TCONS_00018920 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00018920
Unique Name	TCONS_00018920
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1573

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000313:174087..185184+

transcript sequence

>TCONS_00018920 ID=TCONS_00018920|Name=TCONS_00018920|organism=Clytia hemisphaerica|type=transcript|length=1573bp
GGCAGAAAGCACTATATGAACTTGGTTTGACTGGCATTCCAATCTTCAAC
ACCAACAATAACTGCTCATCAGCATCCTGTGCTTTAATGTTGAGTCGTCT
CTTGGTGATGAGCGGTGAATATTCCTGTGTTCTGGCTCTTGGATTTGAGA
AAATGGATTCAGGATTGACAGTGAAATGGGATGATCGAATACATCCATCT
CAACGACATTTTGATCGTATGGAAGAATGTGGTGTACCGAAAGGCTCTGT
TACTCCAACCCTGTCTCATTTTACTTCGGAAGTTATGAAGATATACGCTT
ACAGTGCTCGCGAGCATGAGAAGCGGTATGGGACAACCAAAGAACACTCT
GCTAAAATCGCATACAAGAACCACTTCCACAGTCAATACAACCCCAATGC
TTCCTTACAAAAAGTTTTACCCATGGAAGCAATAAACGCTCGTGAAATCG
TTTATCCGCTCACGCTCGCCATGTGCGCTCTGACGGCCGACGGTGGTGCA
GCGGCCGTGGTGTGTAATAAGGATTTCATGATCAAGCATAAACTACAAAA
CAAAGCGGTAGAAATCATAGCTCAACAAATGACCACCGACCTTCCTTCAT
CTTTCAATACTGATGTCACCAATGTTGGTGGATTGGAAATGGCGCGTCAA
GCTGCCAATTATTGCTATGAAAAATCAGGGTATACGGCGCGCGATGTTGA
TGTTATTGAGTTACATGATTGCTTCGCCCCAACTGAGTTACTTCTGTATG
AAGCACTTGGTTTGTGTGAAACTGGCAAAGCTGGAGAATTGATCGATAAC
GCGAAATGGATTGAGAATAAACAAGGTGGTAAACTTTGTCAACTCGGTAA
CAAATGGGTGGTGAACACAGATGGTGGATTAGAATCTAAAGGTCATCCAA
TTGGTGCTACTGGTATCGCACAATGCGCCGAAATTGTATATCAGCTTCGT
GGTGAGGCTGGCAAGCGTCAAGTGGAAGGAGCTCAGATTGGTTTGCAACA
TAATTTTGGAATCGGTGGTGCTGCAGTAGTCACTATGTACAGAAGGATAG
GCGTACGCCCGTCAAAACTTTAAGGAAGTTGTTGATGGATTAAACTATGA
GGGTAGGGGTTGCAATAAGAGCACTGTTAAGATAACTTTACCGAAAAGCT
CTTGTAAAGAAATGTTTAACGTAGGGACACTTTTTCAGCAACAAATCATA
TTAAAGAGGTGTCGTTAAAACATTTGATTTGTCCCTTTTTTCAGTGTCAT
TTTTGGGTTCGTTGGACCGCTTTATTCAAATCTATCTTTTACTCTGCCAG
TTTAAGTTCTCGATAAAAAATTACCGACAACCAAAAGAATCGCTCAAACA
TAAAACTAAATTCAGCTTTGcaattatgtacaaaatatTATGTTCTCTTG
AAAATTAGGCTAGTAGGCCAAGGAATTAAGAATTCCTAATTTAAAGATAC
ACTGAAGCCTAAACTTTTAGGTCGCCTTTATTGTGTAATTTATAAAGAAT
TAATTTTGCTATTTTGTATAAATatagaatttttaaaagataatAAAAAT
AAGACGAGGAATTTTAATGACGA

