TCONS_00018269-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018269-protein
Unique Name	TCONS_00018269-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	401

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018269-protein ID=TCONS_00018269-protein|Name=TCONS_00018269-protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
MKLHHLTITCNDALKAKIKFTSLYSFKAYGYLVVNKSKDIIEVLRHGDIF
ILLKQSSEQIADTVDDVAFVVEDLETICQNTLNNGSIVVQSPRTESCQTY
SGVCKPCKNCKSNLTPCLYIISKAIVKSPIGNLQHTILNKTNFHGDFLPG
FVSYEESLVDQEKNNEMFDCIDHVALAVPCGETMKHIMWYKECLQLFNFY
CNRLEKDDSLVIRSKMGQGIRLYTLVAHPCSEAGLITEEHEIGNERFKFV
FCESLELEGKDQINSFLKKHNGPGVQHVAFKSSAIVQDTKIWHQNGVKFL
SPPIEYYNIIDTTLSKLETRQSGLSSSVQDLGILIDVEKISNTDGDKEEE
GFLYQVFTSPILPSETFFFELIQRENSHGFGAGNVAALWNAVEMSNMKGI
R

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010265	XLOC_010265	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018269	TCONS_00018269	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029068	Glyas_Bleomycin-R_OHBP_Dase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	GENE3D	3.10.180.10		coord: 1..167 e-value: 2.3E-6 score: 27.0
IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	GENE3D	3.10.180.10		coord: 168..399 e-value: 7.2E-37 score: 126.4
IPR029068	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	SUPERFAMILY	54593	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	coord: 1..389
None	No IPR available	CDD	cd07250	HPPD_C_like	coord: 171..394 e-value: 1.02254E-47 score: 161.953

Blast

[Close]

BLAST of TCONS_00018269-protein vs. Swiss-Prot (Human)
Match: HPDL (4-hydroxyphenylpyruvate dioxygenase-like protein OS=Homo sapiens GN=HPDL PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.368e-34
Identity = 91/281 (32.38%), Postives = 130/281 (46.26%), Query Frame = 0

Query:  124 AIVKSPIGNLQHTILNKTNFHGDFLPGFVSYEESLVDQEKNNEMFDCIDHVALAVPCGETMKHIMWYKECLQLFNFYCNRLEKDDSLVIRSKMG---QGIRLYTLVAHPCSEAGLITEEHEIGNERFKFVFCESLE--LEGKDQINSFLKKHNGPGVQHVAFKSSAIVQDTKIWHQNGVKFLSPPIEYYNIIDTTLSKLETRQSGLSSSV-QDLGILIDVEKISNTDGDKEEEGFLYQVFTSPILPSETFFFELIQRENSHGFGAGNVAALWNAVEMSNMK 398
            A+V SP G L  T+L +  + G FLPGF       V           +DH+ LA   G +   + W+ +CL   +   +  E D  L +    G    G+RL  L A P             G+     V  ESL      +DQ+  FL +H GPG+QHV   +  IV+ T+     G +FL+PP  YY        + + R +G    +    GIL+D        GDK +  FL QVFT  +   +TFF ELIQR+ + GFG GN+ ALW +V+  + +
Sbjct:  119 AVVSSPAGILSLTLLERAGYRGPFLPGFRP-----VSSAPGPGWVSRVDHLTLACTPGSSPTLLRWFHDCLGFCHLPLSPGE-DPELGLEMTAGFGLGGLRLTALQAQP-------------GSIVPTLVLAESLPGATTRQDQVEQFLARHKGPGLQHVGLYTPNIVEATEGVATAGGQFLAPPGAYYQQPG---KERQIRAAGHEPHLLARQGILLD--------GDKGK--FLLQVFTKSLFTEDTFFLELIQRQGATGFGQGNIRALWQSVQEQSAR 367

The following BLAST results are available for this feature:

BLAST of TCONS_00018269-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018269-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
HPDL	5.368e-34	32.38	4-hydroxyphenylpyruvate dioxygenase-like protein O...	[more]

You are here

TCONS_00018269-protein (polypeptide) - C. hemisphaerica