TCONS_00018383 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00018383
Unique Name	TCONS_00018383
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1455

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000297:30251..34070-
coding sequence from alignment at sc0000297:30251..34070-

transcript sequence

>TCONS_00018383 ID=TCONS_00018383|Name=TCONS_00018383|organism=Clytia hemisphaerica|type=transcript|length=1455bp
AAAAAGCAgcataatattttcatttgttttgttATTTCACAATTTAGTAG
ACAATGTCttggtttggaaattttgaaaatgaacagGGCTTCTTTGAGTC
TCTGTGTTATAAAGTGATTAAAATGGGACAAATGCCAAAACATGTGGCAG
TAATAATGGATGGAAACAGACGCTatgctaaaaaagaaaatatatcaagA
AAAGAAGGACACACAGCTGGTTTTGATAAACTTGCTCAGGTGCTTTATTG
GTGTCACGAATTAGATATACCAGAAGTTACTTGTTATGCTTTCAGTATCG
AAAACTTCAAGAGAAGCAAACAAGAAGTGGACACCcttatcaatattttt
aatgaTAAATTGGCTCAATTAATGAAAGAAAAGGACCGTCTGATGAAATA
TGGAGTTTGTATTCGTTTTGTGGGTGAtatatctttgtttgatttgaaaa
taaagaaatctgTTGCAGATGTAGTGGAAATGACAAAAAGTAACAACAAA
TGCTTTCTGAACATTGCAATGGCCTACACTTCAAGGGATGAAATAGCTCA
GGCTGTTCGTGAAGTTTGTAAAGGAGTCAAGGATGGGTTAATCAAAGAGA
GtGATATCACAGAATCCTTGCTTGAATCTTGTTTCTACACCAACCATTGT
AAACCAGTTGATGTACTGATCAGGACTTCAGGGGAAGTCAGATTAAGTGA
CTTTCTTCTTTGGCAGACTTCGTTTTCCATGTTATGTTTCATTGATGCTT
ACTGGCCGGATCTTTCATTGTGGCATTTCATCTATTGCATACTGAAGTTT
CAAATTGGATTTGATTCTCTACAGaATGCTAAAGAACTGAGTGAATTGAA
AGAAAGCAGATCTCAATTGGACAGTGACCTACAGAATGCTTTTATTGAAC
TTAAACAAAATATGAACTCAGATGTTGAAAACCAAGAACTTTTACAAGCT
GTTGCAAAAGAGTATTCTAAAAAGCGAATCGTTCGACAAACTTTATTCTT
AAATCGACTTGAAGAAAAACGTAAAGAACAACTTGTCGAATGGTTCAAAG
GAGAAGCAAGTTGATAATTGGTTCTTGTTGAGGTGAACATATCGCAGAAT
Tatagattttaattttaattataaaataggaatattttcaaattttatta
atttaaaaCACAAATTTCAATCGTAGATatatgattgattgattctcaAC
GAATATACTAGACCTAGCTTGTATTCGGGTATTCTGAAAATAGATACcta
tttatttttaaactttaaaaccatcaaaatacaacaaaaaagaGCTCCTT
TTCCAGTCAACTGGAAAACTATCAACTAtttttgactgaatgaatatttt
ttgaaattgatttttttcatctacattttaaaacttctgtgcaaattttc
tattttttagacATACTGTGTATAACATTTCAATAGGTTTCCATAGCCAA
TAAGA

Run BLAST on NCBI

protein sequence of TCONS_00018383-protein

>TCONS_00018383-protein ID=TCONS_00018383-protein|Name=TCONS_00018383-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MSWFGNFENEQGFFESLCYKVIKMGQMPKHVAVIMDGNRRYAKKENISRK
EGHTAGFDKLAQVLYWCHELDIPEVTCYAFSIENFKRSKQEVDTLINIFN
DKLAQLMKEKDRLMKYGVCIRFVGDISLFDLKIKKSVADVVEMTKSNNKC
FLNIAMAYTSRDEIAQAVREVCKGVKDGLIKESDITESLLESCFYTNHCK
PVDVLIRTSGEVRLSDFLLWQTSFSMLCFIDAYWPDLSLWHFIYCILKFQ
IGFDSLQNAKELSELKESRSQLDSDLQNAFIELKQNMNSDVENQELLQAV
AKEYSKKRIVRQTLFLNRLEEKRKEQLVEWFKGEAS

