TCONS_00017489 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017489
Unique NameTCONS_00017489
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3332

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017489 ID=TCONS_00017489|Name=TCONS_00017489|organism=Clytia hemisphaerica|type=transcript|length=3332bp
tcaagatggcggaaaGCTGAATATCTGCAGACATGAAACATTGATtcgtg
aaaaagttttttaattttattcacaTTGCAACACAAATTTTGCATCCAGC
TGATACAGACACCAACCTGTCTTCTATACTTCAACAGCAAGCATGCCGAT
GATATTGCGGGATGGAAGTTTTTATTCACCTTTTGAAAGCCAACATATGA
TTCTACGAGATGGGAAAACAGTCCATTCATTTCAAGCAAGCGTTTTCAAC
CGATTACTTCGCTCACCCTTCGGACTGTGGAATCCATTCCGAAGCTATCA
AAACTCAAACAATGACTACGTTCCAGATGAAGAGATCGACTCGTATGACG
GTTCTTCAGCGTCGAACAACTCTATCGTCAGCTCTTCAGCGTCGAACAAC
TCTTACGGCGGTCCTACAAGTCGTAACAACTCTCACAGTGACCCTTTAGC
CCGTAACAATTCGTACGGAGGCCCTGCAAGTCGCAACAACTCTCACATCG
ACCCTTCAGCCCGTAACTATTCTTACGGTGGCTCTACAAGTCGTAACAAC
TCTCAAAGCGGCCCTTCAGCCCGTAATAATTCGTACGGCGGCCCTGCAAG
TCGTAACAACTCTCACATCGACCCTTCAGCCCGTAACTATTCTTACGGCG
GCTCTACAAGTCGCAACAACTCTCAAAGTGGCCCTTCAGCCCGTAACAAT
TCTTACGGCGGACCTACAAGTCGTAACAGCTCACTAAGCGGACCTTTAGC
ACCGATCGACTCCTACGGTGAATCTTCATTGTCAGAAAACTCTCACAGCG
ACCCTTCCGCCCGTAACAATTCTTACGGCGGACCTACAAGTCGTAACAAC
TCTTACAGCGATCCTTCAGCCCGTAACAATTCTTACGGCGGTCCTACAAG
TCGTAACAACTCACAAAGCGGACCTTCAACCCGTAACAATTCTTACGGCG
GACCTTCAACCCGTAACAATTCTTACGACGGACCTTCAACCCGTAATAAC
TCTTACGGAGGTTCTTCAGCGTCGAACAACTCTTACGGCGGTCCTACAAG
TCGTAACAACTCACAAAGCGGACCTTCAACCCGTAACAATTCTTACGACG
GACCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATAAC
TCTTGCGACGACCTTCCAGTGTCGAACAACTCTTACGACGACCCTCCAGT
GTCGAACAACTCTTACGGCGGCCTTACAACTCGTAACAACTCTCACAGTG
GCCCTTCAACCCGCAACAATTCTTACGGCGGACCTTCAACCCGCAACAAT
TCTTACGGCGGACCTTCAACCCGTAACAATTCTTACGACGGACCTTCAAC
CCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATAACTCTTGCGACG
ACCTTCCAGTGTCGAACAATTCTTACGGCGGACCTTCAACCCGTAACAAT
TCTTACGACGGACCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGC
GTCGAATAAATCTTACGACGACCTTCCAGTGTCGAACAACTCTTACGGCG
GCCTTACAACTCGTAACAACTCTCACAGCGGCCCTTCAACCCGTAACAAT
TCTTACGGCGGCCCTTCAACCCGTAACAACTCTCTCAACCCTCCACCGTC
AGACAATACTTACAGCAGCCCTTCAACCCTTAGAAGATCACCTCGTAACA
