TCONS_00017582 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017582
Unique NameTCONS_00017582
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1222

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017582 ID=TCONS_00017582|Name=TCONS_00017582|organism=Clytia hemisphaerica|type=transcript|length=1222bp
AAAAGGGTGGAGTTCAAGTGTCTCCTCATCAGTTCAAACTCGGCATcaaa
tttggaagaaaaaacaaaagaattaccAAGGAAGAAAGGTTTCAGGGAAG
ATTCTGTCAAGATACAGCATGAAGTTACAGAGCATGTTGGCCATTGCCTT
TACGTTGGTTGTTTTTGCAGAGGCTTATAATTTCAATCATGATATGGGCG
CTAAATTAGATGGGCGTATTATCCACGTGGAGTCGTTGAGATATAGAGGT
CATTGGTTGAAATCATCGTTTCACAACGGTGGTAAATGGATTGCTGTTTA
TGGATTGGCTCAAAGAGATACCTATTATACACAATGGTCGCAATTTAAGG
TCAAACACGTGGGAGGTGGTAAGGTGACGATCGAATCAATGACCTATCCA
CACCACTACTTTGACTCTCATTACTCTGGATGGGTTGGGACTACTTACTC
CACATACCCTGATAATCAGGCTTGGGCTCAATGGAAAATTTATTGCACCA
GTCAATCAATGGATGTTTGTCGTTTTGAATCGATGAGATATCGAGGACAT
TACTTCGACTCCAGTCACACCGGAGGTCTTGGAGTTGCAAGATATGGCAA
TGGTTGGTCAAGGTTCCGAATTTTAGCACCAAACGCTGAAGATTACTATG
TGACAATCCTTTCTACAGAGAATCACAGCAGTGCTTCATCCAAGAAAACA
TTAACAGTTGAAGAAGGGGTGATTGACTCAACAACCACCGAAAATACCAT
CACCACCTCTGTCTCTGTTGAAGTTCAAAAAGCTTTCGTCACTGCATCAG
CCTCCGTTACTCATGAATGGAAGCAAACTGAATCGAAGACATTCGAGAAA
CGAACCTCATTCACATACGAAGTTCCCATCCCTGCTCGTTCAAAGATCGA
GGTCAAACAACTAACCGGTGAATACGGTCCTTTCCGAATCAAAGTCAACA
AATTCATCATTAAAGAAACGAAACTCGATGGACGCAAACGTGGACTTATC
GAAGAATTTGACGGATACTTGATTGACTACTAAAAAGGAAATTCTCCACC
CAATTTGATATGAAATCGTAAACTCATTTCAGAGGAGCTGTATTTCGAAT
TATATATCTTTCTTGACTTGTAATATTTGTTAGCGTTCTACTTTGCTAAA
ATATGACTTTTAGATAATGGACATGCTCATTTATTTGATTGACCTTTCCC
TGTTTTTAAGAGTTTCCATCAC
Run BLAST on NCBI

protein sequence of TCONS_00017582-protein

>TCONS_00017582-protein ID=TCONS_00017582-protein|Name=TCONS_00017582-protein|organism=Clytia hemisphaerica|type=polypeptide|length=343bp
KGWSSSVSSSVQTRHQIWKKKQKNYQGRKVSGKILSRYSMKLQSMLAIAF
TLVVFAEAYNFNHDMGAKLDGRIIHVESLRYRGHWLKSSFHNGGKWIAVY
GLAQRDTYYTQWSQFKVKHVGGGKVTIESMTYPHHYFDSHYSGWVGTTYS
TYPDNQAWAQWKIYCTSQSMDVCRFESMRYRGHYFDSSHTGGLGVARYGN
GWSRFRILAPNAEDYYVTILSTENHSSASSKKTLTVEEGVIDSTTTENTI
TTSVSVEVQKAFVTASASVTHEWKQTESKTFEKRTSFTYEVPIPARSKIE
VKQLTGEYGPFRIKVNKFIIKETKLDGRKRGLIEEFDGYLIDY
Run BLAST on NCBI

transcript from alignment at sc0000271:47962..53406+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017582 ID=TCONS_00017582|Name=TCONS_00017582|organism=Clytia hemisphaerica|type=transcript|length=5445bp|location=Sequence derived from alignment at sc0000271:47962..53406+ (Clytia hemisphaerica)
AAAAGGGTGGAGTTCAAGTGTCTCCTCATCAGTTCAAACTCGGCATcaaa
tttggaagaaaaaacaaaagaattaccAAGGAAGAAAGGTTTCAGGTACG
