TCONS_00017358 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017358
Unique NameTCONS_00017358
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1932

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017358 ID=TCONS_00017358|Name=TCONS_00017358|organism=Clytia hemisphaerica|type=transcript|length=1932bp
CTAATTAGCGGTATATAAAGGATTATTCTGCTCTTTCCTTTAAGATTCAG
AATCAAACGAAACATAGAAAGTGTACAGCCAACACACATATAAACGCATG
AACAAGATGAAACAATGGAATATTTTACAACTGATTGTTCTACTATCACT
CTCCATGTTGCTCAATGCACAAAACATAACAACAACACAAATCAACTCCA
CCACCACAACCACAGCTGCACCACCTATTGTCTCTGAACAAAATACTACG
ACATCAACGACCATTCCACCTTCGACAACAACCACCTCTGCCCCAGAAAC
AACTACCTCCAATCTATCGACAACCACCCCTGTTCCATCAACGACTACCC
ATTTCCCTGAGACCACCACCCCTGCCGCAGCAACAACAACGACCTTACCA
CCACCGGTAACAACGATTACTCTCCAATCAAACTCTTCGGAAAACACAAC
GGCAACTAATTCAACAATTACAACGAACACCCCCACAACTACAAAGACCA
CCCCtacaacgacaacgaccacccccACAACGACAACGATCACCCCTACT
ACCACAACGACCACCACTACACAACCCCCAAGTGCCTCTCCGTCAATCTA
CAACATGACTTTCAGCGCCATCAATGAAACTTCTTACTGCAATGGTAATG
GATATTTATTCCAAAGCGCTGATGGAACAACAAAATTATGCAGTTGTTTC
GAAGATTTCCATGGTCTTCAGTGTGAGGATAAAGTCAATACATGGTTACT
GAAAATCGTTTTCGCTTTGGCAATCTTGGCCGTCATCTTCTTGATCGCTG
CAATTTTCACTGGTTGCCAATGGCATTCTCGACTAGGAGACATCGAAGAA
AAAGAAGCTAAAGTGAAAAATTTAGCACACGAGAAAGATCAACTCAAAAA
GCAGAATTTAGACCTCCGACGTCGCTCACCGTCCCCATCAGGCCGACCAA
GGTCTAACTATGCGCCCTCGAATTACGCCCCTTCAGTCGTGGGTAGTCCC
AATGGTGGGTTTTATGACGATGACAGACGATCAGTAATGGATATGAGCAT
GCCCACATTTGATGCCATGCAACAAAAAAGGCTGAGTCAGCAATTTACAG
CCAATGGGGACGTTGCCTTGGAGATGGAGGAGGACGAGTTGGACGCAACA
CCCAACGAAAACAAAGATGGTGGAAATATGTTGAACCCTGATACTGTCTC
AATACATTCAGCATCAACGACCAACAGTGAAATGGTTCTCATTCCCAAAT
CCCCAAGAAATAATAAACAAAGGCGTCCAGTATCTCAAGAAATCCCTTCA
AACGCCATCATTGATAATCGTGGGTATATGGTTCAACCAAGAGGAGCTCG
TAGTCGATCCCCAAGTCCTACCAATAGTCATCATTCAGATTTAAGTATGG
AAAACATGAAACAATTTGATCGAAATGGTGGCTTGATGGAACCTCAACGT
GGGCGAGCAAGAAGTTTGATGGATTTAAGAGTAATCGCTTTGACTGGTGA
AGCTCAGAAATATCCAGGTGAAACACCGGGATCAAATTTATATAAATCTA
AAAgtattgaaaacattttaacaGGACAAGTGCATAAACTATCACCTCAA
GCACCTTCTTCCAATGTGTCGACCAGCTCTGGAGGAAGAGGCCGACCAAT
GGGTATCTTTGCACAACAGCAACAACGAGACATGGCTGATTCCGCGTTTT
GAGATGTTGCAGATGTTTTGGCATTCTTTGAATAGTTTTGATTTATtatg
aatatttatttttaattttcatttgggagGGTTGTATCAGAAAATTATCA
TCATTATGTAAATTATATTTAAATCTAAATAGCAGTATTTTTCAGcattc