AATCTCGCAGCGGCTCCTCGGGGTCAAACAATTCTTCCGGTGGGCCTTTA
GCACCGATCGACTCCTACGGTGGCCCTTCATTGTCGGAAAACTCCCACAG
CGACCCTTCAGTGCCGATTGACTCCTGCGGTGGTCCTTTAGAGTCCACCC
CAGCAAATAGCCAAGCTAGTGGCATTAATGACTATTTACCAAATTTCTTA
AAACGAAAAATCACCATGCCACTTATCAAGAGTTTCAGTGACATCCATCA
AGCAAATGACGCTCAACCCGACGCTCAAGCATTATCGTCCAAACCGTCAC
AATCGATGTATGCGTGTTACTCTGAAAAGTCACCCGCCTCCAAACCTGGT
GTACGTAAAAGCCCCCGTACTACGGCTCTTTCTAAACAATACGGTGAAAT
GGATAACGGTAAACCTCAGCAAACTTTAGCAAGCAAGTACCCGTATGCGT
TCACAGTCTTGATGATTTTCGCTTACAAATTCTTTATCGCCAGCACGGAC
GTTATGATCAAAGTTGAGAAGCACCTCAAGATTTACTTGAAAATTGCGCT
CCACTATTTCTACAGGTTCCAATCCAGAGCTCAGAAAGCCCTCCGCCCTT
ATTTCATCAAACTTATCCAGTATGCTCGTAAACGAGGCTTCAATCTTAAT
GGAATCCGGAAAAAATACTTAACATTAAACATGATCGTTTTCGTGTTACC
TTTCGTGTTGGGTGTGATGCTACTTGATGGTTACCAGTACTCGAGAATGC
AGATCGATGATATTGGTTCAATGATACCAAACTCCATCAAGATGAACATA
CCGGCCAAAGAGAATGTGACCTTCTGGCATGTCCCGCCCTCAGGACAAAC
CTATGAAGGTTCAATTGCTGAGAATCTAAACGATGGTAACAACATCGTAA
TTCATTTACGAGACGAAGCATTTGGCAATTCTTACCATCGAACTAATGTT
TTTAAAGTGTTATCCGATGCTGGATTTCATGTTATCATACCAAATGAACC
GATCCAAGAAACTGACTTCTTATCTCTATGGACTGGCGTTAAAGTTCTGT
TAGATAAGAACCAAGACATGTATATTTGGAGTGACATCCAAAACGTTGGA
CATACAACCCCATATGTTGACTTGTTAACACAATCGAGTTTGTATCCAAA
AGGTGTCATCATTGAATCTACTGTCCGAGATAATTTCGATTCCGTCCGCA
ATTTGGAGATCTGGAAAGCTACAACAAAGAATGGTTATCTCAGCAATGCT
CCAACATTGAATTATTTGAAGTGCCCTCTGACAACTCCATCCTACAAATT
GAATCATCTTCGAGAAGAAATCGCTCTTTGCATCAATACGGTCAGCTTTA
ATGCTGATTTTAAAATGAGGCAATAATCGCCTTGTCTATAAAtaacaaat
ctttaaaaaaattacgtatacaatttgaattttaacttttttctaaaact
ttggtatagattttttatatttttttataatttcaacttttttttataga
tAATTTTTTGATTAAAGGTGGaactaaaaaaatcaaaaaaaattaaatga
tatTTAAAACCTTTGGGAATAATTTATGGATATCATCCTATTTCGTatgt
attaaatattttttgaaattagttaaaataaa
Run BLAST on NCBI

protein sequence of TCONS_00017489-protein

>TCONS_00017489-protein ID=TCONS_00017489-protein|Name=TCONS_00017489-protein|organism=Clytia hemisphaerica|type=polypeptide|length=977bp
MPMILRDGSFYSPFESQHMILRDGKTVHSFQASVFNRLLRSPFGLWNPFR
SYQNSNNDYVPDEEIDSYDGSSASNNSIVSSSASNNSYGGPTSRNNSHSD
PLARNNSYGGPASRNNSHIDPSARNYSYGGSTSRNNSQSGPSARNNSYGG
PASRNNSHIDPSARNYSYGGSTSRNNSQSGPSARNNSYGGPTSRNSSLSG