TTTTAAGCGTCGTCTGACAAATTGAAATTCAGTTtaaaaaacctaaattt
aacgAAATACTACAGGCACTTacgaattcttttttttaaattcacttgta
aaatgttttcaaatttataaaatCCACGCAAGTGGTCGCATCTTAAAATT
ATGAAAGCTACCTTAGGGAAACTAATTGTAACGGGatctgattttaaaaa
taaaaggtaCCTGGATTTCCTAGGTAGttgcaatttttattttttactac
GATAACTCTGGTTTAGACTGTGCTCCTCCTTGATGTTTATGGAGGGTGAA
AATTTCACTGTCATCGTCAAACATTTAATCGCCCGTGCTATTTATGTTTA
TGTGTTTTTTAATTAGTATTCTCAGTAGACTTTTAGTTTTCACGTGTCCC
TCGCATCAGTgtctctttgttttgattttctttagtATTCTCAAATTGCT
TTTCAATATATCATCCGTCATTTCTCTAGAGAAATTAGGATATGTTTATT
AACTATAAGCTTAGTTCAACGTTGACAGACGAGATTGTCTCGTGTGTGAG
AAAGAGGTGGATGTGTTTTATTTAAAGTagcattttacattttttgtttt
ccgACTTCTTGTTGGTTTAATTCGATAATTTTTAATCTCTGGAATGGTAT
TTAACAGATTTCAGTCCTTTTTGACGACTGACCATATATTCATAAATTGG
ATAACGAACTATAAATATCTTTCAGGGAAGATTCTGTCAAGATACAGCAT
GAAGTTACAGAGCATGTTGGCCATTGCCTTTACGTTGTAAGTAGATATTC
AGTAAAAATGTTTTCCTGTTTATTCACCGGATTTTAGACTCTACTGTAAT
CCCCAAAAACTTTCAGACACTATAGAGACTTTATGTTGTATTTTCGCCGT
CTAAGTCAGGGAGGAATATTTCACTATTTTTTAATCCATCCAAAAACGTT
TGGCTTTCTGTTCCTTTAAGCCAACATTATTTGAAGGCACTGCTCTTGAT
TTTCTCTGTGCAGGGTTGTTTTTGCAGAGGCTTATAATTTCAATCATGAT
ATGGGCGCTAAATTAGATGGGCGTATTATCCACGTGGAGTCGTTGAGATA
TAGAGGTCATTGGTTGAAATCATCGTTTCACAACGGTGGTAAATGGATTG
CTGTTTATGGATTGGCTCAAAGAGATACCTATTATACACAATGGTCGCAA
TTTAAGGTGAGCAACTATTAATTTTCACATGTGTTTTCTCAGAAAGATGC
CCCCCCCCCGACAATGTCATCaaacttttcgaaatttaatCTAGTTACAT
TGTGTCATCAATAATGTTATGACCTATTTTTGTGGTCTTTTCGCAAAAAT
ACGGGTGAAAGCAATTAAAGTCTGTCACAAAAATTGGAAGTTTGTGCTTT
TGAGCATTAACATAATGCACTTAGAATTATTTTTCCAACGAGGAATTTCT
TTGAATTCCATCTTTTTTTCAGTTGAGagtaatctttaaaaaagattctt
tgaaaCTGACTTGACGTTATAGTTTCCAGAGTGGAAAAACATACACTCTT
TTTACTTTATACGCATCgcacttataagcatacgcAGGCTCAGATGAGGC
AAAAATATAAGCGTATGCTAAgccttcattttcagattttgcctgttttt
ggctgaattttatgtttttcgGTATTTCTCTAAAACATTGCCTATGATTT
AAGCAtctttgaaagctttttttACAGCCTTCTCAAGCCTTAAGCATCTC
CAAacctttcaaatttttgtatgcttataaaaatacatTTATCCTTCGTG
TTCAGTCATTTGGTTTGTTCGACAGGCTAATGTGTGTTCCTTAAAATTAT
AATTGActcttaacatttttgaaacGACCCATTTTATCAAAGTCACCTTT
CGAAATTTACGATATTCATGCCGTATTTTTCACTAGTTTTgttgttaaaa
aattcaaaaatagtgGTAAAAACCTGGTCTTTTGGGGTGCTTCCCTCTGA
AGCATTATGTCATAAATAACACGACATTATTTTCATACAGGTCAAACACG
TGGGAGGTGGTAAGGTGACGATCGAATCAATGACCTATCCACACCACTAC
TTTGACTCTCATTACTCTGGATGGGTTGGGACTACTTACTCCACATACCC
TGATAATCAGGTTTGTTAGTGTTTTGACTAAATAACATGCACgtcccgaa
tagtagggggTCAGAATAAAAGGAGGgtccaaatatttttttaaatctta
taaACAGAGGGAGNAGCATTAACATAATGCACTTAGAATTATTTTTCCAA
CGAGGAATTTCTTTGAATTCCATCTTTTTTTCAGTTGAGagtaatcttta
aaaaagtacTAATTCTTTGAAACAGACATGACGTTATAGTTTCCAGAGTG
GAAAAACATACACTCTTTTTACTTTATACGCATCgcacttataagcatac
gcAGGCTCAGATGAGGCAAAAATTTAAGCGTATGCTAAgccttcattttc
agattttgcttgtttttggctgaattttatgtttttcgGTATTTCTCTAA
