TCONS_00018675 (transcript) - C. hemisphaerica

Overview
NameTCONS_00018675
Unique NameTCONS_00018675
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1795

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00018675 ID=TCONS_00018675|Name=TCONS_00018675|organism=Clytia hemisphaerica|type=transcript|length=1795bp
aatagatatataaatcgaaatttaaaattatacattacttccattaaatt
ctaattattcgttttataaataggtaggtccattaaagtattacttgttt
tttactgtttttattaCGCTTTTTTCTCAATATAAAATTTAACTCTTTTG
ACAGGCGCCATGGAGATTGCTGAAAAGTCAAATTGAATTGATGCAGAAGT
TGATTAAAGACTTGGGTATGAATAAGCCAGGTGGATTTTCAACGGAAAAT
GTGATGAAGGTGTTACTCCTGGGTTTAGAACATCCTCACAACGATGTCCG
AGATGCTGCTTTGTCCTGTATCGTTGATGTCTATAAAATTgtgaAAGAGC
CGTTGAAATCATTTTTCCCTCCTGATGACGCAAACACACGAAAGAATCCT
CTTTATACCAAACTCTTCGATAGTCTTGATCGAGCAGATGGTAAAATGAC
TGAATCAGAGAAAAAGGCTGcaacgaaaaagaagaaagaagatgcAGAGA
AAAGCAAAATGGAAGAGGTGAAAGCTTTACAAGCACAACTACAAGAAATG
CGATCTTTGGCAAAAGCTCAAGTacaagaaaatgaaaacgaGGCCAACCC
TTCGACACGAGAAGAAAACAACAACACGAAAAATAATAATGGTACAAAAG
CCACCAAAACTGACCTTGACAAGAATGCCAAGAAGAAATCCTTGGTAGCC
AGTCGTATCAGCATTCGTCCAATCTCGCAACGACATAAAGAGGAAGTGCT
TGAAGAAGACATGTGTATTTTCTGCGGTGAACGAAACGAGAAATTTTCGA
ATGACGGAGTGCTAGATATTCACTATTGGAAGAGTTGCCCACTTCTTCAA
CGCTGTGCTGGTTGCTCTCAGGTGGTAGAAATCTGTTCACTGAGTGATCA
TTTGTTAAACGAATGTGACGTCCAACAGAATTACACTCAATGCAATAAAT
GTGGATTGGCTATCCTCAAAACACAAGCACAACAACACAAGAAGAGCCCG
ACTTGCAAAGTTCCAAGTAATTCAAGCAAGTTGACGTGTCCGCTATGTTT
CATACACGTTCAAGATACAGAAGAGCATTGGAAAACACACCTTGTGGAGA
AATGTAAAGTGAATTTGCAACGTTTGAAGAAAGGAGTGAAGAAGCCGGCA
GCAAATAGCGAACCGGTAACCAAGACAACACCGGCCCGAAACAGATCACA
AATACCAAGAGGGACCcacaaaacacccaaaaagaaataactttttttac
gcggtattatttttttatttatttttatgtaTAGTGGATGAGGGAAGAGC
GAAAAACATAGTATTTCCAGGGTGTGATTCAAAAAACTGAAGGTTGATAA
AGTAGCTGCAGACGAACATTTTAACTATCAGACAAACAGTTTTGTTTGTT
GATTTACATGTCGGCAGAATTCGTAAAGTCCGTATGGATTTTTTAGGCTG
CGTTGCAACCACTatgatttgtttttatatatcaaaacatGCAGCATAAG
TTTTTTCTTAATCATTAGATGTaaataaccaaaagttttttctgtttatt
tatttacaatgtATGAAAGATTTTTCTTACTCAAAGAGTGTACAATATAT
ACATAATGATGATGACATTTTAATTAattattgtcatttttttgcttttc
ttgaGACAATTCATGAATGAAACTGGattaattttatgaaatttttattc
aTCCACATTTTTCTGTGGAATGATTTTTATGGCTCAAAGTTTTTCGCCAT
CTTTTTAGTTTTATTGACTGTTGTTTTAGAGGGCTACTATTGGAG
Run BLAST on NCBI

transcript from alignment at sc0000304:146401..158053-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00018675 ID=TCONS_00018675|Name=TCONS_00018675|organism=Clytia hemisphaerica|type=transcript|length=11653bp|location=Sequence derived from alignment at sc0000304:146401..158053- (Clytia hemisphaerica)
AATAGATATATAAATCGAAATTTAAAATTATACATTACTTCCATTAAATT
CTAATTATTCGTTTTATAAATAGGTAGGTCCATTAAAGTATTACTTGTTT