PLAPIDSYGESSLSENSHSDPSARNNSYGGPTSRNNSYSDPSARNNSYGG
PTSRNNSQSGPSTRNNSYGGPSTRNNSYDGPSTRNNSYGGSSASNNSYGG
PTSRNNSQSGPSTRNNSYDGPSTRNNSYGGSSASNNSCDDLPVSNNSYDD
PPVSNNSYGGLTTRNNSHSGPSTRNNSYGGPSTRNNSYGGPSTRNNSYDG
PSTRNNSYGGSSASNNSCDDLPVSNNSYGGPSTRNNSYDGPSTRNNSYGG
SSASNKSYDDLPVSNNSYGGLTTRNNSHSGPSTRNNSYGGPSTRNNSLNP
PPSDNTYSSPSTLRRSPRNKSRSGSSGSNNSSGGPLAPIDSYGGPSLSEN
SHSDPSVPIDSCGGPLESTPANSQASGINDYLPNFLKRKITMPLIKSFSD
IHQANDAQPDAQALSSKPSQSMYACYSEKSPASKPGVRKSPRTTALSKQY
GEMDNGKPQQTLASKYPYAFTVLMIFAYKFFIASTDVMIKVEKHLKIYLK
IALHYFYRFQSRAQKALRPYFIKLIQYARKRGFNLNGIRKKYLTLNMIVF
VLPFVLGVMLLDGYQYSRMQIDDIGSMIPNSIKMNIPAKENVTFWHVPPS
GQTYEGSIAENLNDGNNIVIHLRDEAFGNSYHRTNVFKVLSDAGFHVIIP
NEPIQETDFLSLWTGVKVLLDKNQDMYIWSDIQNVGHTTPYVDLLTQSSL
YPKGVIIESTVRDNFDSVRNLEIWKATTKNGYLSNAPTLNYLKCPLTTPS
YKLNHLREEIALCINTVSFNADFKMRQ
Run BLAST on NCBI

transcript from alignment at sc0000269:52928..56502+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017489 ID=TCONS_00017489|Name=TCONS_00017489|organism=Clytia hemisphaerica|type=transcript|length=3575bp|location=Sequence derived from alignment at sc0000269:52928..56502+ (Clytia hemisphaerica)
tcaagatggcggaaaGCTGAATATCTGCAGACATGAAACATTGATtcgtg aaaaagttttttaattttattcacaTTGCAACACAAATTTTGCATCCAGC TGATACAGACACCAACCTGTCTTCTATACTTCAACAGCAAGCATGCCGAT GATATTGCGGGATGGAAGTTTTTATTCACCTTTTGAAAGCCAACATATGA TTCTACGAGATGGGAAAACAGTCCATTCATTTCAAGCAAGCGTTTTCAAC CGATTACTTCGCTCACCCTTCGGACTGTGGAATCCATTCCGAAGCTATCA AAACTCAAACAATGACTACGTTCCAGATGAAGAGATCGACTCGTATGACG GTTCTTCAGCGTCGAACAACTCTATCGTCAGCTCTTCAGCGTCGAACAAC TCTTACGGCGGTCCTACAAGTCGTAACAACTCTCACAGTGACCCTTTAGC CCGTAACAATTCGTACGGAGGCCCTGCAAGTCGCAACAACTCTCACATCG ACCCTTCAGCCCGTAACTATTCTTACGGTGGCTCTACAAGTCGTAACAAC TCTCAAAGCGGCCCTTCAGCCCGTAATAATTCGTACGGCGGCCCTGCAAG TCGTAACAACTCTCACATCGACCCTTCAGCCCGTAACTATTCTTACGGCG GCTCTACAAGTCGCAACAACTCTCAAAGTGGCCCTTCAGCCCGTAACAAT TCTTACGGCGGACCTACAAGTCGTAACAGCTCACTAAGCGGACCTTTAGC ACCGATCGACTCCTACGGTGAATCTTCATTGTCAGAAAACTCTCACAGCG ACCCTTCCGCCCGTAACAATTCTTACGGCGGACCTACAAGTCGTAACAAC TCTTACAGCGATCCTTCAGCCCGTAACAATTCTTACGGCGGTCCTACAAG TCGTAACAACTCACAAAGCGGACCTTCAACCCGTAACAATTCTTACGGCG GACCTTCAACCCGTAACAATTCTTACGACGGACCTTCAACCCGTAATAAC