Run BLAST on NCBI

transcript from alignment at sc0000297:30251..34070-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00018383 ID=TCONS_00018383|Name=TCONS_00018383|organism=Clytia hemisphaerica|type=transcript|length=3820bp|location=Sequence derived from alignment at sc0000297:30251..34070- (Clytia hemisphaerica)
AAAAAGCAGCATAATATTTTCATTTGTTTTGTTATTTCACAATTTAGTAG
ACAATGTCTTGGTTTGGAAATTTTGAAAATGAACAGGGCTTCTTTGAGTC
TCTGTGTTATAAAGTGATTAAAATGGGACAAATGCCAAAACATGTGGCAG
TAATAATGGATGGAAACAGACGCTATGCTAAAAAAGAAAATATATCAAGA
AAAGAAGGACACACAGCTGGTTTTGATAAACTTGCTCAGGTACAATATTA
AATTGTATGAAGGATTTCTGTTTTGATTTCTAACAAACAAATTTCAGAAT
AATTCTGTTTATATATGTTTNTAATTATATGAAGGATTTCTGTTTTGATT
TCTAACAAACAAATTTCAGAATAATTCTGTAAATTATATATGTTTTCGAC
AATAAGAAATACAGATGATCGAAATTTTCCTTTAAAAATCCATAATGACT
TACTTTAGTTTTTTTGTTTAATCTTATAGGTGCTTTATTGGTGTCACGAA
TTAGATATACCAGAAGTTACTTGTTATGCTTTCAGTATCGAAAACTTCAA
GAGAAGCAAACAAGAAGTGGACACCCTTATCAATATTTTTAATGATAAAT
TGGCTCAATTAATGAAAGAAAAGTATATTGAGTTGTTTCTTTACCCAAAC
ATATTTTATTAATTTTGTGAAGTATATGTTTCTATATATGGCAGGGTTTG
TGATTTATGTCACTAAATGAAAAGATAGATCTCTCACTACCATATATCAC
TACAATATATCAGCTAATCCATGTATGATGTTCAATTAATTTTAGGGACC
GTCTGATGAAATATGGAGTTTGTATTCGTTTTGTGGGTGATATATCTTTG
TTTGATTTGAAAATAAAGAAATCTGTTGCAGATGTAGTGGAAATGACAAA
AAGTAACAACAAGTAAACTAATCTTTTTCATTGTTATGATTATGGCAGAA
TTATGAATTTAGTATTGACAACAATTCTGAAATTTGATGTGTTTTGCTGG
TTTTTATTGTGCTGATACAATGACTATTCAAAAAAGATTTTAAAAATTGA
TGTAAAATATCTGATACAGATTGCATTCTTCAATTGCTATTTATTGATTT
TTTCAAGATGCTTTCTGAACATTGCAATGGCCTACACTTCAAGGGATGAA
ATAGCTCAGGCTGTTCGTGAAGTTTGTAAAGGAGTCAAGGATGGGTTAAT
CAAAGAGAGGTATGATCAAATAATTTTAGAGTTATTCAATGCTAAGCAAA
AAAATTCTGAATTTCTAGTTTTGAGACCTCTTTTTATAAATCTTCACTTG
TCAACTATACCCATTACAAGGCTATTAATGTCCCTTATTCATTAGGCCTA
AAGAAATTTTGAATCTTTCAAGTTTGTAGATGGTCATGGAATATTCATGA
TTTTATGAAAAGTTTTCATAGTTTTTTAATTTTCTTCTTCTTTTCAGTGA
TATCACAGAATCCTTGCTTGAATCTTGTTTCTACACCAACCATTGTAAAC
CAGTTGATGTACTGATCAGGACTTCAGGGGAAGTCAGATTAAGTGACTTT
CTTCTTTGGCAGGTAAACAGTTTTGTTTTAATCTTCTTCTTTTAGTAAAA
AAACATATCTATCAGATATCAAACCAGGTCAGAGAGAATTTTATCAATCC
CTCCTATTTCATTAATGGAAAACATTGGTCACTTCAGTATTCCTTGGAAA
TGATGGAAAATTATTCTGTATTCTGTATTTTTGAAGGAAAATTTTGTTCC