ataaaaaaaagaatttagttaCTATTTTTATACCTACATTAAAAAGTATA
ATTTCGTTTTTCAACGCTATGATTTCTTTAAT
Run BLAST on NCBI

protein sequence of TCONS_00017358-protein

>TCONS_00017358-protein ID=TCONS_00017358-protein|Name=TCONS_00017358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=534bp
MNKMKQWNILQLIVLLSLSMLLNAQNITTTQINSTTTTTAAPPIVSEQNT
TTSTTIPPSTTTTSAPETTTSNLSTTTPVPSTTTHFPETTTPAAATTTTL
PPPVTTITLQSNSSENTTATNSTITTNTPTTTKTTPTTTTTTPTTTTITP
TTTTTTTTQPPSASPSIYNMTFSAINETSYCNGNGYLFQSADGTTKLCSC
FEDFHGLQCEDKVNTWLLKIVFALAILAVIFLIAAIFTGCQWHSRLGDIE
EKEAKVKNLAHEKDQLKKQNLDLRRRSPSPSGRPRSNYAPSNYAPSVVGS
PNGGFYDDDRRSVMDMSMPTFDAMQQKRLSQQFTANGDVALEMEEDELDA
TPNENKDGGNMLNPDTVSIHSASTTNSEMVLIPKSPRNNKQRRPVSQEIP
SNAIIDNRGYMVQPRGARSRSPSPTNSHHSDLSMENMKQFDRNGGLMEPQ
RGRARSLMDLRVIALTGEAQKYPGETPGSNLYKSKSIENILTGQVHKLSP
QAPSSNVSTSSGGRGRPMGIFAQQQQRDMADSAF
Run BLAST on NCBI

transcript from alignment at sc0000266:86011..88709+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017358 ID=TCONS_00017358|Name=TCONS_00017358|organism=Clytia hemisphaerica|type=transcript|length=2699bp|location=Sequence derived from alignment at sc0000266:86011..88709+ (Clytia hemisphaerica)
CTAATTAGCGGTATATAAAGGATTATTCTGCTCTTTCCTTTAAGATTCAG
AATCAAACGAAACATAGAAAGTGTACAGCCAACACACATATAAACGCATG
GTAAGGTATTTACaatgaattgtttttttatgttattttcCCTTGCGTTT
TTATCTTCTTCGTCGAGtcgttttgatttttggatgtttttgaaTCCTTA
TTGAATCTCATATTTACTTGATCTTTTCCAGAACAAGATGAAACAATGGA
ATATTTTACAACTGATTGTTCTACTATCACTCTCCATGTTGCTCAATGCA
CAAAACATAACAACAACACAAATCAACTCCACCACCACAACCACAGCTGC
ACCACCTATTGTCTCTGAACAAAATACTACGACATCAACGACCATTCCAC
CTTCGACAACAACCACCTCTGCCCCAGAAACAACTACCTCCAATCTATCG
ACAACCACCCCTGTTCCATCAACGACTACCCATTTCCCTGAGACCACCAC
CCCTGCCGCAGCAACAACAACGACCTTACCACCACCGGTAACAACGATTA
CTCTCCAATCAAACTCTTCGGAAAACACAACGGCAACTAATTCAACAATT
ACAACGAACACCCCCACAACTACAAAGACCACCCCtacaacgacaacgac
cacccccACAACGACAACGATCACCCCTACTACCACAACGACCACCACTA
CACAACCCCCAAGTGCCTCTCCGTCAATCTACAACATGACTTTCAGCGCC
ATCAATGAAACTTCTTACTGCAATGGTAATGGATATTTATTCCAAAGCGC
TGATGGAACAACAAAATTATGCAGTTGTTTCGAAGATTTCCATGGTCTTC
AGTGTGAGGATAAAGTCAATACATGTAAGTTAAATTTTGATCTTATGACT
GGAATGTAACAAGTTTTATAACAGCTCATCTATCTACTTTTCTTAACACT
TTATGGTGTGAGCAATTATTTAAAAACTTGAGAAATAATTTAATGTTTCG