TCTTACGGAGGTTCTTCAGCGTCGAACAACTCTTACGGCGGTCCTACAAG TCGTAACAACTCACAAAGCGGACCTTCAACCCGTAACAATTCTTACGACG GACCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATAAC TCTTGCGACGACCTTCCAGTGTCGAACAACTCTTACGACGACCCTCCAGT GTCGAACAACTCTTACGGCGGCCTTACAACTCGTAACAACTCTCACAGTG GCCCTTCAACCCGCAACAATTCTTACGGCGGACCTTCAACCCGCAACAAT TCTTACGGCGGACCTTCAACCCGTAACAATTCTTACGACGGACCTTCAAC CCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATAACTCTTGCGACG ACCTTCCAGTGTCGAACAATTCTTACGGCGGACCTTCAACCCGTAACAAT TCTTACGACGGACCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGC GTCGAATAAATCTTACGACGACCTTCCAGTGTCGAACAACTCTTACGGCG GCCTTACAACTCGTAACAACTCTCACAGCGGCCCTTCAACCCGTAACAAT TCTTACGGCGGCCCTTCAACCCGTAACAACTCTCTCAACCCTCCACCGTC AGACAATACTTACAGCAGCCCTTCAACCCTTAGAAGATCACCTCGTAACA AATCTCGCAGCGGCTCCTCGGGGTCAAACAATTCTTCCGGTGGGCCTTTA GCACCGATCGACTCCTACGGTGGCCCTTCATTGTCGGAAAACTCCCACAG CGACCCTTCAGTGCCGATTGACTCCTGCGGTGGTCCTTTAGAGTCCACCC CAGCAAATAGCCAAGCTAGTGGCATTAATGACTATTTACCAAATTTCTTA AAACGAAAAATCACCATGCCACTTATCAAGAGTTTCAGTGACATCCATCA AGCAAATGACGCTCAACCCGACGCTCAAGCATTATCGTCCAAACCGTCAC AATCGATGTATGCGTGTTACTCTGAAAAGTCACCCGCCTCCAAACCTGGT GTACGTAAAAGCCCCCGTACTACGGCTCTTTCTAAACAATACGGTGAAAT GGATAACGGTAAACCTCAGCAAACTTTAGCAAGCAAGTACCCGTATGCGT TCACAGTCTTGATGATTTTCGCTTACAAATTCTTTATCGCCAGCACGGAC GTTATGATCAAAGTTGAGAAGCACCTCAAGATTTACTTGAAAATTGCGCT CCACTATTTCTACAGGTATGTTATACATTATTTTTCCTAATTGgtacttt ttttataaatgaaaacgaaaaatcATGTAAATGCATAAGATAGACGTAGA CAGGCACCTTGATATTTTGTGTTATATTCTTCtactgaaaattaaaataa ttttacatgATCTTGCCACAGTAAATACTTAGATCAAGCAGTTCCCAAGA ATTTTTCTACGCAAAATATCAAGGTGCCTGTTGTAAAATATAACCATTAT TCTTCTAGGTTCCAATCCAGAGCTCAGAAAGCCCTCCGCCCTTATTTCAT CAAACTTATCCAGTATGCTCGTAAACGAGGCTTCAATCTTAATGGAATCC GGAAAAAATACTTAACATTAAACATGATCGTTTTCGTGTTACCTTTCGTG TTGGGTGTGATGCTACTTGATGGTTACCAGTACTCGAGAATGCAGATCGA TGATATTGGTTCAATGATACCAAACTCCATCAAGATGAACATACCGGCCA AAGAGAATGTGACCTTCTGGCATGTCCCGCCCTCAGGACAAACCTATGAA GGTTCAATTGCTGAGAATCTAAACGATGGTAACAACATCGTAATTCATTT ACGAGACGAAGCATTTGGCAATTCTTACCATCGAACTAATGTTTTTAAAG TGTTATCCGATGCTGGATTTCATGTTATCATACCAAATGAACCGATCCAA GAAACTGACTTCTTATCTCTATGGACTGGCGTTAAAGTTCTGTTAGATAA