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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00018269 ID=TCONS_00018269|Name=TCONS_00018269|organism=Clytia hemisphaerica|type=transcript|length=2525bp
GTTGTCAGAGAGGAATAAAtactttttcaatcagtgatacTGACCTTTCT
TATTGGAATGTGTTTTGTCAGGAATCTTAAATATCTGATTCTTTTATTTA
AGTGAATTATAAAAATATGCTCCAATAAAGCAATTATGAAGCTACATCAC
TTAACCATCACATGTAATGATGCTCTAAAAGCAAAGATTAAGTTCACTTC
ACTGTATTCATTCAAAGCATATGGGTACTTGGTAGTCAACAAAAGTAAGG
ATATAATTGAAGTCTTGAGGCATGGagacatttttattttgttaaagcAA
TCCTCAGAGCAAATTGCAGACACTGTTGATGATGTTGCTTTTGTTGTTGA
AGATTTGGAAACAATCTGTCAAAATACTTTAAATAACGGAAGCATTGTAG
TCCAGTCACCAAGAACTGAATCATGTCAAACCTATTCTGGAGTGTGTAAA
CCATGTAAGAATTGTAAAAGTAATTTAACACCATGTTTGTACATCATCAG
TAAAGCCATTGTGAAATCACCAATTGGAAATTTACAACATACcattttaa
acaaaacaaattttcatggAGATTTTCTGCCTGGTTTTGTCTCATATGAA
GAAAGCCTTGTTGACCAGGAGAAGAATAACGAAATGTTTGATTGTATTGA
CCATGTTGCGTTAGCTGTGCCTTGTggtgaaacaatgaaacacatcaTGT
GGTATAAAGAATGCTTgcaattatttaatttttattgtaaCAGACTAGAA
AAAGATGATAGCCTTGTAATTCGTTCCAAGATGGGTCAAGGAATAAGACT
GTATACCTTAGTAGCTCATCCCTGCTCAGAGGCTGGCTTGATTACAGAAG
AACATGAAATTGGAAACGAaagattcaaatttgtattttgtgAATCATTA
GAATTAGAAGGAAAGGATCAGATTAATAGCTTTCTAAAGAAACACAATGG
ACCTGGTGTTCAGCATGTAGCCTTCAAATCATCTGCCATCGTGCAAGACA
CAAAAATCTGGCATCAGAACGGAGTCAAATTTTTATCACCACCAATAGAG
TACTACAACATAattgacACTACCTTGAGTAAACTAGAGACACGTCAGAG
TGGCCTCTCAAGCTCAGTTCAAGAccttggaattcttatcgatGTAGAGA
AGATAAGTAACACTGACGGCGACAAAGAAGAAGAAGGgtttttatACCAA
GTGTTCACTTCACCAATATTACCATCAGAGACATTCTTTTTTGAACTCAT
TCAACGTGAAAACAGTCATGGTTTTGGTGCTGGTAATGTAGCTGCTTTAT
GGAATGCTGTTGAAATGAGTAATATGAAGGGAATAAGATAGAAGCATACG
AAATGATTTTGAATTTGTGAAAAACTTACAAAGTGAACTTCGTCAtaatt
tgtttgatttcttggACTTTGCAAACTGGATATTGTTTTGTTATCATTTG
TAATATATCTATCTTCGGACTACTTCtttcattaaaggttttgtttttaa
ataagagtgatatcaattttaatttacaagctttttggacctacctggag
gtcctataaattaacctttgttcgtccgtccgtccgtccgtctgtccgtc
cgtccgtctgttaccagcttttctcgagattggctcattagttttttttg
atttttggcacaaagatgcaaaatggcaatgcccaaaatgtgacggagcc
cgattttcgaaaaaaaaaattttccggcttaaattgccggaaatatgccg
gaaaaaccggttttttgatattttctcgagatttcatcattagttttctc
agattttttgctaaaagatgcgtattaacaatgctcaaaacatgaccggg
tccgatttttgagaaaaaattttttctggctgaaaatgtcggaaatatgc
cggaaatcaccgtttttctgaattttcattagactttttcctcataattg
gttgttttttcattcaataacattattgatagcaatgcccaccatcaagc
atgtttcaattttcaataaaattgatttttgaagccggaactattaaaAA
ATCGCTGGAACAACCTATATTCGCCGGAAAGACAGTATTTCTTgaatttc
tcgagctgtactttatatatttttatgaaattttgcacactgatgcaaaa
tgacaatacctaaaatgtgacggagcccgattttagaaaaacattttttt
ccggccgaaaatgccggaaaaaccggttttttgacattttctcgaatttt
