TCONS_00018770 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018770
Unique NameTCONS_00018770
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1037

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018770 ID=TCONS_00018770|Name=TCONS_00018770|organism=Clytia hemisphaerica|type=transcript|length=1037bp
ttaaagaaaaaaataataagataataataaaataatactGCAAAAATGGC
ATCGAACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTTATTGG
ATCAAAAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGT
AAGACAACTTGCAGTTGTAGTGTTGCAATCCAGCTTGCTAAGCACAAGAA
AAATGTTCTCATCATTTCTACTGATCCTGCACATAACATTTCCGATGCTT
TCGACCAAAAGTTTGGTAGAAAACCAACTGCTGTTAAAGGATTTACAAAC
CTATTCGCGATGgaaattgatCCAAATCTTGGGTTAACAAAACTTCCAGA
AGATGTTCTCGAGGACCAGGACTTCATGTCAATGGGAGGAAAGATGTTTC
AAGACTTGTTGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTTTTGCT
GAAGTCATGAAACTGGTTCGCAGCATGGATTTCTCTGTCGTCGTATTCGA
TACAGCTCCAACAGGGCACACGCTTCGCTTAATATCCTTTCCCAGCGTCA
TGGAGAAATCTTTGGAGAAATTACTGGCACTAAAATCACGTATACAACCT
ATGATTCAACAGTTCAGCACACTCCTTGGGATGCAAGATATGAACATGGA
ACAATTCACATCGAGACTGGATGAAACGCTACCAGTTATTAAAGAAGTAT
CGGCCCAATTCCAAAACCCTgaCCACACTACATTTGTCTGTGTTTGCATC
TCAGAATTCCTTTCACTCTACGAAACAGAACATCTTGTACAAGAACTCAC
CAAAATGAATATGGATATTCGAACTATAATTGTAAATCAACTGGtctttc
ctaagaaattgcaaggagGTTCGGCATGCGATTTATGTTCAGCAAGGTCA
AATATACAAAAGAAGTACTTAGAAGAAATAGCAGATTTATATGAAGACTT
CCACGTGATCAAGTTACCGCTTCTACCGAAAGAAGTTCGTGGACCACAGC
AAATTGAAACCTTCTCTGATTGGCTAATCAACCCTTA
Run BLAST on NCBI

transcript from alignment at sc0000306:100868..110502+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018770 ID=TCONS_00018770|Name=TCONS_00018770|organism=Clytia hemisphaerica|type=transcript|length=9635bp|location=Sequence derived from alignment at sc0000306:100868..110502+ (Clytia hemisphaerica)
ttaaagaaaaaaataataagataataataaaataatactGCAAAAATGGC ATCGAACGAGGATTTTGAAGAAATGGCACCCTCCATCCAACATTTATTGG ATCAAAAAGAATTACGCTGGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGT AAGACAACTTGCAGGTATGGCGAGAAATATTTAGAAAGATGTTGAATGAG ATTGTTATTGCATTGTCTATTATTCTTTACATGGGACTAAGATGTTTTGT ATtagtctttaaaaattcttccGGCCTTACCCAGTTTGTAAGTTCAattt tgattgatatttttgtCATGAAATAGTTTTGAGGGTTTTGTTTGTTAAAG AccttttgaaataatttcttaCCTTCAAGACTGTTCATTGAAATATAAGA TAAAAACACTCTgtatttttcctcaaaaattgacttcattTGACGTANNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNtatctactttctaaatatcaaaactccaagcactttgggacatttgtt cggcctcaagacgtcgggaaacgtctgaactttttcgtgggtcacccggt atattaTGTAGAAATTAATTATAGGAATTAGGGTATATTATGAACAATTT TTGTAGGGCTTTTCGTGTATTAACCTAATTTAATTAgggattttttcttt cagtatGTTCCTGGATCGCATTAGCATTTTTCATTCATAGAAtggttttt