TTTACTGTTTTTATTACGCTTTTTTCTCAATATAAAATTTAACTCTTTTG
ACAGGCGCCATGGAGATTGCTGAAAAGTCAAATTGAATTGATGCAGAAGT
TGATTAAAGACTTGGGTATGAATAAGCCAGGGTAAGATAGAGGTGCTTTT
TTGGCGGGAAATGAAACTTTTTAACGAAATTTTTAGTGTTATGTACCAAT
ACAGTTGATTCTCGATAACTTGGACGCTCACGGGGAACACAAATTTGTTC
GAGTTAAGATGTTTTGAGACGTGGAGTAGATTATAGGGCATTGTTACTGA
AGGGACGAGTTAAAGAGACTCCACTGCATTTGATTTAGACCTTTTTGATC
CATCCCCCCTAAATTCCTAGTAGACAGCATTTTAAATATTCTAATTATTT
TTTACAAGCATATTTAATCATGCCAAAAAGATCTGACTCATGGCTCTTTT
CTCCTATATTGTTGGCGAGATAGCCAGTTTACAGCTACACACCTCTTCTC
ATTTACAAAGATTGGACTTAGCAAACGGGTTTTCGTCACCAGGTTTCCCG
GAAAGGATGAAATTTACTTTTCCAAAGTCAAAGCTCAGATGTTCTAACGT
TTTCTTGATTCTAATTTTGAATTTCTTTTGTTATCGTTAACTTTTAGTGG
ATTTTCAACGGAAAATGTGATGAAGGTGTTACTCCTGGGTTTAGAACATC
CTCACAACGATGTCCGAGATGCTGCTTTGTCCTGTATCGTTGATGTCTAT
AAAATTGTAAGTGAATTCCCGTGGTCTCTACTTGTAATTGATTTATGAAA
CCAGCAATTGTTATTCTTATTCCCTACTCACACGGGAAGTTAACTACAGA
GAGATCAAATCTCGAAAGTTTGATGATTAATAGAAGTTTGAATTAGCGGA
AGTTAACGAGTCAGTCCAGAGTTCGTGTAAAATCTTTTCATCATTAGTCA
TTAAATTAACTCTCCTCCGGTCAACCTCATCAAATTTTCCTCTTCAAATT
TGACAAAATTTGATAAAACTTCCCAAGGTCATCCATTCATATTAGCTGTT
TTAGTGAAAAGAATTGATGCTTTATTTACCCTGTCAGTCGTCAAAATAAT
GTATACGTTCTCGCTGGTAACATATAACTTTAATACATTCTGTAGGCTCA
ATGAACCAGCTTGTTCCGGGGTATTTCTTCTTTTTTTCTTTCAGGTGAAA
GAGCCGTTGAAATCATTTTTCCCTCCTGATGACGCAAACACACGAAAGAA
TCCTCTTTATACCAAACTCTTCGATAGTCTTGATCGAGCAGATGGTAAAA
TGACTGAATCAGAGAAAAAGGTACACCGTCTTTCGTCACAAGCATGGGAG
GTGGGGCTTGAAAAAGTTATGAATCACCCTACATTCTTCTAGGCAATAAA
CACTATTTTTTTTAAAGTCCGTATATTTAGGACACTCGTTTGAGGTATCT
GAGCACACTACTGGCTAACGGTTATATAAAAAGTGTAGAGCTTAGGTCAA
TTTAGGTCAACATGGCAGATATCATCTGATCATGGAGGGGGGGGGGTATT
TTCCTTCGTTTCTCAATTTTAACCTTTGTGTGATTTTCATTCAGGCTGCA
ACGAAAAAGAAGAAAGAAGATGCAGAGAAAAGCAAAATGGAAGAGGTATG
ATGATTCTTTGTCGTAACTCAAAAATACTATGATCGGTCAGGGTATTGTA
ATGTTTATTCAATAGACTCGGTCCTTTGTCAGCAAGTTAGTGAGAGACGT
CAGTGTACCAGATCTTTCGTTTCATGAGAAAACTCTTTTTTCAATTCAAT
CTTTTTAATCTCTGCAATGTGACACATAAATGAAAGGCTATATGAGGTAT
CTTGATATTTTTGTGTCGAATATTCTCAGGTGAAAGCTTTACAAGCACAA
CTACAAGAAATGCGATCTTTGGCAAAAGCTCAAGTACAAGAAAATGAAAA
CGAGGCCAACCCTTCGACACGAGAAGAAAACAACAACACGAAAAATAATA
ATGGTACAAAAGCCACCAAAACTGACCTTGACAAGGTATTTAAACTTGTT
CAGGAAACTTATACTATGCATGGATAAGTGTTTGTAATCAAATCGTTTCA
CTTGAGAGCAATTTGGGGAAAATAGCACGAAGTTTATTTATGATGATCAG
AAAAACGTTCAAAAACTTTAAAATGAACCGAGGGTCTTATTTATTATGTA
ATTACTGATCTTATTTCCGTAACATCTTTCTCTATCGTACCATAGAATGC
CAAGAAGAAATCCTTGGTAGCCAGTCGTATCAGCATTCGTCCAATCTCGC
AACGACATAAAGGTTTGAATGTTTCTCATATCTTTGGAATGGTTCAGATT
ATTTGAAAAAGTAGCACCTTAAGGATGGCTCTTGCAGTGCAAATCCAATA
TTTTGAGGCAAACCTTTTTTGCCACCTTGTGTAAACCCGTGGAAACCACT
CTCAAAGGATTTAGTCTAATTACGTTAATATGGTTTCCACATATAGTAGC