ACAACAAATAttgatcaaaaaagttttcattttgttgATTGATAATGAAG
AATCGTTATTTCAAAGTGTCTTTTAATTAACAGTTGGAGCAATGAAAATA
ACGAGCGACTTGTTATCAATTATCTTATTTAAATAACAACTTCCCTGACT
TGGGAAATCCTGAGGAAACTTCCTCTTTTCAATTGTCCattcaatgatga
atttataattaattttcttctctcTTTTGTAGGGTTACTGAAAATCGTTT
TCGCTTTGGCAATCTTGGCCGTCATCTTCTTGATCGCTGCAATTTTCACT
GGTTGCCAATGGCATTCTCGACTAGGGTAAGTTTCAAACTAACGTAAAAA
TATAAAAGCACCAATAATGTCTACCTGAAATTTGCTTCAATATCTTTCAA
TAAATTCAAGCACATCACTAAGTAAGAGATCATAGATGGATAATGTCTTA
TTTCTTACATAAGtttataagaaatatttcataaatggCATACCGTTGgg
attgatttttttctcaatttcactCCAATGAACTCTGCATCTTTTATATG
TCTCCTTTCTCCTTTTTAAGACAGTTCTGATTTTTATTTCCATTTCCTTT
ATAGAGACATCGAAGAAAAAGAAGCTAAAGTGAAAAATTTAGCACACGAG
AAAGATCAACTCAAAAAGCAGAATTTAGACCTCCGACGTCGCTCACCGTC
CCCATCAGGCCGACCAAGGTCTAACTATGCGCCCTCGAATTACGCCCCTT
CAGTCGTGGGTAGTCCCAATGGTGGGTTTTATGACGATGACAGACGATCA
GTAATGGATATGAGCATGCCCACATTTGATGCCATGCAACAAAAAAGGCT
GAGTCAGCAATTTACAGCCAATGGGGACGTTGCCTTGGAGATGGAGGAGG
ACGAGTTGGACGCAACACCCAACGAAAACAAAGATGGTGGAAATATGTTG
AACCCTGATACTGTCTCAATACATTCAGCATCAACGACCAACAGTGAAAT
GGTTCTCATTCCCAAATCCCCAAGAAATAATAAACAAAGGCGTCCAGTAT
CTCAAGAAATCCCTTCAAACGCCATCATTGATAATCGTGGGTATATGGTT
CAACCAAGAGGAGCTCGTAGTCGATCCCCAAGTCCTACCAATAGTCATCA
TTCAGATTTAAGTATGGAAAACATGAAACAATTTGATCGAAATGGTGGCT
TGATGGAACCTCAACGTGGGCGAGCAAGAAGTTTGATGGATTTAAGAGTA
ATCGCTTTGACTGGTGAAGCTCAGAAATATCCAGGTGAAACACCGGGATC
AAATTTATATAAATCTAAAAgtattgaaaacattttaacaGGACAAGTGC
ATAAACTATCACCTCAAGCACCTTCTTCCAATGTGTCGACCAGCTCTGGA
GGAAGAGGCCGACCAATGGGTATCTTTGCACAACAGCAACAACGAGACAT
GGCTGATTCCGCGTTTTGAGATGTTGCAGATGTTTTGGCATTCTTTGAAT
AGTTTTGATTTATtatgaatatttatttttaattttcatttgggagGGTT
GTATCAGAAAATTATCATCATTATGTAAATTATATTTAAATCTAAATAGC
AGTATTTTTCAGcattcataaaaaaaagaatttagttaCTATTTTTATAC
CTACATTAAAAAGTATAATTTCGTTTTTCAACGCTATGATTTCTTTAAT

Coding sequence (CDS) from alignment at sc0000266:86011..88709+

>TCONS_00017358 ID=TCONS_00017358|Name=TCONS_00017358|organism=Clytia hemisphaerica|type=CDS|length=6420bp|location=Sequence derived from alignment at sc0000266:86011..88709+ (Clytia hemisphaerica)
ATGAACAAGATGAAACAATGGAATATTTTACAACTGATTGTTCTACTATC
ACTCTCCATGTTGCTCAATGCACAAAACATAACAACAACACAAATCAACT
CCACCACCACAACCACAGCTGCACCACCTATTGTCTCTGAACAAAATACT
ACGACATCAACGACCATTCCACCTTCGACAACAACCACCTCTGCCCCAGA