AACATTGCCTATGATTTAAGCAtctttgaaagctttttttACAGCCTTCT
CAAGCCTTAAGCATCTCCAAacctttcaaatttttgtatgcttataaaaa
tacatTTATCCTTCGTGTTCAGTCATTTGGTTTGTTCGACAGGCTAATGT
GTGTTCCTTAAAATTATAATTGActcttaacatttttgaaacGACCCATT
TTATCAAAGTCACCTTTCGAAATTTACGATATTCATGCCGTATTTTTCAC
TAGTTTTgttgttaaaaaattcaaaaatagtgGTAAAAACCTGGTCTTTT
GGGGTGCTTCCCTCTGAAGCATTATGTCATAAATAACACGACATTATTTT
CATACAGGTCAAACACGTGGGAGGTGGTAAGGTGACGATCGAATCAATGA
CCTATCCACACCACTACTTTGACTCTCATTACTCTGGATGGGTTGGGACT
ACTTACTCCACATACCCTGATAATCAGGTTTGTTAGTGTTTTGACTAAAT
AACATGCACGTCTCGAATAGTAGGGGGTCAGAATAAAAGGAGGgtccaaa
tatttttttaaatcttataaACAGAGGGAGTTCGAAATTACACCCCAAAA
ActccaaaataaggtaattataaGCTAAAAACAGGCTTAGAGCAATTTAG
CCTGTATTAACcgaaagtattttcaaaaatatataaacggggacctaaaa
attttattgaaagttAATAACTAGGTGGGGACGTTTGTTCGGGACCTTAG
AGCAATGTCATTACTCTGACTAGTACATTCCCGTGTTGTTGATACCCCTG
TCTCAGCCATCTTACAAAAATTTGATGCCAGTTGGAAGTTAAATACAGAC
GACGATAGAAAAGCATGTTTTAGTAAGGGGAATCTTCAGCTTTGTTTATA
CTACCGTGTAAATCATTGTATTTAAcatcttaaaaattattttgtatatA
ATGAAAGGCTTGGGCTCAATGGAAAATTTATTGCACCAGTCAATCAATGG
ATGTTTGTCGTTTTGAATCGATGAGATATCGAGGACATTACTTCGACTCC
AGTCACACCGGAGGTCTTGGAGTTGCAAGATATGGCAATGGTTGGTCAAG
GTTCCGAATTTTAGCACCAAACGCTGAAGATTACTATGTGTGAGTTCTAG
TTCTTCTGTTTTATTCTCCTCAGCTTGGAAATATTTACTTACATAGCACC
TCTAACCTTTCTCCCACTCCCATGTAAAGTGAGCAAAAATTTTAAGCAGT
ATCAGAGGCACGCCTCCttttctatatcataaaaacCAACTATGTTCACT
TAAAAGTCCTATCTATACcgtttttgagagctttcgattgGTATAAGTGG
TTTCGGGTTTTATTGACCTTGAAATTTCTTCAAATGCctgtgacgtcagt
ttttgGGTCCTAAAAAAATTCCCAGACGTAAGCAAACAACCCCCTTCGCG
GAAATCCCTTTAGATTTCCATACATTGAAATGGACCAGGTTTGGTTGCGT
AGCATAAAAGTTGGCACGGGTCCTAAGGGTTTGCCCCCTATTACCATAAG
GACAAACAAACAGACTGCGTTTGTTTCAGATGATGAATATCCGGCTGGTT
TTTTGTACTGCTCAAAATCATAACAATAGTTTTATCCCACGTTTGAGAAT
CTCCAAGATAACCGCGTTCAGCTACAATACTACAAtatataaaacaattt
ttttttccttcgcAGGACAATCCTTTCTACAGAGAATCACAGCAGTGCTT
CATCCAAGAAAACATTAACAGTTGAAGAAGGGGTGATTGACTCAACAACC
ACCGAAAATACCATCACCACCTCTGTCTCTGTTGAAGTTCAAAAAGCTTT
CGTCACTGCATCAGCCTCCGTTACTCATGAATGGAAGGTGTGCTAAACGT
TTTTCACTGACCTTTTTTATAAAAGTCTAATTCCGGCCTAGGAAAATCTT
tcaatcggattttttttttaaaaatgtaactACTGCATAATAGCGGTGCA
ACGCTTCGAAAGCGGTAGATCTACTTTTCTATGCGAAATTGCGATGTTGC
GCCATTTGATGTTTTAACACTCCAAtgggcttctttacgggtacctcTTT
CATAAAAATTCCGACCAAAGATGGCagaatataatttgtataaagGTTGG
TGGATTTTCCCTATCAAGGTCTATTCATAAACTCTATTTTAGCCCTAATG
TTATTTCCTCTACCTGGATCTCAAATCTCAAAGTTTATACAAACTGGttc
cttgaaaaataaaagattattCGATTGGCCTTTAAATAAAGTGGCCTGGA
TGTTTTAACCTTTAATCTTTTAAGGATTGGAAATTCAGATATCTACTTTT
TTAGGAGTTTAAGGGTTAATTCCACAACCTTTTCTTCATTTAACAGCAAA
CTGAATCGAAGACATTCGAGAAACGAACCTCATTCACATACGAAGTTCCC
ATCCCTGCTCGTTCAAAGATCGAGGTCAAACAACTAACCGGTGAATACGG