catccttagttatttctgattttttgcagaaagatccgtattcgcaatgc
tcaaaacatgacggagttcgattttttgagaaattttttttcccggccga
aaatgccggaaatcgccgtttttgcagatttttgcaattttgcaaaaaat
tatattttctaacGGATTGTTtccgtttttctccttattgctatctaact
ttcatcatcaggtaggttgaaaaacgaatttttatctataagaatcacta
tatataagcatagatcaatattatt Run BLAST on NCBI protein sequence of TCONS_00018269-protein >TCONS_00018269-protein ID=TCONS_00018269-protein|Name=TCONS_00018269-protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
MKLHHLTITCNDALKAKIKFTSLYSFKAYGYLVVNKSKDIIEVLRHGDIF
ILLKQSSEQIADTVDDVAFVVEDLETICQNTLNNGSIVVQSPRTESCQTY
SGVCKPCKNCKSNLTPCLYIISKAIVKSPIGNLQHTILNKTNFHGDFLPG
FVSYEESLVDQEKNNEMFDCIDHVALAVPCGETMKHIMWYKECLQLFNFY
CNRLEKDDSLVIRSKMGQGIRLYTLVAHPCSEAGLITEEHEIGNERFKFV
FCESLELEGKDQINSFLKKHNGPGVQHVAFKSSAIVQDTKIWHQNGVKFL
SPPIEYYNIIDTTLSKLETRQSGLSSSVQDLGILIDVEKISNTDGDKEEE
GFLYQVFTSPILPSETFFFELIQRENSHGFGAGNVAALWNAVEMSNMKGI
R Run BLAST on NCBI transcript from alignment at sc0000295:304081..307142+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00018269 ID=TCONS_00018269|Name=TCONS_00018269|organism=Clytia hemisphaerica|type=transcript|length=3062bp|location=Sequence derived from alignment at sc0000295:304081..307142+ (Clytia hemisphaerica)
GTTGTCAGAGAGGAATAAAtactttttcaatcagtgatacTGACCTTTCT
TATTGGAATGTGTTTTGTCAGGAATCTTAAATATCTGATTCTTTTATTTA
AGTGAATTATAAAAATATGCTCCAATAAAGCAATTATGAAGCTACATCAC
TTAACCATCACATGTAATGATGCTCTAAAAGCAAAGATTAAGTTCACTTC
ACTGTATTCATTCAAAGCATATGGGTACTTGGTAGTCAACAAAAGTAAGG
ATATAATTGAAGTCTTGAGGCATGGagacatttttattttgttaaagcAA
TCCTCAGAGCAAATTGCAGACACTGTTGATGATGTTGCTTTTGTTGTTGA
AGATTTGGAAACAATCTGTCAAAATACTTTAAATAACGGAAGCATTGTAG
TCCAGTCACCAAGAACTGAATCATGTCAAACCTATTCTGGAGTGTGTAAA
CCATGTAAGAATTGTAAAAGTAATTTAACACCATGTTTGTACATCATCAG
TAAAGCCATTGTGAAATCACCAATTGGAAATTTACAACATACcattttaa
acaaaacaaattttcatggAGATTTTCTGCCTGGTTTTGTCTCATATGAA
GAAAGCCTTGTTGACCAGGAGAAGAATAACGAAATGTTTGATTGTATTGA
CCATGTTGCGTTAGCTGTGCCTTGTggtgaaacaatgaaacacatcaTGT
GGTATAAAGAATGCTTgcaattatttaatttttattgtaaCAGACTAGAA
AAAGATGATAGCCTTGTAATTCGTTCCAAGATGGGTCAAGGAATAAGACT
GTATACCTTAGTAGCTCATCCCTGCTCAGAGGCTGGCTTGATTACAGAAG
AACATGAAATTGGAAACGAaagattcaaatttgtattttgtgAATCATTA
GAATTAGAAGGTAAGTATTCTCTTCTGAATTTattaaaggaaagatactt
ttCAGGGGAAAGGAATAGCAGAGCATAGCGTGACACTGTCTTTTGGTTTG
TGAATGTCAAGAACAACTTATGTTTATTCGAAACAGCAGAGATTCcatct
gaaataaaaatttcacttACACAGCTTTTAATATAATTATATTACCATTC
TTTAGGAAAGGATCAGATTAATAGCTTTCTAAAGAAACACAATGGACCTG
GTGTTCAGCATGTAGCCTTCAAATCATCTGCCATCGTGCAAGACACAAAA
ATCTGGCATCAGAACGGAGTCAAATTTTTATCACCACCAATAGAGTACTA
CAACATAGTAATTCTTCGtttaaattgttatttttcattttgttttcttt