tttatgtttttaattttttttatgtttccacttcattattttcgaattaA TTTATATCAAGTTTATTTTTTAGCAGGGATGAAAATAAATACAAGTAATT GAATTTGTGTATTATATTTATACCTTGTCTAGTGGCTGGGTTGAAATTAC AATATACTACTTTATGAAAAGGTCtcacatttcaaaatattttcttaaaa ttctttgtgtttttaagAAGATATTTGAAATTGAATTCGCTCTACTTTCC ATTGattactttttgactttttggttCATATTATTTTGAGGGGTGAATCA GTTTTCTCTTTGGCTGGATATTTGCTAGAGATCAAGAGTATTTCATTTTC ACAACTTTTCTCTCTCCTGCAGTCACCTAAGTTAGCAGTCCCCTTTTTTG gtataagaaacaaaaattttctctatttatttttacagaaaaaaataata agataataataaaataatactGCAAAAATGGCATCGAACGAGGATTTTGA AGAAATGGCACCCTCCATCCAACATTTATTGGATCAAAAAGAATTACGCT GGGTGTTTGTTGGTGGTAAAGGGGGCGTTGGTAAGACAACTTGCAGGTAT GGCGAGAAATATTTAGAAAGACGTTGCCTGAGATTGTTATCTTTGTCTAT TATTCTTTACATAGGACTAAGATGTTTTGTNGGCGAGAAATATTTAGAAA GATGTTGAATGAGATTGTTATTGCATTGTCTATTATTCTTTACATGGGAC TAAGATGTTTTGTATtagtctttaaaaattcttccGGCCTTTGGTTTCTA AACCGAAGTTTGTAAGTTCAattttgattgatatttttgtcatgaaatag tttttgtttcttaaagaccttttgaaataatttcttaCCACAAGACTGTT CATTGAAATATAAGATAAAAACACTCTgtatttttcctcaaaaattgact tcattTGACATACCCCCTCCAttacatttttaaacaaaataagaaaaaca aatttttctcccttccaCACCGGACGAGCAcaaattttgagcaattctat CATTTATAttatgctttgtcagcataataGACACGCCTCTattctatatc ataaaaaaatatatctttaaAGTGTTCCTTTTCTTTACAATTGCAGTTGT AGTGTTGCAATCCAGCTTGCTAAGCACAAGAAAAATGTTCTCATCATTTC TACTGATCCTGCACATAACATTTCCGATGCTTTCGACCAAAAGTTTGGTA GAAAACCAACTGCTGTTAAAGGATTTACAAACCTATTCGCGATGGTTAGT TTTATTGAGATATTCTATGTGAATTTTTGATCTCATAATGTATTGGATAA TAAGATCAgtgccattgagtttcaagcccgaagggctagaggcgagacta tTGGATGGGAAATGCCCATCCTACGCCCGCgtgtagtttttacacaaacg ccggattgaaactaaaatctatcgcttgatttcaaaaaatgtagtcttcc aaaacaaaggaatcggTAGATACAATCCGTCATCATGATTACGGTGTGTT CTATGTgcattttggatgggaaataagtggcttcaatttctcttgcctga gtaGGGTTAAAGTTTAcgtctctagcccttcggacttgaAACTCAACGAT CAGTGCTCACAAAATCCAGGCTAATTTGTTGTGTTGGAGTCTATTTTCTG TTTGGGATGAAAAGCTTTAGCTTTGCCTACTGATAAGATATAAACAGTGT TGTAATAAATTGGTTATCTAAATTGGTATTATAGTCATTTTCTCactttt tcttaggaaattgatCCAAATCTTGGGTTAACAAAACTTCCAGAAGATGT TCTCGAGGACCAGGGTAGAGAATCGATCTATTTTTATTGGGTTATCGTGA TTTCTAATTAAGTTTCTATGAATAAGGGTCATTCTGCTGGACTAATTATC GAggttgttcttttttttgttaatttttggacctaccccggtggggtgaa ggtcctataaattcacctctgtccgttcgtccgtctgtccgttcgttacc agcttttctcgagattgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgattg aatcataggaatcatttgatttttggtacaaaggtgcaaaacagtggtgg ccaaaatgtgacggagcccgattttcgaaaaaaaatgtttttgggcaaat ttgggccaaaaaacggctaaaaagcgggttttttggactttgtgaaacat tggatcattgattttttctgattttttgcagggaagtagggtaccatcat aggtataagatggctcagggagatttttgcaaaaagatttgttggctcaa aaaaacgcatgtttatctataagaatcactattaataagcatacatcaat gttcttagtcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAG ctgtcaaaacaaatgtcagcCACATTTATCACCTGAagtgtaaaaaaatt gaaaaattgtcaattttcaaatgtcacactatttttgaccatgatcatat gtgttaaatgcataaccaggtaggtccataaaagtatcacttgtttttta ttgtttgataGAAGAAGAGGTTAGTTCAGGTTTGCCCTTCCTGTTCTATT TATGAATTAAATTGGGCAGTCTAAAGTCATTGTATCGTCCTCTTTTGact tatttcaattttatttcaagcaaaaacttttccaATTGGATGCCCAATTT TTGCCTACTGACAATTAGAATAGGTAGGAAAGTTGTCCGTCTATAAGCTA AAAGTTAGATTCACtttgaaatagattttcgaTCTCATAATCTTTTTGTG CTGTTTTACAGACTTCATGTCAATGGGAGGAAAGATGTTTCAAGACTTGT TGGGGGCTTTCCCTGGAATCGACGAAGCAATGAGTTTTGCTGAAGTCATG AAGTGAGTATCCCATTTATTATACCCTTTGTACAGTGTATtaactccata actcgaacacgtacAGAGAACACAcatttgttcgatttaaggaaATAAat agtaaggtttataaggcattgtttaCTTGTTCGATTTATAGAGGTTCAAA TAATTTAGCGACATTAACCATCNGTCATGAAGTGAGTATTGCTTCCCATT TATTATACCCTTTGTACAGTGtattctccataactcgaacacgtgCAGAG AACACAcatttgttcgatttaaggaaATAAatagtaaggtttataaggca ttgttgacttgttcgagttatagaggttcaaatAATTTAGAGACAATAAT CATAAAGAATGGTTCACTGTAAAAGTATTATCATTTCAAccaattatttt tacataacTCTCTACCAGACTGGTTCGCAGCATGGATTTCTCTGTCGTCG TATTCGATACAGCTCCAACAGGGCACACGCTTCGCTTAATATCCTTTCCC AGCGTCATGGAGAAATCTTTGGAGAAATTACTGGCACTAAAATCACGTAT ACAACCTATGATTCAACAGGTTAGTGTAACATGGTGTTAAGAACTTTGTT CATAGTGTGCAAAGTAGAGTACTTTTACGCAtacaaactttcgcgggcaA AAACTTTCGCGGTTTCCacaaattttggcccttttcgccaATTCTTGGAA GGGCCATTGGCGAAAGTTTTTGCTTGCGAAAATgttttgacaaaatagaa aatatttgtaaaactttaaactttgaaTCAAAtgtattttgttacttttt ggcCTAttataagactaataagtcaaaagaCAAAAGTTTCCAGCTTAGGA TGCCTTTGTTTAGGATGAAAATTTTACTTATTGAtacgcgaaagtttatg cttgagaagaatatttttttgtcaaattcggGATAGTAAAAAAATGTCGT AAACTTCGCGATTTTCAACCTCGCTAAAGTTTCTGAtcgtgaaagtttgt acaccAAAGTAGGGGTCAAGGTCCCtcaaaaaaacatttccagCACATGT TAAAAACCCGAATCAATCAAGCATGTTCTCAAGGCCCTCAATGCTGTTAT TTTATCTCGAGAAGTgtgtattttcttattttccctaTCTTTATCGTGAT ACAGACTTTTTGATATCTGCTATAGTAAAGTCCATCCGAATTAATTTAAT TCTCTTTCTTGCTATCATGTGGAGACCACTCTCAACGTAATAATTTCTCT GACATGGTTTCCACAAAGAAGTAATGAACAGTACGCACATAtaaagcgaa tggactttagAGTAGTAAAATAGATCTTGATCAAGCTGGCTGACGGACAA ACCTACCTTAACTGGATTAAATTTtgtgtggattaattttggcgattttC GCCGCGaaatttgaccattttcttgaaaattttagtcctcggaaaaaaat taaaacctaaATTTTGTCAAAGCCTCCAGGAAAATGAACGAAATTGGTTG AAAAAGAGGCCGATTCGCGAAATTCTGTCCATGCGAAAATTAATTCACTT AAGGTACTTTTTAATCCATCATTTTGTTctcattctttttctttctacAG TTCAGCACACTCCTTGGGATGCAAGATATGAACATGGAACAATTCACATC GAGACTGGATGAAACGCTACCAGTTATTAAAGAAGTATCGGCCCAATTCC AAAACCCTGTAAGACTCGAAAAATCATAGACacctagctggcacacaacg ttgtttcatctttatctaacgttcacaacgtccttacaacgttaaatgaa cgttgaaacaacgttgtgtgccagctgggcatgTATTTTAATcggattta ttttcaaaagactTCATTTTGCTTATTTGctaatttttgcctttttgcaA TTATAAGTTTTTGCTATTTGTGGCAAAATTTTGTCGCTTTCAGGATTATT