TCCTTTCCGAATCAAAGTCAACAAATTCATCATTAAAGAAACGAAACTCG
ATGGACGCAAACGTGGACTTATCGAAGAATTTGACGGATACTTGATTGAC
TACTAAAAAGGAAATTCTCCACCCAATTTGATATGAAATCGTAAACTCAT
TTCAGAGGAGCTGTATTTCGAATTATATATCTTTCTTGACTTGTAATATT
TGTTAGCGTTCTACTTTGCTAAAATATGACTTTTAGATAATGGACATGCT
CATTTATTTGATTGACCTTTCCCTGTTTTTAAGAGTTTCCATCAC

Coding sequence (CDS) from alignment at sc0000271:47962..53406+

>TCONS_00017582 ID=TCONS_00017582|Name=TCONS_00017582|organism=Clytia hemisphaerica|type=CDS|length=8256bp|location=Sequence derived from alignment at sc0000271:47962..53406+ (Clytia hemisphaerica)
AAAGGGTGGAGTTCAAGTGTCTCCTCATCAGTTCAAACTCGGCATcaaat
ttggaagaaaaaacaaaagaattaccAAGGAAGAAAGGTTTCAGGGAAGA
TTCTGTCAAGATACAGCATGAAGTTACAGAGCATGTTGGCCATTGCCTTT
ACGTTGGTTGTTTTTGCAGAGGCTTATAATTTCAATCATGATATGGGCGC
TAAATTAGATGGGCGTATTATCCACGTGGAGTCGTTGAGATATAGAGGTC
ATTGGTTGAAATCATCGTTTCACAACGGTGGTAAATGGATTGCTGTTTAT
GGATTGGCTCAAAGAGATACCTATTATACACAATGGTCGCAATTTAAGGT
CAAACACGTGGGAGGTGGTAAGGTGACGATCGAATCAATGACCTATCCAC
ACCACTACTTTGACTCTCATTACTCTGGATGGGTTGGGACTACTTACTCC
ACATACCCTGATAATCAGGCTTGGGCTCAATGGAAAATTTATTGCACCAG
TCAATCAATGGATGTTTGTCGTTTTGAATCGATGAGATATCGAGGACATT
ACTTCGACTCCAGTCACACCGGAGGTCTTGGAGTTGCAAGATATGGCAAT
GGTTGGTCAAGGTTCCGAATTTTAGCACCAAACGCTGAAGATTACTATGT
GACAATCCTTTCTACAGAGAATCACAGCAGTGCTTCATCCAAGAAAACAT
TAACAGTTGAAGAAGGGGTGATTGACTCAACAACCACCGAAAATACCATC
ACCACCTCTGTCTCTGTTGAAGTTCAAAAAGCTTTCGTCACTGCATCAGC
CTCCGTTACTCATGAATGGAAGCAAACTGAATCGAAGACATTCGAGAAAC
GAACCTCATTCACATACGAAGTTCCCATCCCTGCTCGTTCAAAGATCGAG
GTCAAACAACTAACCGGTGAATACGGTCCTTTCCGAATCAAAGTCAACAA
ATTCATCATTAAAGAAACGAAACTCGATGGACGCAAACGTGGACTTATCG
AAGAATTTGACGGATACTTGATTGACTACTAAAAAGGGTGGAGTTCAAGT
GTCTCCTCATCAGTTCAAACTCGGCATcaaatttggaagaaaaaacaaaa
gaattaccAAGGAAGAAAGGTTTCAGGGAAGATTCTGTCAAGATACAGCA
TGAAGTTACAGAGCATGTTGGCCATTGCCTTTACGTTGGTTGTTTTTGCA
GAGGCTTATAATTTCAATCATGATATGGGCGCTAAATTAGATGGGCGTAT
TATCCACGTGGAGTCGTTGAGATATAGAGGTCATTGGTTGAAATCATCGT
TTCACAACGGTGGTAAATGGATTGCTGTTTATGGATTGGCTCAAAGAGAT
ACCTATTATACACAATGGTCGCAATTTAAGGTCAAACACGTGGGAGGTGG
TAAGGTGACGATCGAATCAATGACCTATCCACACCACTACTTTGACTCTC
ATTACTCTGGATGGGTTGGGACTACTTACTCCACATACCCTGATAATCAG
GCTTGGGCTCAATGGAAAATTTATTGCACCAGTCAATCAATGGATGTTTG
TCGTTTTGAATCGATGAGATATCGAGGACATTACTTCGACTCCAGTCACA
CCGGAGGTCTTGGAGTTGCAAGATATGGCAATGGTTGGTCAAGGTTCCGA
ATTTTAGCACCAAACGCTGAAGATTACTATGTGACAATCCTTTCTACAGA
GAATCACAGCAGTGCTTCATCCAAGAAAACATTAACAGTTGAAGAAGGGG
TGATTGACTCAACAACCACCGAAAATACCATCACCACCTCTGTCTCTGTT
GAAGTTCAAAAAGCTTTCGTCACTGCATCAGCCTCCGTTACTCATGAATG
GAAGCAAACTGAATCGAAGACATTCGAGAAACGAACCTCATTCACATACG
AAGTTCCCATCCCTGCTCGTTCAAAGATCGAGGTCAAACAACTAACCGGT
