|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018660 ID=TCONS_00018660|Name=TCONS_00018660|organism=Clytia hemisphaerica|type=transcript|length=953bp
GGGCAACTGATGATTTTGGAGACAGAAGTTGGTGCAAATGAAGGTTTTGG
TGATTACATTTGGTGCAACTGATGGTATTGATGATTGCATTTGGTGcaat
tgatggttttggtgattGCATTTGGTGCAACTGATGGTTTTGATGATTGC
ATTTGGTTCAATCGATGGTTTTGGTGATTGCATTTGGTGCAATCGATGAT
TTTGGTAATTGAATTGGTGCAATCGATAGTTTTGGTGGTTGGATTTTGTG
CAACTGATGTTATTGGTGATTGCATTTGTACAATTGGTTTTAATGATTGC
ATTTGGTGCAATTAATGATTTTGGTGATTACATTTGGTGCAACTGATGGT
ATTGATGATTACATTTGGTGCAGCTGATGGTATTGATGATTGCATTTGGT
GCAACTGATGGTTTTGATGATTGCATTTGGTGCCACTGATGGTATTGATG
ATTACATTTGATGCAACTGATGGTATTGATGATTGCATTTGGTGCAACTG
ATGGTATTGATGATTGCATTTGGTGCAACTGATGGTATTGATGATTGCAT
TTGGTGCAACTGATGGTATTGATGATTGCATTTGGTGCAACTGATGGTAT
TGATGATTGCATTTGGTGCAACTGATGGTATTGATGATTGCATTTGGTGC
AACTGATGGTATTGATGATTGCATTTGGTGCAACTGATGGTATTGATGAT
TGCATTTGGTGCAATTAATGATTTTGGTGATTGAATTTGTAcaattgatg
gttttggtgattGTATTTGGTGCAACTGATGATTTTGGAGATAGAAGTTG
GTGTAAATAAAGGTTTTGGTGATTTCATTTGGTGCAAGTGATGGTATTGA
TGATTGCATTTGGTGCAATTAATGATTTTGGTGATTGCACTTGTGcaatt
gatggttttggtgattGTATTTGATGCAATTGATGGTTTTTAGTGATTAC
TTT Run BLAST on NCBI transcript from alignment at sc0000304:237640..238652+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018660 ID=TCONS_00018660|Name=TCONS_00018660|organism=Clytia hemisphaerica|type=transcript|length=1013bp|location=Sequence derived from alignment at sc0000304:237640..238652+ (Clytia hemisphaerica)
GGGCAACTGATGATTTTGGAGACAGAAGTTGGTGCAAATGAAGGTTTTGG
TGATTACATTTGGTGCAACTGATGGTATTGATGATTGCATTTGGTGcaat
tgatggttttggtgattGCATTTGGTGCAACTGATGGTTTTGATGATTGC
ATTTGGTTCAATCGATGGTTTTGGTGATTGCATTTGGTGCAATCGATGAT
TTTGGTGATTGTTTTAGTGCAATTGATAGTTTCGGTGATTACATTTGTGC
AATTGATAATTTAGGTAATTGAATTGGTGCAATCGATAGTTTTGGTGGTT
GGATTTTGTGCAACTGATGTTATTGGTGATTGCATTTGTACAATTGGTTT
TAATGATTGCATTTGGTGCAATTAATGATTTTGGTGATTACATTTGGTGC
AACTGATGGTATTGATGATTACATTTGGTGCAGCTGATGGTATTGATGAT
TGCATTTGGTGCAACTGATGGTTTTGATGATTGCATTTGGTGCCACTGAT
GGTATTGATGATTACATTTGATGCAACTGATGGTATTGATGATTGCATTT
GGTGCAACTGATGGTATTGATGATTGCATTTGGTGCAACTGATGGTATTG
ATGATTGCATTTGGTGCAACTGATGGTATTGATGATTGCATTTGGTGCAA
CTGATGGTATTGATGATTGCATTTGGTGCAACTGATGGTATTGATGATTG
CATTTGGTGCAACTGATGGTATTGATGATTGCATTTGGTGCAACTGATGG
TATTGATGATTGCATTTGGTGCAATTAATGATTTTGGTGATTGAATTTGT
AcaattgatggttttggtgattGTATTTGGTGCAACTGATGATTTTGGAG
ATAGAAGTTGGTGTAAATAAAGGTTTTGGTGATTTCATTTGGTGCAAGTG
ATGGTATTGATGATTGCATTTGGTGCAATTAATGATTTTGGTGATTGCAC
TTGTGcaattgatggttttggtgattGTATTTGATGCAATTGATGGTTTT
TAGTGATTACTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018660-exon-sc0000304-1491911889:237640..237843 | TCONS_00018660-exon-sc0000304-1491911889:237640..237843 | Clytia hemisphaerica | exon |
| TCONS_00018660-exon-sc0000304-1510915933:237640..237843 | TCONS_00018660-exon-sc0000304-1510915933:237640..237843 | Clytia hemisphaerica | exon |
| TCONS_00018660-exon-sc0000304-1575043694:237640..237843 | TCONS_00018660-exon-sc0000304-1575043694:237640..237843 | Clytia hemisphaerica | exon |
| TCONS_00018660-exon-sc0000304-1491911889:237904..238652 | TCONS_00018660-exon-sc0000304-1491911889:237904..238652 | Clytia hemisphaerica | exon |
| TCONS_00018660-exon-sc0000304-1510915933:237904..238652 | TCONS_00018660-exon-sc0000304-1510915933:237904..238652 | Clytia hemisphaerica | exon |
| TCONS_00018660-exon-sc0000304-1575043694:237904..238652 | TCONS_00018660-exon-sc0000304-1575043694:237904..238652 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000304 | supercontig | sc0000304:237640..238652 + |
Blast
The following BLAST results are available for this feature:
|