AAAAACGCGTACTCTTCAAGCGGCGAATGCACTTTCATACGAATCCTATC
AAATTTGCGTTGCCACTACATTTTGCCGTCATTTCCCTAGTTTAATGCGT
CTTCTAATTAATGCGGGTAAAGTATTTCTGGTTGAATGTCTCTCCTCTAA
ATATCAACGCNTCTAATTAATGCGGGTAAAGTATTTCTGGTTGAGTGTCT
CTCCTCTAAATATCAACGCGGGCACTTTTCTCAATACCAAATCAAGGAAC
TTGATCAAATCAAAATAATAAAATTGTAAATAAAAAAGATCCTCATCTGT
TTCTATGGCTGCAGAATGGAATTGGCATTCGGCATCCATTCTTCGCAAAT
TAAAAATATCCATATTATTGAACTTATCTGCTTTATTGTTTTAACAACCA
ACATAGTGAGGCTAGACTCAGAATTACCTCCAATTATTTTAAAGTAATTT
CCTTCTATTATCAGCGCAGCCGTACTAAATTTGAGAAATGACGGTACCTG
CAATGTTACTAAACATTTCACCTCTTTCACTATTCTCACATTCAGAGGAA
GTGCTTGAAGAAGACATGTGTATTTTCTGCGGTGAACGAAACGAGAAATT
TTCGAATGACGGAGTGCTAGATATTCACTATTGGAAGAGTTGCCCACTTC
TTCAACGCTGTGCTGGTTGCTCTCAGGTGAGTTGTTGTCTAGCGGTCGGG
AATCTGCTTCCCAATTTTCCTGATTTTTATTCCTTGTTTTTTTTTCATTT
CTGTTTTTCAATGTTCTAAGGAACAGTTGCAACAGACAAAAATTTCTATA
TTCTAGCAACGTTATTTTTGGACTAGGAAAGAAAGGCAAATAACTTTCCC
GTCCGCCCTTTTAGGAATTAAAAACCCAAAACAATAGAGATCTATCAAAA
TCTCTCCGCCTTTATTCATAAAGTTGCTAACCCTTAAACGCTTTTTAGTA
TAGCTTTATAAGAAACATAAACGTTTTTTTAATAAGAACAATCGAACAAT
CCTGAGTCTGGAATCGCTTAATTAAAAAAACAAGTGTCAAATCACTAAAA
GGACTGTGCAATGGCGAAAAAACTAAAATCTTACCCTAAAAAAGTTAAGA
ACAGCCAACTGGTTTTTTTGTAAAACTGGTTCTTGTTTTTATAAGAACAA
ACTATATAAGAACATAAGTCTTCGATGGCAAAAATGTTAAGAACAAGTTA
AGAACATTTTAAAGGCTTTTCAGACTCTAAAACACCCGATTTCTTAGGAA
AATGGATAAAAAATGCTCACAAAACGGTGAAAATGTACTGAAAAAGTTAA
GAACATCCGAAGGCTTCAAAAATTTTGGATGTTCTTATAAAAAATACGTG
TAGAAAATCTCAGCAAAAAAATTTCGGCATTAACTTGTCAATTCAACTGA
GCTAATTATCATATTTGTGAGGATATAGACATCAATAATTGTTTTGATTT
CATATACAGTAATTATAAGTTGTTTTTGAACTGTGTAGAAAACATACACA
CCCCTCCTCTAAATAGTCAGGGAATTCAAAATAATTAGCGGTGCCCGAAA
TAAACAAAATGTTATTTTTCTTGATGCATTCAAACAGACATTTTAGTTAT
AGTTGTTGTAGAAGACCTATGGCGGAGAGCTGATAAGTAAAGTAGCAGGA
GTGTATTGTCTTCGAATGCGCTCGTCCGCGGTATCTTAAAATGTAAACAC
ATTGCATCTATTTTGTACTAGTATAAAGTTACAGTATAAAAGGTGTTCAA
CATTTTGCTCTCAGAAAAGAAACAAATGTGTGAATATTATTCGCACCTCA
CCATTCTACAAGATCTTTTGCTAAACAAAACATCTGAAAGATATAATTGA
TAAACTTTCTCTCTGTGAAGCAGATGTATTGAGTAGCGGCTTGGAAACTT
GATACAAAAAATGAAAAAGTTTCACTTCATTTATGCTGTTGAGTGTTCAG
TGTTGCTAGTTGTTTTCGAATGAAGAAAGTTTCTTGAAGAAGTTGAGTAA
AGATGGTTTTAACTAAAGAGCAGAGTGGACTTTCATGCGATAATGTGAAC
TGGATACCAGAGACAGTCCATTTCTACAACAATCAAGATACGATCACCCA
CGATGAGAAAACTGGGTTATTATCCTACCCGAAAAAAGACTTCCTAACTG
TTCCTGTCCATCACACATCTTCCCATAAAAGTTACCAATCTATTTCGCCG
TCCGACTCCTTCCAAGAATCATGCCACTCCGATATCTCAACACGTTCCAT
CTTACTAACGTACAACGGAAATACGGGAACGCTCGGTGGAGGAATAAGCC
TCGTAATGACCGTAGCTTCAATTTTACCGTTTCTCCAAGGAGCATCCGTC
TTCTCTCTACCATACGCTTTCGTGACTGCTGGCAAAGCGTTCTTACCCGC
TTTTCTGACAGTGAACTATTTGGCGACGCTCTGTTCCAGACTTCTTATGG
ACAGCATTTATGTTACCTCACCAGACGGTACGCATCGACATCGAATCTAT
AACAGTTATGCGGACCTAGCGTTCGCTTGTTGGGGACAGTTCGGAGCAGT