GAATACGGTCCTTTCCGAATCAAAGTCAACAAATTCATCATTAAAGAAAC
GAAACTCGATGGACGCAAACGTGGACTTATCGAAGAATTTGACGGATACT
TGATTGACTACTAAAAAGGGTGGAGTTCAAGTGTCTCCTCATCAGTTCAA
ACTCGGCATcaaatttggaagaaaaaacaaaagaattaccAAGGAAGAAA
GGTTTCAGGGAAGATTCTGTCAAGATACAGCATGAAGTTACAGAGCATGT
TGGCCATTGCCTTTACGTTGGTTGTTTTTGCAGAGGCTTATAATTTCAAT
CATGATATGGGCGCTAAATTAGATGGGCGTATTATCCACGTGGAGTCGTT
GAGATATAGAGGTCATTGGTTGAAATCATCGTTTCACAACGGTGGTAAAT
GGATTGCTGTTTATGGATTGGCTCAAAGAGATACCTATTATACACAATGG
TCGCAATTTAAGGTCAAACACGTGGGAGGTGGTAAGGTGACGATCGAATC
AATGACCTATCCACACCACTACTTTGACTCTCATTACTCTGGATGGGTTG
GGACTACTTACTCCACATACCCTGATAATCAGGCTTGGGCTCAATGGAAA
ATTTATTGCACCAGTCAATCAATGGATGTTTGTCGTTTTGAATCGATGAG
ATATCGAGGACATTACTTCGACTCCAGTCACACCGGAGGTCTTGGAGTTG
CAAGATATGGCAATGGTTGGTCAAGGTTCCGAATTTTAGCACCAAACGCT
GAAGATTACTATGTGACAATCCTTTCTACAGAGAATCACAGCAGTGCTTC
ATCCAAGAAAACATTAACAGTTGAAGAAGGGGTGATTGACTCAACAACCA
CCGAAAATACCATCACCACCTCTGTCTCTGTTGAAGTTCAAAAAGCTTTC
GTCACTGCATCAGCCTCCGTTACTCATGAATGGAAGCAAACTGAATCGAA
GACATTCGAGAAACGAACCTCATTCACATACGAAGTTCCCATCCCTGCTC
GTTCAAAGATCGAGGTCAAACAACTAACCGGTGAATACGGTCCTTTCCGA
ATCAAAGTCAACAAATTCATCATTAAAGAAACGAAACTCGATGGACGCAA
ACGTGGACTTATCGAAGAATTTGACGGATACTTGATTGACTACTAAAAAG
GGTGGAGTTCAAGTGTCTCCTCATCAGTTCAAACTCGGCATcaaatttgg
aagaaaaaacaaaagaattaccAAGGAAGAAAGGTTTCAGGGAAGATTCT
GTCAAGATACAGCATGAAGTTACAGAGCATGTTGGCCATTGCCTTTACGT
TGGTTGTTTTTGCAGAGGCTTATAATTTCAATCATGATATGGGCGCTAAA
TTAGATGGGCGTATTATCCACGTGGAGTCGTTGAGATATAGAGGTCATTG
GTTGAAATCATCGTTTCACAACGGTGGTAAATGGATTGCTGTTTATGGAT
TGGCTCAAAGAGATACCTATTATACACAATGGTCGCAATTTAAGGTCAAA
CACGTGGGAGGTGGTAAGGTGACGATCGAATCAATGACCTATCCACACCA
CTACTTTGACTCTCATTACTCTGGATGGGTTGGGACTACTTACTCCACAT
ACCCTGATAATCAGGCTTGGGCTCAATGGAAAATTTATTGCACCAGTCAA
TCAATGGATGTTTGTCGTTTTGAATCGATGAGATATCGAGGACATTACTT
CGACTCCAGTCACACCGGAGGTCTTGGAGTTGCAAGATATGGCAATGGTT
GGTCAAGGTTCCGAATTTTAGCACCAAACGCTGAAGATTACTATGTGACA
ATCCTTTCTACAGAGAATCACAGCAGTGCTTCATCCAAGAAAACATTAAC
AGTTGAAGAAGGGGTGATTGACTCAACAACCACCGAAAATACCATCACCA
CCTCTGTCTCTGTTGAAGTTCAAAAAGCTTTCGTCACTGCATCAGCCTCC
GTTACTCATGAATGGAAGCAAACTGAATCGAAGACATTCGAGAAACGAAC
CTCATTCACATACGAAGTTCCCATCCCTGCTCGTTCAAAGATCGAGGTCA
AACAACTAACCGGTGAATACGGTCCTTTCCGAATCAAAGTCAACAAATTC
ATCATTAAAGAAACGAAACTCGATGGACGCAAACGTGGACTTATCGAAGA
ATTTGACGGATACTTGATTGACTACTAAAAAGGGTGGAGTTCAAGTGTCT
CCTCATCAGTTCAAACTCGGCATcaaatttggaagaaaaaacaaaagaat
taccAAGGAAGAAAGGTTTCAGGGAAGATTCTGTCAAGATACAGCATGAA
GTTACAGAGCATGTTGGCCATTGCCTTTACGTTGGTTGTTTTTGCAGAGG
CTTATAATTTCAATCATGATATGGGCGCTAAATTAGATGGGCGTATTATC
CACGTGGAGTCGTTGAGATATAGAGGTCATTGGTTGAAATCATCGTTTCA
CAACGGTGGTAAATGGATTGCTGTTTATGGATTGGCTCAAAGAGATACCT
