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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018291 ID=TCONS_00018291|Name=TCONS_00018291|organism=Clytia hemisphaerica|type=transcript|length=1596bp
tttttttgactttgttaaagaggttttatgGTAAATAAAATGGAGCAGTT
ATTGAATAACAAAAGTATGAGGGAACTAACACCAGAAGAGAAGTGGAGGC
AGGACCATGAAAAGCTACACGCTAAGCACAGAGGTCACGAAGCAATGCAT
TTGGAAATGGTGCTCATTCTTTTTGCCACTTTATTTGTGATGCAAATAGT
GCTGTTTAAATGGCAACAAATGCACAGCAGATCGTACAAGatGGTGACGT
TGATAGGGATGTGGGTCTTCCCTTTCATCTTCACAGTAAGGCATGGATGG
TATCGGATGATATCTGTATGGTCGATCTTCACAATCATCACACTCTTTGT
CATATGGAAAGCCACCAGGTTTCCTGTAAACCCAACAACCCCAAGGCTCG
TATACAAATGGTTTTACAACGTGCATCGTGTAACATATGCTTTAGGAATC
ATCGGTTACCTAATTATCATGATGACTTTCATGGGGTTCAACGTGTTGCT
GCTCATCAAGCCTGAATTCTCAATGCAAGCTGGTGTCATTATCATATTTT
ATGGACTTTATTATGGTGTGCTAGGTAGAGATTGTGCTGAGTTGTGTGCA
GATAAAATGGCTGCTAAAATGGGGTACTACAGTGAGACTGGTCTACCTTC
CAAGCGTCTGATGCCAAACATCTGTGCAGTGTGTGGTCAGGAGTTGACGC
TGACAGCTATGGAAGATATGGAAGAGGATGATACTGAGAAAAGTTATAAA
TTATCTTGTGGTCATTTattCCACGAGTTTTGTATACGTGGTTGGTGCAT
CGTCGGGAAGAAACAGACCTGTCCGTATTGTAAAGAAAAAGTCGATCTTA
AAAGAATGTTCAAGAATCCATGGGAACGACCTCACATTTTATTTGGACAA
CTGTTGGATTGGTTGCGTTATTTCATCGTATGGCTTCCAGTCATCATTCT
CGTAACACGTGGTATTAATTACGAACTGGGGCTAGAATGAAATTGTACGG
TCAAacccaaatttcaaaaaggctCAAAAATTCGATTTAGTCTCCCAACG
GATGAGATTTGTTCTTAACTGGAACGTTATAATACTGAAATCAAACAAAT
TTCTGACAATGAATTGGTAGAAAAAACTTTTCCGTTTGTTGCACGCACAA
GTTCATCATTGCCAACAAAGTAATGTCTGTCATACAATAAAAGATGTACC
AATATGGTGAATTAGGGTTACAAGATTTTATACACAGAAAGATGACATGG
AACAAAACAATTTTACTTCACATCCTAGCAATAGGGATCTTGTCGCTaca
atttttacctttttaacaTCCATGTTTCATTATCCCTAGAAAAACGATAG
GGCGACACTTCTGTAGACTGAATTTCTGGTATTGCATCTGAGATTTGGAG
GTTTATTGtatattttgaaagtttatttttaatGTTCAATCTCTGAAGGG
GCTTCACAGGGTCAAACTACTCAGCAAACATTGaggtttttcaaattcag
tggaTTTGATCGAAACGGATGAAACGTGGGTGTTCTTATTTTAGATAGGG
TCTAAATTAGGAATTGAATAATTagttattttgaataattttcgaA Run BLAST on NCBI transcript from alignment at sc0000295:133928..148625- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018291 ID=TCONS_00018291|Name=TCONS_00018291|organism=Clytia hemisphaerica|type=transcript|length=14698bp|location=Sequence derived from alignment at sc0000295:133928..148625- (Clytia hemisphaerica)
TTTTTTTGACTTTGTTAAAGAGGTTTTATGGTAAGTAATTATATGTGTTT
CTGTCTGGGTTTCCAAAGTTTTGAGATTCAAAACAAACTGAACCAGACTT
TTTTAGTCTTGCTTTAAAAATACATTTGACATTTGCCTTTGGTTGTGATT
ATGAAATGGTGAAAGTTTGATTGAGTTTGCTTTGAGTTATCAAAACAAAT
TTGTTGTCAAAGAGATTTAACAATAAGTGAAAATACAGGCCAGATATCAA
