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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00017206 ID=TCONS_00017206|Name=TCONS_00017206|organism=Clytia hemisphaerica|type=transcript|length=1058bp
ACTGCCTGGCGTAATAAAAATCACATTCTTTTTTTACCAAACCGCTTCCA
TCATTCGAGTTGTTGCTTCAGCAAAGACTTATTATCACATGCCAAACTTT
GTCAGctttttgtttacattcttCAATATCAAATTGGATTTCACTTCCAG
TTTCATCAAAATTTGTCCTTTATGTACAAATAGTATGGTTGTTATGGATG
CATTGAAATCTAGTTTATCGTTAGCATGTTTGGCAATTCTTTTACTGGTA
ATGATTATCTGTGTTGCAGTCAATTTCATTATAAAGAAGAGGTTCAAGGA
TGGAAATACCGCTCAAGCTTGTGAGCCATTCTTACGTCGTTTGAAAGGAG
CATATGTCAATGTTTTGCTACTCAGTTATTCCAATATCTCAGTTTTTTGT
TTACGAAATATTCATTGTGTAGAGGTTGCTGGCGAATCATATCTTCGCGT
TCAAGCTTCCATCAAATGTTATACTGATTGGCAATATCTTATCATGGTTG
TGATTGGTTTTTGGGTGGTACCTTTCCCATTAGTCTTGTACACTGGCTGC
CGCGCCCTTAGATCATATCGTATTTCGCCCAACGAGTTTCTTCTCATCCT
TACTTTACCGCCCCTATCACTTTATTTCATGGTCATCCGCCCTCTGGCGT
ACACTGAATACCATTTTGTTTTCGACCAAACCACCCTcgatgaaaaagat
gaaatattGGGTGTGTTAAACGGACCTTTCAAGTTGAGTTTGAAAAACCA
AGAATCTCATCTCATCTGGGAACCTGTTTTGATTTTACGCCGTTTGTTAT
TGATCGTCATGACAACATTTATTTCGTCACCGATCGTCAAATTGTATCCA
GTGGGTttgcttttctttatttttgctgTTCATGATTTTGTGCAAAAGCC
GTTTAGGGAGGAGAGATTGAATTTTATTCAAATCGTGTCAATTTTAGTTT
TGCTattattgacatttttcaacatGTTTTGGGCAGTGACTAACAATGCG
GATTTGCTTCAAGACAAACTCTATTACAAACTCGGTGAAATCTTGTTGAT
TTGTGAAG Run BLAST on NCBI protein sequence of TCONS_00017206-protein >TCONS_00017206-protein ID=TCONS_00017206-protein|Name=TCONS_00017206-protein|organism=Clytia hemisphaerica|type=polypeptide|length=352bp
LPGVIKITFFFYQTASIIRVVASAKTYYHMPNFVSFLFTFFNIKLDFTSS
FIKICPLCTNSMVVMDALKSSLSLACLAILLLVMIICVAVNFIIKKRFKD
GNTAQACEPFLRRLKGAYVNVLLLSYSNISVFCLRNIHCVEVAGESYLRV
QASIKCYTDWQYLIMVVIGFWVVPFPLVLYTGCRALRSYRISPNEFLLIL
TLPPLSLYFMVIRPLAYTEYHFVFDQTTLDEKDEILGVLNGPFKLSLKNQ
ESHLIWEPVLILRRLLLIVMTTFISSPIVKLYPVGLLFFIFAVHDFVQKP
FREERLNFIQIVSILVLLLLTFFNMFWAVTNNADLLQDKLYYKLGEILLI
CE Run BLAST on NCBI transcript from alignment at sc0000260:283672..284729 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00017206 ID=TCONS_00017206|Name=TCONS_00017206|organism=Clytia hemisphaerica|type=transcript|length=1058bp|location=Sequence derived from alignment at sc0000260:283672..284729 (Clytia hemisphaerica)
CTTCACAAATCAACAAGATTTCACCGAGTTTGTAATAGAGTTTGTCTTGA
AGCAAATCCGCATTGTTAGTCACTGCCCAAAACatgttgaaaaatgtcaa
taatAGCAAAACTAAAATTGACACGATTTGAATAAAATTCAATCTCTCCT
CCCTAAACGGCTTTTGCACAAAATCATGAAcagcaaaaataaagaaaagc
aaACCCACTGGATACAATTTGACGATCGGTGACGAAATAAATGTTGTCAT
GACGATCAATAACAAACGGCGTAAAATCAAAACAGGTTCCCAGATGAGAT
GAGATTCTTGGTTTTTCAAACTCAACTTGAAAGGTCCGTTTAACACACCC
aatatttcatctttttcatcgAGGGTGGTTTGGTCGAAAACAAAATGGTA
TTCAGTGTACGCCAGAGGGCGGATGACCATGAAATAAAGTGATAGGGGCG