gatttgttcTGTTTTCCCAAAAGGGCTGTAATAACTAATTTAGTAATACT
TATTATATAATATCTATATCCTAatattttttcgtcaaaatcgatTTTAC
TATTTTAAATAATGTATTAATAATatctaaattttcagattgacACTACC
TTGAGTAAACTAGAGACACGTCAGAGTGGCCTCTCAAGCTCAGTTCAAGA
ccttggaattcttatcgatGTAGAGAAGATAAGTAACACTGACGGCGACA
AAGAAGAAGAAGGGTTTggatttgcttgtttttctcaTCATTCTCTAAAT
TGCcttgattttgaaaacttttttaaattttagtgcGTTTACACAGCGAT
TGGTACTACTTGTTTTTATAACTCATAAAAATATGTACATTatccaaaaa
tttctttcttttttacattttcaggtttttatACCAAGTGTTCACTTCAC
CAATATTACCATCAGAGACATTCTTTTTTGAACTCATTCAACGTGAAAAC
AGTCATGGTTTTGGTGCTGGTAATGTAGCTGCTTTATGGAATGCTGTTGA
AATGAGTAATATGAAGGGAATAAGATAGAAGCATACGAAATGATTTTGAA
TTTGTGAAAAACTTACAAAGTGAACTTCGTCAtaatttgtttgatttctt
ggACTTTGCAAACTGGATATTGTTTTGTTATCATTTGTAATATATCTATC
TTCGGACTACTTCtttcattaaaggttttgtttttaaataagagtgatat
caattttaatttacaagctttttggacctacctggaggtcctataaatta
acctttgttcgtccgtccgtccgtccgtctgtccgtccgtccgtctgtta
ccagcttttctcgagattggctcattagttttttttgatttttggcacaa
agatgcaaaatggcaatgcccaaaatgtgacggagcccgattttcgaaaa
aaaaaattttccggcttaaattgccggaaatatgccggaaaaaccggttt
tttgatattttctcgagatttcatcattagttttctcagattttttgcta
aaagatgcgtattaacaatgctcaaaacatgaccgggtccgatttttgag
aaaaaattttttctggctgaaaatgtcggaaatatgccggaaatcaccgt
ttttctgaattttcattagactttttcctcataattggttgttttttcat
tcaataacattattgatagcaatgcccaccatcaagcatgtttcaatttt
caataaaattgatttttgaagccggaactattaaaAAATCGCTGGAACAA
CCTATATTCGCCGGAAAGACAGTATTTCTTgaatttctcgagctgtactt
tatatatttttatgaaattttgcacactgatgcaaaatgacaatacctaa
aatgtgacggagcccgattttagaaaaacatttttttccggccgaaaatg
ccggaaaaaccggttttttgacattttctcgaattttcatccttagttat
ttctgattttttgcagaaagatccgtattcgcaatgctcaaaacatgacg
gagttcgattttttgagaaattttttttcccggccgaaaatgccggaaat
cgccgtttttgcagatttttgcaattttgcaaaaaattatattttctaac
GGATTGTTtccgtttttctccttattgctatctaactttcatcatcaggt
aggttgaaaaacgaatttttatctataagaatcactatatataagcatag
atcaatattatt Coding sequence (CDS) from alignment at sc0000295:304081..307142+ >TCONS_00018269 ID=TCONS_00018269|Name=TCONS_00018269|organism=Clytia hemisphaerica|type=CDS|length=4824bp|location=Sequence derived from alignment at sc0000295:304081..307142+ (Clytia hemisphaerica)
ATGAAGCTACATCACTTAACCATCACATGTAATGATGCTCTAAAAGCAAA
GATTAAGTTCACTTCACTGTATTCATTCAAAGCATATGGGTACTTGGTAG
TCAACAAAAGTAAGGATATAATTGAAGTCTTGAGGCATGGagacattttt
attttgttaaagcAATCCTCAGAGCAAATTGCAGACACTGTTGATGATGT
TGCTTTTGTTGTTGAAGATTTGGAAACAATCTGTCAAAATACTTTAAATA
ACGGAAGCATTGTAGTCCAGTCACCAAGAACTGAATCATGTCAAACCTAT
TCTGGAGTGTGTAAACCATGTAAGAATTGTAAAAGTAATTTAACACCATG
TTTGTACATCATCAGTAAAGCCATTGTGAAATCACCAATTGGAAATTTAC
AACATACcattttaaacaaaacaaattttcatggAGATTTTCTGCCTGGT
