TCONS_00016887 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016887
Unique NameTCONS_00016887
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1783

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016887 ID=TCONS_00016887|Name=TCONS_00016887|organism=Clytia hemisphaerica|type=transcript|length=1783bp
CAGCTCCCAAATTATTCTTGGGAAAGtaacaataaacaaaaaaatgaaaa
agcttttattcaaaaagacgaaagttaatgaaaatgaagaaacgAAAGAC
CAGCAATCACATTCCAGTTTCTTTATTTACAAGAATCTCGCTATTATCAC
TTTTGCTGTTTTCATCAATTTCACTGGATTTTCTGGTCTGCAGAATTTAC
AAAGTAGCTTACATCCTGAAATTGGTTTCATATGTCTTTGTATTCTCTAT
GCAGCTTTTATGGTTAGTTGTCTGTTTCTACCGAATTTGACAGTATGGAA
ACTAGGTTATAAATACACTATGGTGTTAGGGATGAATGGTTATGCTACAT
TCTCGATGGCTCAGTTTTATCCTAAGCTATGGTTAATGGCTATTAGTGCT
TGTATAGCAGGGTGTGCTTCTGCAATATTCTGGTCATCAATATCCTCGAT
GTTAACCTTATTGGCAACGCGCCACGCAAATGACACCAAAACTGACTTCG
ATTCAATCAACCAGAAATTCTTTGCTATCTTTTACTTTGGTTTTCGAATG
GCACATGTGATTGGAAATCTCATCTCATCAGTGGTGTTAACTAAAGATTC
TACTACAGACAGTGTTTCAGTAAATTTCACTCAACCAAATCTACAATGTG
GAATTCAAAACTGTCCTGGACAGCTTACCCAAAACATTAACGTTACATTA
CCTAAAACCGACCTCACCTCATCCAACGTTCAACAGCTTTTCTACATCTA
TCTCGGCACTGGTATTTTCGGCGTCATCGCTGTACTACTCACGCTATCTA
ACCTAAAAGATCAGTCACCTGTTGCtcacaaaacattaaaaagaGAGTTG
GGAGCTGTGCTTGTTTTCCTTAGAAACACAACAATTTGGAAACTAAGTGT
TTTGCCAATTGGTATTGGAATATCTCTTGGATTCGTTTATAGTGATTTGA
CAAAGGCATTTGTGACATGTGCGTTTGGTGTAAATAACGTTGGTTATTCT
ATGATGTGTTTCGGTGCCAGTTCCTGTGTCTCTTCCTTCATTATACAAAG
TATTGTTCGAAAGACTGGATCCTTTGTCATCATCCTGATTGGCTGGTTCG
TTTACATGGCAACCATTGTTTGGTTGTTCTTTTGGGAGATTAGTGAGCAG
CCATTATATGTTGTTTTTATCACAATATCTCTGCTTGGGTTTTCGGACGT
TGCTGTTTTCTCACAAATACACGggttttttggAGTCATGTTCCCAGAGA
ATAAAACAGAAGTTTTCTCAGTGTTCAAGGTCTTCAATTCATTAGGTCAA
GCTTCTTATTTTGCATATGGAAACCACCTTTGTATTCGAACCAAACTTTT
CATTGTGATTGCTTTCTACCTGGTTGGTATCTGTTTATACGCACATGTGT
ATCGTGGATTTACAAAGGATATTAAAAAGCCAAAGGATATTGAAATGGAG
CCCATAAATTCgtaaaatatttagcatatttaTGCAAGAGCAAAAGCCTC
GAtCTATTCAATGCGTTCGGGACAACAATCTACTTTGCGTGTGGAAACCA
CCTTTGCATTCGAACCAAACTTTTCATTGTGATCGCTCTCTACCTGGTTG
GTATTTGCTTATACGCGCACGTGTATCGTAGATATTTAAAGATGTCAAAA
GACGACTCAAGAATAAACGAAGATATCGAACTCAAACACTGATAATAAAG
GAAACTTAATTTTCGGTACCTTTTTCTAATGTGATCTTAAATTTTTACAT
CATATTTTAATTTATAGCTACCTATTTTTTAGC
Run BLAST on NCBI

protein sequence of TCONS_00016887-protein

>TCONS_00016887-protein ID=TCONS_00016887-protein|Name=TCONS_00016887-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
SSQIILGKVTINKKMKKLLFKKTKVNENEETKDQQSHSSFFIYKNLAIIT
FAVFINFTGFSGLQNLQSSLHPEIGFICLCILYAAFMVSCLFLPNLTVWK