GAACCAAGACATGTATATTTGGAGTGACATCCAAAACGTTGGACATACAA CCCCATATGTTGACTTGTTAACACAATCGAGTTTGTATCCAAAAGGTGTC ATCATTGAATCTACTGTCCGAGATAATTTCGATTCCGTCCGCAATTTGGA GATCTGGAAAGCTACAACAAAGAATGGTTATCTCAGCAATGCTCCAACAT TGAATTATTTGAAGTGCCCTCTGACAACTCCATCCTACAAATTGAATCAT CTTCGAGAAGAAATCGCTCTTTGCATCAATACGGTCAGCTTTAATGCTGA TTTTAAAATGAGGCAATAATCGCCTTGTCTATAAAtaacaaatctttaaa aaaattacgtatacaatttgaattttaacttttttctaaaactttggtat agattttttatatttttttataatttcaacttttttttatagatAATTTT TTGATTAAAGGTGGaactaaaaaaatcaaaaaaaattaaatgatatTTAA AACCTTTGGGAATAATTTATGGATATCATCCTATTTCGTatgtattaaat attttttgaaattagttaaaataaa

Coding sequence (CDS) from alignment at sc0000269:52928..56502+

>TCONS_00017489 ID=TCONS_00017489|Name=TCONS_00017489|organism=Clytia hemisphaerica|type=CDS|length=5868bp|location=Sequence derived from alignment at sc0000269:52928..56502+ (Clytia hemisphaerica)
ATGCCGATGATATTGCGGGATGGAAGTTTTTATTCACCTTTTGAAAGCCA
ACATATGATTCTACGAGATGGGAAAACAGTCCATTCATTTCAAGCAAGCG
TTTTCAACCGATTACTTCGCTCACCCTTCGGACTGTGGAATCCATTCCGA
AGCTATCAAAACTCAAACAATGACTACGTTCCAGATGAAGAGATCGACTC
GTATGACGGTTCTTCAGCGTCGAACAACTCTATCGTCAGCTCTTCAGCGT
CGAACAACTCTTACGGCGGTCCTACAAGTCGTAACAACTCTCACAGTGAC
CCTTTAGCCCGTAACAATTCGTACGGAGGCCCTGCAAGTCGCAACAACTC
TCACATCGACCCTTCAGCCCGTAACTATTCTTACGGTGGCTCTACAAGTC
GTAACAACTCTCAAAGCGGCCCTTCAGCCCGTAATAATTCGTACGGCGGC
CCTGCAAGTCGTAACAACTCTCACATCGACCCTTCAGCCCGTAACTATTC
TTACGGCGGCTCTACAAGTCGCAACAACTCTCAAAGTGGCCCTTCAGCCC
GTAACAATTCTTACGGCGGACCTACAAGTCGTAACAGCTCACTAAGCGGA
CCTTTAGCACCGATCGACTCCTACGGTGAATCTTCATTGTCAGAAAACTC
TCACAGCGACCCTTCCGCCCGTAACAATTCTTACGGCGGACCTACAAGTC
GTAACAACTCTTACAGCGATCCTTCAGCCCGTAACAATTCTTACGGCGGT
CCTACAAGTCGTAACAACTCACAAAGCGGACCTTCAACCCGTAACAATTC
TTACGGCGGACCTTCAACCCGTAACAATTCTTACGACGGACCTTCAACCC
GTAATAACTCTTACGGAGGTTCTTCAGCGTCGAACAACTCTTACGGCGGT
CCTACAAGTCGTAACAACTCACAAAGCGGACCTTCAACCCGTAACAATTC
TTACGACGGACCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGCGT
CGAATAACTCTTGCGACGACCTTCCAGTGTCGAACAACTCTTACGACGAC
CCTCCAGTGTCGAACAACTCTTACGGCGGCCTTACAACTCGTAACAACTC
TCACAGTGGCCCTTCAACCCGCAACAATTCTTACGGCGGACCTTCAACCC
GCAACAATTCTTACGGCGGACCTTCAACCCGTAACAATTCTTACGACGGA
CCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATAACTC
TTGCGACGACCTTCCAGTGTCGAACAATTCTTACGGCGGACCTTCAACCC
GTAACAATTCTTACGACGGACCTTCAACCCGTAATAACTCTTACGGAGGT
TCTTCAGCGTCGAATAAATCTTACGACGACCTTCCAGTGTCGAACAACTC
TTACGGCGGCCTTACAACTCGTAACAACTCTCACAGCGGCCCTTCAACCC
GTAACAATTCTTACGGCGGCCCTTCAACCCGTAACAACTCTCTCAACCCT
CCACCGTCAGACAATACTTACAGCAGCCCTTCAACCCTTAGAAGATCACC
TCGTAACAAATCTCGCAGCGGCTCCTCGGGGTCAAACAATTCTTCCGGTG
GGCCTTTAGCACCGATCGACTCCTACGGTGGCCCTTCATTGTCGGAAAAC
TCCCACAGCGACCCTTCAGTGCCGATTGACTCCTGCGGTGGTCCTTTAGA
GTCCACCCCAGCAAATAGCCAAGCTAGTGGCATTAATGACTATTTACCAA
ATTTCTTAAAACGAAAAATCACCATGCCACTTATCAAGAGTTTCAGTGAC
ATCCATCAAGCAAATGACGCTCAACCCGACGCTCAAGCATTATCGTCCAA
ACCGTCACAATCGATGTATGCGTGTTACTCTGAAAAGTCACCCGCCTCCA
AACCTGGTGTACGTAAAAGCCCCCGTACTACGGCTCTTTCTAAACAATAC
GGTGAAATGGATAACGGTAAACCTCAGCAAACTTTAGCAAGCAAGTACCC
GTATGCGTTCACAGTCTTGATGATTTTCGCTTACAAATTCTTTATCGCCA
GCACGGACGTTATGATCAAAGTTGAGAAGCACCTCAAGATTTACTTGAAA
ATTGCGCTCCACTATTTCTACAGGTTCCAATCCAGAGCTCAGAAAGCCCT
CCGCCCTTATTTCATCAAACTTATCCAGTATGCTCGTAAACGAGGCTTCA
ATCTTAATGGAATCCGGAAAAAATACTTAACATTAAACATGATCGTTTTC
GTGTTACCTTTCGTGTTGGGTGTGATGCTACTTGATGGTTACCAGTACTC
GAGAATGCAGATCGATGATATTGGTTCAATGATACCAAACTCCATCAAGA
TGAACATACCGGCCAAAGAGAATGTGACCTTCTGGCATGTCCCGCCCTCA
GGACAAACCTATGAAGGTTCAATTGCTGAGAATCTAAACGATGGTAACAA
CATCGTAATTCATTTACGAGACGAAGCATTTGGCAATTCTTACCATCGAA
CTAATGTTTTTAAAGTGTTATCCGATGCTGGATTTCATGTTATCATACCA
AATGAACCGATCCAAGAAACTGACTTCTTATCTCTATGGACTGGCGTTAA
AGTTCTGTTAGATAAGAACCAAGACATGTATATTTGGAGTGACATCCAAA
ACGTTGGACATACAACCCCATATGTTGACTTGTTAACACAATCGAGTTTG
TATCCAAAAGGTGTCATCATTGAATCTACTGTCCGAGATAATTTCGATTC
CGTCCGCAATTTGGAGATCTGGAAAGCTACAACAAAGAATGGTTATCTCA
GCAATGCTCCAACATTGAATTATTTGAAGTGCCCTCTGACAACTCCATCC
TACAAATTGAATCATCTTCGAGAAGAAATCGCTCTTTGCATCAATACGGT
CAGCTTTAATGCTGATTTTAAAATGAGGCAATAAATGCCGATGATATTGC
GGGATGGAAGTTTTTATTCACCTTTTGAAAGCCAACATATGATTCTACGA
GATGGGAAAACAGTCCATTCATTTCAAGCAAGCGTTTTCAACCGATTACT
TCGCTCACCCTTCGGACTGTGGAATCCATTCCGAAGCTATCAAAACTCAA
ACAATGACTACGTTCCAGATGAAGAGATCGACTCGTATGACGGTTCTTCA
GCGTCGAACAACTCTATCGTCAGCTCTTCAGCGTCGAACAACTCTTACGG
CGGTCCTACAAGTCGTAACAACTCTCACAGTGACCCTTTAGCCCGTAACA