GTAAAGTAAGGATGAGAAGAAACTCGTTGGGCGAAATACGATATGATCTA
AGGGCGCGGCAGCCAGTGTACAAGACTAATGGGAAAGGTACCACCCAAAA
ACCAATCACAACCATGATAAGATATTGCCAATCAGTATAACATTTGATGG
AAGCTTGAACGCGAAGATATGATTCGCCAGCAACCTCTACACAATGAATA
TTTCGTAAACAAAAAACTGAGATATTGGAATAACTGAGTAGCAAAACATT
GACATATGCTCCTTTCAAACGACGTAAGAATGGCTCACAAGCTTGAGCGG
TATTTCCATCCTTGAACCTCTTCTTTATAATGAAATTGACTGCAACACAG
ATAATCATTACCAGTAAAAGAATTGCCAAACATGCTAACGATAAACTAGA
TTTCAATGCATCCATAACAACCATACTATTTGTACATAAAGGACAAATTT
TGATGAAACTGGAAGTGAAATCCAATTTGATATTGaagaatgtaaacaaa
aagCTGACAAAGTTTGGCATGTGATAATAAGTCTTTGCTGAAGCAACAAC
TCGAATGATGGAAGCGGTTTGGTAAAAAAAGAATGTGATTTTTATTACGC
CAGGCAGT Coding sequence (CDS) from alignment at sc0000260:283672..284729 >TCONS_00017206 ID=TCONS_00017206|Name=TCONS_00017206|organism=Clytia hemisphaerica|type=CDS|length=1056bp|location=Sequence derived from alignment at sc0000260:283672..284729 (Clytia hemisphaerica)
TTCACAAATCAACAAGATTTCACCGAGTTTGTAATAGAGTTTGTCTTGAA
GCAAATCCGCATTGTTAGTCACTGCCCAAAACatgttgaaaaatgtcaat
aatAGCAAAACTAAAATTGACACGATTTGAATAAAATTCAATCTCTCCTC
CCTAAACGGCTTTTGCACAAAATCATGAAcagcaaaaataaagaaaagca
aACCCACTGGATACAATTTGACGATCGGTGACGAAATAAATGTTGTCATG
ACGATCAATAACAAACGGCGTAAAATCAAAACAGGTTCCCAGATGAGATG
AGATTCTTGGTTTTTCAAACTCAACTTGAAAGGTCCGTTTAACACACCCa
atatttcatctttttcatcgAGGGTGGTTTGGTCGAAAACAAAATGGTAT
TCAGTGTACGCCAGAGGGCGGATGACCATGAAATAAAGTGATAGGGGCGG
TAAAGTAAGGATGAGAAGAAACTCGTTGGGCGAAATACGATATGATCTAA
GGGCGCGGCAGCCAGTGTACAAGACTAATGGGAAAGGTACCACCCAAAAA
CCAATCACAACCATGATAAGATATTGCCAATCAGTATAACATTTGATGGA
AGCTTGAACGCGAAGATATGATTCGCCAGCAACCTCTACACAATGAATAT
TTCGTAAACAAAAAACTGAGATATTGGAATAACTGAGTAGCAAAACATTG
ACATATGCTCCTTTCAAACGACGTAAGAATGGCTCACAAGCTTGAGCGGT
ATTTCCATCCTTGAACCTCTTCTTTATAATGAAATTGACTGCAACACAGA
TAATCATTACCAGTAAAAGAATTGCCAAACATGCTAACGATAAACTAGAT
TTCAATGCATCCATAACAACCATACTATTTGTACATAAAGGACAAATTTT
GATGAAACTGGAAGTGAAATCCAATTTGATATTGaagaatgtaaacaaaa
agCTGACAAAGTTTGGCATGTGATAATAAGTCTTTGCTGAAGCAACAACT
CGAATGATGGAAGCGGTTTGGTAAAAAAAGAATGTGATTTTTATTACGCC
AGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00017206-exon-sc0000260-1491911889:283672..284729 | TCONS_00017206-exon-sc0000260-1491911889:283672..284729 | Clytia hemisphaerica | exon |
| TCONS_00017206-exon-sc0000260-1510915933:283672..284729 | TCONS_00017206-exon-sc0000260-1510915933:283672..284729 | Clytia hemisphaerica | exon |
| TCONS_00017206-exon-sc0000260-1575043694:283672..284729 | TCONS_00017206-exon-sc0000260-1575043694:283672..284729 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000260 | supercontig | sc0000260:283672..284729 . |
Blast
The following BLAST results are available for this feature:
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