TCONS_00017288 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017288
Unique NameTCONS_00017288
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2293

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017288 ID=TCONS_00017288|Name=TCONS_00017288|organism=Clytia hemisphaerica|type=transcript|length=2293bp
ctgttatcaggttagccCTAGCTCAGCTCTATGGTATTCTTAAAAAGCCT
TCACgggtctcaaatattttgtgtcTAAGTTTgagttgttattttttttc
ggataattgaatcatttttttcatcattaatttgcagttaaaaattgata
aaatagccgaagaaaaatttaaatgtgGAATATGGATAGTTTGTTTGCTC
GATTTTTCGATGGAAATTTATTCATGGATCAACACAGCATGTTTCCCGTG
TCCGTCAGTCAAAAGAGTAAATCGAGTGCTCTCAAAACCCCCGGACActa
tttgtttgaaatttttgtccgAGTCATGAGGATGAGGCAGAAGACGGGAC
GCGGACGTTTCTTGTTCGGTCCATCACCCAATCATTCTTTCGGACCAAAA
GCTTCTTTATCTTCTGGTACACCGGAACCCTACGATGGAGAGTGGAGAGA
CATAGGGATGATTGATCCATCCAACCAGCATTTGGAATGGCATTCTCCAC
CGCAAAACGTATTGATCATCAAGAAACACATGGACCAAGATGTCACcaaa
caattcaaagaaatgGTCAAATGGCTCATGACTGAGAAAGTGATGACAAT
AATTGTCGAAGAGAACGTTTTGTGTGAAGAATTAGTCGCGTTCGATGAAG
ACTTCCAAACCTACTCTCAAAAAATCAAACCGTTCAAAGCAGAGAACGGC
AATGCACGCCCTTCCGTCGATTTGATCGTTTGTCTTGGTGGAGATGGTAC
TCTTATCCATGTTTCATCGCTGTTTCAGAGCCAATGTCCACCGGTCATCG
CCTTCCATATGGGCTCATTAGGTTTCTTGACGCCTTTCAGTACAAGCTCT
TACAAAGAGGATATCCAAGCTGTCATGGATGcAAACCTTGGCTTATCACT
TCGAAGTCGTTTGAAATGTCAAGTTCGACGAATGAGTGAATCTGGTGTTG
ACGAAGTCGAAAGCGAATTCTTGGTGTTAAACGAAGTCGTGGTCGATCGT
GGTACGTCCTCTTCCGTCACGCACGTCGAGATTTATTGCAACGGACGTTT
CTTGACAACACTTTTAGGTGATGGTCTGATAATTTCCACGCCAACCGGAA
GTACCGCTTACTCCATGTCTGCTGGCGCCTCCTTGGTGCACCCGAGTGTT
CCGGGAATTATTGTGACACCCATTTGCCCGCATTCTCTATCTTTCCGACC
GATCGTTCTACCGGCTGGTGTCGAGCTCaagATCATCGTGTCAACGGAGA
GCCGTAACTTCACACCAATGTGCTCATTTGACGGACGCAACCCAAAAGaa
atgaacaaaacaaaataTTTACGCGTGACAACGTCTATCTATCCTATCCC
ATGTATCAGTCACGAAGATCATTTGGGAGATTGGTTCAACAGTTTAGGAG
AATGTTTACATTGGAATCGCCGTGAAACGAAGCGAACTTCTTCATTCAAA
CGCCAACAAAAAGCTGTCAATGGCCAACGGTAATCCGATCGGGATAAATA
CTCTACGTTTCGGGATTATATCCCGCTGTTATATTACCCCGATTTGGTAA
TCATGAGATGGAATCGCCTGTTTTCGGGTTGTGAATCCCGTTTATGAAAA
TGGTTTGACTCAGTCAGGAAGTCAATCCTACCAACGAACGTTTAGATAAA
CGacaaaaatttgtttgaaaatgaaaagctATTTTACAGACGTTTAAAAA
CTCgtaaaaaatcaaatgttttaaCAGAGAGacaactgaaaaaaaacaaa
tcttcaaatattgaattaaatccacaaaattatattttaaatttggaaaa
CAAATGTGTACATATTATTTTTATAACATTATAACTTGTTGGATATATAT
tactgataatttttttaacaatcatTCCTTCTTTTTTTATATCATTCATG
ATTCACTTGTATCCAGcttcttctttattttgtttcctaatttttctttc
aatggTAAAACTATTAAAATGATCAGATCTCTTCAAAATGATAAAACTAA
TTTCTAACCTTAACGTTTTTAATAACCGATAAATCTAATTTTCTATCACG
CAATGTATTACTCGCTCATTCGTCTTCTCTTCAATTTTTTCAGTCTTTTT
ATTTCCAACTTCCAACAAAAATTTGGGCCGGTTCCAAAGTATATTTATTG
CATTATTTAGATTTTAGGGAATTTAAAACGGGTTaagtttttttgtaaat
ttttttggacttttattCGAGCCTTTTTGTACGTAGATATTTAGTTTTGA
AATACCCTAATTGAAAGTAATAATGAACAATTTAACATAATTA
Run BLAST on NCBI

