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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017647 ID=TCONS_00017647|Name=TCONS_00017647|organism=Clytia hemisphaerica|type=transcript|length=1010bp
GAAAAATCAAAGAGTAATCACTTCGTTTTCAAGACCAATGTGAAAGAAAT
GGACATTGGAGAAATGTACGAGTCGTTGTACAACACTGATTTTGTCGAAA
ACCAGTCTAACGAACGTATCGACTTTGAAGATTCACACATGTCAGTCGAA
GACAAAAGGTTTATGTCCATCATGGAAGAAAAGACAACGATTGAGGATGG
TCACTATGTACTTCCATTACCACTCAGAGATGGAGAAAGCAACTTACCAA
ACAACAGACGCATTGCAGAAAGACGATTAGCAAGTCTCAAACGCAAACTT
GAACGCAACCCTACCTTTTTCGACCACTACATGACGTTTATGGATACCAT
ATTGAAGAATGGTCATGCAAGAATCGCCAAACCATTACCAGATGACAAGC
AAGTTTGGTATCTTCCTCACCATGGAGTGTATCATCCACGAAAACCAGGG
AAAGTCTGGGTCGTCCTGGATTGTGGAGCTGAGTTCCAGACTCAATCACT
GAATAAACAATTGTTAACCGGGCCAGACTTGACCAATCAAATTGTTGGAG
TTCTGTCACGTTTTCGTCAAGGTCGGATTGGAGTAATGGCAGACATTCAA
GCTATGTTTTACCAAGTCTTTGTTCCTGAACATCAACGATCCCTTCTTCG
CTTCCTTTGGTGGAAAGACAACGATCTAACTACAACACCTATCGACTACG
AAATGAACGTCCACGTCTTTGGTGCAGGATCATCACCAAGCTGCTCAAGT
TATGCACTCAGAAGAACAGCCATCGACAATCAAGAAGATTTCCCCGACAA
GATACGAAACATTCTTTTCAACAATTTCTACGTCGATGATATGTTGAAAT
CAGAAGATGACGAACAAGAAACCATTGAAATGATACAGGGTGTCAAATCG
CTATGTAAACGAGGAGGATTCAACCTCGTAAAGTTCGTAACCAACAGTCA
AACCGTGCTCAATTCTCTACCAAAAGAGGATCTTGGATCGTCACTCAAGG
ATGCATCCCT Run BLAST on NCBI protein sequence of TCONS_00017647-protein >TCONS_00017647-protein ID=TCONS_00017647-protein|Name=TCONS_00017647-protein|organism=Clytia hemisphaerica|type=polypeptide|length=336bp
EKSKSNHFVFKTNVKEMDIGEMYESLYNTDFVENQSNERIDFEDSHMSVE
DKRFMSIMEEKTTIEDGHYVLPLPLRDGESNLPNNRRIAERRLASLKRKL
ERNPTFFDHYMTFMDTILKNGHARIAKPLPDDKQVWYLPHHGVYHPRKPG
KVWVVLDCGAEFQTQSLNKQLLTGPDLTNQIVGVLSRFRQGRIGVMADIQ
AMFYQVFVPEHQRSLLRFLWWKDNDLTTTPIDYEMNVHVFGAGSSPSCSS
YALRRTAIDNQEDFPDKIRNILFNNFYVDDMLKSEDDEQETIEMIQGVKS
LCKRGGFNLVKFVTNSQTVLNSLPKEDLGSSLKDAS Run BLAST on NCBI transcript from alignment at sc0000271:96246..97255 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017647 ID=TCONS_00017647|Name=TCONS_00017647|organism=Clytia hemisphaerica|type=transcript|length=1010bp|location=Sequence derived from alignment at sc0000271:96246..97255 (Clytia hemisphaerica)
AGGGATGCATCCTTGAGTGACGATCCAAGATCCTCTTTTGGTAGAGAATT
GAGCACGGTTTGACTGTTGGTTACGAACTTTACGAGGTTGAATCCTCCTC
GTTTACATAGCGATTTGACACCCTGTATCATTTCAATGGTTTCTTGTTCG
TCATCTTCTGATTTCAACATATCATCGACGTAGAAATTGTTGAAAAGAAT
GTTTCGTATCTTGTCGGGGAAATCTTCTTGATTGTCGATGGCTGTTCTTC
TGAGTGCATAACTTGAGCAGCTTGGTGATGATCCTGCACCAAAGACGTGG
ACGTTCATTTCGTAGTCGATAGGTGTTGTAGTTAGATCGTTGTCTTTCCA
CCAAAGGAAGCGAAGAAGGGATCGTTGATGTTCAGGAACAAAGACTTGGT
AAAACATAGCTTGAATGTCTGCCATTACTCCAATCCGACCTTGACGAAAA