LGYKYTMVLGMNGYATFSMAQFYPKLWLMAISACIAGCASAIFWSSISSM
LTLLATRHANDTKTDFDSINQKFFAIFYFGFRMAHVIGNLISSVVLTKDS
TTDSVSVNFTQPNLQCGIQNCPGQLTQNINVTLPKTDLTSSNVQQLFYIY
LGTGIFGVIAVLLTLSNLKDQSPVAHKTLKRELGAVLVFLRNTTIWKLSV
LPIGIGISLGFVYSDLTKAFVTCAFGVNNVGYSMMCFGASSCVSSFIIQS
IVRKTGSFVIILIGWFVYMATIVWLFFWEISEQPLYVVFITISLLGFSDV
AVFSQIHGFFGVMFPENKTEVFSVFKVFNSLGQASYFAYGNHLCIRTKLF
IVIAFYLVGICLYAHVYRGFTKDIKKPKDIEMEPINS
Run BLAST on NCBI

transcript from alignment at sc0000253:214977..220126-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016887 ID=TCONS_00016887|Name=TCONS_00016887|organism=Clytia hemisphaerica|type=transcript|length=5150bp|location=Sequence derived from alignment at sc0000253:214977..220126- (Clytia hemisphaerica)
CAGCTCCCAAATTATTCTTGGGAAAGTAACAATAAACAAAAAAATGAAAA
AGCTTTTATTCAAAAAGACGAAAGTTAATGAAAATGAAGAAACGAAAGAC
CAGCAATCACATTCCAGTTTCTTTATTTACAAGAATCTCGCTATTATCAC
TTTTGCTGTTTTCATCAATTTCACTGGATTTTCTGGTCTGCAGAATTTAC
AAAGTAGCTTACATCCTGAAATTGGTTTCATATGTCTTTGTATTCTCTAT
GCAGCTTTTATGGTTAGTTGTCTGTTTCTACCGAATTTGACAGTATGGAA
ACTAGGTTATAAATACACTATGGTGTTAGGGATGAATGGTTATGCTACAT
TCTCGATGGCTCAGTTTTATCCTAAGCTATGGTTAATGGCTATTAGTGCT
TGTATAGCAGGTAAGATATATTCACATTTGACATCCCTATTTCAATGACA
CAGGGAAGTATATTCTATAGATCAGTGAAGATAGCATGAACAGCTGTAAT
CTCCAAACCTCTTTTACTACTGCAAGATTGCCAAAACTTCAGTGTTTTAA
CATTGGGTTAAAGAGTCCAAATTGCAATTTTTGGATTATTTGAACCCTGT
GATAATCCCTGGTAAAATATTGCTTTCCAATAACCATAGATTATAACTGA
ACTCATAGGGTGTGCTTCTGCAATATTCTGGTCATCAATATCCTCGATGT
TAACCTTATTGGCAACGCGCCACGCAAATGACACCAAAACTGACTTCGAT
TCAATCAACCAGAAATTCTTTGCTATCTTTTACTTTGGTTTTCGAATGGC
ACATGTGATTGGAAATCTCATCTCATCAGTGGTGTTAACTAAAGGTAAGT
ACGGGTAAGTACATTTGATTCTCTCCTATTCGATCTTCAAGAAATCAAAA
ATTACCCCAGATGAGAAGACAAGTACTGCAGTTCGAATCAGAGAAAAATT
TACAATTATAAATAAGGATCGAGTTAGAGACAGTTAACTGTATTTATATA
TAGGAATATGATTGCAAAGTTTTACACACACCCCTGTCTCTTTATCCCAC
TTGATGACGAAAATCCAGTTGAAAAATTGTAAAATCTGAATGTTGTCAAG
TGTTCCAAAAGTATGCACAAGAAGCTTTGTTATTTGTTTCTTCGCATACA
TTCTTCAAAATTTGTACTATTTTTCTAGTTACCAAGAGTGTGGGATCACT
TGGCTGAATATCACTTTTTTGAATAATAACACAAACACCATTTCACCCAT
AGATTCTACTACAGACAGTGTTTCAGTAAATTTCACTCAACCAAATCTAC
AATGTGGAATTCAAAACTGTCCTGGACAGCTTACCCAAAACATTAACGTT
ACATTACCTAAAACCGACCTCACCTCATCCAACGTTCAACAGCTTTTCTA
CATCTATCTCGGCACTGGTATTTTCGGCGTCATCGCTGTACTACTCACGC
TATCTAACCTAAAAGATCAGTCACCTGTTGCTCACAAAACATTAAAAAGA
GAGTTGGGAGCTGTGCTTGTTTTCCTTAGAAACACAACAATTTGGAAACT
AAGTGTTTTGCCAATTGGTATTGGAATATCTCTTGGATTCGTTTATAGTG
ATTTGACAAAGGTTGATTTATTTCCTATTAATTTTCAGATATAAACATTT
GAGAGATTTACATTTTTAGCTTTGATTTATCTTTGAGGCCCCTCAGTGGA