transcript from alignment at sc0000264:337348..350098+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017288 ID=TCONS_00017288|Name=TCONS_00017288|organism=Clytia hemisphaerica|type=transcript|length=12751bp|location=Sequence derived from alignment at sc0000264:337348..350098+ (Clytia hemisphaerica)
ctgttatcaggttagccCTAGCTCAGCTCTATGGTATTCTTAAAAAGCCT
TCACgggtctcaaatattttgtgtcTAAGTTTgagttgttattttttttc
ggataattgaatcatttttttcatcattaatttgcagttaaaaattgata
aaatagccgaagaaaaatttaaatgtgGAATATGGATAGTTTGTTTGCTC
GATTTTTCGATGGAAATTTATTCATGGATCAACACAGCATGTTTCCCGTG
TCCGTCAGTCAAAAGAGTAAATCGAGTGCTCTCAAAACCCCCGGACActa
tttgtttgaaatttttgtccgAGTCATGAGGATGAGGTATAGATTGACTT
ATTATTCATGTTCTTgttaatagatcttatcggagtttttgatttttcta
aaaaagcgatgcattttgggattgtttcgggagtaagttacaatagaatt
ccctcgaggaattcctaagagatttctattgtaatactcccgaaacaatc
tttTTTCTGACTGTCAAGAGACTTTGTCGTTCTTACATAAAAGCGCAGTG
CTTATTAGTGCTGTagattacacccccttctcacagacccagcaggtttt
tttcagccagtggaggtaagaataacggaccaaaactcgatggggattga
tattcccatgtatTTTatagctggggatttgaattccattgttttcgagc
cagaaaattcagtggggatgaaaaaaataaagttttggagtgaggattgg
tttatctgattaatttcagtggggacaaaaattagagtatagtTTTCCAC
tgaggacgatattttggccaatttttccattgaGAAGGGGTCCAaggtgg
gtctgtgagaagggaatgTTAGATTACAATTGAATTATCGAACAACTATC
TGGTTACTCAAGAAGAGGGTCACAACAAGTCTTGCAGTCTTATGAGTCGC
GGGAagtaaaggaagaaattttggcgggaatttaatttggcggatggccg
aaaaagttttttagagggaatttaatttggtggacggtcgaaaaaactaa
atttggcgggaatttaatttggcgtttgctgaaaaatttatccttaaaat
ggcgtaaaaacagcaagaaaaatgcaaaaacaccttaaaagagatcatat
tttcaagaagtttaatttggcgggaatttaatttggtggatggcggaaaa
aagaaattttggcgggaacttaatttggcggatcccgccaaattttctta
ccgccaaaatttcttcctttaaggtacccGCATAATAAGCCTGAGAGGGG
AAAGAATCTAATTTTTTAATGAAGCACTTGCTGGAAACCGTTATCTTTTT
GAGTGTCAATTTATAATTCTATGTCAAATGGATGATTTGTATTTAAACAT
CTCTTCACATCTCACAGTGATCTAAAAACGGTCAATTTTAATCTATATAA
GCGATCTCGCTACGTTATTTTACTTTGAGGAAGTCACAATAAACTTTCCG
CAAGCTGAGCTTAAAATTCTCGAAACTCCTCTTTCATTATGACAATTATC
GAGATGTTGTCGCGTGACTTGAACCCCTTAATTATAGGAAATCAGTTTGA
TTATATTATAAACACTAAATTCCTGAAACCGTTGACGAAACTATACCCCA
AAATAAGCTCTAGgctatttaatttttctaataatGAAATAATTAGTAAT
TTTCGTATCATTTTATTCTCATTAACTTGTCTTTGAATATCTCCAAAAGT
CAGCTAAATCGCTTCCAGCGAATTTTATAAATCTTCGATAGAACATCCAA
GATTTTTGAATCCtttggatgctcttaacttttcgagttttgagcctaaa
aatgttgttAACATGAACATTTGTGTCCATTGtcctaagaaatcgagtgt
tttagagtctgcaaggCCTTAAAATGcccttaaaaaataaaaacttgtcc
ttaacattttggccatcgaagccttgtggttttatatagtttgttctttt
taaaAACGTGCAATGAACTAAGTTTTTACTAACCTCCTTCTTGGTGTTCT
TCTTCTTTCAACAGGCAGAAGACGGGACGCGGACGTTTCTTGTTCGGTCC
ATCACCCAATCATTCTTTCGGACCAAAAGCTTCTTTATCTTCTGGTACAC
CGGAACCCTACGATGGAGAGTGGAGAGACATGTAAGTGCTTCTTTTAGTG
TACTGGGTGTCACGAAAAAAGTATCATATCGAAAAAAAGTAAGAATGTCG
TGtttctctcttttctttttttagtagTACGCTATAATACAAAGCACACA
AAAAATTTCTACTCGAAGATGTGTTTTGATATTGCACCTTTTTTCctgga
caccctgtatatcATTTTCTACTCCCATAATTGGGTACCCTGAGTTGTGT
TAATTTGATATCAGGCTAAATAGTACGCCCAATATTGCACGAGTATTAGG
