TCONS_00017694 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017694
Unique NameTCONS_00017694
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1878

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017694 ID=TCONS_00017694|Name=TCONS_00017694|organism=Clytia hemisphaerica|type=transcript|length=1878bp
aattaaaaagcaacAACAACAATATGGTGATGGTGCAACGGGATCATAGA
CACAGATATTATTACTCTAATAAaatggCTTTGTATAAAGATGAAATCTA
TGTTGCTTGGGATACTGTCGCTGGGAACATCATCAACCATTTATATGATA
TCTTTGTTATCGATGGTACATCGCAGAAAGTTGATATCCATATCTTTCTA
CACCAAAGCAAGTTACGTGACCAGAGGCTAGTAGACTGGCCtgaaaactt
tatttttcatttcacaAGTACGTCATCGGCTAATGCTTTGCAAACATCTG
TAATAGCATACGTGTTGGAGAAATTTGAACGTATTTCAAGAGAGCTAGAG
TTGGAGGAGGTCGTTGAGAAAAGTCGTGTTTTCTTTATCCAAGATTCTGA
AAGTCAATTTGAGGAGTTGAAAAGTATGTTGTATCGTATACCGTATATTA
AAAGCTCTTTTACATTCAAACTATTGTCTTTGACTGAAGATTTTAATACT
GAAATGTTGTTTCAAGTATCTTCGTTGAATAAGAGACGATCATTACAAGT
CAGTGGTCGAAGCAGTGTCACCTCTGACGAGACCTTTAATGTCTATGGTG
GTGCTACCACGCCCCGTTCTGTCCGCCATGGGCGTAGGGCGTCTGATTTT
CCTTCAAGTCCAGCACCGTTGTCTCAAAAAAGTAGTAATTTGTCACCACG
TGTTTTACAAAATGGGACTGGAACGAACAGTTGTAAGCATTGCGATAGGC
GACGCGGAAGTCAACCGAAATTTGATATGCAAGATAAGAAATTATTTTGT
ATGGCTTGTTTTTTGGATGATTCAGGTAGCGATCATGATTTGTGTCGGAT
TTGTCAACGCAAGAAAGATTTCACTGTCGAGGATAAGTCTACTATGACGA
TGAAGACAAACTCTAAGAACATGTCAATCCAGTGCGATATACCAGTCCAT
GAATACAAAGAGGCTACGACACAGACTAGGGTATATACAAACACTGTAAT
TGTACAGACTAGCATCAGTATACCAGTGGATCTACCGGCAgatttacaaa
gaaaacttGATGATTTGATGAAAGAGATTGATGATTATCGTAACCGACCC
CAAGGATTGCCAGAGTTGAATCTACCACAAGCTGATGACCCATTCCGTTT
AGTAGACGCTCAAATAAATCCAAACACCAACAAATTCGATTGTCCTTTCT
GTGAAGGAAAATCATTCGCCAAAATCAGTATCTTCGAAGTCCACTTACGT
AATGTCCATAAGAAATGTAATTGTTCATGCGAACGTTACTTCCCAACACG
TGAAGATTACTTAGATCATTTTTATTCCGTATTCCCGTTACCGTGTTTTG
AGCAACGTAAATGTCCGGAAAGATTCCGGTCCGTACCATACCAAGCTATA
CATCACGCTAAAGTACATTTCGCTGAAAAACCATACTGCTGTGTAATATG
TTTTGATAGTCAGGTCGAACCGAAAAAGAACTATCGCTTTAAGAGTGTCC
GCGCGCTTCAAATGCACGCTAAAGAAATGGGTCACGATGAAGAAGATATG
TTCTTAAGAGTTAAGAACACGGATGAGAATAGTCAAATCCCATTAACTGG
ACGTGCAAGTGCAATAAACTTTTCAGGAGATTTTTAATGAATGAATTTaa
tgtatgaaataaaactatTGTAGAGCATGAGGGTATGAATTTATACTAAC
CATTTTCTCGACGACATCAACATATGCAGACACATGATACCAATTGTAAT
CCATTTGATAATTATACTCATACATAAAagacactcccttctcacagacc
cttCCGACTGGAAAGATtcgccaaaatatcgtccccggtggaaaattgtc
ctccaatttttgccccgctgaaaaaaaa
Run BLAST on NCBI

protein sequence of TCONS_00017694-protein