AACAACTACCTCCAATCTATCGACAACCACCCCTGTTCCATCAACGACTA
CCCATTTCCCTGAGACCACCACCCCTGCCGCAGCAACAACAACGACCTTA
CCACCACCGGTAACAACGATTACTCTCCAATCAAACTCTTCGGAAAACAC
AACGGCAACTAATTCAACAATTACAACGAACACCCCCACAACTACAAAGA
CCACCCCtacaacgacaacgaccacccccACAACGACAACGATCACCCCT
ACTACCACAACGACCACCACTACACAACCCCCAAGTGCCTCTCCGTCAAT
CTACAACATGACTTTCAGCGCCATCAATGAAACTTCTTACTGCAATGGTA
ATGGATATTTATTCCAAAGCGCTGATGGAACAACAAAATTATGCAGTTGT
TTCGAAGATTTCCATGGTCTTCAGTGTGAGGATAAAGTCAATACATGGTT
ACTGAAAATCGTTTTCGCTTTGGCAATCTTGGCCGTCATCTTCTTGATCG
CTGCAATTTTCACTGGTTGCCAATGGCATTCTCGACTAGGAGACATCGAA
GAAAAAGAAGCTAAAGTGAAAAATTTAGCACACGAGAAAGATCAACTCAA
AAAGCAGAATTTAGACCTCCGACGTCGCTCACCGTCCCCATCAGGCCGAC
CAAGGTCTAACTATGCGCCCTCGAATTACGCCCCTTCAGTCGTGGGTAGT
CCCAATGGTGGGTTTTATGACGATGACAGACGATCAGTAATGGATATGAG
CATGCCCACATTTGATGCCATGCAACAAAAAAGGCTGAGTCAGCAATTTA
CAGCCAATGGGGACGTTGCCTTGGAGATGGAGGAGGACGAGTTGGACGCA
ACACCCAACGAAAACAAAGATGGTGGAAATATGTTGAACCCTGATACTGT
CTCAATACATTCAGCATCAACGACCAACAGTGAAATGGTTCTCATTCCCA
AATCCCCAAGAAATAATAAACAAAGGCGTCCAGTATCTCAAGAAATCCCT
TCAAACGCCATCATTGATAATCGTGGGTATATGGTTCAACCAAGAGGAGC
TCGTAGTCGATCCCCAAGTCCTACCAATAGTCATCATTCAGATTTAAGTA
TGGAAAACATGAAACAATTTGATCGAAATGGTGGCTTGATGGAACCTCAA
CGTGGGCGAGCAAGAAGTTTGATGGATTTAAGAGTAATCGCTTTGACTGG
TGAAGCTCAGAAATATCCAGGTGAAACACCGGGATCAAATTTATATAAAT
CTAAAAgtattgaaaacattttaacaGGACAAGTGCATAAACTATCACCT
CAAGCACCTTCTTCCAATGTGTCGACCAGCTCTGGAGGAAGAGGCCGACC
AATGGGTATCTTTGCACAACAGCAACAACGAGACATGGCTGATTCCGCGT
TTTGAATGAACAAGATGAAACAATGGAATATTTTACAACTGATTGTTCTA
CTATCACTCTCCATGTTGCTCAATGCACAAAACATAACAACAACACAAAT
CAACTCCACCACCACAACCACAGCTGCACCACCTATTGTCTCTGAACAAA
ATACTACGACATCAACGACCATTCCACCTTCGACAACAACCACCTCTGCC
CCAGAAACAACTACCTCCAATCTATCGACAACCACCCCTGTTCCATCAAC
GACTACCCATTTCCCTGAGACCACCACCCCTGCCGCAGCAACAACAACGA
CCTTACCACCACCGGTAACAACGATTACTCTCCAATCAAACTCTTCGGAA
AACACAACGGCAACTAATTCAACAATTACAACGAACACCCCCACAACTAC
AAAGACCACCCCtacaacgacaacgaccacccccACAACGACAACGATCA
CCCCTACTACCACAACGACCACCACTACACAACCCCCAAGTGCCTCTCCG
TCAATCTACAACATGACTTTCAGCGCCATCAATGAAACTTCTTACTGCAA
TGGTAATGGATATTTATTCCAAAGCGCTGATGGAACAACAAAATTATGCA
GTTGTTTCGAAGATTTCCATGGTCTTCAGTGTGAGGATAAAGTCAATACA
TGGTTACTGAAAATCGTTTTCGCTTTGGCAATCTTGGCCGTCATCTTCTT