TCATTACAAACCTACCTTAAAATCTATCACTTATTCCCAAAACAATTAGA
TGTGCTGTTTCATTACTTTCATGAATTTGATTAAATTGTTACCTAAACCA
TATTGGACGGACGCCCATTTAGAGATTTGGGCGTAGTTCAAATAAGGTGG
CTAGTGCTGTTCCAGAGTTTTTAAAAGACGGTTACCTAAAACTTTTACTT
ACTTGTTGAGCTTGAAGTAGTAGTCCCTTTTGTCCCTGGTCTGTTTGTCT
GTCTATGTGTTGTAGTATGTACCGCTCGATCAGGTCGCTCGCTGCTATTC
AACTGAATGGCCTTCCATCTCGAGATAAATACATGTCACTTGAACATGAT
TGCATCATCAAAAGTAATCCTAATCCTTCACGAAAGCACAGTGTAATGAA
GTTAAAACCTTTAATCCCCTCATTAACAAAATATCATCACAAGATGTTCA
TTGGAGGGGAAAACAAAAATGACGTGCCATAAGGCTCGACTGTTGGGGAA
AAACCAACTCAACATAAGAAAAGTTTTCCGCTTTTTAAAACCCTCTCCGA
CAGATTCAAAACAAAAGTGAATGCTTCAAAGGCAGGCCTGGAAGCTAACC
ACTATGTATTGAGTCGTGTCTATTCAGCAAACTTATGCAATTAAACTACG
TTCCTGACAACGCCTCTTTCTCATGGGAATCTCCGACTCATTCTCCGAGT
TGTTCTACTTCTATTTCTAAATCTATAGTTTTTACGTATATAGTGAGTAG
TTATTCTGATatagtttgaaaatattgaaaaaatttatattcaaaCTTTA
TAAACGCAATTCTCAGCTCGCACTAGCTTTCTTTGTAAACAAAATCTCAA
AGTAAACACCCAACATAATTTTACTAAGTAGAACCAGGGGGGTTATAATG
ACTCATTCAAAGAATTAGGTTTTGCCAGGGAAAGACCCAATCTTGACTTC
CAAGTATCTAAATGATGAAGTGACAAGTGGATCAGAGGTCAGATCGTATT
CGATATATATTTTGCGCTTCAGAGGGATTCTTTCCTTCTTTCACTTTTCT
TTCATACCGTTCGCCCAATAATGGTTACTGATTTAAGTCATACTTAGATT
GTCCTTAAAGActttgtttgtatattttcgGATTGTAGCTGTAGCTTTGT
TGTTGGATTGCTGCTAGGTGTggtgatgaaaaatgaaagcatTTTATGCA
CCTNcccccccccccccctcctaaCATGATAAAGGTTTTCCGCTTTTTAA
AAGTCTAACTTTCCCAAACATGGTAATGGGCATGCAACCTTTCTGGCGAC
TTTTTTCTTTGGGATTCCTCAAATCGATTCTTCAGgtggttgaaatttgg
acttGAATGTTTTCTTCACATTTCAATGACACGTTGGtgtgttttaaaaa
taatcCTCCATAATCTTTATATCAAAACGATTTCTATTTCTTAATAACTA
TCCGTACAACAACTTTTCGAACTGCCATCCATTGTTTCCTTGCCTGATTG
CTGTTTTCCCTCGTTCGGTGTTTTCGTTGTGTGTAGATGCTCAGGCTAGA
TCACTCTGCTACCACTACACTGGATACACGTCATTTAAACTTGATTGCAT
CATCAAAAGAAATCCCAATCCTTCACGAAAGCACAGTGtaattaatttaa
aatcttttaatccCTTTATTAACAAAATACCATCACAAGATGTTCATTAC
AGTGGAAAACAAAAATGACGTGCCATAAGGCTAGACTGTTGGGGAAAAAC
CAACTCAACATAAGAAAAGTTTTCCGCTTTTTAAAACCCTCTCCGACAGA
TTCAAAACAAAAGTGAATGCTTCAAAGGCAGGCCTGGAAGCTAACCACTA
TGTATTGAGTCGTGTCTATTCAGCAAACTTATGCAATTAAACTACGTTCC
TGACAACGCCTCTTTCTCATGGGAATCTCCGACTCATTCTCCGAGTTGTT
CTACTTCTATTTCTAAATCTATAGTTTTTACGTATATAGTGAGTAGTTAT
TCTGATatagtttgaaaatattgaaaaaatttatattcaaaCTTTATAAA
CGCAATTCTCAGCTCGCACTAGCTTTCTTTGTAAACAAAATCTCAAAGTA
AACACCCAACATAATTTTACTAAGTAGAACCAGGGGGGTTATAATGACTC
ATTCAAAGAATTAGGTTTTGCCAGGGAAAGACCCAACCTTGACTTCCAAG
TATCTAAATGATGAAGTGACAAGTGGATCAGAGGTCAGATCGTATTCGAT
ATATATTTTGCGCTTCAGAGGGATTCTTTCCTTCTTTCACTTTTCTTTCA
TACCGTTCGCCCAATAATGGTTACTGATTTAAGTCATACTTAGATTGTCC
TTAAAGActttgtttgtatattttcgGATTGTAGCTGTAGCTTTGTTGTT
GGATTGCTGCTAGGTGTggtgatgaaaaatgaaagcatTTTATGCACCTA
CAAAACACGTTGTTTGCTTTATTCGACTTGTTGTCAGATAACCAGGATAG
ATGTAATTAACTACGTGTGTGGTTGTTTACTAGTACTGCCATCGTACTAG
TACTTATTTGGGAGCAAATTTTTAACCCTTCCTTCTCGCATACCTTTTCT
TTGGTAGAAATTCTTTCTCTACTAGTACTGCTCTAAAGTCCTTCATCTAT
