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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018502 ID=TCONS_00018502|Name=TCONS_00018502|organism=Clytia hemisphaerica|type=transcript|length=414bp
CCTCTCCAACACTGTCTATTATTATGGCATTCTTTTAATTAGATTTCACT
ATCAAATAATCTATGTCATCATAACCTGGTAAGAAACATATAGAGTAGTA
CCCTCTGGCATTACCCCATGATTATCCCTCCTTACAACAGAGAAATATTT
ACACATGCAATTTTGTTTGGTTGGCtgataaaaatctttaaaagaactCA
AACGTAGCAAGCATCAGGCTGGAATCAGTTAAAAGTTCACAATTCCGTTT
AGATATTAactcatattttttcatttagttaaacaaattaagaacaatgg
CTAAAGGTGTAAGAGTAAACAAAGTTAGTTTGatttacATCCACACGCCA
AAAGAAGATGGCAAGGAAGATGATGCAGCGACGAGAAAGAGCTAAATCAC
AAATGGATGGTAAG Run BLAST on NCBI transcript from alignment at sc0000301:198526..199513+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018502 ID=TCONS_00018502|Name=TCONS_00018502|organism=Clytia hemisphaerica|type=transcript|length=988bp|location=Sequence derived from alignment at sc0000301:198526..199513+ (Clytia hemisphaerica)
CCTCTCCAACACTGTCTATTATTATGGCATTCTTTTAATTAGATTTCACT
ATCAAATAATCTATGTCATCATAACCTGGTAAGAAACATATAGAGTAGTA
CCCTCTGGCATTACCCCATGATTATCCCTCCTTACAACAGAGAAATATTT
ACACATGCAATTTTGTTTGGTTGGCtgataaaaatctttaaaagaactCA
AACGTAGCAAGCATCAGGCTGGAATCAGTTAAAAGTTCACAATTCCGTTT
AGATATTAactcatattttttcatttagttaaacaaattaagaacaatgg
CTAAAGGTGTAAGAGTAAACAAAGTTAGTTTGGTAAGTAAATCCTTGATT
GGCTTATTTACCTAAATTTACTGTGCTTATTTGTTTCAGAGATTGGGCTT
AACAAGAACACtaagaaaatattataaatattgtctttttttctacttcA
GACTAAGTACTCTTAgtttccaaataaacggccNGTTTTACATTCAATTA
AAAGTAcaggaaatatgacttttctttaAGCCAATCTGACTGCTTAATTA
TAcatttcaagttgacgataatGAACATTGTACTGTATGGTTATGTATGT
GTAATAATGGTAGAAATCCACAGACTATCGAAAATAGACTTGTAAATGTC
GGAATTTAGGCGAAAGTagaaaaaatgtagtgtttctggaatgggggtga
aggaaaaaagctctcatgcggccggccagaaaaaacaactttaaagataa
ctttaaTGTACagacagtatgaagtaagccctgaatactaatgtatcaac
taaaAGTCTGCGGCCcggtcagaattttttttttttcgccttTTATGGTC
AAATAAAGTATAAAGAATTCATCACTTGTTACTATTAttcccttttttat
tttcagatttacATCCACACGCCAAAAGAAGATGGCAAGGAAGATGATGC
AGCGACGAGAAAGAGCTAAATCACAAATGGATGGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018502-exon-sc0000301-1491911889:198526..198857 | TCONS_00018502-exon-sc0000301-1491911889:198526..198857 | Clytia hemisphaerica | exon |
| TCONS_00018502-exon-sc0000301-1510915933:198526..198857 | TCONS_00018502-exon-sc0000301-1510915933:198526..198857 | Clytia hemisphaerica | exon |
| TCONS_00018502-exon-sc0000301-1575043694:198526..198857 | TCONS_00018502-exon-sc0000301-1575043694:198526..198857 | Clytia hemisphaerica | exon |
| TCONS_00018502-exon-sc0000301-1491911889:199432..199513 | TCONS_00018502-exon-sc0000301-1491911889:199432..199513 | Clytia hemisphaerica | exon |
| TCONS_00018502-exon-sc0000301-1510915933:199432..199513 | TCONS_00018502-exon-sc0000301-1510915933:199432..199513 | Clytia hemisphaerica | exon |
| TCONS_00018502-exon-sc0000301-1575043694:199432..199513 | TCONS_00018502-exon-sc0000301-1575043694:199432..199513 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000301 | supercontig | sc0000301:198526..199513 + |
Blast
The following BLAST results are available for this feature:
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