CCTTCAACTCATGCAGATCTTTTAAAGTGTTCACGTATTCACGCAAGATA
TTAGCTCGAGAACATAAAGATTTTTTCAGTTAGTTAGTTTTTACCCCCAC
TGGCTGAAAAGATTCTACCGGTTCTGTGAGAAGGGGATGTTATACAAACG
AACTCGTTGTCTAAAAGTACATAAGATATGGCCTAACAAAATTCATCTTT
CAGGCATTTGTGACATGTGCGTTTGGTGTAAATAACGTTGGTTATTCTAT
GATGTGTTTCGGTGCCAGTTCCTGTGTCTCTTCCTTCATTATACAAAGTA
TTGTTCGAAAGACTGGATCCTTTGTCATCATCCTGATTGGCTGGTTCGTT
TACATGGCAACCATTGTTTGGTTGTTCTTTTGGGAGATTAGTGAGCAGCC
ATTATATGTTGTTTTTATCACAATATCTCTGCTTGGGTTTTCGGACGTTG
CTGTTTTCTCACAAATACACGGTAAGAAGATTTTCACTTTTGTTTTCATA
CGTTGGCTTCTCTTGACGAGAACTTTAGGTCAAGACGCCTTATTTTTTAG
CTTATATAATGCCTATAATTCTAGCTAGTAGATTTGTGTGGTAAGCTTTA
AGAAGTAGGCTTTAAAGAGATTTGAAATCAAGAAATTAGTAACTGGTAAA
GGACTAGAAACTAGATTGCTATTACATGGGCCCCGTCAACGTCAACTCAA
AATGACTCACCGGGGCCCATGTATTAAAGGGAGCATAATCCGAGGGAATA
AAGGGCATTGGCACGATCCCGGGGGGGGGGGGACTTAGGCAAAAAAGGGG
GCTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAAATT
CAGTCTCTCTAAGGGTAAGGGTCCAGAGGTCTGGCACGCACATACCCGAC
ACCCATCAATCCTAGTACCCCCCCCCGGGGGCACGATAGATCTAGTAAAT
AAGTAACTTGAAACTACTAAGGCATAGATTAGAACGAAGAGAATTGAAAT
TCAAAATTTTCCTTTTTTTCAGGGTTTTTTGGAGTCATGTTCCCAGAGAA
TAAAACAGAAGTTTTCTCAGTGTTCAAGGTCTTCAATTCATTAGGTCAAG
CTTCTTATTTTGCATATGGAAACCACCTTTGTATTCGAACCAAACTTTTC
ATTGTGATTGCTTTCTACCTGGTTGGTATCTGTTTATACGCACATGTGTA
TCGTGGATTTACAAAGGATATTAAAAAGCCAAAGGATATTGAAATGGAGC
CCATAAATTCGTAAAATATTTAGCATATTTATGCAAGAGCAAAAGCCTCG
ATGTATGTTTTTATGTTTTGCTTTATAATCATTTATGAAAATCTTGTCTC
TTTGAGACGCTTATCTCAGTGACTTTTTCTTTTCCTGGAAAAAAAATCCT
GCTTCATTTTTGGGATCTTTCCGCTGTTTTTCAGGACATGATATTATATA
TTTTTTGCTCCCTAATGCATAGAAACGTAACGGCTTGACCCGCTTAACAC
ACCCCTTTCTCACAGACCCAGTGAGATTTTATCAGCCAGTGGGGGCAAAA
ATAATAGACCAAAACTCGACGATGGGCATTGATATTCTCATGTTTTTTAT
GGCTGGGTATTAGAATTCCAATGTTTTCTAGCCAGAAAATTCAGTGGGGA
TGGTAAAAAATAGCACAATATTTTGCAGTGAGGATTTGCTGATTATTTTC
AGCGGGGGACAAACATTAGAGTAAAATTTTCAACTTTTGGGACGATATTT
TGGCTAACATTTTTCCAGTGGGAAGGGTTCCAGTGCAGTGGGTCTGTCAG
AAGGAAGTATCTTAACAGAAGTTGAAGCTACTTTTGTACCTACCCAGAGT
TATGGTTTTATTCCATTGTAAAGTGGCATGAAGAATGTCTTGCCAGAAAT
GAGAAAGTTTACCGATTTTGTGGTACCGTGCTTATCTAAAACAATAAAAA
AGTTCCCTAAACAATCAAAGACGCCAGATGACAAAAATTTGGATAATGCT
GTGTTCCTGTTACAACCACTTTGAAAAACCAAGCAGGCGATTTATCCATG
AAAGACTTCTTGCAGAGTATATTTTTTAACCGGTCAGCCTGGTTCGTCTC
TCGAATTATTCTGAAATGTTCAGTGGAAATGTTTTCATTTGATAGTTCAG
GGAACTTTTGGATTTGTTTAAAGTACAGTTGAACTTATGTAATTCAAACT
CCCATAATTCAAAAACTTACTCGAACAGATTCTTGAGAATTTGAATTACA
TGAGTTCAACAGTAAGTACGGTATAATCTGTAAATGAAATGATAAAATGA
ACCCCACTGATATAAAACGTAAACATTGTTTAGTCGGTCCCCTTTCATTT