CAAATGGTCCAATTTAGTGTCAGTGTCAAGACTTCGATTCACCCCGATGA
AATCACCAGTAAAAATTCCAGTAGATACCCGGCGTTTTGTTTGGGACTTT
GTCAATAGACGGTTGTAAAGTACTAGTAGCGGGCTGAAATGTGAAATTAT
ACTGTTTGAATCTAGTACTTCAATCACCATGATTATCTAAATTATCTCTC
AGATGTCACGTCTTCAGGAAAAACCTCGTCCAGAACTCCTTTCGTAGAAA
ATTTGTGCTTTTGCCATCAAATAACATAGATCTACTAGTAAAAGGCTGTT
ATGTGAAGTACCTGTCTAACCTTTTTGTCGCTTCGGATAGCGTTTTACTT
TTGGCAATGTCCATTCTTTTTTCTCCAGGATTTAATTCTTTGGGATTTCG
TAGAGTATCCTCAAATCCTTGATCAGGAAAGCTCTCCCAAATACGACCAA
AAGATGCAAGAAAGTTAGCAATTCTTGAAATTCTTAACCTATTGCACCAA
CAATCGTCATACTTTAAAGAATTTTCATCAGCTTGAAAAATTCTAAGTGg
aaaataaatctacaggttATAAGACATTTGCAGGATGTTCTGGAATTCAT
AATTGTCCTCATAAGAGCCTTGAATGTTACCCAGGTATTGCACCACTTTG
CCCCATTCCGTTATTCCCAGTCCCCTATGGCAAATCACATGGTGGCGAGA
CAACCGCACCCGAAACATCCAACAAATAGGTATTAAATCCGATATTGAAA
AGATGTAAGATTAACATGGTCAGCAAAAGTAGTGGTGTAACTATGAAGCA
ATAGTTAGATCAAAAATGACGAAATCATTGTAGAGAGGAGAGAGTTATTT
AACCATGTCATTATCTGGTGATTTAATTGTCCGGCGCTACCGAATACATT
ACTAGTTCTCATTTCTTATTGAATATCAAAGAATGTTAAAATGAGTATTT
AAACAAAAAGTCATATGCTTATATAATgctgaataaaaagaaagatatct
attgttttgattgagATAATATTTCCCTCTTTTATGCAAAGCAAGTCCCA
CAACGATTCGTATAAATAGATGGAGAGCTCCATAACGGCTTCATCAATGA
AGCGTAGGACTACTAGCAactcctttcagaaaaaaaatatacatcTCAGT
TGTATACAATTTTAATCAATTCGATCTTAAATGCTGTTTTATTTATTTCG
ATTGAGGTTTTGCTGAGAATTTTTTGTACGTCGTGTAGCTGCTTCTAGAA
ACCACcgttaaacaatttttttgcagCAGTTGTAAGCTGCAGGCTTTGCA
AAATTGTCGTTACTACTGGTTTTTTTGTGACCTTTCATAAAAATTGCTGA
TTCTGTAAGATTGGAATTACTATTTCGGACATATAATAGAGGAGAAATTT
TACTGGTCAATTGTTGGATTCATCAAAGTGTTTTTGTTGTTAGTGTGGAA
AGGATTGGATATTATAATGACCATTTTACCATTCGCCGAAAGTAAATTTA
AAGTACCCAAAGATAATTTCGAATTCTTGTAAGCATTTCTACTTTTTGTT
TGATGAAAGTATTTCAGGTGTGATTTGTGAGCTCGAATCAATTCATTCTT
TGCAACCCATCAATCAGGCTTCAGTTTTGAATCGTGAAAAAGCCTGAAGT
TTGAGCACTCTTCCATCTATCAGTTAATCATGGATTCTTTCTTTCATATC
CATTAGAATGATGACTTTGATTCTCTCCGATCTTTATCGTTCATAGCTCT
GTATTTTTCTTTCTTACCTGCGAAAACCATGATTTCACCTTTTTTTAACC
TTCCTATTCATCAAAAGGATGACTTTAACATATCTGTTTATTTCTCATCT
ATCAGAGGGATGATTGATCCATCCAACCAGCATTTGGAATGGCATTCTCC
ACCGCAAAACGTATTGATCATCAAGAAACACATGGACCAAGATGTCACca
aacaattcaaagaaatgGTCAAATGGCTCATGACTGTAAGTTTCTCTCTG
CTATCCTCCTCTTTATTTTCCTAATAGTCCCCCAGTGGTATCTCTGGTGA
CAGTTTGCTCAAAAAATCGCACAAATGGCTCATTGCAGCTCATTGTTGTA
ACTTGCCTCCTCAGATTCTTCTAGaccattttattaaaaaaaaaggcgAA
TAGAATGACCCATGAGCAAGCGTTATAAGACACATTGTATAAAAGTGCTG
ACTGGATTGGAGGAAATGACATGTACTGACCTAATCATATGGTATTTTCT
AATTATTGACCTGTTGTAGATTCCCCATACGAGAAAACCTGATTTAATAC
TCCTTATTATTTCGAGTTCTTTATATGATTCCGTTTGGTTGTGATCTCAT
TTCATGATGCAAACTTCcaagtgaaaattttttttttgggtcTTATTATT
TTTTGCTCTTGTCAGGAATTTTTCGTTATGGGTCTTTTGAAACAGTGCTG
AAATGATAGCTTATCTATGAGGCTTGCACCTACTTACGATGAAATTAATC
GAATTAATGGGCTATCAACACGGTCATAATTGGGGTCGAATATCTTTCTC
CTTGATTTAATTGAATCAgcataatttaatttaatttaaaggggaactaa
acattttttgatgTCATGCTTTTTTTTCCTCCCAGTAATACATCATATAG
TAGAACTTCAAattaatagctttaaaaagttcagtttttagtggaaaatt