Run BLAST on NCBI

transcript from alignment at sc0000313:174087..185184+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00018920 ID=TCONS_00018920|Name=TCONS_00018920|organism=Clytia hemisphaerica|type=transcript|length=11098bp|location=Sequence derived from alignment at sc0000313:174087..185184+ (Clytia hemisphaerica)
GGCAGAAAGCACTATATGGTAAGATAATCGATTATGAACTTTTTTCTATC
AATCTCGATCACATAATCAGAATATTTTGAATGGAATATCGACCATTAAC
TTTTCGTATAGAAACTCAAGTTAACCTATCTAGTCAAGCTAGATTTTAAT
TGTTTGATCTCTTATCAAACTTTATGTTCTTATTATTCAGAAACTCTACA
AAAGTAGACCTAAAATTTAAGCATTAAGGCAACATAGAAAGAATTCTTTC
CCCCCCTTAGgctcattataaaaagaatTGACTTGGAATCTAATTTCTGT
TTCATCAGAACTTGGTTTGACTGGCATTCCAATCTTCAACACCAACAATA
ACTGCTCATCAGCATCCTGTGCTTTAATGTTGAGTCGTCTCTTGGTGATG
AGCGGTGAATATTCCTGTGTTCTGGCTCTTGGTAAGAATCTTATCAAGAT
ATTTTCAGATGTTACCATAACCCTCACATATACCTAAAATGTTCCTCAAA
ATAACTGGAGTagaaattttctgaaatctcAGAGGGTACCCTCTACATCA
GGGGGTACCAAAATGTCCTTGATTAGATCCTGGGGGGCTTAGGAAATCTT
CATTAAATCACAGCAACAATCTAAGAAATTCTATCTATGTATCTCATCTA
TCGACGTGTGAGTAATCTCAATTTCTTACCGCCCCAATACTtttacagtg
ccgtagcaactgggggggcaagggggggctatgcccccccccaataattt
tttcaaaaatggttattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNCaattgagtgtatttttaagca
atctagagctcaaattttcaaaatttcccccctcgggccaaaccatggtt
ggccctcgcggtgtcactaaacttcaccccccccaatatgaaaatgcttc
ctacggcactgttttATCAAGTGACTAAAAAGCAACGaacaaacaaaaat
atattcatCTAATTTAGAAATGATCATTTGTTCCAGAACAAATCTTTACC
ATCATTCTGTACCAGAAATGTGGGTGAGACTCAAAAGTCTAGGGGGTTCT
GCCCCTCCCTCCCTTTAGAAAAGGTGGGATTTGCACTTTGAATTGCTATA
ATTGGGATTCCCGTCCctgtgtattccaggctttatttgcGTTACTGATA
GGAGAGGACATTTAGTCTATCGCACACGGCCGTATGGGGGAGACATTGTA
CTTGATAGGAGTAAAAGtgataatattttttgaaaaatctgatcTTGTTA
AATTCAAACATAATAGTTTTTTTGCAGCCTTGACTTTTTTACCCATTGTA
GCTAGATATTTCCTGGGgcattcagaaaaaaatattttccataaaaTCTT
TCTCGTTTGACTGCATGAgaaagttttgttttaaattgctGACCTCCAAT
CAAAGAAAAATGCTTTCGAAATAATTTTGTACTAAACTCGGTTGTGTTTC
ATCGGGGATAAAATTACAATTAGGTAAAAAATCTTGGCATAATTAAGAAT
ATAATAATATCGTAAAATCAATTCCATATGTTATATTAGATCAGAACGAT
TTTCCGTGTATTTTCCAAGCCAGTAAGAAATTTGCTAATATCGTGACCTT
AGGAAAATTAATTTTGCACTTGTATCTCACACTTCAAACGATAAAAGATC
TTCGAGAGTAAAATAGAGTGGTGTTTTTCTTGATAATAGTTTCTCAAAAC
CTACATCATGCATTTTTCAAACGAGTACTTGTTCCTATTTCTTGTTAGTG
TTTCTGATAtaaagatctctaaattcagATCCTAGCTATGTCTCCTTATT
CATTTTAGTAAATCGAAAGTGtaacaatttcataattatgATTGTTTATT
TTAAATGATCATACAATCATCCAAACATGAACTGTGAGTTTATTTAGAAA
AATCCAAACAAGAgagtaagtgtttattttgcagAAGTATGATTTCTGTG