GTTAACAGATTTTTGGCTGATTCTCAAAATTAAATCAATAGTAATTTTGC TTGAAGCTTGTATCACACCTGTTCACTTATTTGGTTTTATTCGATCGTCT TATCTGTAGTATGGGAGTTTTGAGCCCATTGGAAAGATTGATACAACAGT TCATTACAAGCACAAAGAAATCACCCTACACAAATTCGAAAAAGAGATGG ttggtttttgaaaagttttggtGTTTTAGATTAGTTCTTATTTGATAGGA TTCTTCACTATGCAATAtcctttttcaatattttcaggaCCACACTACAT TTGTCTGTGTTTGCATCTCAGAATTCCTTTCACTCTACGAAACAGAACAT CTTGTACAAGAACTCACCAAAATGAATATGGATATTCGAACTATAATTGT AAATCAACTGGtctttcctaagaaattgcaaggaggtatttttgaatttg ttttgattataaaGTACTGGCTAAAATAGTAGCGatgtatttgtattttt gacgacggtgGAGTGACAGAagcgattttggaaaaacccgcagttttgac ccacaaaattgaggacggtaaaagtgctgttTTACCGTCGTACTCAGTTG GCCAGGatctagaaaatttagaaacttACTGTCTCCACCACAGGAAACAC ATATACATAAACTCACTATAGTGTTAAGTTAATACTCAGAACGATATTCA TTGGAAATGctgaaaacaagaaaattaaaCATTCGGCTACGTTTCAACAG GTTTTCAGCCGGATCATGCTATAGACTTAagaaaatggtacttgatgcct ctctgctaaATAGGGGAATCCAGGGAATGGAATTGCGCCCTGGGTAAGCA GCTAAGAAAAAGGACGTCTTCGAGTCGCCCCAGGCTAGACTGCGGTCGCA AATTTTCTTACTACATCAAGCTCTAGCGACTCTACCCAGTGCCAGGGTCA TACAGTCAGAAACATGGCGTTCTAATTCTACAGGCCTATCAAGCGGGCAG ACACTTCGGTTTTGTGGGGGCTTAATTTTTCGAAGTCGTTACATTGATGC TTGTACAAAATGTACTATTGAGCGAGAATTGCTAGGTCTGGAACGCCATG GTCATAGAGGATTGATGCNGCTTGTACAAGATGTACTATTGAGCGAGAAT TGCTAGACCTGGAACGCCATGGTCATAGAGGATTGATGTTCGTATTCAaa ctttatcatttttaatcttttagGTTCGGCATGCGATTTATGTTCAGCAA GGTCAAATATACAAAAGAAGTACTTAGAAGAAGTAAGACTTATCTTTAAC AACTCTGGCGATTTTTCACTGACTCAAACCCTTTTTATTTTTGGCCTGTG ATTGggctttttctgaaatttcccGTACCCCCTCCCCTTTTGAGCATATC CATTTTTCGAGTTCCACAGCCCCCATGTCTGGCTTTAGAGACCCCTGGTG TCCAAGTCGACAGAAGGGTGGAGGATATCTTTGTGGTTTGTCTGTACTCC CTGAATATACAGGCATTTCGTCctgtaccccctggatatcctctctctCT CTTATAAGGTCCCATCCCTTAGATATCCAGATAGCATTGAACCAGTTGAT GTCCGttaccaaaaatggcccacttagaactctctcattcgttgcccgac ttcaattaagcaagccaggctTCCGACATTTTCAATAGGGTAAGACACGG ACTATTTCTTGAAAAGCCTATTTCCTGGATTCACTTATACTATGGATTTT CTTTCCAATAGTTTCCTGCGAGGAGCCGTTTTTACCTTAGCTTTCAccaa gaaaattacaaaaaaaacagccaCTCTCTTTCCAACGCGTTTAGCCTTCA AGAATTTTTGGAATACTTCTAGCCCTTCTCTCACCAAatttattggcttg tttttNTTTTTGGCCTGTGATTGGGCTTTTCCCGTACCGCCCCCCTCACC AAATTTATTGGCTTGTTTTCATTAGATAGCAGATTTATATGAAGACTTCC ACGTGATCAAGTTACCGCTTCTACCGAAAGAAGTTCGTGGACCACAGCAA ATTGAAACCTTCTCTGATTGGCTAATCAACCCTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010511XLOC_010511Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018770-exon-sc0000306-1491911889:100868..101031TCONS_00018770-exon-sc0000306-1491911889:100868..101031Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:100868..101031TCONS_00018770-exon-sc0000306-1510915933:100868..101031Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:100868..101031TCONS_00018770-exon-sc0000306-1575043694:100868..101031Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1491911889:103614..103761TCONS_00018770-exon-sc0000306-1491911889:103614..103761Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:103614..103761TCONS_00018770-exon-sc0000306-1510915933:103614..103761Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:103614..103761TCONS_00018770-exon-sc0000306-1575043694:103614..103761Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1491911889:104274..104331TCONS_00018770-exon-sc0000306-1491911889:104274..104331Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:104274..104331TCONS_00018770-exon-sc0000306-1510915933:104274..104331Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:104274..104331TCONS_00018770-exon-sc0000306-1575043694:104274..104331Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1491911889:106379..106469TCONS_00018770-exon-sc0000306-1491911889:106379..106469Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:106379..106469TCONS_00018770-exon-sc0000306-1510915933:106379..106469Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:106379..106469TCONS_00018770-exon-sc0000306-1575043694:106379..106469Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1491911889:106886..107036TCONS_00018770-exon-sc0000306-1491911889:106886..107036Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:106886..107036TCONS_00018770-exon-sc0000306-1510915933:106886..107036Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:106886..107036TCONS_00018770-exon-sc0000306-1575043694:106886..107036Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1491911889:108068..108175TCONS_00018770-exon-sc0000306-1491911889:108068..108175Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:108068..108175TCONS_00018770-exon-sc0000306-1510915933:108068..108175Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:108068..108175TCONS_00018770-exon-sc0000306-1575043694:108068..108175Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1491911889:108705..108852TCONS_00018770-exon-sc0000306-1491911889:108705..108852Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:108705..108852TCONS_00018770-exon-sc0000306-1510915933:108705..108852Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:108705..108852TCONS_00018770-exon-sc0000306-1575043694:108705..108852Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1491911889:109641..109699TCONS_00018770-exon-sc0000306-1491911889:109641..109699Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:109641..109699TCONS_00018770-exon-sc0000306-1510915933:109641..109699Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:109641..109699TCONS_00018770-exon-sc0000306-1575043694:109641..109699Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1491911889:110393..110502TCONS_00018770-exon-sc0000306-1491911889:110393..110502Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1510915933:110393..110502TCONS_00018770-exon-sc0000306-1510915933:110393..110502Clytia hemisphaericaexon
TCONS_00018770-exon-sc0000306-1575043694:110393..110502TCONS_00018770-exon-sc0000306-1575043694:110393..110502Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000306supercontigsc0000306:100868..110502 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
54.1142 50.0367 32.5862 25.832 9.4703 7.55574 0.0135896 8.57449 25.8663 23.557 20.3813 16.3314 19.7358 16.3541 13.8296 14.6207 20.8131 20.9495 7.97154 13.1185 14.3485 13.078 37.6028 33.0694 0.00487009 0.0078248 14.6429 12.1616 24.3244 22.6793
Blast
BLAST of TCONS_00018770 vs. Swiss-Prot (Human)
Match: ASNA (ATPase ASNA1 OS=Homo sapiens GN=ASNA1 PE=1 SV=2)

HSP 1 Score: 393.66 bits (1010), Expect = 1.955e-135
Identity = 196/325 (60.31%), Postives = 262/325 (80.62%), Query Frame = 1
Query:   61 DFEEMAPSIQHLLDQKELRWVFXXXXXXXXXXXCSCSVAIQLAKHKKNVLIISTDPAHNISDAFDQKFGRKPTAVKGFTNLFAMEIDPNLGLTKLPEDVLEDQDFMSMGGKMFQDLLGAFPGIDEAMSFAEVMKLVRSMDFSVVVFDTAPTGHTLRLISFPSVMXXXXXXXXXXXXRIQPMIQQFSTLLGMQDMNMEQFTSRLDETLPVIKEVSAQFQNPDHTTFVCVCISEFLSLYETEHLVQELTKMNMDIRTIIVNQLVFPKKLQGGSACDLCSARSNIQKKYLEEIADLYEDFHVIKLPLLPKEVRGPQQIETFSDWLINP 1035
            D E + P++ ++++Q+ L+W+FVGGKGGVGKTTCSCS+A+QL+K +++VLIISTDPAHNISDAFDQKF + PT VKG+ NLFAMEIDP+LG+ +LP++  E+ + +SMG KM Q+ + AFPGIDEAMS+AEVM+LV+ M+FSVVVFDTAPTGHTLRL++FP+++E+ L +L+ +K++I P I Q   +LG+ DMN +Q  S+L+ETLPVI+ VS QF++P+ TTF+CVCI+EFLSLYETE L+QEL K  +D   IIVNQLVFP   +    C +C AR  IQ KYL+++ DLYEDFH++KLPLLP EVRG  ++ TFS  L+ P
Sbjct:   20 DVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDPAHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFEEDNMLSMGKKMMQEAMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLSLYETERLIQELAKCKIDTHNIIVNQLVFPDPEK---PCKMCEARHKIQAKYLDQMEDLYEDFHIVKLPLLPHEVRGADKVNTFSALLLEP 341          
The following BLAST results are available for this feature:
BLAST of TCONS_00018770 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASNA1.955e-13560.31ATPase ASNA1 OS=Homo sapiens GN=ASNA1 PE=1 SV=2[more]
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