CAGTCCCGTGTTTCTCGACCAATCGTCCCCAAGCCAAGTTAGAGCAGATA
CATAATTTGAAGAAGTAATTAACCAGACAGTCTGGGAAATCCTCTCAATT
GCACGCTTATCAAAGCGCGCCGTAAGCTCGCAATTGCACGCTTTATCAAA
ATGGCAGAATTTTTATAAACGCTTATCGAAATTGTTCTGAAACGGGCGGT
AAGCGTTAAGAAAGCTTGCTAGGTGACGGCTTTTGCGGTAAGCGTGCAAT
TGCACGCTTTAAAATTTCCTATATTTTTGACACGCAATTCCTTCCGAAAG
CTCTGTTGAATTTCAAAAGCCTAGGGCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCTGTTGAATTTCAAAAGCCTAGGGCAGTTTTACTCAAAA
TTTATCGTAGAAGAAGATTCCGTAAAAATGGATCGCCCGTTAAACCATGC
CTTCGCCCGAATTAGAGAATTCTGAACCCCTTGAAATCCCTAAGCAATTT
CAACCGGGGCGGGAGCGGGCGTAAATTATAACCGTGCAATTGCGCGCTTA
CGCCCTCGGAAGATAAGCGTGCAATTGAGAGGATTTCCCAGACTGCCAGA
CGTAATTTAATCAAACCAATCGAACGGTTTTTTTTTATCAAACTTTGTCG
AACTTAATCGAACTTTGTTGGCCGATTAATGTTTGACTAAGTTCGGTTGT
CGAACTTTAATCAAATACCGTGAGTGGTCCTAAATCCGACAGCCCTGCCT
AAATCCGACCCCCCAAATAACTGCTATGAAAAAAAATTCTATGTTTACAA
ACATTCCCTCTCCAAGTTAAGCAATAAACTATATTGCAAGAATTCTCAAA
ACAAAACATCTAACAAGATGACTGAAATGTCAAGACTTCCAAGATGTCAA
TTAATATGATAAAAAAGTGTGAGTTGTAAAAATAATTACCTCTATTATTC
TGAATTTGTTGCTTGTGTTTAAAACGTTAACAATTTAGTAATAAAAAAAA
TTATGTTTTGTATAAGAAGCAATTAATGTTTTGGTTCAATTGGTTCAGTG
CATCAAATCTCTCAGTTTAGTTGAAACTTTGGTATCTTCATTGCGTCACA
ACGAAATGCTTGTTTTTATTTTAGTTTGTATCTTTGAAAGACCCCATCGG
ATTTAGGCAGGGCTGTCGGATTTAGGACCACTCACGGTATATAATCAGGC
GAGGGGAATTTGATGTTCTGTTTACCGTCGACCGCCCGCATGCTCTTGAT
ACTTGAGCCGTCGCTCAAAAAAGTTCATTATTTCTTAAAAACTCATTATT
TTCTTCTTTTCCTGTGTCAAGCTATCCAAAACTACGGTGACCCAGAAGGC
TCATTATTGCTGCGCGTGAGAACATGAACTGTGCGCGAGAAATATGCTGT
GCGCATGAGAAGTATATTATGTGCGCGAGAAGTATGTTGTGCGCGCACAA
GTTGGAAATTGTGTGCAAGAAAAAAAATACTGTGCGCGCAAGAACAAAAA
TTAAAGTAGATGTTTGATAATATTAATTCCGCCCTTTCCGCCCTCCCTCC
TGTAATTTGAGTCTGGAATTTATGATTCAAGTCTGTAGAATACATATGCC
CTCAAAACACATGTTTTTTGACCGATTTCAGCTTAACAAGATTCCTATTC
CTTGGACCACAGCAACCAGCAGAATGACCACAAAACCGTAACAACTTTTA
ACATTTAGCGCGACCTTGTCTATCATTTTGGATATGATATTTTATCTTTG
TATGCATTTTGAGGACCCGAATGAAATTACCAGCGACACGATTTCGGGAC
CGAATCATTATTTTTGGAAGTTAAACTATATCTTCTTTGCGAATATATGT
CTCCTTTGCTTTCGCACTAGACTATATTCTCTCGCGCACGATAACATCTT
CTCGCGCACACAACATACATTTCGCACGCACAACATACATTTCGCACGCA
CAACATATTTCTCGCTCGCACAACATATTTCTCGCTTGCACAACATATTT
CTCGCTCGCACAACATATTTCTCGCTCACACAACATATTTCTCGCTAGCA
CAACATATTTGTCCCTTGCACAACATAATTCTCGCTCGCACAGCATATTT
CTCGCGCGCACAGCATATTTCTCGCGCGCAGCAATAATGAGCCTTCTGGG
CCATCGTACAAAACACTCAAAGTGAATCAAAAATAACATCTTCGCTAACA
AAATGTGCGCCTTGAGTAAAAAACATGGATCCAATCACGTCCGCGAATGG
GGAAGGCATTTTTTTAAGCAGTGGGCGGCTACAAGGAAATTTGCGTTTTA
GACGCGTCTCGAACGCGTTGGAATTTTCGCACATGTCATTTTGATTCCGA