TTCCAATTTCACCACTAGTCCATTTTCCGATTTGTGAATAATCTCAAAAC
ATTCAGCAACATCTTCCTCCTTTTGTACCGAAACAACTTTATACTTCAAC
ATCACGTGATACAATAAAATCTTCTCATTCAACATCGCAAATTTTTGCCC
AATACAATTTCTCGGACCAGCTGAAAATGGGACGTAACAATACGGGTTAC
GTTTAGCGAATTTTTCTTCAGCAAATCGGTCTGGGTTGAATTTCATTGGT
TCGTCCCAGTACTCTGGATTGGTGTGCAGAGCGTGTGCATCGATCACCAG
TTGGGTTCCCTTTGGCATGGAGACTCCACAAATTTTACTATCTTTCTCCA
ACTTGCGAGCGTATATCAAAACAGGTGGATGTAAACGTAATCCTTCTTTA
ATAACATGCTCCAAGTACTTGATACCTCTTATCCTTTCAACTAAATCACC
AGCCTTATCAGCTACTTGGTCAATCTCCTCATGTAGCTTTTGTTGGATGT
CAGGATACAAACCAAGCATGTATAAAATCCAACTTAACCCTGATGCGGTT
GTATCATGGCCTTCAAACATGAATGTATCCACCTCTTCTCGGATCCCTTC
AATGTCTATTTCCCCTTTCTCATATAGGTCCAGTAACATGTCCATAAAAG
CTTTAGCTTTCCTTGGTTCGCTGGTTGGGTCTTGGCTTCTCTCTTTGATA
TTATTGTTAATCACATTAGTTGTAAATCCGTGTAAAATGTTCAATTTCTC
ACGGAAAAGTTTTCCATTTCCAGTATTCCAATAGACCATATCAGGCCATA
ACCAGGGATATTTTTGCCGTTCTTGCAAAAGTTTGTTGCCAGCATTGATA
GCATTCACATATTCCGAATCAGCATCTTTTTGAGCATTGACAGTAACACC
CATAGCTGTCTCACATATGGTATCCAAAGTGGCAAGGCTGACGGGTATTT
GTACGTCGAACGGAATCGCTTTATCGGCATACGATTTCAATTTATGTGCT
AAAACCTCAGCTTGTTTCAcaaagatattttgaaattcatttaaaatatt
gaaatggaatGAAGGTGTTATCGCTCGACGCCTTGTTTTCCATTTTTGAT
GTGTAGAAGTTAACAGACCAGTGCTAAGCCATGGTTGTATACAATCATAA
ACAATTGATTTGGATAGAATCTCTTGACTTTTAAGGACAGCTTCAGCCAT
CTCAACCTTGCCTATCCATATGAAAGGATACCAGCACAAccaaacaacaa
acaaataACCATTCTCAGGGATCCACTTTCTGATTTGTTTATAAAATTTA
GGGCCGTCTGTCTCCACATGGAGACACGACCCAATGACAGGGAAAGAATG
TGGCAACGCTTTGATACCCACAATCTGAGCAATTCTGATTCGCCATATAA
TGTATAATGTTGCCAATAGGAGTGCAAGGAATGTTGCAAAGTATATCAAC
ATCGTAACTATCGCTGCTGTTTTTTTTGATATTCTGAAAAAATAGGAAGT
GTAAGATTATATGttaaggtttaaaattttaacaCGAAAATAGAGGCATA
GATATGCTCTCGTTTAATTCAAGAATTCTCATCCTCGCAtgtcatttata
aaatataaagacAAGTCGCAGAAATACAAAACTACATACACTGTTGTTCT
ACATAATCTACATGTATAAAAACTTAAACCATAAGAGCATAGGAAGAGCT
TTGACTGTTTGAAGTAATATGATCTTAAAACATCACTCTTATACTTAGAT
ATAAGACGTCCACAGTAGAGGAAAATAATGCAATTTTCCTGCTTCTGTCA
ACAGAGATTTTTAATAATGATGTTTGTCTTCGTCTTTTACCCCTATAATA
GCACAAATTATTAATGATAATAAAGCAAAAGTCTTCGTTGCGTCATAGTT
AGGTGATGCCATTTAATTGATTTTCCTGTGCGACTTCTTAGCGAAAACTT
AGTTTCTACTCACTAAAGCAGAAAACTGAGAAAGATAGCATTAGCCTTGA
ACTTTGTAATAATAATATTCATCTCTTTTAACTAGAAGATCGTTTTTGAC
CAACGGagtaaaatactaaaaaaaaaaacaaagaaaagtcttttcaacaa
gcacattCTATTTGTAGAAgtaaagggctacttagactacacaataataa
gatttgctctaaatattgACCTTGCTCGGACCAGCTCAATTTatagcatt
attttttctctaaaagTCTCTTCGAGAATTAAGAATGAAACAGACACTAG
CCAGACAGTCTTTAGATTTGTTTTGCGGGGTCCTATCTATAAACTGAACG
