TCONS_00018758 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018758
Unique NameTCONS_00018758
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length320

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018758 ID=TCONS_00018758|Name=TCONS_00018758|organism=Clytia hemisphaerica|type=transcript|length=320bp
TCCTAATCCATCTTCCAGAAAACATTGACCCAAAAACGATAGGGACGCAT
TCCTTGAGGGCAGGCGGTGCCTCTTCTGCCGCAAACGCTGGAGTATCCGA
TAGAATGATTTCCAAACATGGTCGATGGTCCCTCGGCAATAGTCGAGACA
GATACATCAAGGACAGTCACACAAGGCGATTCTCTGTCTCTAGAAAGATG
GGACTATAAACACCAAGGATTTTGTTTTACTGTATTTCGTTTCGATTTCG
TGTTTGTCTTTGGTTCCTGCTTTACTTTTTTGTTACCTCAGCAGACAAAA
AGAGACGTTTCATAAGCTCC
Run BLAST on NCBI

transcript from alignment at sc0000305:243254..243573

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018758 ID=TCONS_00018758|Name=TCONS_00018758|organism=Clytia hemisphaerica|type=transcript|length=320bp|location=Sequence derived from alignment at sc0000305:243254..243573 (Clytia hemisphaerica)
GGAGCTTATGAAACGTCTCTTTTTGTCTGCTGAGGTAACAAAAAAGTAAA
GCAGGAACCAAAGACAAACACGAAATCGAAACGAAATACAGTAAAACAAA
ATCCTTGGTGTTTATAGTCCCATCTTTCTAGAGACAGAGAATCGCCTTGT
GTGACTGTCCTTGATGTATCTGTCTCGACTATTGCCGAGGGACCATCGAC
CATGTTTGGAAATCATTCTATCGGATACTCCAGCGTTTGCGGCAGAAGAG
GCACCGCCTGCCCTCAAGGAATGCGTCCCTATCGTTTTTGGGTCAATGTT
TTCTGGAAGATGGATTAGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010502XLOC_010502Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018758-exon-sc0000305-1491911889:243254..243573TCONS_00018758-exon-sc0000305-1491911889:243254..243573Clytia hemisphaericaexon
TCONS_00018758-exon-sc0000305-1510915933:243254..243573TCONS_00018758-exon-sc0000305-1510915933:243254..243573Clytia hemisphaericaexon
TCONS_00018758-exon-sc0000305-1575043694:243254..243573TCONS_00018758-exon-sc0000305-1575043694:243254..243573Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000305supercontigsc0000305:243254..243573 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.623282	0.361845	0	0	0	0	0	1.14827	1.71468	8.76342	0.37961	1.04598	1.8807	1.17959	3.0398	3.06206	9.10457	0	2.61966	10.532	17.5794	0.885074	12.1602	0	0	0.876416	6.99877	2.48296	1.94641
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018758 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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