TCONS_00017358-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00017358-protein
Unique Name	TCONS_00017358-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	534

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00017358-protein ID=TCONS_00017358-protein|Name=TCONS_00017358-protein|organism=Clytia hemisphaerica|type=polypeptide|length=534bp
MNKMKQWNILQLIVLLSLSMLLNAQNITTTQINSTTTTTAAPPIVSEQNT
TTSTTIPPSTTTTSAPETTTSNLSTTTPVPSTTTHFPETTTPAAATTTTL
PPPVTTITLQSNSSENTTATNSTITTNTPTTTKTTPTTTTTTPTTTTITP
TTTTTTTTQPPSASPSIYNMTFSAINETSYCNGNGYLFQSADGTTKLCSC
FEDFHGLQCEDKVNTWLLKIVFALAILAVIFLIAAIFTGCQWHSRLGDIE
EKEAKVKNLAHEKDQLKKQNLDLRRRSPSPSGRPRSNYAPSNYAPSVVGS
PNGGFYDDDRRSVMDMSMPTFDAMQQKRLSQQFTANGDVALEMEEDELDA
TPNENKDGGNMLNPDTVSIHSASTTNSEMVLIPKSPRNNKQRRPVSQEIP
SNAIIDNRGYMVQPRGARSRSPSPTNSHHSDLSMENMKQFDRNGGLMEPQ
RGRARSLMDLRVIALTGEAQKYPGETPGSNLYKSKSIENILTGQVHKLSP
QAPSSNVSTSSGGRGRPMGIFAQQQQRDMADSAF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009717	XLOC_009717	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00017358	TCONS_00017358	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013032	EGF-like_CS

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 249..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 495..534
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..432
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..311
IPR013032	EGF-like, conserved site	PROSITE	PS00022	EGF_1	coord: 198..209

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00017358-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00017358-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00017358-protein (polypeptide) - C. hemisphaerica