AAGCAGGAGGGGTCGGTACTAAGTTGTGGAGGCCAGTGCCGGGTGGTGGT
CTCATAAGGTAAGTAAAAAACAACTTAGTACATGGTACTAAGTGGTGGTC
CTAATTGAAAAAAACATTTTTGCAACTTTGTATCAAGGGACTAAATGGGG
GTCTCAATGCCAAATATGAGGCATCAATTTAGTATCTGGTATATACTCAC
TTATATTGACTTATCCAATTTTTAAGAATGTATTTTTTTATGTGGGTCAA
TTGTTGAATCTGTTTATTTCAGTAATTTTCATTTGGCTATAATTCGGTTT
GCACTGATAGCTAGAGTACATACCCTTTGAATAACTGAAAAACAGTTATT
TATCAACTTTGCTTGATTTTAAAGTTTATGTTGATGATGTTTCAAATTAA
AGATTAATTAAAGTCTGTCCAGATATAATTGGCAGTGGAAACAAGAATGC
CTCTAACTTTTGATAGTCAAATATAATTATGGAATTTTTATTTGCTTGTT
TCAGAGAATCAAAAGCGCTATATTTGAATGTATTTTTGGTTGAAAAATTC
GCAATTTTTAGCGGTTAAATTTGCGATTGTAAAAATTGAGCTTTTTTTCT
ACTAATGCTATAAGGTTCATTTTTACACCAGTGGTAGTTCAGCCTTAGGT
TAAGATTTTTTTTAAATTTCAAGGCGAACAGAAAAGTCCTTCGGAAGATA
TGGGACNGGTTCATTTTTACACCAGTGGTAGTTCAGCCTTAGGTTAAGAA
TTTTTTTAAATTTCAAGGCGAACAGAAAAGTCCTTCGGAAGATATGGGAC
CCGAAATACCCCTTGGTAACACTTTTCTGTGAAATATCGTATCTCCAACT
TGTTACTAAAAACGGAGGTTATGTTATCTTTTTTGAACAGTGCAATTAAA
AGTTGGAAAGTGTTGGTGCATTGGTATTATTGGTATCATTGATTATTTCG
AAACTAAGTGAAATCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTTTTGTTCGCCTTGAAATTTAACAAA
CTTCTAAACCTAAGGTTGAACTACCACTGGTGTAAAAATGAACGTTATAG
CATAGGTAGAAAAAAAGCTTAATTTTTGCAATCTTAAATTTAACCGCTAA
AAATCGCGAATTTTTCAACCAAAAATACATTCAAATATAGCGCTTTTGAT
TTTCTGAAACAAGCAAAAAAAATTTCCATAATTATATTTGACTATCAAAA
GTTACAGGCATTCTTGTTTCCACTGCCAATTATATCTGGACAGACTTTAA
TTAATTAGTTAATTAGAGCTAAATTTGTTTTTATTTGAAATTTTATTTCT
TTTGATTTAAAAAAATTGGCTTGAAAATTATAATTTGGCTTGGCCTAACT
TGACAGGAATTTTTACTGAGATATTGTCATTGAGAGTGGTACAGACAGAG
TCGTGCTGAGTGGTGTGGTACAGAGTGGTTTTGTAAAGTTTTTTAGAAAA
TTTAAAGGAGGTGACCAGAAAGTACCATTACGAAGAAAATAGGTATACCA
CATTTTGAGGGGGAAAATCAACTTAGTACAGGGTACTTAAGGGTGGTGTG
TCATTTCTCAATGTTGATATCAAGATTGTACCGGGTACTAAGGGGTGGTA
TACCTATTTTAAGGTACCCAAAGGAGGTCATTTTTCGCAATTTTTGCCGG
CTTTTGACAACACTTAGAGGTACTTTGAAGGACCCAACGGTGCAGACGTG
TACCCTCACATCCCCTGACCAGTAGACACCAATCAGACCCCCGGGACCCC
CAGGGGCCGTCCACGGTAGTACCTAAAGGAGGTCATTTTTTGTTGTCAAA
CTTTTTCGAATGAGTTTTTTGTCGAATTTGTCGAACCTTTCTTGTTGTCG
AACTTTATCGAACGGAGTTTTTTGTCGAATTTGTCAAACATTTCTCGTTG
TCGAACTTTGTTGAACTTAATATATTTTATCAAATAATACTCACAATTTT
AGCGACTTTTGTCGTTCGATTAAGTTCGACAAAGTTCGATTAGTTCGGTA
ATCGAGCTGTTCGATTTAGTCCGGCGGCGATCCAGGATTACCCTTACAAT
TAGTAAATATGGGTTTTTATTTTATTTTCCCATCATATGGTCCCTTGGGA
CCCCAAAACCAGTTTTTGCCAAGCTGGCAAAGTCGGGGAAAATTTTTTAT
GGGGGCTTGAAGGGGGTAGGGTCATTTTAGCCTGGGGGTCCTTAGAAAGT
CGATTTTTGAAGTTCTCATTTAGCTAAACTGATTATGCCATCAGATAGAG
CTTGAAGAGCAGATCTCCAAAATGGGGTCATTTGTCTCATTTGGCGGACT
TAGTCCCCCGGAATTGGCTGATACGTCTTCGAAAATGCAATATTTTATGC