GATCGCTGCAATTTTCACTGGTTGCCAATGGCATTCTCGACTAGGAGACA
TCGAAGAAAAAGAAGCTAAAGTGAAAAATTTAGCACACGAGAAAGATCAA
CTCAAAAAGCAGAATTTAGACCTCCGACGTCGCTCACCGTCCCCATCAGG
CCGACCAAGGTCTAACTATGCGCCCTCGAATTACGCCCCTTCAGTCGTGG
GTAGTCCCAATGGTGGGTTTTATGACGATGACAGACGATCAGTAATGGAT
ATGAGCATGCCCACATTTGATGCCATGCAACAAAAAAGGCTGAGTCAGCA
ATTTACAGCCAATGGGGACGTTGCCTTGGAGATGGAGGAGGACGAGTTGG
ACGCAACACCCAACGAAAACAAAGATGGTGGAAATATGTTGAACCCTGAT
ACTGTCTCAATACATTCAGCATCAACGACCAACAGTGAAATGGTTCTCAT
TCCCAAATCCCCAAGAAATAATAAACAAAGGCGTCCAGTATCTCAAGAAA
TCCCTTCAAACGCCATCATTGATAATCGTGGGTATATGGTTCAACCAAGA
GGAGCTCGTAGTCGATCCCCAAGTCCTACCAATAGTCATCATTCAGATTT
AAGTATGGAAAACATGAAACAATTTGATCGAAATGGTGGCTTGATGGAAC
CTCAACGTGGGCGAGCAAGAAGTTTGATGGATTTAAGAGTAATCGCTTTG
ACTGGTGAAGCTCAGAAATATCCAGGTGAAACACCGGGATCAAATTTATA
TAAATCTAAAAgtattgaaaacattttaacaGGACAAGTGCATAAACTAT
CACCTCAAGCACCTTCTTCCAATGTGTCGACCAGCTCTGGAGGAAGAGGC
CGACCAATGGGTATCTTTGCACAACAGCAACAACGAGACATGGCTGATTC
CGCGTTTTGAATGAACAAGATGAAACAATGGAATATTTTACAACTGATTG
TTCTACTATCACTCTCCATGTTGCTCAATGCACAAAACATAACAACAACA
CAAATCAACTCCACCACCACAACCACAGCTGCACCACCTATTGTCTCTGA
ACAAAATACTACGACATCAACGACCATTCCACCTTCGACAACAACCACCT
CTGCCCCAGAAACAACTACCTCCAATCTATCGACAACCACCCCTGTTCCA
TCAACGACTACCCATTTCCCTGAGACCACCACCCCTGCCGCAGCAACAAC
AACGACCTTACCACCACCGGTAACAACGATTACTCTCCAATCAAACTCTT
CGGAAAACACAACGGCAACTAATTCAACAATTACAACGAACACCCCCACA
ACTACAAAGACCACCCCtacaacgacaacgaccacccccACAACGACAAC
GATCACCCCTACTACCACAACGACCACCACTACACAACCCCCAAGTGCCT
CTCCGTCAATCTACAACATGACTTTCAGCGCCATCAATGAAACTTCTTAC
TGCAATGGTAATGGATATTTATTCCAAAGCGCTGATGGAACAACAAAATT
ATGCAGTTGTTTCGAAGATTTCCATGGTCTTCAGTGTGAGGATAAAGTCA
ATACATGGTTACTGAAAATCGTTTTCGCTTTGGCAATCTTGGCCGTCATC
TTCTTGATCGCTGCAATTTTCACTGGTTGCCAATGGCATTCTCGACTAGG
AGACATCGAAGAAAAAGAAGCTAAAGTGAAAAATTTAGCACACGAGAAAG
ATCAACTCAAAAAGCAGAATTTAGACCTCCGACGTCGCTCACCGTCCCCA
TCAGGCCGACCAAGGTCTAACTATGCGCCCTCGAATTACGCCCCTTCAGT
CGTGGGTAGTCCCAATGGTGGGTTTTATGACGATGACAGACGATCAGTAA
TGGATATGAGCATGCCCACATTTGATGCCATGCAACAAAAAAGGCTGAGT
CAGCAATTTACAGCCAATGGGGACGTTGCCTTGGAGATGGAGGAGGACGA
GTTGGACGCAACACCCAACGAAAACAAAGATGGTGGAAATATGTTGAACC
CTGATACTGTCTCAATACATTCAGCATCAACGACCAACAGTGAAATGGTT
CTCATTCCCAAATCCCCAAGAAATAATAAACAAAGGCGTCCAGTATCTCA
AGAAATCCCTTCAAACGCCATCATTGATAATCGTGGGTATATGGTTCAAC