ttttcagaggtcatttttgaaaaatatgaaaaaaatgttaatttcccATT
TAAATTGTTGTCCGAAACACACTATTGTAAAATGTATGTAAATTTTATCG
TGGTAAAATAAAGCCAAGCCTGAGCTAAGATagtatttttgtttgttttt
ggaaGATCCTCGATGAGTCAAGTGACTGGAACCCACGTGCTTAATATATT
AATCAAAATATAAGTCATCTCTCGAGTCAGCATTTTAAACACTGGATGTG
CCTCTGAAATTCTTACTCACAGGAAAATCTACATTATTAGAAAAAGCCAT
TTATTTTCTTCCTCGAAACGGTGGTCTAGAAAAATCTGATAGTTTTACGC
TGTCATCATTTCCTTCCCAGAAAATTAAAGTATGATGTGATTTTCTTCGA
GATGGTTAAATGTTTAGATACTTAGCATTTCCTCAATTATATTTATTCAT
AATGGGGGATATTGAAAAATACGTTTAGAAAAAATTGTCATTCTTCATAT
GTATCAAACAAGGAAGGAAAATTAGTTacaaattttttatataatgtGAT
TGCTCATTCCTTCTGTCGGCTTCCGTGCATTTTGATATCATTTATGCATT
TTCATACATGTGAAACTATTTGATGgcacaattttttttgcatgcCTACG
TTTCCCTTTTCATGGTAAATTTAAATACTTTTTACGGTACTTTACTTTTG
CATTATGAAAGTCACTATTAAGTAATTTTACCACGTAAATATAGAAATAA
TCAAAACCGCCACCTCTTAAGACCACCCATATCAGATATATCTTCCTTAC
ATAATACAATCTGGGATAAAACTTGTTCCACCTTTAAAAATTCTCGGATC
GTATGCAAACTATCAAGCATATAAATTTTGCGTTAGTTTTCCAAACTCCA
GTTAAACCAGTGCTGAATCGCTAGCCTCTAGAAAACTacaggagcacgaa
tccgttagtggaaaCAAGCAGTCTAGAGTTACCAGAATGATCTAAAATTG
GAATACGACCTTGTTTTTTTTAGGAGAAAGTGATGACAATAATTGTCGAA
GAGAACGTTTTGTGTGAAGAATTAGTCGCGTTCGATGAAGACTTCCAAAC
CTACTCTCAAAAAATCAAACCGTTCAAAGCAGGTAAAACACATTTTCAGT
TCGTTAGCTTTTTCTGAGGAGAGGTAACTAGCATCAAATCAGCAAAACTC
TCACATAATTACAAACCGTACCTCTAAAATGAGTTCTacctaaaattttc
aatttgctaATTTCacaaagatatttattttaatttctcGTGACTTCCCC
TGAGACGCACGTGGATTAAATTATTTCTCCTAGTAAAAGGGGATTTACAT
CTCCATCATACTCTATCCACACATCTCACTATTATCTCCATCATCTGTTT
AATTTATTCACAGCAGTAATCCTATTAAAAGAGCATAGTTTAGTTTGTGT
ATTTATTTTTGATCGAATCTATAAAACTAACAAACTTACTCCCACCTCTG
CGGTGTCATCTCTAGTTTCTAGAGCTCTTGACTCAGCGCGTGATCATATT
CAGGGTATTCCCTTTTTAGACTTACTTAGTTGACGCTGTCTAATTCCATT
GTTTGAtgcgctccattattcgataatattgagtcaacaagaaactctac
TAAACGATTCTCTACCATTCGCTACGCTTCCTCATCCGATGAAAATCCag
ttccccttgaaaatcgaattggaTAGCGTCAACTGTACTATAAGTATTTC
AATGGAATTTAGACATCATTTTCACTTCTTTTCTTCCCCTTAGAGAACGG
CAATGCACGCCCTTCCGTCGATTTGATCGTTTGTCTTGGTGGAGATGGTA
CTCTTATCCATGTTTCATCGCTGTTTCAGGTATGATGAAGAAATTGAATT
TACTTGCACTTTTCATTCACGATACGAATTGAGTTTTCCCGGTCAATAGC
TAGACTATAAGCCGAATTTTTCGTTTATTTACCGGTAAAGTTCACTGCTT
ATTTCATCTGATACATtcctagcctgtaccaaactcgaAAAGAACCGAAA
AATACACACggcaagatttttcaaaaaacctcCCACGTGTGTTCGGGGTA
CATTCCTCGAAAGCCTCTTTTCCTATCATAGTCATCGGACACGAACAATT
TATTGATGAAATGTTCTTTCTTCCTTTCTTACAGAGCCAATGTCCACCGG
TCATCGCCTTCCATATGGGCTCATTAGGTTTCTTGACGCCTTTCAGTACA
AGCTCTTACAAAGAGGATATCCAAGCTGTCATGGATGGTATGTTATTATC
TGAAACCATCCTGCACATAAGCATGTTTTCCTGCCCTTATATAGTTCAGG
GAAAAAACGTCCAATACTTTCTTTGATATAACTGATCACCAGCGTTTGTC
ATCCAAAAGTTACTCCtttatgaaattgaatttgtatCAAACTCTATTTG
ATGCTAAACTTGGATTTCTGAACCAATCAATTTCAACatgtttaatttct
ttttctttatagcAAACCTTGGCTTATCACTTCGAAGTCGTTTGAAATGT
CAAGTTCGACGAATGAGTGAATCTGGTGTTGACGAAGTCGAAAGCGAATT
CTTGGTAAGATATTTTCTGTTCTTTATTTTGGGTTTTATGCTCTTTCTTG
