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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018865 ID=TCONS_00018865|Name=TCONS_00018865|organism=Clytia hemisphaerica|type=transcript|length=1124bp
CGAAAAACAATTTCCCATCAACCATTCGTAGATTCTGTTCCGTAAAATAT
ACACGATAGGATCACACAGTGACTTACTGAACAATAACATTAGCATACCA
AGCTCCACTAAACTACCTTTGTATATACTGACATCTCCTTTCTTTATAAA
CACAATGTATACGAGAGGGGGTAAAGTGCAGAACacgtatgatagaatga
tactTAAACATGTCAAGGTCACTTTACGTTGCTCAACTCTACTGGTTGCG
TTCTGTAAAATATTCATGTCTTGTGCGTTTCTACGGAGATGCATGACGCT
TCGTCTTGAAATTCGAAAGAAGTAGAGATAAACAACAAAAAGGAAGAAGT
CTGACGTCATAATGAGTATCCCGAGGATCAAGTAAAATGTCTTTCGATTG
TTGTATAGTTGAATCGTTGGCAAGATACTTACAAACCAGATGAAAATTAA
GCCGATACTTATACGACGTCGTTGAATAGTTCGGTGGTAGAATGGACGTT
TGATGCAACAAAAACGTTCCGCTGAAAGGACCAGCACGTGACTGAACGAT
ACAGTCACGGAGAAACCAGCCAAGTAAGAATCGAACTGTAAAAGCCATCC
TGGTACCTGGTTGTTACATAAGAAAACTACCAAAATCAAAAATGCAGACA
CTCCAATCAAGATGTTTGCACCGCTTAAACTCATCAGGATTTGTCTGTCC
GGTTTTCGTTGCTGGAAAGCTTTCTTTTGTCGGATAAGGAGCAGGAATAA
TGTGGTAATGTTTAAAGCAATGACCAAAAGGGATTCGATAAGACCGAAAA
TGAATAAGACTTTGACACCTGTCCGTTGTGTGTTAAAAATTGTATTATTT
TTCATCTTGCTCTTACCACCATCAGTTTCTGCTTCAAAAAACCCAATCGA
TCAAAAGGATATCGTATCTTTCAGCACACTGGGTTTCTCACAGGAGTCGA
ACGATCTCCAGTTTTAAAAGAATGTCCTCGGATTTTTTTCGCCTTTACTA
CACTTATTTTACACTATTGCTTAGTTTTCGTTCTCAATGCAGAAACATGT
TCATAATTCTACAAATCTCATTCCATCTTTCAACTGACGTAAGATGATCA
TTGTTGAAACTTTAATAATTCTTT Run BLAST on NCBI protein sequence of TCONS_00018865-protein >TCONS_00018865-protein ID=TCONS_00018865-protein|Name=TCONS_00018865-protein|organism=Clytia hemisphaerica|type=polypeptide|length=285bp
MKNNTIFNTQRTGVKVLFIFGLIESLLVIALNITTLFLLLIRQKKAFQQR
KPDRQILMSLSGANILIGVSAFLILVVFLCNNQVPGWLLQFDSYLAGFSV
TVSFSHVLVLSAERFCCIKRPFYHRTIQRRRISIGLIFIWFVSILPTIQL
YNNRKTFYLILGILIMTSDFFLFVVYLYFFRISRRSVMHLRRNAQDMNIL
QNATSRVEQRKVTLTCLSIILSYVFCTLPPLVYIVFIKKGDVSIYKGSLV
ELGMLMLLFSKSLCDPIVYILRNRIYEWLMGNCFS Run BLAST on NCBI transcript from alignment at sc0000309:64468..65591 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018865 ID=TCONS_00018865|Name=TCONS_00018865|organism=Clytia hemisphaerica|type=transcript|length=1124bp|location=Sequence derived from alignment at sc0000309:64468..65591 (Clytia hemisphaerica)
AAAGAATTATTAAAGTTTCAACAATGATCATCTTACGTCAGTTGAAAGAT
GGAATGAGATTTGTAGAATTATGAACATGTTTCTGCATTGAGAACGAAAA
CTAAGCAATAGTGTAAAATAAGTGTAGTAAAGGCGAAAAAAATCCGAGGA
CATTCTTTTAAAACTGGAGATCGTTCGACTCCTGTGAGAAACCCAGTGTG
CTGAAAGATACGATATCCTTTTGATCGATTGGGTTTTTTGAAGCAGAAAC
TGATGGTGGTAAGAGCAAGATGAAAAATAATACAATTTTTAACACACAAC
GGACAGGTGTCAAAGTCTTATTCATTTTCGGTCTTATCGAATCCCTTTTG