TGACGTCAGCATTTTTGAGAGAATTTCCAGTGAAAGATACCCCTTTTAAC
AGATGCGTCTTGAAGATTACTATCGATTAGAGGGGTCATTTATAGGGTTT
TCTAGGCTAGATCATGAGATATTTGAGTTTGAAATTTTGCTGACTCAGCG
TTTTTCAACGTTTTTGGCCCTTTTCTGCTGAGTCAGCAAAATTTCAATCT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAATGAGACAAATGACC
CCATTTTGGAGATCTACTCTTCAAGCTCTATCTGATGGTACAATCAGTTT
TAGCTAAATGAGAACTTCAAAAATCGACTTTCTAATGACCCCCAGGCTAA
AATGACCCTACCCCCTTCATGCCCCCATAAAAAAATTTCCCCACCTTTGC
CAGCTTGGCAAAAACCTGTTTTGGGGTCCCAAGGGACCTGAGAAAATAAA
ATAAAAACCCATATTTACTACTTGTAAGGGTTGATGCAAAAAAACCCTTT
TCGCCGCCGGACTAATTAATTACGTCTGGAGTTAACAATTTAATCCCACT
CACGCTGCTTGCATCTTGACGCCATTTTTTTATGTTGTTTTTCTCTAGAG
ACTTTTTTCAGCGTGCACGATTGATTGACATATCAAAGTTACCAAGTGTC
GGACGACAAAAGAAGGGTTATGTTGTGGTTATTTTAGGTTTTGGAAATCA
AACTGTTACCATTTACTAGGGTTGTTTAAAAGTATTCTTTTTTTGATCTG
ATTATTAATATTCAATGGTCTGCTGATAGACCCATGTAGCTCTATTATCA
AGATCTCCCCTTCTTAGGTAAATAAAATGGAGCAGTTATTGAATAACAAA
AGTATGAGGGAACTAACACCAGAAGAGAAGTGGAGGTAAAAGTAGTGTGA
TCAAATTCATCAAATTCATCATTGATTTCTGCCCGACTCATAGTTTGAAA
ATCCATTTTTCTGACGTTATTTTCGCAGAAATGGGTGTTACCGACTCATT
TTATTTTTGCCTAAAAACGATGCAAACACAAGTTATTTGTGATTGTAGCC
TTATTAAAACTGCTAAACTAACTTAATGTGTTACACCAATCTCAGTAGTG
TAATCAAACGCTCAGTAGGTATCCTTTTATCATTGTTTTAACCACAGCAC
AAAGCAATATGTCCCAAACACTTGAGTTCTAGAGTCCATTTGCTTCAAGT
TTGAACTCTTTTTTTATACTTTATGGAAACTATGTCAGTGTAATTAGACT
AACGCCCTTGAGCATGGTAATGAACTTTTGTAATGAAGCTTTTGTAGGTC
TTAGCTTTTCAACCTAACAACATTGGTATCAATTCGAAAGCGATTCTTTA
TAGACCCAAATTTTATTCTTATATTTTATATCTTGTTTTTAATATTTATA
TATCTTAAATCATGACATTACGTGTAATTTCATGTGATATTCAAGTCTTT
TAAAAAACATTGTCTCCTTTGTTTTACAGGCAGGACCATGAAAAGCTACA
CGCTAAGCACAGAGGTCACGAAGCAATGCATTTGGAAATGGTGCTCATTC
TTTTTGCCACTTTATTTGTGATGCAAATAGTGCTGTTTAAATGGCAACAA
ATGCACAGCAGATCGTACAAGGTATTTCTTTGTAAATCTTTTTTTATAAA
AGTACAGAATTTGGTAAAAGCAAAAGCTATGTGGAGGGACTGAAGGAGAA
TTTAAAAATTGCATTCCATAGCAATAGAGAAAAAAGCCAACTGCATTTGC
CAGCGCTGTGTTTTGAGGTTGTAAAGATGAATCAAAGTACCTTTCTTTCA
ACTACCATGCCTGTCATGGTGACAGTGATCTTACTACTTCAGTGACGTGC
TCCTTTCCTATTTAAATTGATTGCTTCAATAGCAAAAAATATAAAATTGT
TAAATTTTTTATGGAGTATGGGTTTAATTTTATCTTCAGTTCTTAAAATA
GTATCCATACCATCAAAAAACAGATATGATCCTTTCTTAGCCCCTTAAGA
ATATGGGTGACGTGGGAAGAATGAAAACACTTGCATAAAATCGTAAAAGC
ATGATTGACGGGTCTTTCTTGCCTTTGATTGGCCAATACTTGTAAACATG
CAAATTCAAATCATTAAGATGGGGTATGATTTGTGAAATGTGGGGAAAGT
TTTAAAGAATTTGTTCAGACTGAATGATTACAGATTTCTTTTTTTTTGCA
GATGGTGACGTTGATAGGGATGTGGGTCTTCCCTTTCATCTTCACAGTAA
GGCATGGATGGTATCGGATGATATCTGTATGGTCGATCTTCACAATCATC
ACACTCTTTGTCATATGGAAAGCCACCAGGTTTCCTGTAAACCCAACAAC