ATTATACACAATGGTCGCAATTTAAGGTCAAACACGTGGGAGGTGGTAAG
GTGACGATCGAATCAATGACCTATCCACACCACTACTTTGACTCTCATTA
CTCTGGATGGGTTGGGACTACTTACTCCACATACCCTGATAATCAGGCTT
GGGCTCAATGGAAAATTTATTGCACCAGTCAATCAATGGATGTTTGTCGT
TTTGAATCGATGAGATATCGAGGACATTACTTCGACTCCAGTCACACCGG
AGGTCTTGGAGTTGCAAGATATGGCAATGGTTGGTCAAGGTTCCGAATTT
TAGCACCAAACGCTGAAGATTACTATGTGACAATCCTTTCTACAGAGAAT
CACAGCAGTGCTTCATCCAAGAAAACATTAACAGTTGAAGAAGGGGTGAT
TGACTCAACAACCACCGAAAATACCATCACCACCTCTGTCTCTGTTGAAG
TTCAAAAAGCTTTCGTCACTGCATCAGCCTCCGTTACTCATGAATGGAAG
CAAACTGAATCGAAGACATTCGAGAAACGAACCTCATTCACATACGAAGT
TCCCATCCCTGCTCGTTCAAAGATCGAGGTCAAACAACTAACCGGTGAAT
ACGGTCCTTTCCGAATCAAAGTCAACAAATTCATCATTAAAGAAACGAAA
CTCGATGGACGCAAACGTGGACTTATCGAAGAATTTGACGGATACTTGAT
TGACTACTAAAAAGGGTGGAGTTCAAGTGTCTCCTCATCAGTTCAAACTC
GGCATcaaatttggaagaaaaaacaaaagaattaccAAGGAAGAAAGGTT
TCAGGGAAGATTCTGTCAAGATACAGCATGAAGTTACAGAGCATGTTGGC
CATTGCCTTTACGTTGGTTGTTTTTGCAGAGGCTTATAATTTCAATCATG
ATATGGGCGCTAAATTAGATGGGCGTATTATCCACGTGGAGTCGTTGAGA
TATAGAGGTCATTGGTTGAAATCATCGTTTCACAACGGTGGTAAATGGAT
TGCTGTTTATGGATTGGCTCAAAGAGATACCTATTATACACAATGGTCGC
AATTTAAGGTCAAACACGTGGGAGGTGGTAAGGTGACGATCGAATCAATG
ACCTATCCACACCACTACTTTGACTCTCATTACTCTGGATGGGTTGGGAC
TACTTACTCCACATACCCTGATAATCAGGCTTGGGCTCAATGGAAAATTT
ATTGCACCAGTCAATCAATGGATGTTTGTCGTTTTGAATCGATGAGATAT
CGAGGACATTACTTCGACTCCAGTCACACCGGAGGTCTTGGAGTTGCAAG
ATATGGCAATGGTTGGTCAAGGTTCCGAATTTTAGCACCAAACGCTGAAG
ATTACTATGTGACAATCCTTTCTACAGAGAATCACAGCAGTGCTTCATCC
AAGAAAACATTAACAGTTGAAGAAGGGGTGATTGACTCAACAACCACCGA
AAATACCATCACCACCTCTGTCTCTGTTGAAGTTCAAAAAGCTTTCGTCA
CTGCATCAGCCTCCGTTACTCATGAATGGAAGCAAACTGAATCGAAGACA
TTCGAGAAACGAACCTCATTCACATACGAAGTTCCCATCCCTGCTCGTTC
AAAGATCGAGGTCAAACAACTAACCGGTGAATACGGTCCTTTCCGAATCA
AAGTCAACAAATTCATCATTAAAGAAACGAAACTCGATGGACGCAAACGT
GGACTTATCGAAGAATTTGACGGATACTTGATTGACTACTAAAAAGGGTG
GAGTTCAAGTGTCTCCTCATCAGTTCAAACTCGGCATcaaatttggaaga
aaaaacaaaagaattaccAAGGAAGAAAGGTTTCAGGGAAGATTCTGTCA
AGATACAGCATGAAGTTACAGAGCATGTTGGCCATTGCCTTTACGTTGGT
TGTTTTTGCAGAGGCTTATAATTTCAATCATGATATGGGCGCTAAATTAG
ATGGGCGTATTATCCACGTGGAGTCGTTGAGATATAGAGGTCATTGGTTG
AAATCATCGTTTCACAACGGTGGTAAATGGATTGCTGTTTATGGATTGGC
TCAAAGAGATACCTATTATACACAATGGTCGCAATTTAAGGTCAAACACG
TGGGAGGTGGTAAGGTGACGATCGAATCAATGACCTATCCACACCACTAC
TTTGACTCTCATTACTCTGGATGGGTTGGGACTACTTACTCCACATACCC
TGATAATCAGGCTTGGGCTCAATGGAAAATTTATTGCACCAGTCAATCAA
TGGATGTTTGTCGTTTTGAATCGATGAGATATCGAGGACATTACTTCGAC
TCCAGTCACACCGGAGGTCTTGGAGTTGCAAGATATGGCAATGGTTGGTC
AAGGTTCCGAATTTTAGCACCAAACGCTGAAGATTACTATGTGACAATCC
TTTCTACAGAGAATCACAGCAGTGCTTCATCCAAGAAAACATTAACAGTT
GAAGAAGGGGTGATTGACTCAACAACCACCGAAAATACCATCACCACCTC