GATCATGAAAATCTTAAATTACCTTTTCTTTCTGTTAGTAAACGTTGTGA
ACTGTGTGTTGTTTTTGCGTTGTTTGGATAACATGCTTGTTGGTCAAGAC
AAGGTGACACCGTTCCAAATACAATGTGTTTTGCTGGTCCTGTTGATCCC
TATTGTTCTGGCCATCAAAGATGTCTCCATATTTTCATACTTTGGTTTAT
TTAGCACCTTATCTGTCCTGTTGGCATGTGTAATGTCCATGTTTGTTTTG
ATCCAAAGGTCTGATCGTTGGATAGAGAATTTTGAGCTCCTGCCTGTCAT
CGATTGGGGGAAATATCGTGCTTCTTTGGGAATCACTATGCTGACAATGT
TCGTGGCACCAACGCTTCCTGGCTTCGAAAGCGTGATGGCAGAACCCAAA
CGATTCCCCACCGCTATCAACATCGCATTCGGGGTCTCGGGCTCCTTCAA
GGCGGTTTTCGGCGTCATCGGTGCCTTATCATTTGGGAGTGTTACACAAG
AAATGCTAGCGACAAATATTTCGGAGAGCTCACTGACTCTCAGATTTGTG
GTTGGTTCAATGCTTATTATCAACACTCTACTAAATATTACTTTCTTCAT
GTTCACCTTACTCGATTCAATCGATTGTTTCGTTTACCAACACATTTCAG
CCAGAATCTCAAGTGAACTGAAATTCTCAATCCCATGGAAATTGACGTCC
CGTATTGTCTACTTGATCATTGTACTGGCCACCAGTCAACTCTTACCCTT
CTTCGCCCTCGCCAGTGGCGTCATTGGGGCCGTTCTCATCTCCATACTCG
GCTTCATAGCGCCAGTCCTGTTTCATTTAACATTGAAATGGCACGTCTTG
AGCATCCAGCAGCGTTTTGGAGAATTGATGTTGTTGTTCTTGACCATATT
TGTTGGCGCAACGGCCTCTCATTCTTCTTGCTACGAACTTGTGAAGGAGG
TCAAAAAATATCACGGACTTTATAAGCACACTTAAAGGAAATTGTTGTAT
AAATAAAATAGCCAGAAAATTAAAGTTGTAATTCAAAAAACATTTCGACA
AATATTTTTCAGCATAAGCTTTTCGTTTTATTAAAAAACATCATCAGTGC
ATATACAATAAAACGAAAAGCTTAAGCTGAAAAATATTTGTCGAAATGTT
TTTTGAATCATAACTAAAAGAAACTAATTTGGTCATTTTGCGATTTTGGA
TTATAGTAATAGCAACTGCCTTTGAGCTTTTATTTTAGTTTTTTTATTTG
ATAATTAGATTTCCAGTTTTCGTGTAGCTCTTCTGTTAAAGTTGTTTTAA
ACTTCAGTCTCTTTTGGTTTTCATTTTTGTTGTGATTTTCTTTGAAGAGT
AAGCCTAAAATTATTGTTTTAAACTTGTATATATTATCTACTTATTTGTT
CAAAGAAAATGTATATATAACCCCCTCATTTATCTACACTCTTCAATCTA
TACCAGTAGAAACTTGATTCCGAATAAGCAAAATGGGATGTCGTTCTTTC
TCTAATTTAGTGCGTCCTCTAATTCATGCGGATAAATTATTTTGTCAAAG
TCGGACCAATTTATTTCCTCTAAAAATTAGTGCAGACGCTTTCTGGTTTT
CCTCTAATTTAATACGGTAAAGGTCGAATCTTCCTCTAATTATAGTGTGG
ATTCCTGCTAAGTTTACTTTTCAAACAGAAAATATTGAACTCTATAAGCA
AATGAACGAAAGACATTGGAAAAAATCGAAAAATATGAAGAAAGCAGAAA
AATAGATAAACTGAAATTTTCCTCTAATTTTTAGTGCGGCACCTCCAAAA
TAATTATGTAATCTGACGCACTAAATTAGAGAAATGACGGTATGAGACTG
TGCCACTGGTTAAGGTTAAATTTTGAAAATTGTTCCTGACAAGGTTAGTC
ACTTCAACCACTTCTCAGGAAAAAAATTCGGCAAAAGTTTGTCTGACAGG
GTCCAATTTCTGCTAAATGGTAATTTCTGACTAAGTTCTTTCGAACTCAA
TTGACACGACCTCGCTGTACGTCAAGGTCAATACTCCCTCTCCCTGCCAT
CCTCTCAGTTATTGATTCCCATACCTCTTCGCGTCAAATATACGTAGTTT
CACCTCTTCCTTCAGGTGGTAGAAATCTGTTCACTGAGTGATCATTTGTT
AAACGAATGTGACGTCCAACAGAATTACACTCAATGCAATAAATGTGGAT
TGGCTATCCTCAAAACACAAGCACAACAACACAAGAAGAGCCCGACTTGC
AAAGGTATTCACTTATACTCCCTTAAGGCCAGTCTCCACTTTCGCGCGAA
ATGGGCGACAGTTTTTTTCTTAACCTTTTTTGGCTGAAGAAAAGATTCCG
TCATAAAAAGTTTCGCGCAAACAAAAAAAAGTTGAAGGAAGTTCTACTTT
TTTCATCCGTTACGTCAATTTCGACCAATGGAGTTGCTTCATTTTTCAAC
CGACCAATGACCTTACAAAAACGTCAAAAAGTTTTCGATCATGTCGAGCG
AAAGTGGAGACCGGCCTTTAAAGGTCATTGGTCATTGGTCAACTTTTTTT