>TCONS_00017694-protein ID=TCONS_00017694-protein|Name=TCONS_00017694-protein|organism=Clytia hemisphaerica|type=polypeptide|length=544bp
LKSNNNNMVMVQRDHRHRYYYSNKMALYKDEIYVAWDTVAGNIINHLYDI
FVIDGTSQKVDIHIFLHQSKLRDQRLVDWPENFIFHFTSTSSANALQTSV
IAYVLEKFERISRELELEEVVEKSRVFFIQDSESQFEELKSMLYRIPYIK
SSFTFKLLSLTEDFNTEMLFQVSSLNKRRSLQVSGRSSVTSDETFNVYGG
ATTPRSVRHGRRASDFPSSPAPLSQKSSNLSPRVLQNGTGTNSCKHCDRR
RGSQPKFDMQDKKLFCMACFLDDSGSDHDLCRICQRKKDFTVEDKSTMTM
KTNSKNMSIQCDIPVHEYKEATTQTRVYTNTVIVQTSISIPVDLPADLQR
KLDDLMKEIDDYRNRPQGLPELNLPQADDPFRLVDAQINPNTNKFDCPFC
EGKSFAKISIFEVHLRNVHKKCNCSCERYFPTREDYLDHFYSVFPLPCFE
QRKCPERFRSVPYQAIHHAKVHFAEKPYCCVICFDSQVEPKKNYRFKSVR
ALQMHAKEMGHDEEDMFLRVKNTDENSQIPLTGRASAINFSGDF
Run BLAST on NCBI

transcript from alignment at sc0000273:185142..191272-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017694 ID=TCONS_00017694|Name=TCONS_00017694|organism=Clytia hemisphaerica|type=transcript|length=6131bp|location=Sequence derived from alignment at sc0000273:185142..191272- (Clytia hemisphaerica)
AATTAAAAAGCAACAACAACAATATGGTGATGGTGCAACGGGATCATAGA
CACAGATATTATTACTCTAATAAGTAAGTTTCTTAACACCATTTTTAATC
TTGTTTCGATGCACTTTGGCTGATCCCCACCAAACTCGGAAAATATATCC
AAATAATTTCATCGAAATCCATAAATCCAGAGCCATTTTACATAAAACAA
AGACAATAGATTTTAAATTCCTCACTTTTTGAGAGAACATTCTCCATCCT
CAATGGTATTTTTCTCCTCTTTCTTTAACTGTCAGCACAGGTTTACTGCG
ATACTGGGGTGTGGTATGTATTAGACATTACACCCTGCTGCCGCATATCT
AGATCAAATGGGGATCCCATATCCAGTGCAGTTATCTTAACCGGTTCAAT
ACTTCCGTTTGACGCCTTACCGTTTTTATCCATAAAGCAAAAATTGAATT
TTGATGAAACATTATATTGATTAAATCAAAAGCTAAACACAACAAAATTT
CCTTCTAACAGAAGTAAATATGAAAAGGAAATTTCGATCTATGGAGTAAG
CTTTAAAGTCATTGTTGACTGAAAGGACCATATGTTTGTCAAGTTACAGT
AAGGGGACATTCGAGTTATAGAGGTTTGTAAACATTTTCACGATGGCAGA
ATTCTCTACACGTTTTTTTTATAAGAACAAACTATGAAGAACATAAGGCT
TCGATGGCCAAAACGTTAAAAACAAGTTAAAAACATTTTAAGGCTTCGAA
GACTCACCCAATTTCTTAAGAAAGGGCACAAAAATACTCAAAAAATGGCG
AAAATAAGAACATGTTAAGAACATTTTTAGGCTTAAAACTCAAAAAGTTT
TAAAAATTTTGAATATTCTTATTTAAAAAAAAACCTGTAGTCTAAGAGTT
TAATTGCCATGGATGTAACTAATTTCTAAAAGTCATTGTTTTCTCTCCAA
TTTTACTTTGTCATAATTTGTGGAAGATTCATATCGGTTGACCTCACAAA
ACGAATATCTATATACCTTAAGGGAAGAAATTTTCGCGAGAAGAAATTTT
CGCGGAAGAAATTTTCGCGGAATTTAATTTCGCGAATTTGGGTGTAATTC
GCGAAATTAAATTCCGCGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNATTGTTAAATCGCGAAATTAAATTCCGCGAAATTCG
ATTTTTTTTCTTCTTCTTTTATTTTGTTGTTTTTGACCAGGTATTACCAA
AAAATATGGACACAATTGACTTTTAAGCATTATAACGTGTATTTCTTATC
