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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018769 ID=TCONS_00018769|Name=TCONS_00018769|organism=Clytia hemisphaerica|type=transcript|length=1259bp
CAGTAGTTGCTATTTCCCATCCGAGTCGAGTACATTAGAGGAGGCTGAAG
ACTGCATGTTAGAGATGATTTGTGATAGAGCACGTGTTACCGATGGATTG
AAAATAATGGATTTGGGATGTGGTTGGGGTGTGACTGGATTATACATTGT
GGAGAAATTCCGGAATTGTGATGTCACATGTATTTCCAATTCGTCAACTC
AAGCTGCATTGATCAACAAAAGGGCTGCTGAGAGAGGGTATTCTAACAGA
TTGAGATGTATCACAGCTGATGCTAACGTCTTCACCACAGAGGAAAGGTT
TGACCGTATCATCTCTGTTGAAATGTTTGAGCACATGAAGAATTATGATA
ACCTGATGTCTCGTGTATCTTCATGGTTGAAACCTGCTGGTTACCTATTC
ACACATATTTTGTGTCACCGTGAATATTGTTATCACTTCAAAGAGAGCAA
GGATGAGGCTACTGGCTGGATGGCTAAACATTTTTTCAGCGGTGGCACCA
TGCCTTCCAGCGATCTATTTCTGTATTTCCAGAAAGATTTGAGTGTAGTT
GACCACTGGAATGTCAATGGCATCCATTACTCAAGAACCCTGGAGGCTTG
GCTAGACCGGTTAGACGCCAACCGTGACCGTGTTTATGAGATCTTGCACC
GCCAACATGGAGATGAAACAGATAAGCAGATTTTTAACTGGCGCATGTTT
TTCATTTATTGTTCAGAAGTTTTCAAATATGATGGTGGCAATGAATGGTT
GGTGTCTCACCATTTGTTTCAAAAGAACCAACATTGCAAATTGTAGGCTC
TGGTGATGTCGACAGAACTGATGTCTAAGTTAGATTAGATTATTGGTTGG
AAGGCTTAAGAAAtggttttaattttattcaCTGTGTAGGAAGATTTTCA
GAATAAATTGAGAAACACGGCTGACTTAACCCGTGATATATTCAaccaat
agatcttatcggagtttttgatttttctaaaaaagcgatgcattgttgGA
TTGTTTCAGGAGTattaaaatagaaatctcttaggaattcctcaagggaa
ttctattgtagtactcccgaaacaatcccacaatgcatcgtttttttaga
aaaatcgaaaattccgataagatctattcatCAAATATATTGTAGATAAT
ATGTAGACCAGCTTACTTTGATTGATATAATCAAAAAGTTATAATATGAT
TTATACGTATTTTTGACTCTTTCTTTGATTTGAGTGCAAACTTTATTAAT
CATAACATT Run BLAST on NCBI transcript from alignment at sc0000306:97959..100271+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018769 ID=TCONS_00018769|Name=TCONS_00018769|organism=Clytia hemisphaerica|type=transcript|length=2313bp|location=Sequence derived from alignment at sc0000306:97959..100271+ (Clytia hemisphaerica)
CAGTAGTTGCTATTTCCCATCCGAGTCGAGTACATTAGAGGAGGCTGAAG
ACTGCATGTTAGAGATGATTTGTGATAGAGCACGTGTTACCGATGGATTG
AAAATAATGGATTTGGGATGTGGTTGGGGTGTGACTGGATTATACATTGT
GGAGAAATTCCGGAATTGTGATGTCACATGTATTTCCAATTCGTCAACTC
AAGCTGCATTGATCAACAAAAGGGCTGCTGAGAGAGGGTATGAATGTGGT
TTTGTATTATTTAgagaagatttttttaaagacttccagttgatacattt
ttatttgTTCTATATTTTGTCTAANaattcgatatttttttataagcaca
ttatcaattacttaggtattggcttttctcgagattggctctttcattct
ttatgatttttacacatagatgcataactataaacccttgaatgtgacag
gacccgattttctaaaaaaaatgtttttgggcaaatttgggtNTAAGTTT
TCTCCTTCACACGGTTTCCTGTTAAAAggattaatttttttggtcatttt
tcatgaTAATTTATAAGTGGTTAACTGGAAAGGGATAGTCACTTGGAATA
ACAACTGATGATTTCTTTTCCAAACTTTTGAGAATGTAAAACCTTGGGTT
GGAAAATCAGTATTTTAATGGTTGAAGAGTGCCAAACATTAATCAAGGAT
CTTGTCTATGAAAATATCCTTGCTTCATTCAGATTTCTAcacattttttc
atgttttaaacTTCTGTAAAACTTTATCTTTAAAGGTGGATACAGATTTT