GGATAATTTTTTTACGTGCAATTTATTTCCATTGCATAATGAAAAGGAAT
GTACATAAAAGAATGAAGTTTCCCAGCTGGCACAAAACGTCGTTTCAACG
TTTTTCTAATATTCACAACGTCCATTTAACGTTAGATTGACGTTGAAACA
ACGTTGTGTGTCAGCTGGGTTTGCAACGTTGTGCCCTAGTTAGGTATATT
CATTGTTTTCATAGGATTTTTCGGGATTTTGTTCCAAGACCAAAAGACTG
AAGTATTTACTGTCTTTAAGCTATTCAATGCGTTCGGGACAACAATCTAC
TTTGCGTGTGGAAACCACCTTTGCATTCGAACCAAACTTTTCATTGTGAT
CGCTCTCTACCTGGTTGGTATTTGCTTATACGCGCACGTGTATCGTAGAT
ATTTAAAGATGTCAAAAGACGACTCAAGAATAAACGAAGATATCGAACTC
AAACACTGATAATAAAGGAAACTTAATTTTCGGTACCTTTTTCTAATGTG
ATCTTAAATTTTTACATCATATTTTAATTTATAGCTACCTATTTTTTAGC

Coding sequence (CDS) from alignment at sc0000253:214977..220126-

>TCONS_00016887 ID=TCONS_00016887|Name=TCONS_00016887|organism=Clytia hemisphaerica|type=CDS|length=7320bp|location=Sequence derived from alignment at sc0000253:214977..220126- (Clytia hemisphaerica)
GGTTTTTTGGAGTCATGTTCCCAGAGAATAAAACAGAAGTTTTCTCAGTG
TTCAAGGTCTTCAATTCATTAGGTCAAGCTTCTTATTTTGCATATGGAAA
CCACCTTTGTATTCGAACCAAACTTTTCATTGTGATTGCTTTCTACCTGG
TTGGTATCTGTTTATACGCACATGTGTATCGTGGATTTACAAAGGATATT
AAAAAGCCAAAGGATATTGAAATGGAGCCCATAAATTCGTAAGCATTTGT
GACATGTGCGTTTGGTGTAAATAACGTTGGTTATTCTATGATGTGTTTCG
GTGCCAGTTCCTGTGTCTCTTCCTTCATTATACAAAGTATTGTTCGAAAG
ACTGGATCCTTTGTCATCATCCTGATTGGCTGGTTCGTTTACATGGCAAC
CATTGTTTGGTTGTTCTTTTGGGAGATTAGTGAGCAGCCATTATATGTTG
TTTTTATCACAATATCTCTGCTTGGGTTTTCGGACGTTGCTGTTTTCTCA
CAAATACACGATTCTACTACAGACAGTGTTTCAGTAAATTTCACTCAACC
AAATCTACAATGTGGAATTCAAAACTGTCCTGGACAGCTTACCCAAAACA
TTAACGTTACATTACCTAAAACCGACCTCACCTCATCCAACGTTCAACAG
CTTTTCTACATCTATCTCGGCACTGGTATTTTCGGCGTCATCGCTGTACT
ACTCACGCTATCTAACCTAAAAGATCAGTCACCTGTTGCTCACAAAACAT
TAAAAAGAGAGTTGGGAGCTGTGCTTGTTTTCCTTAGAAACACAACAATT
TGGAAACTAAGTGTTTTGCCAATTGGTATTGGAATATCTCTTGGATTCGT
TTATAGTGATTTGACAAAGGGTGTGCTTCTGCAATATTCTGGTCATCAAT
ATCCTCGATGTTAACCTTATTGGCAACGCGCCACGCAAATGACACCAAAA
CTGACTTCGATTCAATCAACCAGAAATTCTTTGCTATCTTTTACTTTGGT
TTTCGAATGGCACATGTGATTGGAAATCTCATCTCATCAGTGGTGTTAAC
TAAAGAGCTCCCAAATTATTCTTGGGAAAGTAACAATAAACAAAAAAATG
AAAAAGCTTTTATTCAAAAAGACGAAAGTTAATGAAAATGAAGAAACGAA
AGACCAGCAATCACATTCCAGTTTCTTTATTTACAAGAATCTCGCTATTA
TCACTTTTGCTGTTTTCATCAATTTCACTGGATTTTCTGGTCTGCAGAAT
TTACAAAGTAGCTTACATCCTGAAATTGGTTTCATATGTCTTTGTATTCT
CTATGCAGCTTTTATGGTTAGTTGTCTGTTTCTACCGAATTTGACAGTAT
GGAAACTAGGTTATAAATACACTATGGTGTTAGGGATGAATGGTTATGCT
ACATTCTCGATGGCTCAGTTTTATCCTAAGCTATGGTTAATGGCTATTAG
TGCTTGTATAGCAGGGTTTTTTGGAGTCATGTTCCCAGAGAATAAAACAG
AAGTTTTCTCAGTGTTCAAGGTCTTCAATTCATTAGGTCAAGCTTCTTAT