AAATATAAACAAATATAAATAACTCCGTGATGGTTAAAAGTTAATTTAAG
TTGATAAACTTCTTCTTAATCGCGAAATTAAATTCTGTGAAACTTTTGAA
ATCGGGTCAATCGCGAAATTAAATTCCGCGAAATTTGCCATTTTGAAACT
CTGATTCGCGAAATAAAATTCCGCGAAAATTTCTTCCCTTAAGGTATTAA
TAGTGGCAGTCTGTATGTGTGTTTGTCTGTGTTTTCTACTTTCGTTTTCT
AGCGCAATGTTTTTGTTCTTCCAAAAGATGACTTCCAGTTCTTGCTCCAC
AAATGTGTTAAACAATATTCGCGCCGTTTTATAAAGACTTTGTTTTGATT
GATAGGTTAGACTTTTTCTCTTTTTTTTCTTTCTTTTCTTTTGTTTTATG
TTTTCGAATGTAATTAACGACCTTATTTGATTTGAGACATTCGAATTCTT
TTCAAAACAAAAGAAATCTTTTAAACAGAATCTGTTAAAGAAAAGAACAA
ATATAAAATAAAACACAATAATCACATAACAAGTTTGTTAGAACACCCGG
TTAGAACAACAGCAACATTAAAAATACATTCAAAAGGCGGTAAAAACTAG
AATTCTTTCTTCGTAAAAAGGGACCTTTAAACATGTATGTCGATAATTAT
TTTGCTGTAAATCTAAGTCATTGTTGAATTTGAAAAATTATTGAAGTTAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGGGGACTATGGTTGCGAGCTGACTT
TCGGCCCTACCCCTCGGACCCTTAGCAGAATAAAGAGGAGAAGAAACAAG
GGAAATTGTGTGAATTTTAATTCACTCTTTGCAACTAATTTGACCAAATT
TCTGTCTTTCTGGGGCAAAAAGTTGAAATTTTCCTATTTTTCCAATTCTT
AGTGGGACTGAAGTTTGATTTTCCGATTTTTCAAACTGCCATGTTTCAAA
AAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNACATCAAGAACTACGACAAATATAA
CGCGAGCGAAGCGAGAAAAAAAATCTAATTGCAGAGCCGTCTCGGACGTC
GCTGGTCGCCGGTATGGTGTAATTTAAGAATGACGCCCTTTCTGTTTTCT
GATCATTTTTGCCACAAAAATCTTTTTCAAAATATGGGATTCGAACTACA
CAATTAGCAAGGCTTTTCAGTAATATTAACACAAATTAACACCATTTTGT
AATCAAAAGAAAAAGATTACTCGTGTTTCGAAATGACATAATTGGATGGG
GACTTAACATCTCTAACTCTCTACACAGTGCAATCTTCTTCTTTTTGTAA
GAACCATCAGTAAGTTTCTGCTGAACCTTTGTTGTTCTTAATTAACACCA
CTTTTGGCATAAAATGTTCTTAGCTTATGTTTTCAAGACAAAATTGAGAT
ATCTCAATATTTTTCGATCGATTTGAACCTTGATTTTCTTTTTAAATCAA
CCATTCCAGGCTCCAAAGTTGTTTTTAAATTTGTCTTATTTGTTGGCGAT
TTTTAGCTTTATTTCTTTAATAAAATTGTTCGACTTTTTTATACATTATT
CGATATTTAATCGATCCCATGGAGAATTTATGTTTACGGTCAATATCAAA
TCATTGCGTATTTAACAGATCGACTAGAGGTCATGATTTAACATGTCATA
ATTTGTCTTATGGTTTGGCAAAGGTTAAGTCGGCTCTGAAGAAGTAACGT
AATCACAATTTCAACTTGATGGATTAGAGAAGTTTCGTTCCATATCGAAG
AGGCTTTAAGTGTGTGTAGTGAGAGTGAAAGTGTATTATTATATTATTGC
TGGTATTTCAAATTGGAATGCCTTGTCGCAATGATAAGAAAGATAAATTA
AAGCTTTAACTGTTTTGGTGCTTCTTTCCAAAGCTCCAAAAATATCTTTC
TGGCCTGATTGTAGTCTGGTGGCAGTGACTTATGAAATAATAGTTTAGAA
ATAGATTATACCATGTATAACATGTTTATCATGACATCTAGTTCATTTGA
ATTAATCATAAAGAGTTCTGGCAAAAGTGAAATAATCGCCAAAAAAAACA
TTTTCAGTTCATTCTTCATCAACTTTATTCATTAAATTTAATTTCTGAAA
TTGTCTATTAGGACTTGGACAGCTTTAACCTTATGTAGGTCTATCTATCT
CAAACACAAATGTTCTTTTTTTTCAGAATGGCTTTGTATAAAGATGAAAT