CTTTGTATTTGAAAAGGAAATTTTTGGCTTTTCTGTATTTTTGAAGGAAA
ATTTTAACCATTAATATCTCTGAAGGGAAACTTTTTGGCTAATCATATTT
CTGAAGGAAAACTGATTCCTGTATATTTTAAATGGAAATTTTTGGCTTTT
CTTTATTACTCAAGGACAATTTTGTTCCTGCCCTATTTTAAAAGGAAATT
TTAACTTTTCCGTATTTTTGAAGGAAAGCTTTTAACCATTTATATTTTTG
AAGGGAAACTTTGTTCCCACTCTTGACTTTACCGTATTTTTGTAGGAAAA
TTTTTGGCTAATCGTATTTCTGAAGGAAAGTTGTTTCCTGCATATTTTAA
AAGGAAACCTTTGATGTTTCTGTATTTTTGAGGGAAAATTTTTGACTAAT
TATATTTCTGAAGGAATGTTTTAACTTTTCCGTATTTTTTAAGGAAAATT
TTTTGACCATTCATATTTCTGAAGGGAAATTTTGTTCCTTCTGTATTTTA
AAAGGACATTTTTGACTTTTCCGTATTTTTTAAGGAAAATTTTTTGACCA
TTCATATTTCTGAAGGGAAATTTTGTTCCTTCTGTATTTTAAAAGGACAT
TTTTGACTTTTCCGTATTTTTGAAGGAAAATTGTTTCTCAGGTATTTAAA
AAAGAGATTTTTTGACTTTTCTGTATTTTTGAAGGAAAATTCTAAGTAAT
CATTCATATTTCAAGAGGAAAATTTTGTTCCCTCTTTATTTTAAAAGGAA
AATGTTGACTGTTTATTTTTCAGAAAGAAAATTTTGTACTTTTAAAGAAA
AGCTTTGAATATTTCGTAATTTTAAAGGAAAATTAAAAAAAACAATTTTC
ATATCATGTAGGAACAGGTAGGAATAAGGTTAATTTATGTTTTTTGTTTA
TTTTCATTCTAATTTTGAATATTTCTCCATCTACAGACTTCGTTTTCCAT
GTTATGTTTCATTGATGCTTACTGGCCGGATCTTTCATTGTGGCATTTCA
TCTATTGCATACTGAAGTTTCAAATTGGATTTGATTCTCTACAGGTGATT
TTCTATTTTCTTCTGGTGATAATGTTTTTATGGTAAGGCCACCTTTTTAC
AATAGTGCGGCCTTGAATTTATTATAGAAGCTACTTTTTCCTGCTATGGT
GCGCATGGTTGTGGGTTCGATCCCCAGCCGGATCATACCAAAGATTCCCA
AAATGGTACTTGATGCCTCTCTGCTTGATGCTCAGCAACTAAAGTGACGG
ATCAAGGGTGAATGGAGAAATCCAGGGAAAGGAGTGGCGCCCTCCCCTAA
CGTTGGGTAGACAGTTATACAAAAAGGGAGGCTTCGGGTCACCCTCGACT
GCGGTCGCAAAACTTAGTAATACTTAATACTTCTGAACACCAAAGAAGGA
ATTTAAAATTTGAAATTGGGATTTTCTTTTCTTTTGTAGAATGCTAAAGA
ACTGAGTGAATTGAAAGAAAGCAGATCTCAATTGGACAGTGACCTACAGA
ATGCTTTTATTGAACTTAAACAAAATATGAACTCAGATGTTGAAAACCAA
GAACTTTTACAAGCTGTTGCAAAAGAGTATTCTAAAAAGCGAATCGTTCG
ACAAACTTTATTCTTAAATCGACTTGAAGAAAAACGTAAAGAACAACTTG
TCGAATGGTTCAAAGGAGAAGCAAGTTGATAATTGGTTCTTGTTGAGGTG
AACATATCGCAGAATTATAGATTTTAATTTTAATTATAAAATAGGAATAT
TTTCAAATTTTATTAATTTAAAACACAAATTTCAATCGTAGATATATGAT
TGATTGATTCTCAACGAATATACTAGACCTAGCTTGTATTCGGGTATTCT
GAAAATAGATACCTATTTATTTTTAAACTTTAAAACCATCAAAATACAAC
AAAAAAGAGCTCCTTTTCCAGTCAACTGGAAAACTATCAACTATTTTTGA
CTGAATGAATATTTTTTGAAATTGATTTTTTTCATCTACATTTTAAAACT
TCTGTGCAAATTTTCTATTTTTTAGACATACTGTGTATAACATTTCAATA
GGTTTCCATAGCCAATAAGA