CGTGACAGAACTCCAACAATTTGATTGGTCAAGTCTGGCCCGGTTAACAA
TTGTTTATTCAGTGATTGAGTCTGGAACTCAGCTCCACAATCCAGGACGA
CCCAGACTTTCCCTGGTTTTCGTGGATGATACACTCCATGGTGAGGAAGA
TACCAAACTTGCTTGTCATCTGGTAATGGTTTGGCGATTCTTGCATGACC
ATTCTTCAATATGGTATCCATAAACGTCATGTAGTGGTCGAAAAAGGTAG
GGTTGCGTTCAAGTTTGCGTTTGAGACTTGCTAATCGTCTTTCTGCAATG
CGTCTGTTGTTTGGTAAGTTGCTTTCTCCATCTCTGAGTGGTAATGGAAG
TACATAGTGACCATCCTCAATCGTTGTCTTTTCTTCCATGATGGACATAA
ACCTTTTGTCTTCGACTGACATGTGTGAATCTTCAAAGTCGATACGTTCG
TTAGACTGGTTTTCGACAAAATCAGTGTTGTACAACGACTCGTACATTTC
TCCAATGTCCATTTCTTTCACATTGGTCTTGAAAACGAAGTGATTACTCT
TTGATTTTTC Coding sequence (CDS) from alignment at sc0000271:96246..97255 >TCONS_00017647 ID=TCONS_00017647|Name=TCONS_00017647|organism=Clytia hemisphaerica|type=CDS|length=1008bp|location=Sequence derived from alignment at sc0000271:96246..97255 (Clytia hemisphaerica)
GGATGCATCCTTGAGTGACGATCCAAGATCCTCTTTTGGTAGAGAATTGA
GCACGGTTTGACTGTTGGTTACGAACTTTACGAGGTTGAATCCTCCTCGT
TTACATAGCGATTTGACACCCTGTATCATTTCAATGGTTTCTTGTTCGTC
ATCTTCTGATTTCAACATATCATCGACGTAGAAATTGTTGAAAAGAATGT
TTCGTATCTTGTCGGGGAAATCTTCTTGATTGTCGATGGCTGTTCTTCTG
AGTGCATAACTTGAGCAGCTTGGTGATGATCCTGCACCAAAGACGTGGAC
GTTCATTTCGTAGTCGATAGGTGTTGTAGTTAGATCGTTGTCTTTCCACC
AAAGGAAGCGAAGAAGGGATCGTTGATGTTCAGGAACAAAGACTTGGTAA
AACATAGCTTGAATGTCTGCCATTACTCCAATCCGACCTTGACGAAAACG
TGACAGAACTCCAACAATTTGATTGGTCAAGTCTGGCCCGGTTAACAATT
GTTTATTCAGTGATTGAGTCTGGAACTCAGCTCCACAATCCAGGACGACC
CAGACTTTCCCTGGTTTTCGTGGATGATACACTCCATGGTGAGGAAGATA
CCAAACTTGCTTGTCATCTGGTAATGGTTTGGCGATTCTTGCATGACCAT
TCTTCAATATGGTATCCATAAACGTCATGTAGTGGTCGAAAAAGGTAGGG
TTGCGTTCAAGTTTGCGTTTGAGACTTGCTAATCGTCTTTCTGCAATGCG
TCTGTTGTTTGGTAAGTTGCTTTCTCCATCTCTGAGTGGTAATGGAAGTA
CATAGTGACCATCCTCAATCGTTGTCTTTTCTTCCATGATGGACATAAAC
CTTTTGTCTTCGACTGACATGTGTGAATCTTCAAAGTCGATACGTTCGTT
AGACTGGTTTTCGACAAAATCAGTGTTGTACAACGACTCGTACATTTCTC
CAATGTCCATTTCTTTCACATTGGTCTTGAAAACGAAGTGATTACTCTTT
GATTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017647-exon-sc0000271-1491911889:96246..97255 | TCONS_00017647-exon-sc0000271-1491911889:96246..97255 | Clytia hemisphaerica | exon |
| TCONS_00017647-exon-sc0000271-1510915933:96246..97255 | TCONS_00017647-exon-sc0000271-1510915933:96246..97255 | Clytia hemisphaerica | exon |
| TCONS_00017647-exon-sc0000271-1575043694:96246..97255 | TCONS_00017647-exon-sc0000271-1575043694:96246..97255 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000271 | supercontig | sc0000271:96246..97255 . |
Blast
The following BLAST results are available for this feature:
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