TTTGCATATGGAAACCACCTTTGTATTCGAACCAAACTTTTCATTGTGAT
TGCTTTCTACCTGGTTGGTATCTGTTTATACGCACATGTGTATCGTGGAT
TTACAAAGGATATTAAAAAGCCAAAGGATATTGAAATGGAGCCCATAAAT
TCGTAAGCATTTGTGACATGTGCGTTTGGTGTAAATAACGTTGGTTATTC
TATGATGTGTTTCGGTGCCAGTTCCTGTGTCTCTTCCTTCATTATACAAA
GTATTGTTCGAAAGACTGGATCCTTTGTCATCATCCTGATTGGCTGGTTC
GTTTACATGGCAACCATTGTTTGGTTGTTCTTTTGGGAGATTAGTGAGCA
GCCATTATATGTTGTTTTTATCACAATATCTCTGCTTGGGTTTTCGGACG
TTGCTGTTTTCTCACAAATACACGATTCTACTACAGACAGTGTTTCAGTA
AATTTCACTCAACCAAATCTACAATGTGGAATTCAAAACTGTCCTGGACA
GCTTACCCAAAACATTAACGTTACATTACCTAAAACCGACCTCACCTCAT
CCAACGTTCAACAGCTTTTCTACATCTATCTCGGCACTGGTATTTTCGGC
GTCATCGCTGTACTACTCACGCTATCTAACCTAAAAGATCAGTCACCTGT
TGCTCACAAAACATTAAAAAGAGAGTTGGGAGCTGTGCTTGTTTTCCTTA
GAAACACAACAATTTGGAAACTAAGTGTTTTGCCAATTGGTATTGGAATA
TCTCTTGGATTCGTTTATAGTGATTTGACAAAGGGTGTGCTTCTGCAATA
TTCTGGTCATCAATATCCTCGATGTTAACCTTATTGGCAACGCGCCACGC
AAATGACACCAAAACTGACTTCGATTCAATCAACCAGAAATTCTTTGCTA
TCTTTTACTTTGGTTTTCGAATGGCACATGTGATTGGAAATCTCATCTCA
TCAGTGGTGTTAACTAAAGAGCTCCCAAATTATTCTTGGGAAAGTAACAA
TAAACAAAAAAATGAAAAAGCTTTTATTCAAAAAGACGAAAGTTAATGAA
AATGAAGAAACGAAAGACCAGCAATCACATTCCAGTTTCTTTATTTACAA
GAATCTCGCTATTATCACTTTTGCTGTTTTCATCAATTTCACTGGATTTT
CTGGTCTGCAGAATTTACAAAGTAGCTTACATCCTGAAATTGGTTTCATA
TGTCTTTGTATTCTCTATGCAGCTTTTATGGTTAGTTGTCTGTTTCTACC
GAATTTGACAGTATGGAAACTAGGTTATAAATACACTATGGTGTTAGGGA
TGAATGGTTATGCTACATTCTCGATGGCTCAGTTTTATCCTAAGCTATGG
TTAATGGCTATTAGTGCTTGTATAGCAGGGTTTTTTGGAGTCATGTTCCC
AGAGAATAAAACAGAAGTTTTCTCAGTGTTCAAGGTCTTCAATTCATTAG
GTCAAGCTTCTTATTTTGCATATGGAAACCACCTTTGTATTCGAACCAAA
CTTTTCATTGTGATTGCTTTCTACCTGGTTGGTATCTGTTTATACGCACA
TGTGTATCGTGGATTTACAAAGGATATTAAAAAGCCAAAGGATATTGAAA
TGGAGCCCATAAATTCGTAAGCATTTGTGACATGTGCGTTTGGTGTAAAT
AACGTTGGTTATTCTATGATGTGTTTCGGTGCCAGTTCCTGTGTCTCTTC
CTTCATTATACAAAGTATTGTTCGAAAGACTGGATCCTTTGTCATCATCC
TGATTGGCTGGTTCGTTTACATGGCAACCATTGTTTGGTTGTTCTTTTGG
GAGATTAGTGAGCAGCCATTATATGTTGTTTTTATCACAATATCTCTGCT
TGGGTTTTCGGACGTTGCTGTTTTCTCACAAATACACGATTCTACTACAG
ACAGTGTTTCAGTAAATTTCACTCAACCAAATCTACAATGTGGAATTCAA
AACTGTCCTGGACAGCTTACCCAAAACATTAACGTTACATTACCTAAAAC
CGACCTCACCTCATCCAACGTTCAACAGCTTTTCTACATCTATCTCGGCA
CTGGTATTTTCGGCGTCATCGCTGTACTACTCACGCTATCTAACCTAAAA
GATCAGTCACCTGTTGCTCACAAAACATTAAAAAGAGAGTTGGGAGCTGT
GCTTGTTTTCCTTAGAAACACAACAATTTGGAAACTAAGTGTTTTGCCAA
TTGGTATTGGAATATCTCTTGGATTCGTTTATAGTGATTTGACAAAGGGT
GTGCTTCTGCAATATTCTGGTCATCAATATCCTCGATGTTAACCTTATTG
GCAACGCGCCACGCAAATGACACCAAAACTGACTTCGATTCAATCAACCA
GAAATTCTTTGCTATCTTTTACTTTGGTTTTCGAATGGCACATGTGATTG