Coding sequence (CDS) from alignment at sc0000297:30251..34070-

>TCONS_00018383 ID=TCONS_00018383|Name=TCONS_00018383|organism=Clytia hemisphaerica|type=CDS|length=7077bp|location=Sequence derived from alignment at sc0000297:30251..34070- (Clytia hemisphaerica)
AATGCTAAAGAACTGAGTGAATTGAAAGAAAGCAGATCTCAATTGGACAG
TGACCTACAGAATGCTTTTATTGAACTTAAACAAAATATGAACTCAGATG
TTGAAAACCAAGAACTTTTACAAGCTGTTGCAAAAGAGTATTCTAAAAAG
CGAATCGTTCGACAAACTTTATTCTTAAATCGACTTGAAGAAAAACGTAA
AGAACAACTTGTCGAATGGTTCAAAGGAGAAGCAAGTTGAACTTCGTTTT
CCATGTTATGTTTCATTGATGCTTACTGGCCGGATCTTTCATTGTGGCAT
TTCATCTATTGCATACTGAAGTTTCAAATTGGATTTGATTCTCTACAGTG
ATATCACAGAATCCTTGCTTGAATCTTGTTTCTACACCAACCATTGTAAA
CCAGTTGATGTACTGATCAGGACTTCAGGGGAAGTCAGATTAAGTGACTT
TCTTCTTTGGCAGATGCTTTCTGAACATTGCAATGGCCTACACTTCAAGG
GATGAAATAGCTCAGGCTGTTCGTGAAGTTTGTAAAGGAGTCAAGGATGG
GTTAATCAAAGAGAGGGACCGTCTGATGAAATATGGAGTTTGTATTCGTT
TTGTGGGTGATATATCTTTGTTTGATTTGAAAATAAAGAAATCTGTTGCA
GATGTAGTGGAAATGACAAAAAGTAACAACAAGTGCTTTATTGGTGTCAC
GAATTAGATATACCAGAAGTTACTTGTTATGCTTTCAGTATCGAAAACTT
CAAGAGAAGCAAACAAGAAGTGGACACCCTTATCAATATTTTTAATGATA
AATTGGCTCAATTAATGAAAGAAAAATGTCTTGGTTTGGAAATTTTGAAA
ATGAACAGGGCTTCTTTGAGTCTCTGTGTTATAAAGTGATTAAAATGGGA
CAAATGCCAAAACATGTGGCAGTAATAATGGATGGAAACAGACGCTATGC
TAAAAAAGAAAATATATCAAGAAAAGAAGGACACACAGCTGGTTTTGATA
AACTTGCTCAGAATGCTAAAGAACTGAGTGAATTGAAAGAAAGCAGATCT
CAATTGGACAGTGACCTACAGAATGCTTTTATTGAACTTAAACAAAATAT
GAACTCAGATGTTGAAAACCAAGAACTTTTACAAGCTGTTGCAAAAGAGT
ATTCTAAAAAGCGAATCGTTCGACAAACTTTATTCTTAAATCGACTTGAA
GAAAAACGTAAAGAACAACTTGTCGAATGGTTCAAAGGAGAAGCAAGTTG
AACTTCGTTTTCCATGTTATGTTTCATTGATGCTTACTGGCCGGATCTTT
CATTGTGGCATTTCATCTATTGCATACTGAAGTTTCAAATTGGATTTGAT
TCTCTACAGTGATATCACAGAATCCTTGCTTGAATCTTGTTTCTACACCA
ACCATTGTAAACCAGTTGATGTACTGATCAGGACTTCAGGGGAAGTCAGA
TTAAGTGACTTTCTTCTTTGGCAGATGCTTTCTGAACATTGCAATGGCCT
ACACTTCAAGGGATGAAATAGCTCAGGCTGTTCGTGAAGTTTGTAAAGGA
GTCAAGGATGGGTTAATCAAAGAGAGGGACCGTCTGATGAAATATGGAGT
TTGTATTCGTTTTGTGGGTGATATATCTTTGTTTGATTTGAAAATAAAGA
AATCTGTTGCAGATGTAGTGGAAATGACAAAAAGTAACAACAAGTGCTTT