GAACATATAGAATTGAGCAGGAGACCACTGGTTAGGCTCTGGCGCCTTGA
ACACTCGACGATAGCTCCTGACGAGGTGCCCTCGAAAGACATTGAAAATT
CAAGAGATTGGGGTATTTCTCAAACACGTATTTACCAAAAACTCgattta
aagtctgtccagatataattggcagtggaaacaagaatgcctgtaacttt
tgatagtcaaatataattatggaatttttatttgcttgtgtcagagaatc
aaaagcgctatatttgaatgtatttttggttgNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcgaacagaaaa
gtccttcggaagatatgggacccgaaataccccttggtagcacttttctg
tgaaatatcgtatctccaacttattactaaaaacgggggttttgttatct
tttttgaacagtgcaattaaaagttggaaagtgtttgtgcattggtatta
ttgatatcattgattatttcgaaacgaagtgaaatcacagtataattgtt
tttattgaaaagataagcatgaacttatattgcctttgttatttttaagt
cattaaagaattttgctaattcccaaaacactaaatacagtttggctatg
aggtcaataaagagatcgtaaaatgtgttatgatcaaACAACTGTTTTAT
CAtgtcactacccccgttttagtaataagttggagatttgatatttcaca
gaaaagtgctaccaaggagtatttcgggtcccatatcttccaaaGGAATT
ttttgttcgccttgaaatttaactaACTTCTTGACcaaaggttgaactac
cactggtgtaaaaatgaacgttatagcataagtagaaaaaagNNctctga
aacaagcaaaaaaaaattccataattatatttgactatcaaaagttacag
gcattcttgtttccactgccaattatatctggacagactttaaaattgaa
ttttcaaactcaagaagtaaacaatgataaagtttaaaaaatgcaaAGTA
GAGAATTCACGGTATTTAAGGATTCAAAAACTTAAAGGGAAATCAATTAA
GATGAGGATCAACACCATCCACCATTaaaaaagagtatttcaaataaaag
tttattgattttcaTAATCAATGTAAAAGTTTTAGGCTAAGATGCATGGT
AGCACTTATTTAGGGTGTTTTAGAGGGTGATAATTTTCTTTGTCGTCCAA
CCATGGTGGGTAACAATTAATAGTGGTATAcatttaaactaaattttcaG
AAACACCAAAACGTTGGTAAGGAGACGAGCTTGAAAATTACCCAGGGAGG
GTTTAACAAGCAACATTCAAGGGGAGGTCGTTAAAATTCCCGCAAAAATC
CAAGAGgtttgaaattccaaaaataatgACCTCGTCGACATAGGgcgtaa
aatttttgaaaattgttcttcTCACTTCACTAGGATTTGAGAAAATGGAT
TCAGGATTGACAGTGAAATGGGATGATCGAATACATCCATCTCAACGACA
TTTTGATCGTATGGAAGAATGTGGTGTACCGAAAGGCTCTGTTACTCCAA
CCCTGTCTCATTTTACTTCGGAAGTTATGAAGGTAAAATACTCGTAATCA
TTACTCTCACTACACAGCCCTGTCTCAACGATTTAGAATGGAGTTTAAGA
GTTTTTCCCCTTTTTGACCAACTTTCGATTAAGACCCCTTCTTTGACACA
CGGAAGTTTACTCAAAAAGTAACCAGTGATATCTTTTCaccaatcaaatt
tttaattcttcATACTCAAACTCACTCATTACTCCTTTTCATATTTATTG
ATGCTCGTTAGATTTTATCTCTGTAACAAAATATTTAGGGTCGGCCAGCT
TAATTATACCTCAACTTCATCGGCGATCCAAAATatcagcaatctgattg
gttaaaaagagtacagtacaatatatcttgtattttccatgcataaatat
aaattgacgaaaagatgttgttgcattgtagcggtagcaacGATATTTTC
CGAGCCTATATTGTACAGAAAAATCTCGTAacaatatttctcatattgta
ctcgcaactgtccgataattATTAATACGTATTCATCGGAACCCCtcgaa
taaaataaaaaggacCTGATTGATCTATATATCTGTCTTTGctctttaat
tttatttattttaaaccTCTTCCTTCAGATATACGCTTACAGTGCTCGCG
AGCATGAGAAGCGGTATGGGACAACCAAAGAACACTCTGCTAAAATCGCA