TTTGTCTCATATGAAGAAAGCCTTGTTGACCAGGAGAAGAATAACGAAAT
GTTTGATTGTATTGACCATGTTGCGTTAGCTGTGCCTTGTggtgaaacaa
tgaaacacatcaTGTGGTATAAAGAATGCTTgcaattatttaatttttat
tgtaaCAGACTAGAAAAAGATGATAGCCTTGTAATTCGTTCCAAGATGGG
TCAAGGAATAAGACTGTATACCTTAGTAGCTCATCCCTGCTCAGAGGCTG
GCTTGATTACAGAAGAACATGAAATTGGAAACGAaagattcaaatttgta
ttttgtgAATCATTAGAATTAGAAGGAAAGGATCAGATTAATAGCTTTCT
AAAGAAACACAATGGACCTGGTGTTCAGCATGTAGCCTTCAAATCATCTG
CCATCGTGCAAGACACAAAAATCTGGCATCAGAACGGAGTCAAATTTTTA
TCACCACCAATAGAGTACTACAACATAattgacACTACCTTGAGTAAACT
AGAGACACGTCAGAGTGGCCTCTCAAGCTCAGTTCAAGAccttggaattc
ttatcgatGTAGAGAAGATAAGTAACACTGACGGCGACAAAGAAGAAGAA
GGgtttttatACCAAGTGTTCACTTCACCAATATTACCATCAGAGACATT
CTTTTTTGAACTCATTCAACGTGAAAACAGTCATGGTTTTGGTGCTGGTA
ATGTAGCTGCTTTATGGAATGCTGTTGAAATGAGTAATATGAAGGGAATA
AGATAGATGAAGCTACATCACTTAACCATCACATGTAATGATGCTCTAAA
AGCAAAGATTAAGTTCACTTCACTGTATTCATTCAAAGCATATGGGTACT
TGGTAGTCAACAAAAGTAAGGATATAATTGAAGTCTTGAGGCATGGagac
atttttattttgttaaagcAATCCTCAGAGCAAATTGCAGACACTGTTGA
TGATGTTGCTTTTGTTGTTGAAGATTTGGAAACAATCTGTCAAAATACTT
TAAATAACGGAAGCATTGTAGTCCAGTCACCAAGAACTGAATCATGTCAA
ACCTATTCTGGAGTGTGTAAACCATGTAAGAATTGTAAAAGTAATTTAAC
ACCATGTTTGTACATCATCAGTAAAGCCATTGTGAAATCACCAATTGGAA
ATTTACAACATACcattttaaacaaaacaaattttcatggAGATTTTCTG
CCTGGTTTTGTCTCATATGAAGAAAGCCTTGTTGACCAGGAGAAGAATAA
CGAAATGTTTGATTGTATTGACCATGTTGCGTTAGCTGTGCCTTGTggtg
aaacaatgaaacacatcaTGTGGTATAAAGAATGCTTgcaattatttaat
ttttattgtaaCAGACTAGAAAAAGATGATAGCCTTGTAATTCGTTCCAA
GATGGGTCAAGGAATAAGACTGTATACCTTAGTAGCTCATCCCTGCTCAG
AGGCTGGCTTGATTACAGAAGAACATGAAATTGGAAACGAaagattcaaa
tttgtattttgtgAATCATTAGAATTAGAAGGAAAGGATCAGATTAATAG
CTTTCTAAAGAAACACAATGGACCTGGTGTTCAGCATGTAGCCTTCAAAT
CATCTGCCATCGTGCAAGACACAAAAATCTGGCATCAGAACGGAGTCAAA
TTTTTATCACCACCAATAGAGTACTACAACATAattgacACTACCTTGAG
TAAACTAGAGACACGTCAGAGTGGCCTCTCAAGCTCAGTTCAAGAccttg
gaattcttatcgatGTAGAGAAGATAAGTAACACTGACGGCGACAAAGAA
GAAGAAGGgtttttatACCAAGTGTTCACTTCACCAATATTACCATCAGA
GACATTCTTTTTTGAACTCATTCAACGTGAAAACAGTCATGGTTTTGGTG
CTGGTAATGTAGCTGCTTTATGGAATGCTGTTGAAATGAGTAATATGAAG
GGAATAAGATAGATGAAGCTACATCACTTAACCATCACATGTAATGATGC
TCTAAAAGCAAAGATTAAGTTCACTTCACTGTATTCATTCAAAGCATATG
GGTACTTGGTAGTCAACAAAAGTAAGGATATAATTGAAGTCTTGAGGCAT
GGagacatttttattttgttaaagcAATCCTCAGAGCAAATTGCAGACAC
TGTTGATGATGTTGCTTTTGTTGTTGAAGATTTGGAAACAATCTGTCAAA
ATACTTTAAATAACGGAAGCATTGTAGTCCAGTCACCAAGAACTGAATCA
TGTCAAACCTATTCTGGAGTGTGTAAACCATGTAAGAATTGTAAAAGTAA
TTTAACACCATGTTTGTACATCATCAGTAAAGCCATTGTGAAATCACCAA
TTGGAAATTTACAACATACcattttaaacaaaacaaattttcatggAGAT
TTTCTGCCTGGTTTTGTCTCATATGAAGAAAGCCTTGTTGACCAGGAGAA