ATTCGTACGGAGGCCCTGCAAGTCGCAACAACTCTCACATCGACCCTTCA
GCCCGTAACTATTCTTACGGTGGCTCTACAAGTCGTAACAACTCTCAAAG
CGGCCCTTCAGCCCGTAATAATTCGTACGGCGGCCCTGCAAGTCGTAACA
ACTCTCACATCGACCCTTCAGCCCGTAACTATTCTTACGGCGGCTCTACA
AGTCGCAACAACTCTCAAAGTGGCCCTTCAGCCCGTAACAATTCTTACGG
CGGACCTACAAGTCGTAACAGCTCACTAAGCGGACCTTTAGCACCGATCG
ACTCCTACGGTGAATCTTCATTGTCAGAAAACTCTCACAGCGACCCTTCC
GCCCGTAACAATTCTTACGGCGGACCTACAAGTCGTAACAACTCTTACAG
CGATCCTTCAGCCCGTAACAATTCTTACGGCGGTCCTACAAGTCGTAACA
ACTCACAAAGCGGACCTTCAACCCGTAACAATTCTTACGGCGGACCTTCA
ACCCGTAACAATTCTTACGACGGACCTTCAACCCGTAATAACTCTTACGG
AGGTTCTTCAGCGTCGAACAACTCTTACGGCGGTCCTACAAGTCGTAACA
ACTCACAAAGCGGACCTTCAACCCGTAACAATTCTTACGACGGACCTTCA
ACCCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATAACTCTTGCGA
CGACCTTCCAGTGTCGAACAACTCTTACGACGACCCTCCAGTGTCGAACA
ACTCTTACGGCGGCCTTACAACTCGTAACAACTCTCACAGTGGCCCTTCA
ACCCGCAACAATTCTTACGGCGGACCTTCAACCCGCAACAATTCTTACGG
CGGACCTTCAACCCGTAACAATTCTTACGACGGACCTTCAACCCGTAATA
ACTCTTACGGAGGTTCTTCAGCGTCGAATAACTCTTGCGACGACCTTCCA
GTGTCGAACAATTCTTACGGCGGACCTTCAACCCGTAACAATTCTTACGA
CGGACCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATA
AATCTTACGACGACCTTCCAGTGTCGAACAACTCTTACGGCGGCCTTACA
ACTCGTAACAACTCTCACAGCGGCCCTTCAACCCGTAACAATTCTTACGG
CGGCCCTTCAACCCGTAACAACTCTCTCAACCCTCCACCGTCAGACAATA
CTTACAGCAGCCCTTCAACCCTTAGAAGATCACCTCGTAACAAATCTCGC
AGCGGCTCCTCGGGGTCAAACAATTCTTCCGGTGGGCCTTTAGCACCGAT
CGACTCCTACGGTGGCCCTTCATTGTCGGAAAACTCCCACAGCGACCCTT
CAGTGCCGATTGACTCCTGCGGTGGTCCTTTAGAGTCCACCCCAGCAAAT
AGCCAAGCTAGTGGCATTAATGACTATTTACCAAATTTCTTAAAACGAAA
AATCACCATGCCACTTATCAAGAGTTTCAGTGACATCCATCAAGCAAATG
ACGCTCAACCCGACGCTCAAGCATTATCGTCCAAACCGTCACAATCGATG
TATGCGTGTTACTCTGAAAAGTCACCCGCCTCCAAACCTGGTGTACGTAA
AAGCCCCCGTACTACGGCTCTTTCTAAACAATACGGTGAAATGGATAACG
GTAAACCTCAGCAAACTTTAGCAAGCAAGTACCCGTATGCGTTCACAGTC
TTGATGATTTTCGCTTACAAATTCTTTATCGCCAGCACGGACGTTATGAT
CAAAGTTGAGAAGCACCTCAAGATTTACTTGAAAATTGCGCTCCACTATT
TCTACAGGTTCCAATCCAGAGCTCAGAAAGCCCTCCGCCCTTATTTCATC
AAACTTATCCAGTATGCTCGTAAACGAGGCTTCAATCTTAATGGAATCCG
GAAAAAATACTTAACATTAAACATGATCGTTTTCGTGTTACCTTTCGTGT
TGGGTGTGATGCTACTTGATGGTTACCAGTACTCGAGAATGCAGATCGAT