GAAATCTCATCTCATCAGTGGTGTTAACTAAAGAGCTCCCAAATTATTCT
TGGGAAAGTAACAATAAACAAAAAAATGAAAAAGCTTTTATTCAAAAAGA
CGAAAGTTAATGAAAATGAAGAAACGAAAGACCAGCAATCACATTCCAGT
TTCTTTATTTACAAGAATCTCGCTATTATCACTTTTGCTGTTTTCATCAA
TTTCACTGGATTTTCTGGTCTGCAGAATTTACAAAGTAGCTTACATCCTG
AAATTGGTTTCATATGTCTTTGTATTCTCTATGCAGCTTTTATGGTTAGT
TGTCTGTTTCTACCGAATTTGACAGTATGGAAACTAGGTTATAAATACAC
TATGGTGTTAGGGATGAATGGTTATGCTACATTCTCGATGGCTCAGTTTT
ATCCTAAGCTATGGTTAATGGCTATTAGTGCTTGTATAGCAGGGTTTTTT
GGAGTCATGTTCCCAGAGAATAAAACAGAAGTTTTCTCAGTGTTCAAGGT
CTTCAATTCATTAGGTCAAGCTTCTTATTTTGCATATGGAAACCACCTTT
GTATTCGAACCAAACTTTTCATTGTGATTGCTTTCTACCTGGTTGGTATC
TGTTTATACGCACATGTGTATCGTGGATTTACAAAGGATATTAAAAAGCC
AAAGGATATTGAAATGGAGCCCATAAATTCGTAAGCATTTGTGACATGTG
CGTTTGGTGTAAATAACGTTGGTTATTCTATGATGTGTTTCGGTGCCAGT
TCCTGTGTCTCTTCCTTCATTATACAAAGTATTGTTCGAAAGACTGGATC
CTTTGTCATCATCCTGATTGGCTGGTTCGTTTACATGGCAACCATTGTTT
GGTTGTTCTTTTGGGAGATTAGTGAGCAGCCATTATATGTTGTTTTTATC
ACAATATCTCTGCTTGGGTTTTCGGACGTTGCTGTTTTCTCACAAATACA
CGATTCTACTACAGACAGTGTTTCAGTAAATTTCACTCAACCAAATCTAC
AATGTGGAATTCAAAACTGTCCTGGACAGCTTACCCAAAACATTAACGTT
ACATTACCTAAAACCGACCTCACCTCATCCAACGTTCAACAGCTTTTCTA
CATCTATCTCGGCACTGGTATTTTCGGCGTCATCGCTGTACTACTCACGC
TATCTAACCTAAAAGATCAGTCACCTGTTGCTCACAAAACATTAAAAAGA
GAGTTGGGAGCTGTGCTTGTTTTCCTTAGAAACACAACAATTTGGAAACT
AAGTGTTTTGCCAATTGGTATTGGAATATCTCTTGGATTCGTTTATAGTG
ATTTGACAAAGGGTGTGCTTCTGCAATATTCTGGTCATCAATATCCTCGA
TGTTAACCTTATTGGCAACGCGCCACGCAAATGACACCAAAACTGACTTC
GATTCAATCAACCAGAAATTCTTTGCTATCTTTTACTTTGGTTTTCGAAT
GGCACATGTGATTGGAAATCTCATCTCATCAGTGGTGTTAACTAAAGAGC
TCCCAAATTATTCTTGGGAAAGTAACAATAAACAAAAAAATGAAAAAGCT
TTTATTCAAAAAGACGAAAGTTAATGAAAATGAAGAAACGAAAGACCAGC
AATCACATTCCAGTTTCTTTATTTACAAGAATCTCGCTATTATCACTTTT
GCTGTTTTCATCAATTTCACTGGATTTTCTGGTCTGCAGAATTTACAAAG
TAGCTTACATCCTGAAATTGGTTTCATATGTCTTTGTATTCTCTATGCAG
CTTTTATGGTTAGTTGTCTGTTTCTACCGAATTTGACAGTATGGAAACTA
GGTTATAAATACACTATGGTGTTAGGGATGAATGGTTATGCTACATTCTC
GATGGCTCAGTTTTATCCTAAGCTATGGTTAATGGCTATTAGTGCTTGTA
TAGCAGGGTTTTTTGGAGTCATGTTCCCAGAGAATAAAACAGAAGTTTTC
TCAGTGTTCAAGGTCTTCAATTCATTAGGTCAAGCTTCTTATTTTGCATA
TGGAAACCACCTTTGTATTCGAACCAAACTTTTCATTGTGATTGCTTTCT
ACCTGGTTGGTATCTGTTTATACGCACATGTGTATCGTGGATTTACAAAG
GATATTAAAAAGCCAAAGGATATTGAAATGGAGCCCATAAATTCGTAAGC
ATTTGTGACATGTGCGTTTGGTGTAAATAACGTTGGTTATTCTATGATGT
GTTTCGGTGCCAGTTCCTGTGTCTCTTCCTTCATTATACAAAGTATTGTT
CGAAAGACTGGATCCTTTGTCATCATCCTGATTGGCTGGTTCGTTTACAT
GGCAACCATTGTTTGGTTGTTCTTTTGGGAGATTAGTGAGCAGCCATTAT
ATGTTGTTTTTATCACAATATCTCTGCTTGGGTTTTCGGACGTTGCTGTT