TGGCTTTGAGTTTATGCTAATTATGCTTTTTATGAATATTACATCGAGTA
TGAAttgtcagaaaatatagcacaACTTTGTTGATCGAACTGAATTAAAC
GTACATGTTATGGTTATCTTACTAAGAAAGACACTGGCCTAGTGGGTTTT
ATTGTTTATTAAAGTTTCtcatattttcaaactttccgaTATTTTCAGGT
GTTAAACGAAGTCGTGGTCGATCGTGGTACGTCCTCTTCCGTCACGCACG
TCGAGATTTATTGCAACGGACGTTTCTTGACAACACTTTTAGGTGATGGT
CTGATAATTTCCACGCCAACCGGAAGTACCGCTTACTCCATGTCTGCTGG
CGCCTCCTTGGTGCACCCGAGTGTTCCGGGAATTATTGTGACACCCATTT
GCCCGCATTCTCTATCTTTCCGACCGATCGTTCTACCGGCTGGTGTCGAG
CTCaaggtaattttcagttttgttcTTTTGGTGAAAAGAATAAACCAGAA
GCttcatgtttttaaaaacttcacaacAAAAAGTCAACTTCAAAGCGTGG
AGTTTCGTTATTTCGGTTCTCACTAAATTCGAAAGTTTCTAATCTTCGTA
ATGTCTCATTCTTAAAATCAATTCAACCGTAATATTGATATATTGCGAAC
AGCTGACTTCTTTAGGGTCTGTCTTTCTTGATGAAAACGTGTTTTAACCA
ATACctataatttaatttcaatttttattacaGATCATCGTGTCAACGGA
GAGCCGTAACTTCACACCAATGTGCTCATTTGACGGACGCAACCCAAAAG
aaatgaacaaaacaaaatagtaaGTATTTCCCTCTCCTTCAATAAGTtca
aaattcttgatatgcgtaaggcatttttctagcggaaacacccgaaaaaa
tccgggatttgacccctctctgttactaaaaatataaacacggaggtcaa
aatccggcttttttcgagtgcttccgttaaaagatatgacgtcatcttga
cttacgcatatcaagaataccTACCGattattaatttattatttattcat
tcattcgcTCGGACCCTCTTCAAAAGTTTTTAGCCTACTTTCACGTTATC
CAAGGTTGGGGGAATCCAATTTTGCTCTTTATTCTTCTTTGATATGTGTT
TGATTCTGTTGATAAGTTTGTTCTTCAGAAACATAGTTAAACTTTCATTC
ATTGAGCTGATATTTTATTTGCTCGTTTCACGTTACGGTGGAACCCAATT
TTGTGTTTGGTTCTGTTAATAAGAAAGAATAAAAACTGCGAAACAATCGG
CTAATGTTTCTATTTTCTCGTTTAGTTTACGCGTGACAACGTCTATCTAT
CCTATCCCATGTATCAGTCACGAAGATCATTTGGGAGATTGGTTCAACAG
TTTAGGAGAATGTTTACATTGGAATCGCCGTGAAACGAAGCGAACTTCTT
CATTCAAACGCCAACAAAAAGCTGTCAATGGCCAACGGTAATCCGATCGG
GATAAATACTCTACGTTTCGGGATTATATCCCGCTGTTATATTACCCCGA
TTTGGTAATCATGAGATGGAATCGCCTGTTTTCGGGTTGTGAATCCCGTT
TATGAAAATGGTTTGACTCAGTCAGGAAGTCAATCCTACCAACGAACGTT
TAGATAAACGacaaaaatttgtttgaaaatgaaaagctATTTTACAGACG
TTTAAAAACTCgtaaaaaatcaaatgttttaaCAGAGAGacaactgaaaa
aaaacaaatcttcaaatattgaattaaatccacaaaattatattttaaat
ttggaaaaCAAATGTGTACATATTATTTTTATAACATTATAACTTGTTGG
ATATATATtactgataatttttttaacaatcatTCCTTCTTTTTTTATAT
CATTCATGATTCACTTGTATCCAGcttcttctttattttgtttcctaatt
tttctttcaatggTAAAACTATTAAAATGATCAGATCTCTTCAAAATGAT
AAAACTAATTTCTAACCTTAACGTTTTTAATAACCGATAAATCTAATTTT
CTATCACGCAATGTATTACTCGCTCATTCGTCTTCTCTTCAATTTTTTCA
GTCTTTTTATTTCCAACTTCCAACAAAAATTTGGGCCGGTTCCAAAGTAT
ATTTATTGCATTATTTAGATTTTAGGGAATTTAAAACGGGTTaagttttt
ttgtaaatttttttggacttttattCGAGCCTTTTTGTACGTAGATATTT
AGTTTTGAAATACCCTAATTGAAAGTAATAATGAACAATTTAACATAATT