ATTGGTGTCACGAATTAGATATACCAGAAGTTACTTGTTATGCTTTCAGT
ATCGAAAACTTCAAGAGAAGCAAACAAGAAGTGGACACCCTTATCAATAT
TTTTAATGATAAATTGGCTCAATTAATGAAAGAAAAATGTCTTGGTTTGG
AAATTTTGAAAATGAACAGGGCTTCTTTGAGTCTCTGTGTTATAAAGTGA
TTAAAATGGGACAAATGCCAAAACATGTGGCAGTAATAATGGATGGAAAC
AGACGCTATGCTAAAAAAGAAAATATATCAAGAAAAGAAGGACACACAGC
TGGTTTTGATAAACTTGCTCAGAATGCTAAAGAACTGAGTGAATTGAAAG
AAAGCAGATCTCAATTGGACAGTGACCTACAGAATGCTTTTATTGAACTT
AAACAAAATATGAACTCAGATGTTGAAAACCAAGAACTTTTACAAGCTGT
TGCAAAAGAGTATTCTAAAAAGCGAATCGTTCGACAAACTTTATTCTTAA
ATCGACTTGAAGAAAAACGTAAAGAACAACTTGTCGAATGGTTCAAAGGA
GAAGCAAGTTGAACTTCGTTTTCCATGTTATGTTTCATTGATGCTTACTG
GCCGGATCTTTCATTGTGGCATTTCATCTATTGCATACTGAAGTTTCAAA
TTGGATTTGATTCTCTACAGTGATATCACAGAATCCTTGCTTGAATCTTG
TTTCTACACCAACCATTGTAAACCAGTTGATGTACTGATCAGGACTTCAG
GGGAAGTCAGATTAAGTGACTTTCTTCTTTGGCAGATGCTTTCTGAACAT
TGCAATGGCCTACACTTCAAGGGATGAAATAGCTCAGGCTGTTCGTGAAG
TTTGTAAAGGAGTCAAGGATGGGTTAATCAAAGAGAGGGACCGTCTGATG
AAATATGGAGTTTGTATTCGTTTTGTGGGTGATATATCTTTGTTTGATTT
GAAAATAAAGAAATCTGTTGCAGATGTAGTGGAAATGACAAAAAGTAACA
ACAAGTGCTTTATTGGTGTCACGAATTAGATATACCAGAAGTTACTTGTT
ATGCTTTCAGTATCGAAAACTTCAAGAGAAGCAAACAAGAAGTGGACACC
CTTATCAATATTTTTAATGATAAATTGGCTCAATTAATGAAAGAAAAATG
TCTTGGTTTGGAAATTTTGAAAATGAACAGGGCTTCTTTGAGTCTCTGTG
TTATAAAGTGATTAAAATGGGACAAATGCCAAAACATGTGGCAGTAATAA
TGGATGGAAACAGACGCTATGCTAAAAAAGAAAATATATCAAGAAAAGAA
GGACACACAGCTGGTTTTGATAAACTTGCTCAGAATGCTAAAGAACTGAG
TGAATTGAAAGAAAGCAGATCTCAATTGGACAGTGACCTACAGAATGCTT
TTATTGAACTTAAACAAAATATGAACTCAGATGTTGAAAACCAAGAACTT
TTACAAGCTGTTGCAAAAGAGTATTCTAAAAAGCGAATCGTTCGACAAAC
TTTATTCTTAAATCGACTTGAAGAAAAACGTAAAGAACAACTTGTCGAAT
GGTTCAAAGGAGAAGCAAGTTGAACTTCGTTTTCCATGTTATGTTTCATT
GATGCTTACTGGCCGGATCTTTCATTGTGGCATTTCATCTATTGCATACT
GAAGTTTCAAATTGGATTTGATTCTCTACAGTGATATCACAGAATCCTTG
CTTGAATCTTGTTTCTACACCAACCATTGTAAACCAGTTGATGTACTGAT
CAGGACTTCAGGGGAAGTCAGATTAAGTGACTTTCTTCTTTGGCAGATGC
TTTCTGAACATTGCAATGGCCTACACTTCAAGGGATGAAATAGCTCAGGC
TGTTCGTGAAGTTTGTAAAGGAGTCAAGGATGGGTTAATCAAAGAGAGGG
ACCGTCTGATGAAATATGGAGTTTGTATTCGTTTTGTGGGTGATATATCT
TTGTTTGATTTGAAAATAAAGAAATCTGTTGCAGATGTAGTGGAAATGAC