TACAAGAACCACTTCCACAGTCAATACAACCCCAATGCTTCCTTACAAAA
AGTTTTACCCATGGAAGCAATAAACGCTCGTGAAATCGTTTATCCGCTCA
CGCTCGCCATGTGCGCTCTGACGGCCGACGGTGGTGCAGCGGCCGTGGTG
TGTAATAAGGATTTCATGATCAAGCATAAACTACAAGTATGTGTTTTCTT
TGAATCTCACCATAGGGCGTACTTCATTGTACATGCTAAATTTTCTCTGT
GGTTAATTGGTTAATAGTAAATTTCATTAGAGGGAAACTCATAGACCACC
CATATTTAAAAATCTCATGAAAGCCTTCCTTTATGTGCAATGAATTTATA
ATCCtattaaagtctattccaaATTAgatggcagtgttttttcaaacctc
aataacttttgatagaatttgaattagttagcggttttgtgcttgttaaa
aagataatccggagtggaataatcaaaataaaaaaaaatttaaacaatgg
aaaaacgaaaaattaagaagaaaatcaacttaaaaataatgctatgatct
tcatttttgtatcagaaactcttcaatcttagaacgtcaCAAATGTGAAA
Cagctttcttcttcttcattttcaatcttcattttccgatcttttttgag
ttttttctttatgacaatatcccactcctgtttgtcttttcaacgagcac
aaaattgcTACTTAAtccaaattctatcaaaagttatagaggtttgaaaa
aacaatgcaagctaatttgaaatagactttaatcAAGGAGAAAGTCAGTT
TAAGAACATAGTCAAGAGCACAGCGTTGcacaaatattttagaaaatttc
ctTGAGGGTTATATGGTAAGCAGTGGTAAgcattatttttaaataagttt
ATTCTAtgtagcctagttaactaagcccgtattcacaaggttaggacaca
cggcttatggtAATATAGCGGCTTCGgggctttaaagattttttatattt
gcgaATTTTAAGTTTGCTTTGAAATACTAGTTATTCAGTCCCAACTTACT
ATCAGATTTATCctggtgactgaatcaaactagcttagatttctagctAT
ATTCTATGACGGTTTTAAAGGGATTATGGCGATGGTTTCAGCTATTTTAC
CTGTAGATTCCTTACATGATCTTGAGCAAAATCTAgtatgaatttcaaaa
aaatctcaaaccacctgattatccctttaaattcACAGAACAAAGCGGTA
GAAATCATAGCTCAACAAATGACCACCGACCTTCCTTCATCTTTCAATAC
TGATGTCACCAATGTTGGTGGATTGGAAATGGCGCGTCAAGCTGCCAATT
ATTGCTATGAAAAATCAGGGTATACGGCGCGCGATGTTGATGTTATTGAG
TTACATGATTGCTTCGCCCCAACTGAGGTTTGTATGCAGTTTTTTCAACG
AGTGATAGATGTTAATACATTTGCTCCCGAACTAGAGGCATCAAAATACG
AGAGGAACCTCCAAtggcaataacttttgatacaaacATTTTACTTATTT
ATTGCGCATTTTTGAAATGTATATGAAACCTTGCGTTCATTTCCGTTCAA
ATTGAAGCCTTTTCAAGCCTCTAAAAGTCAACTTGCGTTGGAACTCCTTT
TTTTTTCCTCGTGAAACGGACTGTGTTTACCCTACTAATGAATTGGGGAA
GATTTGTAATAAATTCATATGTTTATAAAGCAAAAACTTCCCATCACAAA
TTCTCATTTCTTACGACAGCAAGAAGTAAAATAACGTCATGAATCTGTTT
ACGCGACCTCGATACTCGTATTTATGTAAAATTTCATGGGTCGCGATgct
acagtaaaacctctaattaacggacactctaaaaggcggacacctctgat
tagcggacacctctgattagcggacaatttcattttccccagccgtttcc
tagtcaaattctcataaaaaatttctaaaaggcggacactcaattagcgg
accctctggttagcggacaatttttttcgcacgaaatggccaaaaccccc
tattttagctctccaattagcggacgttgaatatcaaacgggtcacagac
gtccaaaattgaaaaaaaaaaatttaggTATTTTTATTTCAAGCACTTAC
tagtcttattattcaaattatttctacaaatttccagttttcccttgacc
cattcaacgaatttaggtgggccaaagaaatcataaatcactggtacTTC
AAGTTCGTACCTCGATTTAACCTCTTGCCAGTCACTCGAGCTCTTCTATG
GCCTAatgtctgcagataagtacttcagatcccaattttgtattttcgac