GAATAACGAAATGTTTGATTGTATTGACCATGTTGCGTTAGCTGTGCCTT
GTggtgaaacaatgaaacacatcaTGTGGTATAAAGAATGCTTgcaatta
tttaatttttattgtaaCAGACTAGAAAAAGATGATAGCCTTGTAATTCG
TTCCAAGATGGGTCAAGGAATAAGACTGTATACCTTAGTAGCTCATCCCT
GCTCAGAGGCTGGCTTGATTACAGAAGAACATGAAATTGGAAACGAaaga
ttcaaatttgtattttgtgAATCATTAGAATTAGAAGGAAAGGATCAGAT
TAATAGCTTTCTAAAGAAACACAATGGACCTGGTGTTCAGCATGTAGCCT
TCAAATCATCTGCCATCGTGCAAGACACAAAAATCTGGCATCAGAACGGA
GTCAAATTTTTATCACCACCAATAGAGTACTACAACATAattgacACTAC
CTTGAGTAAACTAGAGACACGTCAGAGTGGCCTCTCAAGCTCAGTTCAAG
AccttggaattcttatcgatGTAGAGAAGATAAGTAACACTGACGGCGAC
AAAGAAGAAGAAGGgtttttatACCAAGTGTTCACTTCACCAATATTACC
ATCAGAGACATTCTTTTTTGAACTCATTCAACGTGAAAACAGTCATGGTT
TTGGTGCTGGTAATGTAGCTGCTTTATGGAATGCTGTTGAAATGAGTAAT
ATGAAGGGAATAAGATAGATGAAGCTACATCACTTAACCATCACATGTAA
TGATGCTCTAAAAGCAAAGATTAAGTTCACTTCACTGTATTCATTCAAAG
CATATGGGTACTTGGTAGTCAACAAAAGTAAGGATATAATTGAAGTCTTG
AGGCATGGagacatttttattttgttaaagcAATCCTCAGAGCAAATTGC
AGACACTGTTGATGATGTTGCTTTTGTTGTTGAAGATTTGGAAACAATCT
GTCAAAATACTTTAAATAACGGAAGCATTGTAGTCCAGTCACCAAGAACT
GAATCATGTCAAACCTATTCTGGAGTGTGTAAACCATGTAAGAATTGTAA
AAGTAATTTAACACCATGTTTGTACATCATCAGTAAAGCCATTGTGAAAT
CACCAATTGGAAATTTACAACATACcattttaaacaaaacaaattttcat
ggAGATTTTCTGCCTGGTTTTGTCTCATATGAAGAAAGCCTTGTTGACCA
GGAGAAGAATAACGAAATGTTTGATTGTATTGACCATGTTGCGTTAGCTG
TGCCTTGTggtgaaacaatgaaacacatcaTGTGGTATAAAGAATGCTTg
caattatttaatttttattgtaaCAGACTAGAAAAAGATGATAGCCTTGT
AATTCGTTCCAAGATGGGTCAAGGAATAAGACTGTATACCTTAGTAGCTC
ATCCCTGCTCAGAGGCTGGCTTGATTACAGAAGAACATGAAATTGGAAAC
GAaagattcaaatttgtattttgtgAATCATTAGAATTAGAAGGAAAGGA
TCAGATTAATAGCTTTCTAAAGAAACACAATGGACCTGGTGTTCAGCATG
TAGCCTTCAAATCATCTGCCATCGTGCAAGACACAAAAATCTGGCATCAG
AACGGAGTCAAATTTTTATCACCACCAATAGAGTACTACAACATAattga
cACTACCTTGAGTAAACTAGAGACACGTCAGAGTGGCCTCTCAAGCTCAG
TTCAAGAccttggaattcttatcgatGTAGAGAAGATAAGTAACACTGAC
GGCGACAAAGAAGAAGAAGGgtttttatACCAAGTGTTCACTTCACCAAT
ATTACCATCAGAGACATTCTTTTTTGAACTCATTCAACGTGAAAACAGTC
ATGGTTTTGGTGCTGGTAATGTAGCTGCTTTATGGAATGCTGTTGAAATG
AGTAATATGAAGGGAATAAGATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00018269-exon-sc0000295-1491911889:304081..304990 | TCONS_00018269-exon-sc0000295-1491911889:304081..304990 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1510915933:304081..304990 | TCONS_00018269-exon-sc0000295-1510915933:304081..304990 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1575043694:304081..304990 | TCONS_00018269-exon-sc0000295-1575043694:304081..304990 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1491911889:305186..305337 | TCONS_00018269-exon-sc0000295-1491911889:305186..305337 