AAAAAGTAACAACAAGTGCTTTATTGGTGTCACGAATTAGATATACCAGA
AGTTACTTGTTATGCTTTCAGTATCGAAAACTTCAAGAGAAGCAAACAAG
AAGTGGACACCCTTATCAATATTTTTAATGATAAATTGGCTCAATTAATG
AAAGAAAAATGTCTTGGTTTGGAAATTTTGAAAATGAACAGGGCTTCTTT
GAGTCTCTGTGTTATAAAGTGATTAAAATGGGACAAATGCCAAAACATGT
GGCAGTAATAATGGATGGAAACAGACGCTATGCTAAAAAAGAAAATATAT
CAAGAAAAGAAGGACACACAGCTGGTTTTGATAAACTTGCTCAGAATGCT
AAAGAACTGAGTGAATTGAAAGAAAGCAGATCTCAATTGGACAGTGACCT
ACAGAATGCTTTTATTGAACTTAAACAAAATATGAACTCAGATGTTGAAA
ACCAAGAACTTTTACAAGCTGTTGCAAAAGAGTATTCTAAAAAGCGAATC
GTTCGACAAACTTTATTCTTAAATCGACTTGAAGAAAAACGTAAAGAACA
ACTTGTCGAATGGTTCAAAGGAGAAGCAAGTTGAACTTCGTTTTCCATGT
TATGTTTCATTGATGCTTACTGGCCGGATCTTTCATTGTGGCATTTCATC
TATTGCATACTGAAGTTTCAAATTGGATTTGATTCTCTACAGTGATATCA
CAGAATCCTTGCTTGAATCTTGTTTCTACACCAACCATTGTAAACCAGTT
GATGTACTGATCAGGACTTCAGGGGAAGTCAGATTAAGTGACTTTCTTCT
TTGGCAGATGCTTTCTGAACATTGCAATGGCCTACACTTCAAGGGATGAA
ATAGCTCAGGCTGTTCGTGAAGTTTGTAAAGGAGTCAAGGATGGGTTAAT
CAAAGAGAGGGACCGTCTGATGAAATATGGAGTTTGTATTCGTTTTGTGG
GTGATATATCTTTGTTTGATTTGAAAATAAAGAAATCTGTTGCAGATGTA
GTGGAAATGACAAAAAGTAACAACAAGTGCTTTATTGGTGTCACGAATTA
GATATACCAGAAGTTACTTGTTATGCTTTCAGTATCGAAAACTTCAAGAG
AAGCAAACAAGAAGTGGACACCCTTATCAATATTTTTAATGATAAATTGG
CTCAATTAATGAAAGAAAAATGTCTTGGTTTGGAAATTTTGAAAATGAAC
AGGGCTTCTTTGAGTCTCTGTGTTATAAAGTGATTAAAATGGGACAAATG
CCAAAACATGTGGCAGTAATAATGGATGGAAACAGACGCTATGCTAAAAA
AGAAAATATATCAAGAAAAGAAGGACACACAGCTGGTTTTGATAAACTTG
CTCAGAATGCTAAAGAACTGAGTGAATTGAAAGAAAGCAGATCTCAATTG
GACAGTGACCTACAGAATGCTTTTATTGAACTTAAACAAAATATGAACTC
AGATGTTGAAAACCAAGAACTTTTACAAGCTGTTGCAAAAGAGTATTCTA
AAAAGCGAATCGTTCGACAAACTTTATTCTTAAATCGACTTGAAGAAAAA
CGTAAAGAACAACTTGTCGAATGGTTCAAAGGAGAAGCAAGTTGAACTTC
GTTTTCCATGTTATGTTTCATTGATGCTTACTGGCCGGATCTTTCATTGT
GGCATTTCATCTATTGCATACTGAAGTTTCAAATTGGATTTGATTCTCTA
CAGTGATATCACAGAATCCTTGCTTGAATCTTGTTTCTACACCAACCATT
GTAAACCAGTTGATGTACTGATCAGGACTTCAGGGGAAGTCAGATTAAGT
GACTTTCTTCTTTGGCAGATGCTTTCTGAACATTGCAATGGCCTACACTT
CAAGGGATGAAATAGCTCAGGCTGTTCGTGAAGTTTGTAAAGGAGTCAAG
GATGGGTTAATCAAAGAGAGGGACCGTCTGATGAAATATGGAGTTTGTAT