TTGTTCGTGCGAAACTTTTTTATGGCGTAATCTTTTCTTCAGGCAAAAAG
GTTAAGAAAAAAAACTGTAGAAAGAGTCAGGCCTTAACAAAAACTTCAAA
AAGTTTTCGCTCATTTCGTGCGAAAGTGAAAACCGGCCTTTATAGGTGGC
TAAGCATAACAGTTCTGCGTTTAGTTAAAAAAGCATGAAACACAGACGTA
CCTAATAATATTCTGAAAAAAAAAATTTGAAAAAAAAGTTCAAACAGTGC
ATTGAGATTTGGGCAGGAATTTGTGGTAACAGCTAAATTTTCGGTTGTAC
AGGGCCCTTTACACATACCAGTTTTCTTTGCTGAAATGATCAAAAAGAGG
GTTTATAAAATTTACACATTATCCATTCTTGATCGGTCCTTTTGATTTTT
TTTTTCACAAGTGTTTTATAGTTTATACTTTCATTTACATTTGTCATTTC
TTTCCATCAGTTCCAAGTAATTCAAGCAAGTTGACGTGTCCGCTATGTTT
CATACACGTTCAAGATACAGAAGAGGTTAGTGACGCTTTCTTTCCAAATT
CACTGAAGATTGAGAATTTAACAATTGTATGTATATATGTCCGTCTCTAC
GCCTATCTGTCTTTTTGGCAGGTTGGAGACTTCAAAAATGGTCTGATTTG
ACTGAAATTGAAAACACTTGATCCTTGAATCCGTGGGGATTGTTTGTTTC
ATTTTTCAAAATTTTGTTTTCTTTTTCAAAGTTTTCACTTAGTTTTTTCA
TCAACTTTACAATTGGGCCTAGAATTAACTAAGTTGAAAATAACTGAGGT
TGAGCCAGTGCCGGTTAGCACGCTTGACAGTGTTTTTGATTAATTTACAA
AATCATGGTGTCTGCTTCTGAAGGTGGAGAATCTTTCATCAAGACTTTCA
TTCCTCGCCAATAGAATATATAGTATCTGAGTTGTTTCGATTGCAATAAA
AAGAAAGGTTTCTTGAGATACGGATTGTCTTTGAATGATCAGAACTCTCA
TTACTTTTACCTGACGAACCAGTGGTCATTGAGTTTTGTCCGTTCAGCGT
ATTCACTTGCTAAAAGCTAGGTAGGGCTTGTGAGAGGTTGAGTTTTAAAC
GCTGCTTTAACCATTGGTTATATATCTAGCTAAAGTTTATTTTAAAGTTA
ATAATATAAGAAATGTCGAGCGACTCAATGTCTTGGGTGGAAAATTTTCG
AAAAATAATTAGCGGGGACGCTTATTAGTTTTACCCGAGAGTACTTCTCT
TTTTTTCAGCATTGGAAAACACACCTTGTGGAGAAATGTAAAGTGAATTT
GCAACGTTTGAAGAAAGGAGGTAAGTCATCAATTCTCTCTCAAAGGGAGT
TTCTAAACATCGACCAGAAATGGCGACCACGACCGCGACCACGACCAGCG
ACCAGATAAATTTGGGTTATCGAGTTTAAAACCCTTTCTCCAACGTAGAG
TGTCCTCGTCATTTGAATATATCATATTGTAAGTATCATATGAGTAAGCT
CACCCCTGTCTCGTCATGTGCCCAAATGCGTAAAACAACTATTTTGATGC
TCTTGGAGCTTGATTATGGTGTTGATTTTTATCCTTTTGTATTATCAGCA
TCAAAATAATTAGCGGCACAAAATTTTGTTTGAGAAGCTTTGTATTTCAT
CATCAGAGTGTTATTTCTGTCGCAATTAGTCATTTTGTCGGCATAAAGAC
AATAAGATAATTGATCAGATTCATATCTGTAAAACTGGTCTTCCCGATTT
TTCCCTACTGACAAGTTCTATCTATTCATACTAAAGGCATCTCATCCAGC
TTAATTAAAATATTCGGTGTACCAAAGCTTACAGACACCATACTTAATGA
CCCTGTCAATATTTTTGTCAAATAGTGTCACTTTGTCAAGAAAATGACTG
GTTACTTCAAAGGTCACTTTTTAGTATTCTGAGGACTTGGTGTAGATATT
CTCTACGGTGGAGAGAGCAGATAAACTCGACAACATACCAGATAAAATTT
ATCTGGTCGCCGGTCGTGGTTGCCATTTCTGGTCGATGTTTAGAAGCTCC
CTCTCTCAAAACTTCCCTGTCTCGATTGTAAGCTGGGTTGGTGACTATTT
TCGCCTTTCCCGGCGCCATCATGCCAGTCTTCGTGGAACTTGTATTGAGT
GTCTCTGATCTGTTCATTTCTCACTTTCTTTCCTTATATTTTGGTAATCT
ATCCACAAAGGGTTGCCAATTATTACAGAAATATCTAAAAATGTTAGACA
AAGTAAAAACCAAAAATTTGGTAATGTAACCTAGATTGGTCATTTTTCCG
TCATTTTCAAAAGCTGTAGTTTAACATGCATTCTTTTTTGGACCTACCCC
GGTGGAGGTCCTATAAATTAACCTTTGTCCGTTCGTTCGTTCGTCTGTTC
GGTCGTTCGTTCGTTATTAGCTTGATTTTTTGCACTTTTTTGGCAAATTT
GGGCCAAAAAACGGCTAAAAAACGGGTTTTTTGGACTTTGTGAAAAATTA