TGTCTCTGTTGAAGTTCAAAAAGCTTTCGTCACTGCATCAGCCTCCGTTA
CTCATGAATGGAAGCAAACTGAATCGAAGACATTCGAGAAACGAACCTCA
TTCACATACGAAGTTCCCATCCCTGCTCGTTCAAAGATCGAGGTCAAACA
ACTAACCGGTGAATACGGTCCTTTCCGAATCAAAGTCAACAAATTCATCA
TTAAAGAAACGAAACTCGATGGACGCAAACGTGGACTTATCGAAGAATTT
GACGGATACTTGATTGACTACTAAAAAGGGTGGAGTTCAAGTGTCTCCTC
ATCAGTTCAAACTCGGCATcaaatttggaagaaaaaacaaaagaattacc
AAGGAAGAAAGGTTTCAGGGAAGATTCTGTCAAGATACAGCATGAAGTTA
CAGAGCATGTTGGCCATTGCCTTTACGTTGGTTGTTTTTGCAGAGGCTTA
TAATTTCAATCATGATATGGGCGCTAAATTAGATGGGCGTATTATCCACG
TGGAGTCGTTGAGATATAGAGGTCATTGGTTGAAATCATCGTTTCACAAC
GGTGGTAAATGGATTGCTGTTTATGGATTGGCTCAAAGAGATACCTATTA
TACACAATGGTCGCAATTTAAGGTCAAACACGTGGGAGGTGGTAAGGTGA
CGATCGAATCAATGACCTATCCACACCACTACTTTGACTCTCATTACTCT
GGATGGGTTGGGACTACTTACTCCACATACCCTGATAATCAGGCTTGGGC
TCAATGGAAAATTTATTGCACCAGTCAATCAATGGATGTTTGTCGTTTTG
AATCGATGAGATATCGAGGACATTACTTCGACTCCAGTCACACCGGAGGT
CTTGGAGTTGCAAGATATGGCAATGGTTGGTCAAGGTTCCGAATTTTAGC
ACCAAACGCTGAAGATTACTATGTGACAATCCTTTCTACAGAGAATCACA
GCAGTGCTTCATCCAAGAAAACATTAACAGTTGAAGAAGGGGTGATTGAC
TCAACAACCACCGAAAATACCATCACCACCTCTGTCTCTGTTGAAGTTCA
AAAAGCTTTCGTCACTGCATCAGCCTCCGTTACTCATGAATGGAAGCAAA
CTGAATCGAAGACATTCGAGAAACGAACCTCATTCACATACGAAGTTCCC
ATCCCTGCTCGTTCAAAGATCGAGGTCAAACAACTAACCGGTGAATACGG
TCCTTTCCGAATCAAAGTCAACAAATTCATCATTAAAGAAACGAAACTCG
ATGGACGCAAACGTGGACTTATCGAAGAATTTGACGGATACTTGATTGAC
TACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009834XLOC_009834Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017582-exon-sc0000271-1491911889:47962..48056TCONS_00017582-exon-sc0000271-1491911889:47962..48056Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1510915933:47962..48056TCONS_00017582-exon-sc0000271-1510915933:47962..48056Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1575043694:47962..48056TCONS_00017582-exon-sc0000271-1575043694:47962..48056Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1491911889:48787..48847TCONS_00017582-exon-sc0000271-1491911889:48787..48847Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1510915933:48787..48847TCONS_00017582-exon-sc0000271-1510915933:48787..48847Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1575043694:48787..48847TCONS_00017582-exon-sc0000271-1575043694:48787..48847Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1491911889:49075..49267TCONS_00017582-exon-sc0000271-1491911889:49075..49267Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1510915933:49075..49267TCONS_00017582-exon-sc0000271-1510915933:49075..49267Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1575043694:49075..49267TCONS_00017582-exon-sc0000271-1575043694:49