GTCATTGCTTTAAACATTACCACATTATTCCTGCTCCTTATCCGACAAAA
GAAAGCTTTCCAGCAACGAAAACCGGACAGACAAATCCTGATGAGTTTAA
GCGGTGCAAACATCTTGATTGGAGTGTCTGCATTTTTGATTTTGGTAGTT
TTCTTATGTAACAACCAGGTACCAGGATGGCTTTTACAGTTCGATTCTTA
CTTGGCTGGTTTCTCCGTGACTGTATCGTTCAGTCACGTGCTGGTCCTTT
CAGCGGAACGTTTTTGTTGCATCAAACGTCCATTCTACCACCGAACTATT
CAACGACGTCGTATAAGTATCGGCTTAATTTTCATCTGGTTTGTAAGTAT
CTTGCCAACGATTCAACTATACAACAATCGAAAGACATTTTACTTGATCC
TCGGGATACTCATTATGACGTCAGACTTCTTCCTTTTTGTTGTTTATCTC
TACTTCTTTCGAATTTCAAGACGAAGCGTCATGCATCTCCGTAGAAACGC
ACAAGACATGAATATTTTACAGAACGCAACCAGTAGAGTTGAGCAACGTA
AAGTGACCTTGACATGTTTAagtatcattctatcatacgtGTTCTGCACT
TTACCCCCTCTCGTATACATTGTGTTTATAAAGAAAGGAGATGTCAGTAT
ATACAAAGGTAGTTTAGTGGAGCTTGGTATGCTAATGTTATTGTTCAGTA
AGTCACTGTGTGATCCTATCGTGTATATTTTACGGAACAGAATCTACGAA
TGGTTGATGGGAAATTGTTTTTCG Coding sequence (CDS) from alignment at sc0000309:64468..65591 >TCONS_00018865 ID=TCONS_00018865|Name=TCONS_00018865|organism=Clytia hemisphaerica|type=CDS|length=855bp|location=Sequence derived from alignment at sc0000309:64468..65591 (Clytia hemisphaerica)
ATGAAAAATAATACAATTTTTAACACACAACGGACAGGTGTCAAAGTCTT
ATTCATTTTCGGTCTTATCGAATCCCTTTTGGTCATTGCTTTAAACATTA
CCACATTATTCCTGCTCCTTATCCGACAAAAGAAAGCTTTCCAGCAACGA
AAACCGGACAGACAAATCCTGATGAGTTTAAGCGGTGCAAACATCTTGAT
TGGAGTGTCTGCATTTTTGATTTTGGTAGTTTTCTTATGTAACAACCAGG
TACCAGGATGGCTTTTACAGTTCGATTCTTACTTGGCTGGTTTCTCCGTG
ACTGTATCGTTCAGTCACGTGCTGGTCCTTTCAGCGGAACGTTTTTGTTG
CATCAAACGTCCATTCTACCACCGAACTATTCAACGACGTCGTATAAGTA
TCGGCTTAATTTTCATCTGGTTTGTAAGTATCTTGCCAACGATTCAACTA
TACAACAATCGAAAGACATTTTACTTGATCCTCGGGATACTCATTATGAC
GTCAGACTTCTTCCTTTTTGTTGTTTATCTCTACTTCTTTCGAATTTCAA
GACGAAGCGTCATGCATCTCCGTAGAAACGCACAAGACATGAATATTTTA
CAGAACGCAACCAGTAGAGTTGAGCAACGTAAAGTGACCTTGACATGTTT
AagtatcattctatcatacgtGTTCTGCACTTTACCCCCTCTCGTATACA
TTGTGTTTATAAAGAAAGGAGATGTCAGTATATACAAAGGTAGTTTAGTG
GAGCTTGGTATGCTAATGTTATTGTTCAGTAAGTCACTGTGTGATCCTAT
CGTGTATATTTTACGGAACAGAATCTACGAATGGTTGATGGGAAATTGTT
TTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018865-exon-sc0000309-1491911889:64468..65591 | TCONS_00018865-exon-sc0000309-1491911889:64468..65591 | Clytia hemisphaerica | exon |
| TCONS_00018865-exon-sc0000309-1510915933:64468..65591 | TCONS_00018865-exon-sc0000309-1510915933:64468..65591 | Clytia hemisphaerica | exon |
| TCONS_00018865-exon-sc0000309-1575043694:64468..65591 | TCONS_00018865-exon-sc0000309-1575043694:64468..65591 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000309 | supercontig | sc0000309:64468..65591 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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