TATCTCACTATCCTTGGAGACAGGTTGAAATACAGTAGTTGCTATTTCCC
ATCCGAGTCGAGTACATTAGAGGAGGCTGAAGACTGCATGTTAGAGATGA
TTTGTGATAGAGCACGTGTTACCGATGGATTGAAAATAATGGATTTGGGA
TGTGGTTGGGGTGTGACTGGATTATACATTGTGGAGAAATTCCGGAATTG
TGATGTCACATGTATTTCCAATTCGTCAACTCAAGCTGCACTGATCAACA
AAAGGGCTGCTGAGAGAGGGTATGAATGTGGTTTTGTATTATTTAGAGAA
GATCTTTTAAAAGACTTCCAgttgatacatttttatttgTTCTATATTTT
GTCTCAATGAttagtattttttcattaaattttgtcaTCCTTCATTAAAA
TCTAGCTCAAAATGACATCAGTCCCATCTGAAAAGCCAGAGAGGATAGGA
GAATTATAACAatacttttaaaaagtatttcttttaaacagGTATTCTAA
CAGATTGAGATGTATCACAGCTGATGCTAACGTCTTCACCACAGAGGAAA
GGTTTGACCGTATCATCTCTGTTGAAATGTTTGAGCACATGAAGAATTAT
GATAACCTGATGTCTCGTGTATCTTCATGGTTGAAACCTGCTGGTTACCT
ATTCACACATATTTTGTGTCACCGTGAATATTGTTATCACTTCAAAGAGA
GCAAGGATGAGGCTACTGGCTGGATGGCTAAACATTTTTTCAGCGGTGGC
ACCATGCCTTCCAGCGATCTATTTCTGTATTTCCAGAAAGATTTGAGTGT
AGTTGACCACTGGAATGTCAATGGCATCCATTACTCAAGAACCCTGGAGG
CTTGGCTAGACCGGTTAGACGCCAACCGTGACCGTGTTTATGAGATCTTG
CACCGCCAACATGGAGATGAAACAGATAAGCAGATTTTTAACTGGCGCAT
GTTTTTCATTTATTGTTCAGAAGTTTTCAAATATGATGGTGGCAATGAAT
GGTTGGTGTCTCACCATTTGTTTCAAAAGAACCAACATTGCAAATTGTAG
GCTCTGGTGATGTCGACAGAACTGATGTCTAAGTTAGATTAGATTATTGG
TTGGAAGGCTTAAGAAAtggttttaattttattcaCTGTGTAGGAAGATT
TTCAGAATAAATTGAGAAACACGGCTGACTTAACCCGTGATATATTCAac
caatagatcttatcggagtttttgatttttctaaaaaagcgatgcattgt
tgGATTGTTTCAGGAGTattaaaatagaaatctcttaggaattcctcaag
ggaattctattgtagtactcccgaaacaatcccacaatgcatcgtttttt
tagaaaaatcgaaaattccgataagatctattcatCAAATATATTGTAGA
TAATATGTAGACCAGCTTACTTTGATTGATATAATCAAAAAGTTATAATA
TGATTTATACGTATTTTTGACTCTTTCTTTGATTTGAGTGCAAACTTTAT
TAATCATAACATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018769-exon-sc0000306-1491911889:97959..98195 | TCONS_00018769-exon-sc0000306-1491911889:97959..98195 | Clytia hemisphaerica | exon |
| TCONS_00018769-exon-sc0000306-1510915933:97959..98195 | TCONS_00018769-exon-sc0000306-1510915933:97959..98195 | Clytia hemisphaerica | exon |
| TCONS_00018769-exon-sc0000306-1575043694:97959..98195 | TCONS_00018769-exon-sc0000306-1575043694:97959..98195 | Clytia hemisphaerica | exon |
| TCONS_00018769-exon-sc0000306-1491911889:99250..100271 | TCONS_00018769-exon-sc0000306-1491911889:99250..100271 | Clytia hemisphaerica | exon |
| TCONS_00018769-exon-sc0000306-1510915933:99250..100271 | TCONS_00018769-exon-sc0000306-1510915933:99250..100271 | Clytia hemisphaerica | exon |
| TCONS_00018769-exon-sc0000306-1575043694:99250..100271 | TCONS_00018769-exon-sc0000306-1575043694:99250..100271 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000306 | supercontig | sc0000306:97959..100271 + |
Blast
The following BLAST results are available for this feature:
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