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1510915933:305186..305337 | TCONS_00018269-exon-sc0000295-1510915933:305186..305337 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1575043694:305186..305337 | TCONS_00018269-exon-sc0000295-1575043694:305186..305337 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1491911889:305519..305643 | TCONS_00018269-exon-sc0000295-1491911889:305519..305643 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1510915933:305519..305643 | TCONS_00018269-exon-sc0000295-1510915933:305519..305643 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1575043694:305519..305643 | TCONS_00018269-exon-sc0000295-1575043694:305519..305643 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1491911889:305805..307142 | TCONS_00018269-exon-sc0000295-1491911889:305805..307142 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1510915933:305805..307142 | TCONS_00018269-exon-sc0000295-1510915933:305805..307142 | Clytia hemisphaerica | exon |
| TCONS_00018269-exon-sc0000295-1575043694:305805..307142 | TCONS_00018269-exon-sc0000295-1575043694:305805..307142 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000295 | supercontig | sc0000295:304081..307142 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR029068 | Glyas_Bleomycin-R_OHBP_Dase |
Blast
BLAST of TCONS_00018269 vs. Swiss-Prot (Human)
Match: HPDL (4-hydroxyphenylpyruvate dioxygenase-like protein OS=Homo sapiens GN=HPDL PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.679e-32 Identity = 91/281 (32.38%), Postives = 130/281 (46.26%), Query Frame = 1
Query: 505 AIVKSPIGNLQHTILNKTNFHGDFLPGFVSYEESLVDQEKNNEMFDCIDHVALAVPCGETMKHIMWYKECLQLFNFYCNRLEKDDSLVIRSKMG---QGIRLYTLVAHPCSEAGLITEEHEIGNERFKFVFCESLE--LEGKDQINSFLKKHNGPGVQHVAFKSSAIVQDTKIWHQNGVKFLSPPIEYYNIIDTTLSKLETRQSGLSSSV-QDLGILIDVEKISNTDGDKEEEGFLYQVFTSPILPSETFFFELIQRENSHGFGAGNVAALWNAVEMSNMK 1329
A+V SP G L T+L + + G FLPGF V +DH+ LA G + + W+ +CL + + E D L + G G+RL L A P G+ V ESL +DQ+ FL +H GPG+QHV + IV+ T+ G +FL+PP YY + + R +G + GIL+D GDK + FL QVFT + +TFF ELIQR+ + GFG GN+ ALW +V+ + +
Sbjct: 119 AVVSSPAGILSLTLLERAGYRGPFLPGFRP-----VSSAPGPGWVSRVDHLTLACTPGSSPTLLRWFHDCLGFCHLPLSPGE-DPELGLEMTAGFGLGGLRLTALQAQP-------------GSIVPTLVLAESLPGATTRQDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVATAGGQFLAPPGAYYQQPG---KERQIRAAGHEPHLLARQGILLD--------GDKGK--FLLQVFTKSLFTEDTFFLELIQRQGATGFGQGNIRALWQSVQEQSAR 367
The following BLAST results are available for this feature:
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