CCCAAGGTACGTAATTCAGTTATTCTGAAAGATTTGGTTTTTGTACCCAA
AATTTCACAAAAGTTTTTTATATTTGTCTTCTATCTTCTCGTTAACTCGG
CTGGATATAATACAATGATCAAAAGATTGCTTGAATTAAAGTTCCTACCA
GATTGTTTAAGGGAGGAATTTGCAAAGAACGAAATTCAAAAATAATACAA
TTTACTAAATGTAAGGGTTATTTTGATGCTAAACTACTGGTCAATTGACA
TAGTGTGCAACCCCCCAGAATAGTGGGGGGGGGGTTTGCTGTTTTGGGTC
AGAAATTTCTAGATTTTTTTACTGTTCTAGGCTTTTCTCTTTTTTATTAT
TATACTGTAATTTCTTCAGGGGGAGGGATCTAAAATCTCGGTCATATAAT
ATGAATCATACTAAAGTATTTTGGAGAATGTCTTGTATACCACCACCTTA
ATTTTGACAAGTGGTATTTTAGTACCCTTGCCAGTCCTTGAATTAAATAT
TTTAAAGACATTAGGACACAAAGACCACCCAATTTTGGTATTTTCGAGAC
AGATTTTGTCTTCTCAGAACCATTTTCCTCGCGAGTGCTGATTTTATGCA
AGATGATATCTATTTTCCTCAAAAATCTATTAAACAATGCTGCTTCTGAA
TTGAGCAAACATTAAAGATATTTGATTGAANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCAATAATTTTTGTTTACCTTCTTCGTATTAGTATAATTTTT
CATGGGGATAGTAGTTTTAGCTGGGATCTGGGAGTCTGGATTGGAGGTGG
GAAATTTAGGGTTAGGTGGGACCTGGAACCCCCATTGCACACTATGATTG
AATTAAATTTAAACATTAAGTTCTTTGCCATTACTGGTTAGAAATAACGA
AACTGGTGCTTATCTGTCCTTTTCAGGCTCGTATACAAATGGTTTTACAA
CGTGCATCGTGTAACATATGCTTTAGGAATCATCGGTTACCTAATTATCA
TGATGACTTTCATGGGGTTCAACGTGTTGCTGCTCATCAAGCCTGAATTC
TCAATGCAAGCTGGTGTCATTATCATATTTTATGGACTTTATTATGGTGT
GCTAGGTAGAGATTGTGCTGAGTTGTGTGCAGATAAAATGGCTGCTAAAA
TGGGGGTAAGAGAATAATTTAGCTTTTGTATCCAGGGAGACTTATAAAAA
TACTTTTTATCATTCCCTTTCTTTATTAGAGACCCATTGACCTGTACCAA
CCAATGTTTTGATTTAATATGAAACCCTCTTTAATAAATAAACTCATTGT
TCTTATGCAATGGTTTATGCTTTTGAAGAACGAAGAGTGTATTAAAAAGT
TTACTCGAGAAAATTCACATAAACTCCTAAGTGTACAGAGAGACGAACAT
GATCTTTTTTTTACTTCTCACAAATTTAGTACTACAGTGAGACTGGTCTA
CCTTCCAAGCGTCTGATGCCAAACATCTGTGCAGTGTGTGGTCAGGAGTT
GACGCTGACAGCTATGGAAGATATGGAAGAGGATGATACTGAGAAAAGTT
ATAAATTATCTTGTGGTCATTTGTATCCTTTTCTCTCATTGGTTGATTTT
GCAATACACGTTTCTTATGATGACACCTCCATCACAAACATATTTTTTGA
GGACTATAATCAAATTAGCCTCCCTCATGACCATCTTACCACCTTTTTAT
TTTGGCTAATAATTCGCTAAATGAGAGGAGGTAGGTGGGTGATTGCATGC
ACCCTAAAAATGAAAGCTGACAAAAAGGTCGAAGATTTGTCTCCTGTTTT
TGTGGGATTTGGTATTTCTGATTTTGGCCTCTTGACCTGAATAAGCTTAT
GAGAAGTTTCAAGAACTGAACATCCTCTAACTAAAAGACACTCGCAGAGA
CCTACACTCTTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTTCTATA
AATTAACCCATGTCCGTTCGTCCGTCCGTCCGTTCGTCCGTCCGTCTGTT
ACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATCCTGTCATTACTT
TTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTCTCTAAAGAATGG
CTGAAGTGGTTTTTCCTGGAAAATTCTTATTCCCCTTAAAAAACGGATTT
TCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTC
TCAAAGTTGGCTCATTAGTTTTTTCTGATTTTTTGCACAATGATGCAAAA
TGGCAATGCCCAGAACGTGACGGAGCCCGATTTTTGAGAAAAAATTTATT
TGGGCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTGAAGTGGTTTTTCCCGGAAAATTCTTATTCGCCTTAA
AAAACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAAA
TATAGCTTTTATCAATGTTGACTCGTTATTTTTTTCTAATTTGTTGCACA
ATGATGCAAAATGGCAATGCCTAATATGTGTCGGAGCCCGATTTTCGAAA
AAAAATATATTTGGGCAAATTTGGGCCAAAAACTGCCTAAAAATAGGGTT
TTTTGGACTTGGTGCAAAATCCTGTCGTTACTTTTTTCTGATTTTTTGTA
CAAAGATGGAGGGCAAGATTCTCTAAAGAATGGCTGAAGTGGTTTTTCCT
GGAAAATTCTTATTCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTTTAAGGAAAATTTTTTGGGCAAATTTGGGCCAAAAACAG
CTTAAAAGGTTTTTTGGGCCTGAATGGTTTAAGTGATTTTCGTATTTGGG
GAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCTAATTCTTTCTAGATCAGGAGATATAAGCCCTTAAA
GTTTGAACTAGCGATTTTTAAAAAAAAACTTAGAAAAAAAGACCCTGGCA
CTCAAAGGGTTAATCCAGTCAAATTCATGGTTCTTATGTACCCTATATGG
TTTTTCCAAATTTTGTTTTACCGAAAACAGTAATATCTCTTCTCATCAGT
GAATGTAATTTATGATAATACTAGCTGTTCCGGTGTCGTCGGAGACGACT
TTGCTGCAATTTTTTTTCTCGCTAACTTTAAATGTGCCATCCAGCTCTCG
GTAATTTGAAAAACTTTGGTGTTAAGATAATGGACATGGAATGAGATTCT
TCAGGCAATGGCGGAAAATACATGTGGGTCATCCATTTAGTACGTACGCA
AAAAATGTCCAAATATTTGACACCACCTTCCCTGCGTACGTACTACATGG
ATTTTTTCTGTGGTTCATTGTCAACACCGATATCTTTTTCCTTGACAGAA
AATTTATTTTAGATTCCACGAGTTTTGTATACGTGGTTGGTGCATCGTCG
GGAAGAAACAGACCTGTCCGTATTGTAAAGAAAAAGTCGATCTTAAAAGA
ATGTTCAAGAATCCGTATCCTTTTCATCGTAGATATTGCTGAAAATTGGT
CGGTTTTTTTATAGGCTTTTGATCTTTGGTATGAAGTAAATAGTTTTGAT
TTGTTCAGATTATCACGTCAAGACCCTTACCATCAATCATAAACCCTTAT
ACTTCTTCAAACAGATCACAGTTGATTATACTTTATTGTTTTGAATTGGT
GTCAAATGCTTAAGATTCTCTCACATAATGGAATGCAGAGCTCCCTGTGT
TACTTTTTTGTTATTACAAATGACTTTAAAATGGCTATGCTTTTTATGGG
TAGTTTTATTGGACTTGTAGCCTGATTTGGTTTTGTTGAAAATTTCAAGG
TTCAGTTTATTAGTGCTTAAAGGTTATTTTATTATGCTATTAATCAAAAT
AGATCAATTAGTTTACCAAAAAGAAGTTAGTCTTCCCTTCTAGCGAAAAC
TATTGGTAGTATAAGTCTGCGAATCAAAGCGAGAAGTTTAATAAGTTATG
TTCTCAACGTGTCTGATGCTATCTATCTATCATCTTTCTTTGACCACCTT
CATCGCGTAAACAATGTTTAGATGGGAACGACCTCACATTTTATTTGGAC
AACTGTTGGATTGGTTGCGTTATTTCATCGTATGGCTTCCAGTCATCATT
CTCGTAACACGTGGTATTAATTACGAACTGGGGCTAGAATGAAATTGTAC
GGTCAAACCCAAATTTCAAAAAGGCTCAAAAATTCGATTTAGTCTCCCAA
CGGATGAGATTTGTTCTTAACTGGAACGTTATAATACTGAAATCAAACAA
ATTTCTGACAATGAATTGGTAGAAAAAACTTTTCCGTTTGTTGCACGCAC
AAGTTCATCATTGCCAACAAAGTAATGTCTGTCATACAATAAAAGATGTA
CCAATATGGTGAATTAGGGTTACAAGATTTTATACACAGAAAGATGACAT
GGAACAAAACAATTTTACTTCACATCCTAGCAATAGGGATCTTGTCGCTA
CAATTTTTACCTTTTTAACATCCATGTTTCATTATCCCTAGAAAAACGAT
AGGGCGACACTTCTGTAGACTGAATTTCTGGTATTGCATCTGAGATTTGG
AGGTTTATTGTATATTTTGAAAGTTTATTTTTAATGTTCAATCTCTGAAG
GGGCTTCACAGGGTCAAACTACTCAGCAAACATTGAGGTTTTTCAAATTC