GATATTGGTTCAATGATACCAAACTCCATCAAGATGAACATACCGGCCAA
AGAGAATGTGACCTTCTGGCATGTCCCGCCCTCAGGACAAACCTATGAAG
GTTCAATTGCTGAGAATCTAAACGATGGTAACAACATCGTAATTCATTTA
CGAGACGAAGCATTTGGCAATTCTTACCATCGAACTAATGTTTTTAAAGT
GTTATCCGATGCTGGATTTCATGTTATCATACCAAATGAACCGATCCAAG
AAACTGACTTCTTATCTCTATGGACTGGCGTTAAAGTTCTGTTAGATAAG
AACCAAGACATGTATATTTGGAGTGACATCCAAAACGTTGGACATACAAC
CCCATATGTTGACTTGTTAACACAATCGAGTTTGTATCCAAAAGGTGTCA
TCATTGAATCTACTGTCCGAGATAATTTCGATTCCGTCCGCAATTTGGAG
ATCTGGAAAGCTACAACAAAGAATGGTTATCTCAGCAATGCTCCAACATT
GAATTATTTGAAGTGCCCTCTGACAACTCCATCCTACAAATTGAATCATC
TTCGAGAAGAAATCGCTCTTTGCATCAATACGGTCAGCTTTAATGCTGAT
TTTAAAATGAGGCAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009788XLOC_009788Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017489-proteinTCONS_00017489-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017489-exon-sc0000269-1491911889:52928..55192TCONS_00017489-exon-sc0000269-1491911889:52928..55192Clytia hemisphaericaexon
TCONS_00017489-exon-sc0000269-1510915933:52928..55192TCONS_00017489-exon-sc0000269-1510915933:52928..55192Clytia hemisphaericaexon
TCONS_00017489-exon-sc0000269-1575043694:52928..55192TCONS_00017489-exon-sc0000269-1575043694:52928..55192Clytia hemisphaericaexon
TCONS_00017489-exon-sc0000269-1491911889:55436..56502TCONS_00017489-exon-sc0000269-1491911889:55436..56502Clytia hemisphaericaexon
TCONS_00017489-exon-sc0000269-1510915933:55436..56502TCONS_00017489-exon-sc0000269-1510915933:55436..56502Clytia hemisphaericaexon
TCONS_00017489-exon-sc0000269-1575043694:55436..56502TCONS_00017489-exon-sc0000269-1575043694:55436..56502Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:52928..56502 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0.0257251 0 0.0612792 0.0363177 0 0.164079 0.102737 0.070313 0.0741107 0.0956598 0.762723 1.14193 0.678437 0.793614 0.0674253 0.086386 0.855319 0.86795 0.10855 0.144651 0.0514912 0.0710515 0.455896 0.467288 0.15577 0.0332484 0.0252178 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017489 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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