075..49267Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1491911889:50102..50117TCONS_00017582-exon-sc0000271-1491911889:50102..50117Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1510915933:50102..50117TCONS_00017582-exon-sc0000271-1510915933:50102..50117Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1575043694:50102..50117TCONS_00017582-exon-sc0000271-1575043694:50102..50117Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1491911889:50985..51088TCONS_00017582-exon-sc0000271-1491911889:50985..51088Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1510915933:50985..51088TCONS_00017582-exon-sc0000271-1510915933:50985..51088Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1575043694:50985..51088TCONS_00017582-exon-sc0000271-1575043694:50985..51088Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1491911889:51569..51750TCONS_00017582-exon-sc0000271-1491911889:51569..51750Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1510915933:51569..51750TCONS_00017582-exon-sc0000271-1510915933:51569..51750Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1575043694:51569..51750TCONS_00017582-exon-sc0000271-1575043694:51569..51750Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1491911889:52327..52498TCONS_00017582-exon-sc0000271-1491911889:52327..52498Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1510915933:52327..52498TCONS_00017582-exon-sc0000271-1510915933:52327..52498Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1575043694:52327..52498TCONS_00017582-exon-sc0000271-1575043694:52327..52498Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1491911889:53008..53406TCONS_00017582-exon-sc0000271-1491911889:53008..53406Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1510915933:53008..53406TCONS_00017582-exon-sc0000271-1510915933:53008..53406Clytia hemisphaericaexon
TCONS_00017582-exon-sc0000271-1575043694:53008..53406TCONS_00017582-exon-sc0000271-1575043694:53008..53406Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017582-proteinTCONS_00017582-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000271supercontigsc0000271:47962..53406 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1823.12	1764.34	1525.3	1594.62	73.641	55.8826	15.9305	19.7617	1.39053	2.8321	2.4494	0.981424	0	0.580544	0	0	23.8684	54.6726	0.000704574	0	98.7247	102.618	766.497	602.008	2.62248	5.12517	30.3096	51.5089	316.192	409.073
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017582 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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