TCONS_00018383-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018383-protein
Unique NameTCONS_00018383-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length336

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018383-protein ID=TCONS_00018383-protein|Name=TCONS_00018383-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
MSWFGNFENEQGFFESLCYKVIKMGQMPKHVAVIMDGNRRYAKKENISRK
EGHTAGFDKLAQVLYWCHELDIPEVTCYAFSIENFKRSKQEVDTLINIFN
DKLAQLMKEKDRLMKYGVCIRFVGDISLFDLKIKKSVADVVEMTKSNNKC
FLNIAMAYTSRDEIAQAVREVCKGVKDGLIKESDITESLLESCFYTNHCK
PVDVLIRTSGEVRLSDFLLWQTSFSMLCFIDAYWPDLSLWHFIYCILKFQ
IGFDSLQNAKELSELKESRSQLDSDLQNAFIELKQNMNSDVENQELLQAV
AKEYSKKRIVRQTLFLNRLEEKRKEQLVEWFKGEAS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010309XLOC_010309Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018383TCONS_00018383Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001441UPP_synth-like
IPR018520UPP_synth-like_CS
Vocabulary: Molecular Function
TermDefinition
GO:0016765transferase activity, transferring alkyl or aryl (other than methyl) groups
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001441Decaprenyl diphosphate synthase-likeTIGRFAMTIGR00055TIGR00055coord: 27..251
e-value: 6.1E-81
score: 269.1
IPR001441Decaprenyl diphosphate synthase-likePFAMPF01255Prenyltransfcoord: 34..250
e-value: 2.1E-76
score: 256.2
IPR001441Decaprenyl diphosphate synthase-likeGENE3D3.40.1180.10coord: 14..260
e-value: 7.0E-91
score: 303.1
IPR001441Decaprenyl diphosphate synthase-likeHAMAPMF_01139ISPTcoord: 27..258
score: 30.045
IPR001441Decaprenyl diphosphate synthase-likeCDDcd00475Cis_IPPScoord: 30..250
e-value: 1.12274E-112
score: 328.178
IPR001441Decaprenyl diphosphate synthase-likeSUPERFAMILY64005Undecaprenyl diphosphate synthasecoord: 24..250
IPR018520Di-trans-poly-cis-decaprenylcistransferase-like, conserved sitePROSITEPS01066UPP_SYNTHASEcoord: 203..220

Blast
[Close]
BLAST of TCONS_00018383-protein vs. Swiss-Prot (Human)
Match: DHDDS (Dehydrodolichyl diphosphate synthase complex subunit DHDDS OS=Homo sapiens GN=DHDDS PE=1 SV=3)

HSP 1 Score: 313.153 bits (801), Expect = 5.201e-106
Identity = 160/328 (48.78%), Postives = 211/328 (64.33%), Query Frame = 0 
Query:    1 MSWFGNFENEQGFFESLCYKVIKMGQMPKHVAVIMDGNRRYAKKENISRKEGHTAGFDKLAQVLYWCHELDIPEVTCYAFSIENFKRSKQEVDTLINIFNDKLAQLMKEKDRLMKYGVCIRFVGDISLFDLKIKKSVADVVEMTKSNNKCFLNIAMAYTSRDEIAQAVREVCKGVKDGLIKESDITESLLESCFYTNHCKPVDVLIRTSGEVRLSDFLLWQTSFSMLCFIDAYWPDLSLWHFIYCILKFQIGFDSLQNAKELSELKESRSQLDSDLQNAFIELKQNMNSDVENQELLQAVAKEYSKKRIVRQTLFLNRLEEKRKEQLV 328
            MSW    E E   +E  C  +IK G MPKH+A IMDGNRRYAKK  + R+EGH+ GF+KLA+ L WC  L I EVT YAFSIENFKRSK EVD L+++   K ++LM+EK++L K+GVCIR +GD+ L  L +++ +A  V+ TK+ NKCFLN+  AYTSR EI+ AVRE+  GV+ GL+  SDI+ESLL+ C YTN     D+LIRTSGEVRLSDFLLWQTS S L F    WP+ + W+    IL+FQ+    LQ A+++   +  R QL+ D      +L +       + +L +    + S +R  R   FL  LE KR + L 
Sbjct:    1 MSWIK--EGELSLWERFCANIIKAGPMPKHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRSKSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDISESLLDKCLYTNRSPHPDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQFQMNHSVLQKARDMYAEERKRQQLERDQATVTEQLLREGLQASGDAQLRRTRLHKLSARREERVQGFLQALELKRADWLA 326
The following BLAST results are available for this feature:
BLAST of TCONS_00018383-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHDDS5.201e-10648.78Dehydrodolichyl diphosphate synthase complex subun... [more]
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