CTATGTTGCTTGGGATACTGTCGCTGGGAACATCATCAACCATTTATATG
ATATCTTTGTTATCGATGGTACATCGCAGAAAGTTGATATCCATATCTTT
CTACACCAAAGCAAGTTACGTGACCAGAGGCTAGTAGACTGGCCTGAAAA
CTTTATTTTTCATTTCACAAGTACGTCATCGGCTAATGCTTTGCAAACAT
CTGTAATAGCATACGTGTTGGAGAAATTTGAACGTATTTCAAGAGAGCTA
GAGTTGGAGGAGGTCGTTGAGAAAAGTCGTGTTTTCTTTATCCAAGATTC
TGAAAGTCAATTTGAGGAGTTGAAAAGTATGTTGTATCGTATACCGTATA
TTAAAAGCTCTTTTACATTCAAACTATTGTCTTTGACTGAAGATTTTAAT
ACTGAAATGTTGTTTCAAGTATCTTCGTTGAATAAGAGACGATCATTACA
AGTCAGTGGTCGAAGCAGTGTCACCTCTGACGAGACCTTTAATGTCTATG
GTGGTGCTACCACGCCCCGTTCTGTCCGCCATGGGCGTAGGGCGTCTGAT
TTTCCTTCAAGTCCAGCACCGTTGTCTCAAAAAAGTAGTAATTTGTCACC
ACGTGTTTTACAAAATGGGACTGGAACGAACAGTTGTAAGCATTGCGATA
GGCGACGCGGAAGTCAACCGAAATTTGATATGCAAGATAAGAAATTATTT
TGTATGGCTTGTTTTTTGGATGATTCAGGTAGCGATCATGATTTGTGTCG
GATTTGTCAACGCAAGAAAGATTTCACTGTCGAGGATAAGTCTACTATGA
CGATGAAGACAAACTCTAAGAACATGTCAATCCAGTGCGATATACCAGTC
CATGAATACAAAGAGGCTACGACACAGACTAGGGTATATACAAACACTGT
AATTGTACAGACTAGCATCAGTATACCAGTGGATCTACCGGCAGATTTAC
AAAGAAAACTTGATGATTTGATGAAAGAGATTGATGATTATCGTAACCGA
CCCCAAGGATTGCCAGAGTTGAATCTACCACAAGCTGATGACCCATTCCG
TTTAGTAGACGCTCAAATAAATCCAAACACCAACAAATTCGATTGTCCTT
TCTGTGAAGGAAAATCATTCGCCAAAATCAGTATCTTCGAAGTCCACTTA
CGTAATGTCCATAAGAAATGTAATTGTTCATGCGAACGTTACTTCCCAAC
ACGTGAAGATTACTTAGATCATTTTTATTCCGTATTCCCGTTACCGTGTT
TTGAGCAACGTAAATGTCCGGAAAGATTCCGGTCCGTACCATACCAAGCT
ATACATCACGCTAAAGTACATTTCGCTGAAAAACCATACTGCTGTGTAAT
ATGTTTTGATAGTCAGGTCGAACCGAAAAAGAACTATCGCTTTAAGAGTG
TCCGCGCGCTTCAAATGCACGCTAAAGAAATGGGTCACGATGAAGAAGAT
ATGTTCTTAAGAGTTAAGAACACGGATGAGAATAGTCAAATCCCATTAAC
TGGACGTGCAAGTGCAATAAACTTTTCAGGAGATTTTTAATGAATGAATT
TAATGTATGAAATAAAACTATTGTAGAGCATGAGGGTATGAATTTATACT
AACCATTTTCTCGACGACATCAACATATGCAGACACATGATACCAATTGT
AATCCATTTGATAATTATACTCATACATAAAAGACACTCCCTTCTCACAG
ACCCTTCCGACTGGAAAGATTCGCCAAAATATCGTCCCCGGTGGAAAATT
GTCCTCCAATTTTTGCCCCGCTGAAAAAAAA

Coding sequence (CDS) from alignment at sc0000273:185142..191272-

>TCONS_00017694 ID=TCONS_00017694|Name=TCONS_00017694|organism=Clytia hemisphaerica|type=CDS|length=3270bp|location=Sequence derived from alignment at sc0000273:185142..191272- (Clytia hemisphaerica)
AATGGCTTTGTATAAAGATGAAATCTATGTTGCTTGGGATACTGTCGCTG
GGAACATCATCAACCATTTATATGATATCTTTGTTATCGATGGTACATCG
CAGAAAGTTGATATCCATATCTTTCTACACCAAAGCAAGTTACGTGACCA
GAGGCTAGTAGACTGGCCTGAAAACTTTATTTTTCATTTCACAAGTACGT
CATCGGCTAATGCTTTGCAAACATCTGTAATAGCATACGTGTTGGAGAAA
