGAGTTTGAACTTTGTCTCTCGATGATGG
ATTTTTACTTGTCAAGTACCTTTAGCAAGTTCTGGACAAGTACGGCATGG
TaacctttttaatgaaaaaatccaTTCTTTCTTTGCAGAGCGaagttaaa
acaaaagaaaaggtatagattttcaattattttaccTGACTGAAGTTATC
ACTTTTAAAGATACTTTATTCTCTGTGTTGGAGCGGATTAGGACTGTACA
TAGTTTGACCCCTCCCCCTTTCTCCGCAATCTTTTAAAGGTTGGGAGGTT
GCCAAGAATGGGGGAGTCATTTAAGAAGGAGGGAAATcggacccctttcc
gcactatgactGCAAGCCTCGAAATTGTGATAAAGATTTGGAATTTGCAC
AGACACTCTTCTATAGGTCATTTCTCAGTCGCAAACCGTAATGGTTAATC
AGAACATATCAGGGCCAgtgcgcgctaatgacgacttactatggtctaaa
gttttgaaattttttaaagattattgcATCTAGCCAAACAGAAAGCcgtt
atggaggcgcaatcagtcctgattacccatgatccagttcgactgtgaaa
tggtctATGGAGAAAACGAATATATTTTAGAGACTCTTTAAAAGATGTTT
GTTGACaaagaattatttatttttgaacgTTTTTTTCTCTCGAATAGTTC
GATTTTTTTCATCACTTCAGATAATTTTCCTGTTTGTGGGTGGTATTAGA
CCGGTGAAAGATCCTTTGTTCCTGATTTATACTTTTGCTCGTAAGTGAGT
TTATAATTATATATTTTCTAATAAGAGCAGTGTCCTCTTTTACTTAGATT
ACCCCGCCCCTCACCGTACCCTTTAAATTAACTACTTACACTAAGTACAt
taattatcatttttcaagtcttgaaaaagttgaacCATGGAATATTTTAC
CTTTAAGATAAAGAATATTTGATGTAAACTGTAGGGTCCAATCCGTCAAA
ATCAGATTGTTGAATTTGTTGGGGAATATTAAAAAAGCATTGTCACTAAT
AAGGTGCTGCCTTTATTCTGAAACCGCCGGACTCTacttctttatacctc
tataaGTTTTGCCCTAATGAGTtttcataatttatgcaaaaatattcaaa
tcatGATAATTATTCAGGAAGAACCCCCATCGACTGAAAGAAAACACTAA
AAAAAGAGACTGAAGAggcagaatttaaaaaaagtgaacaaaGGGACTGG
GATGGAGTTTGATTTATTTATAATTCTTTGTTCAGAGATGCATGAAGAGA
ATGATCGAATCCTGTTTGTCATCATCGGGCCCATACTGGATGAAGAATAT
GCTCGCAAATGTCGTCTCGCTACATCAAAGTAAGAATGTCATACAGTGGA
AAGTGAATTCTTGGTGTTTCTCATGTGGACAGTTTTGTTTAACATTCGGT
TTTGTGATAAGCATTTTAATTGGAATTTTGActtaactttgctttttgat
catttttgacGACCCTGAGTAGACTAAGGCCGCTTAATCGCACCATCCGG
TCTAGTTAGAACATAGACGTCATATCAAATTGCAAAATCCCAAGTCTATT
AAAAAGCTGTAAGTAGACCCCGGGCTAGTTGATTGGTAGATTTGTTTTAG
TTGTTTTCATTGGACCTAAAAATCACTTCAATCTCATTTTCTCTCTTAAA
ACACTTGTCTCATCTATAATTCTAGttatcattttgtttttttgcagaCT
GAAAGGGATATACATGTTTGATCAAATATCACGTGATAAAGTTCATGCTT
TGATACACCAATCTGTTGCTTTGGTCAATTCCTCCATCGAAGAAGGCATG
GCTGGAGCCATTCTTGAGGTAATGGTTTCACGAATCTCGATGCACTATTA
TAGGATTGCAAACACACAATTTTAATTCTCACCGCCAAAAGTGCTCAACG
AAAGCTCAAAACGttgaaatcattaaaaaaatagaCATGTGTGACTTTAG
GAACTTAAAGTTTCTTGCCGTCCTTATGAACGACAATCATtaaccaaaaa
taaaatcttaaatacaaaatttggacaaaaaggATTACAAGTAAGAACAA
ACAAAAAGTATTTGGTGGTCATAATAAGCTCAGTCCTCCAGGCACTAATT
CGTGCACGTGATATTTTCGGAAAGATGCCCAAACCACAAAATAGGATGTT
TGATATCTGACCCTTCGATTACTTAAAACTTgttttacattttaaatttt
tttttcagtcaatgaAAATAGAGACACCAGTTGTTGTTCGGAATAACCGT
GGAAACGCATCCATTGTGCAGCATCAATCCACTGGATTGCTTTTCCAACA
CCCACAAGTAGGCTCATTTTTACATTACAGATTGGACTTTCTACACTCGA
TTCGAAACTTAAGATTTAAAATTAGATAAGGAATTTTAATTGAACCCACA
CGGAAGTNAATTGGACACTTAAGATTTGAAATTAGATATGGAATTTTAAC
CGAATCTACACGGAAGTCATTTGACTGATCATGATCTGTGTATTTCGCCC
TTGTGCTTTACTTGGgaaaatttaaaagatattctttgaaagATCACAGA
GCTGTGAATCGTCGTGATTCTCTTTCACATGGATGTTgaactcaaaaatt
atcaactatCTTTTCTTCAACTTTAGTGCTGAATTTAATTGTATTACGGC
CACTTTATTTATCGAAATGCAAGGTCTTTCATTATCCCATAGCAACAGGT
CATTCATTCTGTGTAAGTGTGGAACAATCAGAAACTGCTTTGAGATTAGG
TCTCTCTTGAGTTACGTCAACCTTTTTGTTTNAGAAACTGCTTTGAGATT
AAGTCTCTCTTGAGTTACGtaaacctttttgtttcatctGGAAACAGACC
TTCAATCTTTAGGCCAACGTACCTCTAAGAAATTCCGTTGGAAATAAATT
GTCATAATATATTTCGAAAATGAGGTGCGAATTGTTCACGGcttgatttc
taaaaaaggcCTATACAGTATCTTTCGAAAATTCATAAAAgtctctctct
ttttttttaggattttagagaGCAAGCCAATCTTCTTTTGGAAAACTCAA
CCCTGCGTAGAAACCTCATTCAAAACGCACAAGATTTCATCGAGTCCAAT
CACAACCCTGATGTTGAACGTTCTACCTATcacgaaattatcaaaattct
tGTCAAACCGTAGTAATTaacaaatacacgtttttttataagagaatcca
aaatttttgaagcctttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010638XLOC_010638Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018976-exon-sc0000314-1491911889:191799..191976TCONS_00018976-exon-sc0000314-1491911889:191799..191976Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:191799..191976TCONS_00018976-exon-sc0000314-1510915933:191799..191976Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:191799..191976TCONS_00018976-exon-sc0000314-1575043694:191799..191976Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:194819..194912TCONS_00018976-exon-sc0000314-1491911889:194819..194912Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:194819..194912TCONS_00018976-exon-sc0000314-1510915933:194819..194912Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:194819..194912TCONS_00018976-exon-sc0000314-1575043694:194819..194912Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:195546..195694TCONS_00018976-exon-sc0000314-1491911889:195546..195694Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:195546..195694TCONS_00018976-exon-sc0000314-1510915933:195546..195694Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:195546..195694TCONS_00018976-exon-sc0000314-1575043694:195546..195694Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:200654..200759TCONS_00018976-exon-sc0000314-1491911889:200654..200759Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:200654..200759TCONS_00018976-exon-sc0000314-1510915933:200654..200759Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:200654..200759TCONS_00018976-exon-sc0000314-1575043694:200654..200759Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:201215..201266TCONS_00018976-exon-sc0000314-1491911889:201215..201266Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:201215..201266TCONS_00018976-exon-sc0000314-1510915933:201215..201266Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:201215..201266TCONS_00018976-exon-sc0000314-1575043694:201215..201266Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:201674..201716TCONS_00018976-exon-sc0000314-1491911889:201674..201716Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:201674..201716TCONS_00018976-exon-sc0000314-1510915933:201674..201716Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:201674..201716TCONS_00018976-exon-sc0000314-1575043694:201674..201716Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:202051..202118TCONS_00018976-exon-sc0000314-1491911889:202051..202118Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:202051..202118TCONS_00018976-exon-sc0000314-1510915933:202051..202118Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:202051..202118TCONS_00018976-exon-sc0000314-1575043694:202051..202118Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:202237..202260TCONS_00018976-exon-sc0000314-1491911889:202237..202260Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:202237..202260TCONS_00018976-exon-sc0000314-1510915933:202237..202260Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:202237..202260TCONS_00018976-exon-sc0000314-1575043694:202237..202260Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:202819..202888TCONS_00018976-exon-sc0000314-1491911889:202819..202888Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:202819..202888TCONS_00018976-exon-sc0000314-1510915933:202819..202888Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:202819..202888TCONS_00018976-exon-sc0000314-1575043694:202819..202888Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:203384..203477TCONS_00018976-exon-sc0000314-1491911889:203384..203477Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:203384..203477TCONS_00018976-exon-sc0000314-1510915933:203384..203477Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:203384..203477TCONS_00018976-exon-sc0000314-1575043694:203384..203477Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:203846..203966TCONS_00018976-exon-sc0000314-1491911889:203846..203966Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:203846..203966TCONS_00018976-exon-sc0000314-1510915933:203846..203966Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:203846..203966TCONS_00018976-exon-sc0000314-1575043694:203846..203966Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:204357..204455TCONS_00018976-exon-sc0000314-1491911889:204357..204455Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:204357..204455TCONS_00018976-exon-sc0000314-1510915933:204357..204455Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:204357..204455TCONS_00018976-exon-sc0000314-1575043694:204357..204455Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1491911889:205159..205366TCONS_00018976-exon-sc0000314-1491911889:205159..205366Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1510915933:205159..205366TCONS_00018976-exon-sc0000314-1510915933:205159..205366Clytia hemisphaericaexon
TCONS_00018976-exon-sc0000314-1575043694:205159..205366TCONS_00018976-exon-sc0000314-1575043694:205159..205366Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000314supercontigsc0000314:191799..205366 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00018976 vs. Swiss-Prot (Human)
Match: GL1D1 (Glycosyltransferase 1 domain-containing protein 1 OS=Homo sapiens GN=GLT1D1 PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 1.454e-72
Identity = 117/343 (34.11%), Postives = 196/343 (57.14%), Query Frame = 1 
Query:  211 ILILAKLGAGTGNRTTAERIRQHLNNSDLCPLLCDVTQFRSPRDLSDYVIHNDVTCLIVIHAYRAGKFLNDISIPFALVFGGTDVQCSSWNDQENAIMADVVAKAIVLIAFSEVMKEAASVKWPSILKEKKIFVQPQGVTIEKIGPTNYSFQHLFNDNGMSEVKTKEKIIFLFVGGIRPVKDPLFLIYTFAQMHEENDRILFVIIGPILDEEYARKCRLATSKLKGIYMFDQISRDKVHALIHQSVALVNSSIEEGMAGAILESMKIETPVVVRNNRGNASIVQHQSTGLLFQHPQDFREQANLLLENSTLRRNLIQNAQDFIESNHNPDVERSTYHEIIKIL 1239
            +L LA L   TGN  TA+R+R HL  +    +L D   F S  ++++ ++  +    + +H YR G+ L    IPF ++FGGTDV   +   ++N +M  V+ +A   +AF+E MKE A  +WP    + K++VQ QG+        N++    F              IFL + G+R VKDPL+L+  F+  H+E   +  VI+GP +D  + R+ +    +  G+ +  ++ ++ +HA++    A+VNSS+ EGM+ AILE+M +E PV+ RN  GNA++V+H+ TGLLF +PQ+F   A  L+ +  L + ++ N ++++   H+  VER TY ++I+ L
Sbjct:    3 LLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEIANLILAENCEAALALHLYRGGRLLQGHRIPFGVIFGGTDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEMAQAQWPH--AKGKVYVQSQGIATTPNAAFNWN---TFLQRSEINQSADNLHIFLLICGLRQVKDPLYLVDAFSAWHQEEPNVHLVIVGPEVDPVFTREVKAKVKRAAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILEAMDLEVPVLARNIPGNAAVVKHEVTGLLFSNPQEFVHLAKRLVSDPALEKEIVVNGREYVRMYHSWQVERDTYQQLIRKL 340
The following BLAST results are available for this feature:
BLAST of TCONS_00018976 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GL1D11.454e-7234.11Glycosyltransferase 1 domain-containing protein 1 ... [more]
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