TCONS_00017694-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017694-protein
Unique NameTCONS_00017694-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length544

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017694-protein ID=TCONS_00017694-protein|Name=TCONS_00017694-protein|organism=Clytia hemisphaerica|type=polypeptide|length=544bp
LKSNNNNMVMVQRDHRHRYYYSNKMALYKDEIYVAWDTVAGNIINHLYDI
FVIDGTSQKVDIHIFLHQSKLRDQRLVDWPENFIFHFTSTSSANALQTSV
IAYVLEKFERISRELELEEVVEKSRVFFIQDSESQFEELKSMLYRIPYIK
SSFTFKLLSLTEDFNTEMLFQVSSLNKRRSLQVSGRSSVTSDETFNVYGG
ATTPRSVRHGRRASDFPSSPAPLSQKSSNLSPRVLQNGTGTNSCKHCDRR
RGSQPKFDMQDKKLFCMACFLDDSGSDHDLCRICQRKKDFTVEDKSTMTM
KTNSKNMSIQCDIPVHEYKEATTQTRVYTNTVIVQTSISIPVDLPADLQR
KLDDLMKEIDDYRNRPQGLPELNLPQADDPFRLVDAQINPNTNKFDCPFC
EGKSFAKISIFEVHLRNVHKKCNCSCERYFPTREDYLDHFYSVFPLPCFE
QRKCPERFRSVPYQAIHHAKVHFAEKPYCCVICFDSQVEPKKNYRFKSVR
ALQMHAKEMGHDEEDMFLRVKNTDENSQIPLTGRASAINFSGDF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009895XLOC_009895Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017694TCONS_00017694Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 345..365
NoneNo IPR availableGENE3D2.160.10.10coord: 218..530
e-value: 5.3E-10
score: 38.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..252
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 446..472
e-value: 220.0
score: 1.3
coord: 395..419
e-value: 1.8
score: 17.5
coord: 478..511
e-value: 57.0
score: 6.6

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017694-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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