GGTCGTTAATTTTTTCTGATTTTTTGCATGAAAGTAAGGTACCATCATAG
GTAAAATACGGTACAAGCAGATTTTTGCAAAAAAATTTAGTTGGCTCAAA
AAAACCCATGTTTATCTATAAGAATCACTATTAATAAGCATACATCAATG
TTCTTAGTCAAATTGCTAAATTTTTTTATGAGATAGATGTTTTTTTTGCT
CATGAGGGCTTACTTTTAAAGAATATATGTGTTTAGATATGAAATTTTGG
TTGCTTGGCTTGTTTTTATAGAAAAACTGGCCAAATTCGATATTTTTTTA
TAAGCACACTATCAATTACTTAAGTATTAGCTTTTCTCGAGATTGGCTCT
TTTATTCTTTATGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGA
ATGTGACGGAGCTCGATTTTTGGAAAAAAAGTTTTGGGGTAAATTTCAGC
TAAAAAACGGCTAAAAAAAGGGTTTTTTTGGACTTGTTATTTTCTGCCTT
TTTGCATGGCTCAAGTAGATTTTTGTAAAAAAAGAATTTTTCAGCTCAAA
AAACGCATATTTATCTATAAGAATCACTATTAATTACATCAATATGCATC
AATGTTCTTAAAATTACTGAATTTTTTGATGAGATGTTTTTTTGCTCTCG
AAGTCTTGAATATGAAAGAATATTTCAAGAGCATGAAGNNTCTGAATGAT
TGTTTAATGGTCACGCTTATGTAGATATCAATTATATATGTGTTAAATGC
ATAACCAGGTAGGTCCATAAAAGTATCACTTGTTTGTCTTACAGTGAAGA
AGCCGGCAGCAAATAGCGAACCGGTAACCAAGACAACACCGGCCCGAAAC
AGATCACAAATACCAAGAGGGACCCACAAAACACCCAAAAAGAAATAACT
TTTTTTACGCGGTATTATTTTTTTATTTATTTTTATGTATAGTGGATGAG
GGAAGAGCGAAAAACATAGTATTTCCAGGGTGTGATTCAAAAAACTGAAG
GTTGATAAAGTAGCTGCAGACGAACATTTTAACTATCAGACAAACAGTTT
TGTTTGTTGATTTACATGTCGGCAGAATTCGTAAAGTCCGTATGGATTTT
TTAGGCTGCGTTGCAACCACTATGATTTGTTTTTATATATCAAAACATGC
AGCATAAGTTTTTTCTTAATCATTAGATGTAAATAACCAAAAGTTTTTTC
TGTTTATTTATTTACAATGTATGAAAGATTTTTCTTACTCAAAGAGTGTA
CAATATATACATAATGATGATGACATTTTAATTAATTATTGTCATTTTTT
TGCTTTTCTTGAGACAATTCATGAATGAAACTGGATTAATTTTATGAAAT
TTTTATTCATCCACATTTTTCTGTGGAATGATTTTTATGGCTCAAAGTTT
TTCGCCATCTTTTTAGTTTTATTGACTGTTGTTTTAGAGGGCTACTATTG
GAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_010446XLOC_010446Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00018675-exon-sc0000304-1575043694:157823..158053TCONS_00018675-exon-sc0000304-1575043694:157823..158053Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:157198..157306TCONS_00018675-exon-sc0000304-1575043694:157198..157306Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:156634..156759TCONS_00018675-exon-sc0000304-1575043694:156634..156759Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:156309..156359TCONS_00018675-exon-sc0000304-1575043694:156309..156359Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:155919..156074TCONS_00018675-exon-sc0000304-1575043694:155919..156074Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:155642..155708TCONS_00018675-exon-sc0000304-1575043694:155642..155708Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:154778..154908TCONS_00018675-exon-sc0000304-1575043694:154778..154908Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:150650..150788TCONS_00018675-exon-sc0000304-1575043694:150650