TTTGAACGTATTTCAAGAGAGCTAGAGTTGGAGGAGGTCGTTGAGAAAAG
TCGTGTTTTCTTTATCCAAGATTCTGAAAGTCAATTTGAGGAGTTGAAAA
GTATGTTGTATCGTATACCGTATATTAAAAGCTCTTTTACATTCAAACTA
TTGTCTTTGACTGAAGATTTTAATACTGAAATGTTGTTTCAAGTATCTTC
GTTGAATAAGAGACGATCATTACAAGTCAGTGGTCGAAGCAGTGTCACCT
CTGACGAGACCTTTAATGTCTATGGTGGTGCTACCACGCCCCGTTCTGTC
CGCCATGGGCGTAGGGCGTCTGATTTTCCTTCAAGTCCAGCACCGTTGTC
TCAAAAAAGTAGTAATTTGTCACCACGTGTTTTACAAAATGGGACTGGAA
CGAACAGTTGTAAGCATTGCGATAGGCGACGCGGAAGTCAACCGAAATTT
GATATGCAAGATAAGAAATTATTTTGTATGGCTTGTTTTTTGGATGATTC
AGGTAGCGATCATGATTTGTGTCGGATTTGTCAACGCAAGAAAGATTTCA
CTGTCGAGGATAAGTCTACTATGACGATGAAGACAAACTCTAAGAACATG
TCAATCCAGTGCGATATACCAGTCCATGAATACAAAGAGGCTACGACACA
GACTAGGGTATATACAAACACTGTAATTGTACAGACTAGCATCAGTATAC
CAGTGGATCTACCGGCAGATTTACAAAGAAAACTTGATGATTTGATGAAA
GAGATTGATGATTATCGTAACCGACCCCAAGGATTGCCAGAGTTGAATCT
ACCACAAGCTGATGACCCATTCCGTTTAGTAGACGCTCAAATAAATCCAA
ACACCAACAAATTCGATTGTCCTTTCTGTGAAGGAAAATCATTCGCCAAA
ATCAGTATCTTCGAAGTCCACTTACGTAATGTCCATAAGAAATGTAATTG
TTCATGCGAACGTTACTTCCCAACACGTGAAGATTACTTAGATCATTTTT
ATTCCGTATTCCCGTTACCGTGTTTTGAGCAACGTAAATGTCCGGAAAGA
TTCCGGTCCGTACCATACCAAGCTATACATCACGCTAAAGTACATTTCGC
TGAAAAACCATACTGCTGTGTAATATGTTTTGATAGTCAGGTCGAACCGA
AAAAGAACTATCGCTTTAAGAGTGTCCGCGCGCTTCAAATGCACGCTAAA
GAAATGGGTCACGATGAAGAAGATATGTTCTTAAGAGTTAAGAACACGGA
TGAGAATAGTCAAATCCCATTAACTGGACGTGCAAGTGCAATAAACTTTT
CAGGAGATTTTTAATTAAAAAGCAACAACAACAATATGGTGATGGTGCAA
CGGGATCATAGACACAGATATTATTACTCTAATAAAATGGCTTTGTATAA
AGATGAAATCTATGTTGCTTGGGATACTGTCGCTGGGAACATCATCAACC
ATTTATATGATATCTTTGTTATCGATGGTACATCGCAGAAAGTTGATATC
CATATCTTTCTACACCAAAGCAAGTTACGTGACCAGAGGCTAGTAGACTG
GCCTGAAAACTTTATTTTTCATTTCACAAGTACGTCATCGGCTAATGCTT
TGCAAACATCTGTAATAGCATACGTGTTGGAGAAATTTGAACGTATTTCA
AGAGAGCTAGAGTTGGAGGAGGTCGTTGAGAAAAGTCGTGTTTTCTTTAT
CCAAGATTCTGAAAGTCAATTTGAGGAGTTGAAAAGTATGTTGTATCGTA
TACCGTATATTAAAAGCTCTTTTACATTCAAACTATTGTCTTTGACTGAA
GATTTTAATACTGAAATGTTGTTTCAAGTATCTTCGTTGAATAAGAGACG
ATCATTACAAGTCAGTGGTCGAAGCAGTGTCACCTCTGACGAGACCTTTA
ATGTCTATGGTGGTGCTACCACGCCCCGTTCTGTCCGCCATGGGCGTAGG
GCGTCTGATTTTCCTTCAAGTCCAGCACCGTTGTCTCAAAAAAGTAGTAA
TTTGTCACCACGTGTTTTACAAAATGGGACTGGAACGAACAGTTGTAAGC
ATTGCGATAGGCGACGCGGAAGTCAACCGAAATTTGATATGCAAGATAAG
AAATTATTTTGTATGGCTTGTTTTTTGGATGATTCAGGTAGCGATCATGA
TTTGTGTCGGATTTGTCAACGCAAGAAAGATTTCACTGTCGAGGATAAGT
CTACTATGACGATGAAGACAAACTCTAAGAACATGTCAATCCAGTGCGAT