accctgggatggcctaatttcaaaattggagctccgagatcaaaagtttc
taaaaggcggacccctttccccgatggtgtccgctaattagaggttccac
tgtactATGTTTAAGCGTTAAACCTTATCGGTGCAGAGTCGTATAAATCA
TTATTCAATATCACATGATAATGGGTTATATTAAAAAGAACCTCCAATGA
AGGATTAAAAGTCTACTCTTTTTTCTCAGTTACTTCTGTATGAAGCACTT
GGTTTGTGTGAAACTGGCAAAGCTGGAGAATTGATCGATAACGCGAAATG
GATTGAGAATAAACAAGGTATAGCTATTTATTTTGTATGACAACATGAAC
CAAGCTTTGATACTTGAATATTGTCCTTCATAATTATCTTTTATTTTCAT
AAAATCTCCGATTAACCTTCCAACTAGTTTGAAAAATAATGAAGTTTAGC
CAGCTTCAAGGAGATTGAGATTGATTTTCCTGGTAATAAACTTGGCTAGG
TACCATATGATCAAATATGGTTGAAGATTCACGTAATCGTAATTGCTCCG
GTTAATAAGCTAAGTTTCTTTTTTGAAATGCTTTGCCTGGGGACAAGCGT
TTCATGAAAATTACATCCTTGGTCTTTAAATAGTTGGAGAAATGAAATGC
TGCACGATTGTCGGTTTGCAAGTTCAATTAAATTTTAAGATGGGGGAAAG
AAATCAGACGTTAAACAAAATGTTATGATATTTTTCAGGTGGTAAACTTT
GTCAACTCGGTAACAAATGGGTGGTGAACACAGATGGTGGATTAGAATCT
AAAGGTCATCCAATTGGTGCTACTGGTATCGCACAATGCGCCGAAATTGT
ATATCAGGTTAAGATGTTATGAAACCTAATTCCCTATATCCGTTATACAG
TACGGTCTCCATAACTGTAAATAATTATTTATGATTATGTCTTACTAAAT
TCAAGAAAGAGATGTAATTTTAGGTTTTTTTACATAAATACCTTATACAT
ACATATCTTTTGAATATCAATCTAAAGGTTATCAGGAGCCCATCTTAAGC
ATTTTTTCTAAATTTGTGTTGTCTCTTTATTAAGGATGATAATGTGTAAT
ACTGTGAGCAAATTTAAACCCTTCGAGTATCTTCCTATTTTTTTACTAGG
CGAAGCATCCTTGGGGGCGGGTCGAGGACTCCAAGATGCTAGATCAATTT
CAATTTCCTTGTATTTTAGCTTCGTGGTGAGGCTGGCAAGCGTCAAGTGG
AAGGAGCTCAGATTGGTTTGCAACATAATTTTGGAATCGGTGGTGCTGCA
GTAGTCACTATGTACAGAAGGATAGGCGTACGCCCGTCAAAACTTTAAGG
AAGTTGTTGATGGATTAAACTATGAGGGTAGGGGTTGCAATAAGAGCACT
GTTAAGATAACTTTACCGAAAAGCTCTTGTAAAGAAATGTTTAACGTAGG
GACACTTTTTCAGCAACAAATCATATTAAAGAGGTGTCGTTAAAACATTT
GATTTGTCCCTTTTTTCAGTGTCATTTTTGGGTTCGTTGGACCGCTTTAT
TCAAATCTATCTTTTACTCTGCCAGTTTAAGTTCTCGATAAAAAATTACC
GACAACCAAAAGAATCGCTCAAACATAAAACTAAATTCAGCTTTGcaatt
atgtacaaaatatTATGTTCTCTTGAAAATTAGGCTAGTAGGCCAAGGAA
TTAAGAATTCCTAATTTAAAGATACACTGAAGCCTAAACTTTTAGGTCGC
CTTTATTGTGTAATTTATAAAGAATTAATTTTGCTATTTTGTATAAATat
agaatttttaaaagataatAAAAATAAGACGAGGAATTTTAATGACGA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_010605	XLOC_010605	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000313	supercontig	sc0000313:174087..185184 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.1909	10.1921	16.9971	15.8629	1.89532e-06	0	0	0	2.52037	3.48536	2.97314	3.3758	3.29547	2.84054	4.97053	4.71569	5.87518	6.82527	3.24452	2.56012	3.20646	3.92243	4.45458	2.94426	2.01485	0.688026	2.89589	2.88073	2.60722	2.72749