..150788Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:149829..149893TCONS_00018675-exon-sc0000304-1575043694:149829..149893Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:149034..149094TCONS_00018675-exon-sc0000304-1575043694:149034..149094Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1575043694:146401..147059TCONS_00018675-exon-sc0000304-1575043694:146401..147059Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:157823..158053TCONS_00018675-exon-sc0000304-1510915933:157823..158053Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:157198..157306TCONS_00018675-exon-sc0000304-1510915933:157198..157306Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:156634..156759TCONS_00018675-exon-sc0000304-1510915933:156634..156759Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:156309..156359TCONS_00018675-exon-sc0000304-1510915933:156309..156359Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:155919..156074TCONS_00018675-exon-sc0000304-1510915933:155919..156074Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:155642..155708TCONS_00018675-exon-sc0000304-1510915933:155642..155708Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:154778..154908TCONS_00018675-exon-sc0000304-1510915933:154778..154908Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:150650..150788TCONS_00018675-exon-sc0000304-1510915933:150650..150788Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:149829..149893TCONS_00018675-exon-sc0000304-1510915933:149829..149893Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:149034..149094TCONS_00018675-exon-sc0000304-1510915933:149034..149094Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1510915933:146401..147059TCONS_00018675-exon-sc0000304-1510915933:146401..147059Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:157823..158053TCONS_00018675-exon-sc0000304-1491911889:157823..158053Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:157198..157306TCONS_00018675-exon-sc0000304-1491911889:157198..157306Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:156634..156759TCONS_00018675-exon-sc0000304-1491911889:156634..156759Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:156309..156359TCONS_00018675-exon-sc0000304-1491911889:156309..156359Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:155919..156074TCONS_00018675-exon-sc0000304-1491911889:155919..156074Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:155642..155708TCONS_00018675-exon-sc0000304-1491911889:155642..155708Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:154778..154908TCONS_00018675-exon-sc0000304-1491911889:154778..154908Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:150650..150788TCONS_00018675-exon-sc0000304-1491911889:150650..150788Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:149829..149893TCONS_00018675-exon-sc0000304-1491911889:149829..149893Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:149034..149094TCONS_00018675-exon-sc0000304-1491911889:149034..149094Clytia hemisphaericaexon
TCONS_00018675-exon-sc0000304-1491911889:146401..147059TCONS_00018675-exon-sc0000304-1491911889:146401..147059Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000304supercontigsc0000304:146401..158053 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
33.4361	28.396	32.4317	34.352	27.016	21.7868	24.8716	27.7204	18.5834	22.259	17.4966	18.9619	7.80813	9.93311	5.42278	6.6078	6.68788	7.43327	8.99085	10.2197	4.86522	5.38555	5.54408	5.08535	10.2416	10.8812	4.09261	3.81653	7.40424	7.27483
Blast
[Close]
BLAST of TCONS_00018675 vs. Swiss-Prot (Human)
Match: CE104 (Centrosomal protein of 104 kDa OS=Homo sapiens GN=CEP104 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.207e-49
Identity = 130/356 (36.52%), Postives = 196/356 (55.06%), Query Frame = 2 
Query:  167 LLKSQIELMQKLIKDLGMNKPGGFSTENVMKVLLLGLEHPHNDVRDAALSCIVDVYKIVKEPLKSFFPPDDANTRKNPLYTKLFDSLDRADGXXXXXXXXXXXXXXXXXXXXXXXXXVKALQAQLQEMRSLAKAQVQENENEANPSTREEXXXXXXXXXXXXXXXDLDKNAKKKSLVASRISIRPISQRHKEEVLEEDMCIFCGERNEKFSNDGVLDIHYWKSCPLLQRCAGCSQVVEICSLSDHLLNECDVQQNYTQCNKCGLAILKTQAQQHKKSPTCKVPSNSSKLT--CPLCFIHVQDTEEHWKTHLV--EKCKVNLQRLKKGVKKPA---ANSEPVTKTTP--ARNRSQIP 1207
            L  SQ+ L+ +L+KDLG     GF+ +NVMK  +  LEH   +VR+ A+  I+D+Y+  +  +  + PPDD+NTR+N LY  +F+   + DG+ T++E +A  K   E+AEK K EE+KALQ QL  ++ + +A+VQE E++A     ++                       K+  A  + I        +E   +++CIFCGER+E F+ +G LD+HYWK C +L RC  C QVVEI SL++HLL ECD +  + +C +C  A+ K +  +H K   C  P+   KL   CPLC  +    EE WK HL+    C +NL++     K PA     S  V  + P  ++  S+IP
Sbjct:  583 LAMSQMGLLARLLKDLGTGS-SGFTIDNVMKFSVSALEHRVYEVRETAVRIILDMYRQHQASILEYLPPDDSNTRRNILYKTIFEGFAKIDGRATDAEMRARRKAATEEAEKQKKEEIKALQGQLAALKEI-QAEVQEKESDAVKPKNQDIQGG-------------------KAAPAEALGI-------PDEHYLDNLCIFCGERSESFTEEG-LDLHYWKHCLMLTRCDHCKQVVEISSLTEHLLTECDKKDGFGKCYRCSEAVFKEELPRHIKHKDCN-PAKPEKLANRCPLCHENFSPGEEAWKAHLMGPAGCTMNLRKTHILQKAPALQPGKSSAVAASGPLGSKAGSKIP 908
The following BLAST results are available for this feature:
BLAST of TCONS_00018675 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CE1043.207e-4936.52Centrosomal protein of 104 kDa OS=Homo sapiens GN=... [more]
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