XLOC_009788 (gene) - C. hemisphaerica

Overview
NameXLOC_009788
Unique NameXLOC_009788
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000269:52928..56502+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009788 ID=XLOC_009788|Name=XLOC_009788|organism=Clytia hemisphaerica|type=gene|length=3575bp|location=Sequence derived from alignment at sc0000269:52928..56502+ (Clytia hemisphaerica)
tcaagatggcggaaaGCTGAATATCTGCAGACATGAAACATTGATtcgtg
aaaaagttttttaattttattcacaTTGCAACACAAATTTTGCATCCAGC
TGATACAGACACCAACCTGTCTTCTATACTTCAACAGCAAGCATGCCGAT
GATATTGCGGGATGGAAGTTTTTATTCACCTTTTGAAAGCCAACATATGA
TTCTACGAGATGGGAAAACAGTCCATTCATTTCAAGCAAGCGTTTTCAAC
CGATTACTTCGCTCACCCTTCGGACTGTGGAATCCATTCCGAAGCTATCA
AAACTCAAACAATGACTACGTTCCAGATGAAGAGATCGACTCGTATGACG
GTTCTTCAGCGTCGAACAACTCTATCGTCAGCTCTTCAGCGTCGAACAAC
TCTTACGGCGGTCCTACAAGTCGTAACAACTCTCACAGTGACCCTTTAGC
CCGTAACAATTCGTACGGAGGCCCTGCAAGTCGCAACAACTCTCACATCG
ACCCTTCAGCCCGTAACTATTCTTACGGTGGCTCTACAAGTCGTAACAAC
TCTCAAAGCGGCCCTTCAGCCCGTAATAATTCGTACGGCGGCCCTGCAAG
TCGTAACAACTCTCACATCGACCCTTCAGCCCGTAACTATTCTTACGGCG
GCTCTACAAGTCGCAACAACTCTCAAAGTGGCCCTTCAGCCCGTAACAAT
TCTTACGGCGGACCTACAAGTCGTAACAGCTCACTAAGCGGACCTTTAGC
ACCGATCGACTCCTACGGTGAATCTTCATTGTCAGAAAACTCTCACAGCG
ACCCTTCCGCCCGTAACAATTCTTACGGCGGACCTACAAGTCGTAACAAC
TCTTACAGCGATCCTTCAGCCCGTAACAATTCTTACGGCGGTCCTACAAG
TCGTAACAACTCACAAAGCGGACCTTCAACCCGTAACAATTCTTACGGCG
GACCTTCAACCCGTAACAATTCTTACGACGGACCTTCAACCCGTAATAAC
TCTTACGGAGGTTCTTCAGCGTCGAACAACTCTTACGGCGGTCCTACAAG
TCGTAACAACTCACAAAGCGGACCTTCAACCCGTAACAATTCTTACGACG
GACCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATAAC
TCTTGCGACGACCTTCCAGTGTCGAACAACTCTTACGACGACCCTCCAGT
GTCGAACAACTCTTACGGCGGCCTTACAACTCGTAACAACTCTCACAGTG
GCCCTTCAACCCGCAACAATTCTTACGGCGGACCTTCAACCCGCAACAAT
TCTTACGGCGGACCTTCAACCCGTAACAATTCTTACGACGGACCTTCAAC
CCGTAATAACTCTTACGGAGGTTCTTCAGCGTCGAATAACTCTTGCGACG
ACCTTCCAGTGTCGAACAATTCTTACGGCGGACCTTCAACCCGTAACAAT
TCTTACGACGGACCTTCAACCCGTAATAACTCTTACGGAGGTTCTTCAGC
GTCGAATAAATCTTACGACGACCTTCCAGTGTCGAACAACTCTTACGGCG
GCCTTACAACTCGTAACAACTCTCACAGCGGCCCTTCAACCCGTAACAAT
TCTTACGGCGGCCCTTCAACCCGTAACAACTCTCTCAACCCTCCACCGTC
AGACAATACTTACAGCAGCCCTTCAACCCTTAGAAGATCACCTCGTAACA
AATCTCGCAGCGGCTCCTCGGGGTCAAACAATTCTTCCGGTGGGCCTTTA
GCACCGATCGACTCCTACGGTGGCCCTTCATTGTCGGAAAACTCCCACAG
