XLOC_009495 (gene) - C. hemisphaerica

Overview
NameXLOC_009495
Unique NameXLOC_009495
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000255:208916..212865+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009495 ID=XLOC_009495|Name=XLOC_009495|organism=Clytia hemisphaerica|type=gene|length=3950bp|location=Sequence derived from alignment at sc0000255:208916..212865+ (Clytia hemisphaerica)
tcgattttccCTCGTACCCAGTAACCTGTTACTATCTTCTATCCTTAAGC
ACAGTGAgttcaacattttttgcttgataTATTCACAATGAAACAATCCC
TTGTTCTCTCTAAAAAGTTTGGTCTCGAAATATCCAAAAATCTCATGCCT
TTTGTAATCAATGAGGCCCTcccagtcacctttcaaatAACGCAATCACG
GAAAAagatttccaaatcacgttatcaagataaattttctttctatcacg
atcacgttggTTTCTCCAATCACGTAATCATGCacttttaaatcttaaat
cacAAACTTAAAAAACGCCCAAttacgccatcacgaaaaccgctagGGGC
CTCACAAATTCCACCATTGAAAGTAATAAATTCCaccattgaaaatgaaa
taggGGAAACTGCCTTCCAAAACCATCTCTATTAATTTCTTTAGCCTAAG
ATAATAAGAAGCTTTATCTGCACTTGGTGAATGGTGTTTTAAGAAACTTA
GAGAGAGGTGAACCGGAGAACAGTTTCCTCCACCTACGCTACATACCTAA
CAAAAtccttttttaaataaatgaaCCATAAAAAGCCAAGATTGCAAGTC
AGAATTCTACATTGTAAATTTGTCGTTCCTTAAACCATATGTAATCAATT
CCCATGATTACCAAAGCGGATTGAATACGTAGGGGTGGTACCAggctttc
ggtcggggttgtggacggtgataattgttgttttttatgaaatttgttat
tctttttgtcaaattttagtTAATGCAAGATTCTTtattagataaacccc
ctcttgtgtggattaaaaaaatcaaaaaatcaaacattttctttttaacG
ATATTTCGATCTTTACAGATCTTtatcaagtttaaaaaaataatttttag
atgACAGGAAGGTTAATTACCATACCAACTCCACATTACAAATGAATTTA
CAGTGTGGTATAAAAGCATGCCCAACATTAACCAGCGCACTGTCACATGT
CAACATAAAAGACGTCCACAGGTTATTCTGGATTTACTTGGAAGTTGGTC
TTTCAGGAGTGCCAAtcattttgcttttcttttcaaacatcaaagaaCAA
AAAGACAACCATGAAGAAGATGTTTGGGTCGTAGTAAAAGATAATTTGGT
TGCAGTTCTGAAGATCTTCCGAGAGATGTACATATTGGAGTTATTTATAA
TATCCATTGCACTAGGAATGGTTCATAGTTTTATGATAGGCGACATGACA
AAGGTACGGTTNttgagggaatcaccttttcagtaatgactctaaaaaga
cgattccttaaatgtcatgatagaaaataaaatagagaAGCTATTAAAAt
tgaatccctcatgagcaaatgccaaattacaaatgccagttggtctaaac
gcagccattgcAAGTCAGAATTCTACATTgtaaatttgtcgttctttaaa
ccaTATGTAATCAATTCCCATGATAATGAAAGTGGATTGAATACGTAGAG
Gtagtacagtcactttcggtcggggttgtggacggtgatatttttcgttt
ttatgaAATGTGTCATTCTTTTTGTCTAATTTTAgttaatgcaggattct
ttattagataaaccccctcttGTGTggatcaaaaaaatcaaaaaatcaaa
aacattttctttttaacGATATTTCGATCTTTACAGATCTTTatcaagtt
tttaaaaataatttttagatgACAGGAAGGTTAATTACCATACCAACTCC
ACATTACAAATGAATTTGCAGTGTGGTATAAAAGCATGCCCAACATTAAC
CAGCACGCTGTCGCATGTCAACATAAAAGACGCCCACAGGTTATTCTGGA
TTTACTTGGAAGTTGGTCTTTCAGGAGTACCAATCATTTTGCTCttcttt
tcaaacatcaaagaaCAAAAAGACAACCAGGAAGAAGATGTTTGGGTCGT
AGTAAAAGATAATTTGGTTGCAGTTCTGAAGATCTTCCGAGAGATGTGGA