ATACCAGTCCATGAATACAAAGAGGCTACGACACAGACTAGGGTATATAC
AAACACTGTAATTGTACAGACTAGCATCAGTATACCAGTGGATCTACCGG
CAGATTTACAAAGAAAACTTGATGATTTGATGAAAGAGATTGATGATTAT
CGTAACCGACCCCAAGGATTGCCAGAGTTGAATCTACCACAAGCTGATGA
CCCATTCCGTTTAGTAGACGCTCAAATAAATCCAAACACCAACAAATTCG
ATTGTCCTTTCTGTGAAGGAAAATCATTCGCCAAAATCAGTATCTTCGAA
GTCCACTTACGTAATGTCCATAAGAAATGTAATTGTTCATGCGAACGTTA
CTTCCCAACACGTGAAGATTACTTAGATCATTTTTATTCCGTATTCCCGT
TACCGTGTTTTGAGCAACGTAAATGTCCGGAAAGATTCCGGTCCGTACCA
TACCAAGCTATACATCACGCTAAAGTACATTTCGCTGAAAAACCATACTG
CTGTGTAATATGTTTTGATAGTCAGGTCGAACCGAAAAAGAACTATCGCT
TTAAGAGTGTCCGCGCGCTTCAAATGCACGCTAAAGAAATGGGTCACGAT
GAAGAAGATATGTTCTTAAGAGTTAAGAACACGGATGAGAATAGTCAAAT
CCCATTAACTGGACGTGCAAGTGCAATAAACTTTTCAGGAGATTTTTAAT
TAAAAAGCAACAACAACAATATGGTGATGGTGCAACGGGATCATAGACAC
AGATATTATTACTCTAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009895XLOC_009895Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017694-proteinTCONS_00017694-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017694-exon-sc0000273-1575043694:191200..191272TCONS_00017694-exon-sc0000273-1575043694:191200..191272Clytia hemisphaericaexon
TCONS_00017694-exon-sc0000273-1575043694:185142..186946TCONS_00017694-exon-sc0000273-1575043694:185142..186946Clytia hemisphaericaexon
TCONS_00017694-exon-sc0000273-1510915933:191200..191272TCONS_00017694-exon-sc0000273-1510915933:191200..191272Clytia hemisphaericaexon
TCONS_00017694-exon-sc0000273-1510915933:185142..186946TCONS_00017694-exon-sc0000273-1510915933:185142..186946Clytia hemisphaericaexon
TCONS_00017694-exon-sc0000273-1491911889:191200..191272TCONS_00017694-exon-sc0000273-1491911889:191200..191272Clytia hemisphaericaexon
TCONS_00017694-exon-sc0000273-1491911889:185142..186946TCONS_00017694-exon-sc0000273-1491911889:185142..186946Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000273supercontigsc0000273:185142..191272 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.595193	0.663322	0.433226	0.211922	26.3728	19.5716	30.3626	32.2373	24.3793	36.3881	16.3674	47.0719	0.537217	0.557905	0.120704	0.220207	0.925533	0.91593	0.813475	0.851243	0.637123	0.72178	1.53548	1.5954	0.821613	0.672164	1.36993	0.933207	0.566244	0.841331
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017694 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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