CAAGAGGAGCTCGTAGTCGATCCCCAAGTCCTACCAATAGTCATCATTCA
GATTTAAGTATGGAAAACATGAAACAATTTGATCGAAATGGTGGCTTGAT
GGAACCTCAACGTGGGCGAGCAAGAAGTTTGATGGATTTAAGAGTAATCG
CTTTGACTGGTGAAGCTCAGAAATATCCAGGTGAAACACCGGGATCAAAT
TTATATAAATCTAAAAgtattgaaaacattttaacaGGACAAGTGCATAA
ACTATCACCTCAAGCACCTTCTTCCAATGTGTCGACCAGCTCTGGAGGAA
GAGGCCGACCAATGGGTATCTTTGCACAACAGCAACAACGAGACATGGCT
GATTCCGCGTTTTGAATGAACAAGATGAAACAATGGAATATTTTACAACT
GATTGTTCTACTATCACTCTCCATGTTGCTCAATGCACAAAACATAACAA
CAACACAAATCAACTCCACCACCACAACCACAGCTGCACCACCTATTGTC
TCTGAACAAAATACTACGACATCAACGACCATTCCACCTTCGACAACAAC
CACCTCTGCCCCAGAAACAACTACCTCCAATCTATCGACAACCACCCCTG
TTCCATCAACGACTACCCATTTCCCTGAGACCACCACCCCTGCCGCAGCA
ACAACAACGACCTTACCACCACCGGTAACAACGATTACTCTCCAATCAAA
CTCTTCGGAAAACACAACGGCAACTAATTCAACAATTACAACGAACACCC
CCACAACTACAAAGACCACCCCtacaacgacaacgaccacccccACAACG
ACAACGATCACCCCTACTACCACAACGACCACCACTACACAACCCCCAAG
TGCCTCTCCGTCAATCTACAACATGACTTTCAGCGCCATCAATGAAACTT
CTTACTGCAATGGTAATGGATATTTATTCCAAAGCGCTGATGGAACAACA
AAATTATGCAGTTGTTTCGAAGATTTCCATGGTCTTCAGTGTGAGGATAA
AGTCAATACATGGTTACTGAAAATCGTTTTCGCTTTGGCAATCTTGGCCG
TCATCTTCTTGATCGCTGCAATTTTCACTGGTTGCCAATGGCATTCTCGA
CTAGGAGACATCGAAGAAAAAGAAGCTAAAGTGAAAAATTTAGCACACGA
GAAAGATCAACTCAAAAAGCAGAATTTAGACCTCCGACGTCGCTCACCGT
CCCCATCAGGCCGACCAAGGTCTAACTATGCGCCCTCGAATTACGCCCCT
TCAGTCGTGGGTAGTCCCAATGGTGGGTTTTATGACGATGACAGACGATC
AGTAATGGATATGAGCATGCCCACATTTGATGCCATGCAACAAAAAAGGC
TGAGTCAGCAATTTACAGCCAATGGGGACGTTGCCTTGGAGATGGAGGAG
GACGAGTTGGACGCAACACCCAACGAAAACAAAGATGGTGGAAATATGTT
GAACCCTGATACTGTCTCAATACATTCAGCATCAACGACCAACAGTGAAA
TGGTTCTCATTCCCAAATCCCCAAGAAATAATAAACAAAGGCGTCCAGTA
TCTCAAGAAATCCCTTCAAACGCCATCATTGATAATCGTGGGTATATGGT
TCAACCAAGAGGAGCTCGTAGTCGATCCCCAAGTCCTACCAATAGTCATC
ATTCAGATTTAAGTATGGAAAACATGAAACAATTTGATCGAAATGGTGGC
TTGATGGAACCTCAACGTGGGCGAGCAAGAAGTTTGATGGATTTAAGAGT
AATCGCTTTGACTGGTGAAGCTCAGAAATATCCAGGTGAAACACCGGGAT
CAAATTTATATAAATCTAAAAgtattgaaaacattttaacaGGACAAGTG
CATAAACTATCACCTCAAGCACCTTCTTCCAATGTGTCGACCAGCTCTGG
AGGAAGAGGCCGACCAATGGGTATCTTTGCACAACAGCAACAACGAGACA
TGGCTGATTCCGCGTTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009717XLOC_009717Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017358-exon-sc0000266-1491911889:86011..86110TCONS_00017358-exon-sc0000266-1491911889:86011..86110Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1510915933:86011..86110TCONS_00017358-exon-sc0000266-1510915933:86011..86110Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1575043694:86011..86110TCONS_00017358-exon-sc0000266-1575043694:86011..86110Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1491911889:86242..86884TCONS_00017358-exon-sc0000266-1491911889:86242..86884Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1510915933:86242..86884TCONS_00017358-exon-sc0000266-1510915933:86242..86884Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1575043694:86242..86884TCONS_00017358-exon-sc0000266-1575043694:86242..86884Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1491911889:87243..87336TCONS_00017358-exon-sc0000266-1491911889:87243..87336Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1510915933:87243..87336TCONS_00017358-exon-sc0000266-1510915933:87243..87336Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1575043694:87243..87336TCONS_00017358-exon-sc0000266-1575043694:87243..87336Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1491911889:87615..88709TCONS_00017358-exon-sc0000266-1491911889:87615..88709Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1510915933:87615..88709TCONS_00017358-exon-sc0000266-1510915933:87615..88709Clytia hemisphaericaexon
TCONS_00017358-exon-sc0000266-1575043694:87615..88709TCONS_00017358-exon-sc0000266-1575043694:87615..88709Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017358-proteinTCONS_00017358-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000266supercontigsc0000266:86011..88709 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.05636	4.05599	2.09824	1.80191	2.22141	1.60179	1.08538	1.09047	0.364379	2.87999	1.02219	6.89778	40.0693	21.4888	86.8487	29.6495	12.3659	33.8571	0.328325	0.595519	0.0398165	0.145658	0.873528	1.28783	0.110537	0.355144	5.50561	0.391716	0.205686	0.279416
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013032EGF-like_CS
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017358 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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