TCGTTTTGTGGGTGATATATCTTTGTTTGATTTGAAAATAAAGAAATCTG
TTGCAGATGTAGTGGAAATGACAAAAAGTAACAACAAGTGCTTTATTGGT
GTCACGAATTAGATATACCAGAAGTTACTTGTTATGCTTTCAGTATCGAA
AACTTCAAGAGAAGCAAACAAGAAGTGGACACCCTTATCAATATTTTTAA
TGATAAATTGGCTCAATTAATGAAAGAAAAATGTCTTGGTTTGGAAATTT
TGAAAATGAACAGGGCTTCTTTGAGTCTCTGTGTTATAAAGTGATTAAAA
TGGGACAAATGCCAAAACATGTGGCAGTAATAATGGATGGAAACAGACGC
TATGCTAAAAAAGAAAATATATCAAGAAAAGAAGGACACACAGCTGGTTT
TGATAAACTTGCTCAGAATGCTAAAGAACTGAGTGAATTGAAAGAAAGCA
GATCTCAATTGGACAGTGACCTACAGAATGCTTTTATTGAACTTAAACAA
AATATGAACTCAGATGTTGAAAACCAAGAACTTTTACAAGCTGTTGCAAA
AGAGTATTCTAAAAAGCGAATCGTTCGACAAACTTTATTCTTAAATCGAC
TTGAAGAAAAACGTAAAGAACAACTTGTCGAATGGTTCAAAGGAGAAGCA
AGTTGAACTTCGTTTTCCATGTTATGTTTCATTGATGCTTACTGGCCGGA
TCTTTCATTGTGGCATTTCATCTATTGCATACTGAAGTTTCAAATTGGAT
TTGATTCTCTACAGTGATATCACAGAATCCTTGCTTGAATCTTGTTTCTA
CACCAACCATTGTAAACCAGTTGATGTACTGATCAGGACTTCAGGGGAAG
TCAGATTAAGTGACTTTCTTCTTTGGCAGATGCTTTCTGAACATTGCAAT
GGCCTACACTTCAAGGGATGAAATAGCTCAGGCTGTTCGTGAAGTTTGTA
AAGGAGTCAAGGATGGGTTAATCAAAGAGAGGGACCGTCTGATGAAATAT
GGAGTTTGTATTCGTTTTGTGGGTGATATATCTTTGTTTGATTTGAAAAT
AAAGAAATCTGTTGCAGATGTAGTGGAAATGACAAAAAGTAACAACAAGT
GCTTTATTGGTGTCACGAATTAGATATACCAGAAGTTACTTGTTATGCTT
TCAGTATCGAAAACTTCAAGAGAAGCAAACAAGAAGTGGACACCCTTATC
AATATTTTTAATGATAAATTGGCTCAATTAATGAAAGAAAAATGTCTTGG
TTTGGAAATTTTGAAAATGAACAGGGCTTCTTTGAGTCTCTGTGTTATAA
AGTGATTAAAATGGGACAAATGCCAAAACATGTGGCAGTAATAATGGATG
GAAACAGACGCTATGCTAAAAAAGAAAATATATCAAGAAAAGAAGGACAC
ACAGCTGGTTTTGATAAACTTGCTCAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_010309	XLOC_010309	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00018383-protein	TCONS_00018383-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000297	supercontig	sc0000297:30251..34070 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.8744	17.1871	3.99763	2.27094	23.4227	16.3546	18.5963	18.3007	13.6765	10.5507	7.03874	10.1452	7.25276	7.15841	8.47208	8.93568	13.1241	11.5458	5.14552	5.82784	12.4434	12.2463	21.1879	19.7674	20.6657	16.6429	5.89543	4.29173	9.92339	9.75618