CGACCCTTCAGTGCCGATTGACTCCTGCGGTGGTCCTTTAGAGTCCACCC
CAGCAAATAGCCAAGCTAGTGGCATTAATGACTATTTACCAAATTTCTTA
AAACGAAAAATCACCATGCCACTTATCAAGAGTTTCAGTGACATCCATCA
AGCAAATGACGCTCAACCCGACGCTCAAGCATTATCGTCCAAACCGTCAC
AATCGATGTATGCGTGTTACTCTGAAAAGTCACCCGCCTCCAAACCTGGT
GTACGTAAAAGCCCCCGTACTACGGCTCTTTCTAAACAATACGGTGAAAT
GGATAACGGTAAACCTCAGCAAACTTTAGCAAGCAAGTACCCGTATGCGT
TCACAGTCTTGATGATTTTCGCTTACAAATTCTTTATCGCCAGCACGGAC
GTTATGATCAAAGTTGAGAAGCACCTCAAGATTTACTTGAAAATTGCGCT
CCACTATTTCTACAGGTATGTTATACATTATTTTTCCTAATTGgtacttt
ttttataaatgaaaacgaaaaatcATGTAAATGCATAAGATAGACGTAGA
CAGGCACCTTGATATTTTGTGTTATATTCTTCtactgaaaattaaaataa
ttttacatgATCTTGCCACAGTAAATACTTAGATCAAGCAGTTCCCAAGA
ATTTTTCTACGCAAAATATCAAGGTGCCTGTTGTAAAATATAACCATTAT
TCTTCTAGGTTCCAATCCAGAGCTCAGAAAGCCCTCCGCCCTTATTTCAT
CAAACTTATCCAGTATGCTCGTAAACGAGGCTTCAATCTTAATGGAATCC
GGAAAAAATACTTAACATTAAACATGATCGTTTTCGTGTTACCTTTCGTG
TTGGGTGTGATGCTACTTGATGGTTACCAGTACTCGAGAATGCAGATCGA
TGATATTGGTTCAATGATACCAAACTCCATCAAGATGAACATACCGGCCA
AAGAGAATGTGACCTTCTGGCATGTCCCGCCCTCAGGACAAACCTATGAA
GGTTCAATTGCTGAGAATCTAAACGATGGTAACAACATCGTAATTCATTT
ACGAGACGAAGCATTTGGCAATTCTTACCATCGAACTAATGTTTTTAAAG
TGTTATCCGATGCTGGATTTCATGTTATCATACCAAATGAACCGATCCAA
GAAACTGACTTCTTATCTCTATGGACTGGCGTTAAAGTTCTGTTAGATAA
GAACCAAGACATGTATATTTGGAGTGACATCCAAAACGTTGGACATACAA
CCCCATATGTTGACTTGTTAACACAATCGAGTTTGTATCCAAAAGGTGTC
ATCATTGAATCTACTGTCCGAGATAATTTCGATTCCGTCCGCAATTTGGA
GATCTGGAAAGCTACAACAAAGAATGGTTATCTCAGCAATGCTCCAACAT
TGAATTATTTGAAGTGCCCTCTGACAACTCCATCCTACAAATTGAATCAT
CTTCGAGAAGAAATCGCTCTTTGCATCAATACGGTCAGCTTTAATGCTGA
TTTTAAAATGAGGCAATAATCGCCTTGTCTATAAAtaacaaatctttaaa
aaaattacgtatacaatttgaattttaacttttttctaaaactttggtat
agattttttatatttttttataatttcaacttttttttatagatAATTTT
TTGATTAAAGGTGGaactaaaaaaatcaaaaaaaattaaatgatatTTAA
AACCTTTGGGAATAATTTATGGATATCATCCTATTTCGTatgtattaaat
attttttgaaattagttaaaataaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00017489TCONS_00017489Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00017489-proteinTCONS_00017489-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000269supercontigsc0000269:52928..56502 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.03	0	0.06	0.04	0	0.16	0.1	0.07	0.07	0.1	0.76	1.14	0.68	0.79	0.07	0.09	0.86	0.87	0.11	0.14	0.05	0.07	0.46	0.47	0.16	0.03	0.03	0