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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016957 ID=TCONS_00016957|Name=TCONS_00016957|organism=Clytia hemisphaerica|type=transcript|length=402bp
tcgattttccCTCGTACCCAGTAACCTGTTACTATCTTCTATCCTTAAGC
ACAatgACAGGAAGGTTAATTACCATACCAACTCCACATTACAAATGAAT
TTACAGTGTGGTATAAAAGCATGCCCAACATTAACCAGCGCACTGTCACA
TGTCAACATAAAAGACGTCCACAGGTTATTCTGGATTTACTTGGAAGTTG
GTCTTTCAGGAGTGCCAAtcattttgcttttcttttcaaacatcaaagaa
CAAAAAGACAACCATGAAGAAGATGTTTGGGTCGTAGTAAAAGATAATTT
GGTTGCAGTTCTGAAGATCTTCCGAGAGATGTACATATTGGAGTTATTTA
TAATATCCATTGCACTAGGAATGGTTCATAGTTTTATGATAGGCGACATG
AC Run BLAST on NCBI transcript from alignment at sc0000255:208916..210164+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016957 ID=TCONS_00016957|Name=TCONS_00016957|organism=Clytia hemisphaerica|type=transcript|length=1249bp|location=Sequence derived from alignment at sc0000255:208916..210164+ (Clytia hemisphaerica)
tcgattttccCTCGTACCCAGTAACCTGTTACTATCTTCTATCCTTAAGC
ACAGTGAgttcaacattttttgcttgataTATTCACAATGAAACAATCCC
TTGTTCTCTCTAAAAAGTTTGGTCTCGAAATATCCAAAAATCTCATGCCT
TTTGTAATCAATGAGGCCCTcccagtcacctttcaaatAACGCAATCACG
GAAAAagatttccaaatcacgttatcaagataaattttctttctatcacg
atcacgttggTTTCTCCAATCACGTAATCATGCacttttaaatcttaaat
cacAAACTTAAAAAACGCCCAAttacgccatcacgaaaaccgctagGGGC
CTCACAAATTCCACCATTGAAAGTAATAAATTCCaccattgaaaatgaaa
taggGGAAACTGCCTTCCAAAACCATCTCTATTAATTTCTTTAGCCTAAG
ATAATAAGAAGCTTTATCTGCACTTGGTGAATGGTGTTTTAAGAAACTTA
GAGAGAGGTGAACCGGAGAACAGTTTCCTCCACCTACGCTACATACCTAA
CAAAAtccttttttaaataaatgaaCCATAAAAAGCCAAGATTGCAAGTC
AGAATTCTACATTGTAAATTTGTCGTTCCTTAAACCATATGTAATCAATT
CCCATGATTACCAAAGCGGATTGAATACGTAGGGGTGGTACCAggctttc
ggtcggggttgtggacggtgataattgttgttttttatgaaatttgttat
tctttttgtcaaattttagtTAATGCAAGATTCTTtattagataaacccc
ctcttgtgtggattaaaaaaatcaaaaaatcaaacattttctttttaacG
ATATTTCGATCTTTACAGATCTTtatcaagtttaaaaaaataatttttag
atgACAGGAAGGTTAATTACCATACCAACTCCACATTACAAATGAATTTA
CAGTGTGGTATAAAAGCATGCCCAACATTAACCAGCGCACTGTCACATGT
CAACATAAAAGACGTCCACAGGTTATTCTGGATTTACTTGGAAGTTGGTC
TTTCAGGAGTGCCAAtcattttgcttttcttttcaaacatcaaagaaCAA
AAAGACAACCATGAAGAAGATGTTTGGGTCGTAGTAAAAGATAATTTGGT
TGCAGTTCTGAAGATCTTCCGAGAGATGTACATATTGGAGTTATTTATAA
TATCCATTGCACTAGGAATGGTTCATAGTTTTATGATAGGCGACATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016957-exon-sc0000255-1491911889:208916..208968 | TCONS_00016957-exon-sc0000255-1491911889:208916..208968 | Clytia hemisphaerica | exon |
| TCONS_00016957-exon-sc0000255-1510915933:208916..208968 | TCONS_00016957-exon-sc0000255-1510915933:208916..208968 | Clytia hemisphaerica | exon |
| TCONS_00016957-exon-sc0000255-1575043694:208916..208968 | TCONS_00016957-exon-sc0000255-1575043694:208916..208968 | Clytia hemisphaerica | exon |
| TCONS_00016957-exon-sc0000255-1491911889:209816..210164 | TCONS_00016957-exon-sc0000255-1491911889:209816..210164 | Clytia hemisphaerica | exon |
| TCONS_00016957-exon-sc0000255-1510915933:209816..210164 | TCONS_00016957-exon-sc0000255-1510915933:209816..210164 | Clytia hemisphaerica | exon |
| TCONS_00016957-exon-sc0000255-1575043694:209816..210164 | TCONS_00016957-exon-sc0000255-1575043694:209816..210164 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000255 | supercontig | sc0000255:208916..210164 + |
Blast
The following BLAST results are available for this feature:
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