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001441	UPP_synth-like
IPR018520	UPP_synth-like_CS

Vocabulary: **Molecular Function**
Term	Definition
GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

Blast

[Close]

BLAST of TCONS_00018383 vs. Swiss-Prot (Human)
Match: DHDDS (Dehydrodolichyl diphosphate synthase complex subunit DHDDS OS=Homo sapiens GN=DHDDS PE=1 SV=3)

HSP 1 Score: 306.99 bits (785), Expect = 7.430e-100
Identity = 154/312 (49.36%), Postives = 204/312 (65.38%), Query Frame = 3

Query:  102 LCYKVIKMGQMPKHVAVIMDGNRRYAKKENISRKEGHTAGFDKLAQVLYWCHELDIPEVTCYAFSIENFKRSKQEVDTLINIFNDKLAQLMKEKDRLMKYGVCIRFVGDISLFDLKIKKSVADVVEMTKSNNKCFLNIAMAYTSRDEIAQAVREVCKGVKDGLIKESDITESLLESCFYTNHCKPVDVLIRTSGEVRLSDFLLWQTSFSMLCFIDAYWPDLSLWHFIYCILKFQIGFDSLQNAKELSELKESRSQLDSDLQNAFIELKQNMNSDVENQELLQAVAKEYSKKRIVRQTLFLNRLEEKRKEQLV 1037
             C  +IK G MPKH+A IMDGNRRYAKK  + R+EGH+ GF+KLA+ L WC  L I EVT YAFSIENFKRSK EVD L+++   K ++LM+EK++L K+GVCIR +GD+ L  L +++ +A  V+ TK+ NKCFLN+  AYTSR EI+ AVRE+  GV+ GL+  SDI+ESLL+ C YTN     D+LIRTSGEVRLSDFLLWQTS S L F    WP+ + W+    IL+FQ+    LQ A+++   +  R QL+ D      +L +       + +L +    + S +R  R   FL  LE KR + L 
Sbjct:   15 FCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKRADWLA 326

The following BLAST results are available for this feature:

BLAST of TCONS_00018383 vs. Swiss-Prot (Human)

BLAST of TCONS_00018383 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DHDDS	7.430e-100	49.36	Dehydrodolichyl diphosphate synthase complex subun...	[more]

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TCONS_00018383 (transcript) - C. hemisphaerica