Blast

[Close]

BLAST of TCONS_00018920 vs. Swiss-Prot (Human)
Match: NLTP (Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 1.404e-98
Identity = 175/352 (49.72%), Postives = 235/352 (66.76%), Query Frame = 3

Query:    3 QKALY-ELGLTGIPIFNTXXXXXXXXXXLMLSRLLVMSGEYSCVLALGFEKMDSG-LTVKWDDRIHPSQRHFDRM-EECGVPKGSVTPTLSHFTSEVMKIYAYSAREHEKRYGTTKEHSAKIAYKNHFHSQYNPNASLQKVLPM-EAINAREIVYPLTLAMCALTADGGAAAVVCNKDFMIKHKLQNKAVEIIAQQMTTDLPSSFN-TDVTNVGGLEMARQAANYCYEKSGYTARDVDVIELHDCFAPTELLLYEALGLCETGKAGELIDNAKWIENKQGGKLCQLGNKWVVNTDGGLESKGHPIGATGIAQCAEIVYQLRGEAGKRQVEGAQIGLQHNFGIGGAAVVTMYR 1043
            Q+A+Y  LG+TGIPI N NNNC++ S AL ++R L+  G   CVLALGFEKM  G L +K+ DR  P+ +H D +  + G+    V P          +++ Y+ +EH ++YGT  EH AKI +KNH HS  NP +  Q    + E + ++E+   LT+  C  T+DG AAA++ ++ F+ K+ LQ+KAVEI+AQ+M TDLPSSF    +  + G +M+++AA  CYEKSG T  D+DVIELHDCF+  ELL YEALGLC  G+   L+D     +N  GGK       WV+N  GGL SKGHP+GATG+AQCAE+ +QLRGEAGKRQV GA++ LQHN GIGGA VVT+Y+
Sbjct:   73 QRAIYHSLGMTGIPIINVNNNCATGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGIKFSDRTIPTDKHVDLLINKYGLSAHPVAP----------QMFGYAGKEHMEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQDEYSLDEVMASKEVFDFLTILQCCPTSDGAAAAILASEAFVQKYGLQSKAVEILAQEMMTDLPSSFEEKSIIKMVGFDMSKEAARKCYEKSGLTPNDIDVIELHDCFSTNELLTYEALGLCPEGQGATLVDRG---DNTYGGK-------WVINPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKRQVPGAKVALQHNLGIGGAVVVTLYK 404

The following BLAST results are available for this feature:

BLAST of TCONS_00018920 vs. Swiss-Prot (Human)

BLAST of TCONS_00018920 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NLTP	1.404e-98	49.72	Non-specific lipid-transfer protein OS=Homo sapien...	[more]

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TCONS_00018920 (transcript) - C. hemisphaerica