TATTGGAGTTATTTATAATATCCATGGCGCAAGGAATGGTTCAAAGTTTT
ATAATAGGCGACATGACAAAGGTACGGTTGTTTTAGACTGGtgcgccagt
cgggctggaactgtatcacgcgggaaaagtgagcgtaggagttaggtaag
cgtaggaaaataaattttgtcgGTGGCAAGGGCTGGTAgctaatcagcag
cctctcaccaacttttgcccgttctcctacgcagctcatattctagcaaa
cgcccgctgCCTTTTTGTTCCCGTCCTCTGAcgtgattaattaacagact
agtttgctagtctacggTTGTTTTCATTTCGTTTTAACTCTAATATCAGA
GCGATTGCCTTTCTCCtttgttgaaatttcaaattccaaAGCAAAATGTA
CCGCTATCTTGTTCATTAGGGCTTTTGTATATAGTAAACCAGtatttaga
ccatgttcgcGCGTAACGGAATgcagccattctattggttagaagtgacg
taacacttgaatgtaaccaatagaatggcttcatttcgtctcggagcgaa
acggaaccatCACGTGCGAACATGATCTTAAACCATCTTTATTACCCCTT
CAGAATTTCGCAACATGTGCTTTTGGAATTCAATACATTGGTTATGTCAT
TATGTGCAGTGGGCTGGGAAACTGTCTGGCTGCTTTGACGGTTCATACAC
TCATTGAAAAGGTTGATTTAAAATACTTGCACTTAttccttttcgaccgt
agtcgcgtggcattttttgtccgctttatctcACTNGTTCGAAATGCttg
caatacaccttttcgaccgtagtcgcgcgggcattttttgtccgctttat
cccactaaaaccgtcccaatccttttttgacgcatttttctattgtctat
aggtgtgaGAAAAGGACTGGTACGATTTTAGTGGGATACAGcagactacg
gtcgaaaagttgTATTATTCCAAACATGAACTGTTTGTGAAATACTTTTA
GAGAGTGACTATTTTAACTTTAATGTTTAGAATTAAAAAGCATACGACAC
CCCTTTTCTCACACTCCCACTGGataatatcgtccccagtgaaTGTTATC
CGCCAATCTTTGTCCTCACTGAAAATGAACCAATTCTCACTGAAAAATGC
TAGATGCTCTTTTCagccccatccccactgaattttcggacttgaaaaca
aaagaattgaaatctaaAGTCATGAAAATACTAGAATATCAattcccatc
gagtttcagttcgttatttttatccccactggctgacaAAATCCCACCGG
AATTGTGAGAAGGGGGCGTCATATGGCGAGTATTTCGAGGGCGGATAGCA
TCAATCGTATCGGATGATGTTGGGAAGCGGAAGATGAACTATAATTAGGT
ATTGCCGGGTATGTGCAGAGCATCCCCCCCTGAACCCTGAATAACAAACC
CGATCCTTAAGCCATACCCATACCTAGCCTGAGCCCCCTctctactctgt
accagagtgtaacTCATGTTTATCGGTTTGTTACACTCtttgcgcattgt
ctgttttgtaaaaaaattcccgtacggagacctctgcgatgaagaaTAAT
TTATAAATAGAAACACTTCTTtcgtcgtctcccctctctcactcgcactc
catcgcagcgttccgtttgaaaaatctcaaatcagaaaaaaacaatgaca
aCAGATCCTCTACGgctatgaattttgaaataagccgtaTATATcaggtc
tgtgtacagactacCCCCTCGGATTTTGTTTGAtgattgttttttcttaa
acCCAGATCGGTATCTTCATCATCATTATGACGTCATGGGCATGCGCGAC
TACCATCATgatcagtttttttttctggaatgtcGCATCATCTCCTCCTG
ATGTTCTCCTCGTTATCAACATTCTGTTCGCGATGGCTGAAGGTGCTCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016957TCONS_00016957Clytia hemisphaericatranscript
TCONS_00016958TCONS_00016958Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016958-proteinTCONS_00016958-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000255supercontigsc0000255:208916..212865 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.29	3.39	1.53	0.89	0	0.39	0.42	0.17	3.04	2.78	1.68	4.26	12.83	14.29	6.97	6.88	0.43	0.33	5.58	1.29	0	0.26	0.97	1.41	0	0.02	0	0	0	0.21