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009673XLOC_009673Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017288-exon-sc0000264-1491911889:337348..337683TCONS_00017288-exon-sc0000264-1491911889:337348..337683Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:337348..337683TCONS_00017288-exon-sc0000264-1510915933:337348..337683Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:337348..337683TCONS_00017288-exon-sc0000264-1575043694:337348..337683Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:339412..339528TCONS_00017288-exon-sc0000264-1491911889:339412..339528Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:339412..339528TCONS_00017288-exon-sc0000264-1510915933:339412..339528Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:339412..339528TCONS_00017288-exon-sc0000264-1575043694:339412..339528Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:344303..344432TCONS_00017288-exon-sc0000264-1491911889:344303..344432Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:344303..344432TCONS_00017288-exon-sc0000264-1510915933:344303..344432Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:344303..344432TCONS_00017288-exon-sc0000264-1575043694:344303..344432Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:346171..346279TCONS_00017288-exon-sc0000264-1491911889:346171..346279Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:346171..346279TCONS_00017288-exon-sc0000264-1510915933:346171..346279Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:346171..346279TCONS_00017288-exon-sc0000264-1575043694:346171..346279Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:346941..347026TCONS_00017288-exon-sc0000264-1491911889:346941..347026Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:346941..347026TCONS_00017288-exon-sc0000264-1510915933:346941..347026Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:346941..347026TCONS_00017288-exon-sc0000264-1575043694:346941..347026Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:347332..347434TCONS_00017288-exon-sc0000264-1491911889:347332..347434Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:347332..347434TCONS_00017288-exon-sc0000264-1510915933:347332..347434Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:347332..347434TCONS_00017288-exon-sc0000264-1575043694:347332..347434Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:347660..347751TCONS_00017288-exon-sc0000264-1491911889:347660..347751Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:347660..347751TCONS_00017288-exon-sc0000264-1510915933:347660..347751Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:347660..347751TCONS_00017288-exon-sc0000264-1575043694:347660..347751Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:347996..348253TCONS_00017288-exon-sc0000264-1491911889:347996..348253Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:347996..348253TCONS_00017288-exon-sc0000264-1510915933:347996..348253Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:347996..348253TCONS_00017288-exon-sc0000264-1575043694:347996..348253Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:348531..348616TCONS_00017288-exon-sc0000264-1491911889:348531..348616Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:348531..348616TCONS_00017288-exon-sc0000264-1510915933:348531..348616Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:348531..348616TCONS_00017288-exon-sc0000264-1575043694:348531..348616Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1491911889:349123..350098TCONS_00017288-exon-sc0000264-1491911889:349123..350098Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1510915933:349123..350098TCONS_00017288-exon-sc0000264-1510915933:349123..350098Clytia hemisphaericaexon
TCONS_00017288-exon-sc0000264-1575043694:349123..350098TCONS_00017288-exon-sc0000264-1575043694:349123..350098Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000264supercontigsc0000264:337348..350098 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.401221	0.355648	0.516804	0.779393	10.2315	7.74418	5.56799	5.47524	4.1339	7.40771	2.93653	3.35445	0.80156	2.56918	0.202439	1.39369	3.65013	5.62698	0	1.6955	1.28781	1.51972	2.87743	2.41804	1.05688	0.397179	3.98974	2.98219	2.61773	3.53856
Blast
[Close]
BLAST of TCONS_00017288 vs. Swiss-Prot (Human)
Match: NADK (NAD kinase OS=Homo sapiens GN=NADK PE=1 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 9.871e-98
Identity = 174/382 (45.55%), Postives = 247/382 (64.66%), Query Frame = 2 
Query:  350 RGRFLFGPSPNHSFGPKASLSSGTPEPYDGEWRDIGMIDPSNQHLEWHSPPQNVLIIKKHMDQDVTKQFKEMVKWLMTEKVMTIIVEENVLCEELVAFDEDFQTYSQKIKPFKAENGNARPSVDLIVCLGGDGTLIHVSSLFQSQCPPVIAFHMGSLGFLTPFSTSSYKEDIQAVMDANLGLSLRSRLKCQVRR------------MSESG---------VDEVESEFLVLNEVVVDRGTSSSVTHVEIYCNGRFLTTLLGDGLIISTPTGSTAYSMSAGASLVHPSVPGIIVTPICPHSLSFRPIVLPAGVELKIIVSTESRNFTPMCSFDGRNPKEMNKTKYLRVTTSIYPIPCISHEDHLGDWFNSLGECLHWNRRETK 1432
            R R L GP P  +FGPKA +    P+        + + DP++Q L W+  P++VL+IKK  D  + + FKE+   LM E  M + VE+ VL +  +A DE F    +K   F+ +  +    +D I+CLGGDGTL++ SSLFQ   PPV+AFH+GSLGFLTPFS  +++  +  V++ N  + LRSRLK +V +            + E+G         V +   ++ VLNEVV+DRG SS +++V++Y +G  +TT+ GDG+I+STPTGSTAY+ +AGAS++HP+VP I++TPICPHSLSFRPIV+PAGVELKI++S E+RN T   SFDGR  +E+     + +TTS YP+P I   D + DWF SL +CLHWN R+ +
Sbjct:   61 RTRSLHGPCPVTTFGPKACVLQ-NPQTI------MHIQDPASQRLTWNKSPKSVLVIKKMRDASLLQPFKELCTHLMEEN-MIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLKVRVVKELRGKKTAVHNGLGENGSQAAGLDMDVGKQAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPICPHSLSFRPIVVPAGVELKIMLSPEARN-TAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVRDPVSDWFESLAQCLHWNVRKKQ 433
The following BLAST results are available for this feature:
BLAST of TCONS_00017288 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NADK9.871e-9845.55NAD kinase OS=Homo sapiens GN=NADK PE=1 SV=1[more]
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