AGTGGATTTGATCGAAACGGATGAAACGTGGGTGTTCTTATTTTAGATAG
GGTCTAAATTAGGAATTGAATAATTAGTTATTTTGAATAATTTTCGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018291-exon-sc0000295-1575043694:148596..148625 | TCONS_00018291-exon-sc0000295-1575043694:148596..148625 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1575043694:141641..141708 | TCONS_00018291-exon-sc0000295-1575043694:141641..141708 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1575043694:140905..141046 | TCONS_00018291-exon-sc0000295-1575043694:140905..141046 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1575043694:140170..140324 | TCONS_00018291-exon-sc0000295-1575043694:140170..140324 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1575043694:138321..138549 | TCONS_00018291-exon-sc0000295-1575043694:138321..138549 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1575043694:137904..138046 | TCONS_00018291-exon-sc0000295-1575043694:137904..138046 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1575043694:135212..135313 | TCONS_00018291-exon-sc0000295-1575043694:135212..135313 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1575043694:133928..134654 | TCONS_00018291-exon-sc0000295-1575043694:133928..134654 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1510915933:148596..148625 | TCONS_00018291-exon-sc0000295-1510915933:148596..148625 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1510915933:141641..141708 | TCONS_00018291-exon-sc0000295-1510915933:141641..141708 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1510915933:140905..141046 | TCONS_00018291-exon-sc0000295-1510915933:140905..141046 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1510915933:140170..140324 | TCONS_00018291-exon-sc0000295-1510915933:140170..140324 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1510915933:138321..138549 | TCONS_00018291-exon-sc0000295-1510915933:138321..138549 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1510915933:137904..138046 | TCONS_00018291-exon-sc0000295-1510915933:137904..138046 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1510915933:135212..135313 | TCONS_00018291-exon-sc0000295-1510915933:135212..135313 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1510915933:133928..134654 | TCONS_00018291-exon-sc0000295-1510915933:133928..134654 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1491911889:148596..148625 | TCONS_00018291-exon-sc0000295-1491911889:148596..148625 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1491911889:141641..141708 | TCONS_00018291-exon-sc0000295-1491911889:141641..141708 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1491911889:140905..141046 | TCONS_00018291-exon-sc0000295-1491911889:140905..141046 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1491911889:140170..140324 | TCONS_00018291-exon-sc0000295-1491911889:140170..140324 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1491911889:138321..138549 | TCONS_00018291-exon-sc0000295-1491911889:138321..138549 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1491911889:137904..138046 | TCONS_00018291-exon-sc0000295-1491911889:137904..138046 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1491911889:135212..135313 | TCONS_00018291-exon-sc0000295-1491911889:135212..135313 | Clytia hemisphaerica | exon |
| TCONS_00018291-exon-sc0000295-1491911889:133928..134654 | TCONS_00018291-exon-sc0000295-1491911889:133928..134654 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000295 | supercontig | sc0000295:133928..148625 - |
Blast
BLAST of TCONS_00018291 vs. Swiss-Prot (Human)
Match: RN121 (RING finger protein 121 OS=Homo sapiens GN=RNF121 PE=1 SV=1) HSP 1 Score: 415.616 bits (1067), Expect = 1.332e-141 Identity = 189/315 (60.00%), Postives = 244/315 (77.46%), Query Frame = 1
Query: 43 EQLLNNKSMRELTPEEKWRQDHEKLHAKHRGHEAMHLEMVLILFATLFVMQIVLFKWQQMHSRSYKMVTLIGMWVFPFIFTVRHGWYRMISVWSIFTIITLFVIWKATRFPVNPTTPRLVYKWFYNVHRVTYALGIIGYLIIMMTFMGFNVLLLIKPEFSMQAGVIIIFYGLYYGVLGRDCAELCADKMAAKMGYYSETGLPSKRLMPNICAVCGQELTLTAXXXXXXXXTEKSYKLSCGHLFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMFKNPWERPHILFGQLLDWLRYFIVWLPVIILVTRGINYELGLE 987
E+ L+ M +L+PEE+WR +H ++HAKHRGHEAMH EMVLIL ATL V Q++L +W+Q H RSY MVTL MWV P FTV+ W+R + +W +F+ +T FV ++ATR P+ TTPRLVYKWF +++++YA GI+GY+ +M T G N+L IKPE +M G+ ++FYGLYYGVL RD AE+CAD MA+ +G+YSE+G+P+K L ++CAVCGQ++ + EE E +Y+LSC H+FHEFCIRGWCIVGKKQTCPYCKEKVDLKRMF NPWERPH+++GQLLDWLRY + W PVII V +GINY LGLE
Sbjct: 16 ERELDEVDMSDLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTLFQMWVVPLYFTVKLHWWRFLVIWILFSAVTAFVTFRATRKPLVQTTPRLVYKWFLLIYKISYATGIVGYMAVMFTLFGLNLLFKIKPEDAMDFGISLLFYGLYYGVLERDFAEMCADYMASTIGFYSESGMPTKHLSDSVCAVCGQQIFVDV---SEEGIIENTYRLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMFSNPWERPHVMYGQLLDWLRYLVAWQPVIIGVVQGINYILGLE 327
The following BLAST results are available for this feature:
|