TTCTCACAAATACACGATTCTACTACAGACAGTGTTTCAGTAAATTTCAC
TCAACCAAATCTACAATGTGGAATTCAAAACTGTCCTGGACAGCTTACCC
AAAACATTAACGTTACATTACCTAAAACCGACCTCACCTCATCCAACGTT
CAACAGCTTTTCTACATCTATCTCGGCACTGGTATTTTCGGCGTCATCGC
TGTACTACTCACGCTATCTAACCTAAAAGATCAGTCACCTGTTGCTCACA
AAACATTAAAAAGAGAGTTGGGAGCTGTGCTTGTTTTCCTTAGAAACACA
ACAATTTGGAAACTAAGTGTTTTGCCAATTGGTATTGGAATATCTCTTGG
ATTCGTTTATAGTGATTTGACAAAGGGTGTGCTTCTGCAATATTCTGGTC
ATCAATATCCTCGATGTTAACCTTATTGGCAACGCGCCACGCAAATGACA
CCAAAACTGACTTCGATTCAATCAACCAGAAATTCTTTGCTATCTTTTAC
TTTGGTTTTCGAATGGCACATGTGATTGGAAATCTCATCTCATCAGTGGT
GTTAACTAAAGAGCTCCCAAATTATTCTTGGGAAAGTAACAATAAACAAA
AAAATGAAAAAGCTTTTATTCAAAAAGACGAAAGTTAATGAAAATGAAGA
AACGAAAGACCAGCAATCACATTCCAGTTTCTTTATTTACAAGAATCTCG
CTATTATCACTTTTGCTGTTTTCATCAATTTCACTGGATTTTCTGGTCTG
CAGAATTTACAAAGTAGCTTACATCCTGAAATTGGTTTCATATGTCTTTG
TATTCTCTATGCAGCTTTTATGGTTAGTTGTCTGTTTCTACCGAATTTGA
CAGTATGGAAACTAGGTTATAAATACACTATGGTGTTAGGGATGAATGGT
TATGCTACATTCTCGATGGCTCAGTTTTATCCTAAGCTATGGTTAATGGC
TATTAGTGCTTGTATAGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009450XLOC_009450Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016887-exon-sc0000253-1575043694:219717..220126TCONS_00016887-exon-sc0000253-1575043694:219717..220126Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1575043694:219283..219468TCONS_00016887-exon-sc0000253-1575043694:219283..219468Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1575043694:218516..218874TCONS_00016887-exon-sc0000253-1575043694:218516..218874Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1575043694:217956..218223TCONS_00016887-exon-sc0000253-1575043694:217956..218223Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1575043694:216575..216854TCONS_00016887-exon-sc0000253-1575043694:216575..216854Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1575043694:214977..215256TCONS_00016887-exon-sc0000253-1575043694:214977..215256Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1510915933:219717..220126TCONS_00016887-exon-sc0000253-1510915933:219717..220126Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1510915933:219283..219468TCONS_00016887-exon-sc0000253-1510915933:219283..219468Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1510915933:218516..218874TCONS_00016887-exon-sc0000253-1510915933:218516..218874Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1510915933:217956..218223TCONS_00016887-exon-sc0000253-1510915933:217956..218223Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1510915933:216575..216854TCONS_00016887-exon-sc0000253-1510915933:216575..216854Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1510915933:214977..215256TCONS_00016887-exon-sc0000253-1510915933:214977..215256Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1491911889:219717..220126TCONS_00016887-exon-sc0000253-1491911889:219717..220126Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1491911889:219283..219468TCONS_00016887-exon-sc0000253-1491911889:219283..219468Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1491911889:218516..218874TCONS_00016887-exon-sc0000253-1491911889:218516..218874Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1491911889:217956..218223TCONS_00016887-exon-sc0000253-1491911889:217956..218223Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1491911889:216575..216854TCONS_00016887-exon-sc0000253-1491911889:216575..216854Clytia hemisphaericaexon
TCONS_00016887-exon-sc0000253-1491911889:214977..215256TCONS_00016887-exon-sc0000253-1491911889:214977..215256Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016887-proteinTCONS_00016887-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000253supercontigsc0000253:214977..220126 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.1559	31.7586	39.992	35.6723	1.18545	0	2.1351	1.28477	0.167807	3.30723	0.290424	0.727517	6.56479	9.49861	5.16252	5.68194	2.82393	4.43982	1.51289	4.50773	12.9838	12.9471	11.7995	15.0373	0.0371149	1.56508	1.57624	0.619639	9.43249	11.8414
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010291Ion_channel_UNC-93
IPR020846MFS_dom
Blast
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BLAST of TCONS_00016887 vs. Swiss-Prot (Human)
Match: UN93A (Protein unc-93 homolog A OS=Homo sapiens GN=UNC93A PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.946e-50
Identity = 129/445 (28.99%), Postives = 228/445 (51.24%), Query Frame = 2 
Query:  131 KNLAIITFAVFINFTGFSGLQNLQSSLHPE--IGFICLCILYAAFMVSCLFLPNLTVWKLGYKYTMVLGMNGYATFSMAQFYPKLWLMXXXXXXXXXXXXXFWSSISSMLTLLATRHANDT-KTDFDSINQKFFAIFYFGFRMAHVIGNLISSVVLTKDSTTDSVSVNFTQPNLQ---CGIQNCPGQLTQNINVTLPKTDLTSSNVQQLFYIYLGTGIFGVIAVLLTLSNLKD---QSPVAHKTLK--RELGAVLVFLRNTTIWKLSVLPIGIGISLGFVYSDLTKAFVTCAFGVNNVGYSMMCFGASSCVSSFIIQSIVRKTGSFVIILIGWFVYMATIVWLFFWEISEQPLYVVFITISLLGFSDVAVFSQIHGFFGVMFPENKTEVFSVFKVFNSLGQASYFAYGNHLCIRTKLFIVIAFYLVGICLYAHVYRGFTKDIKKP 1432
            +N+ +++F   + FT + GLQ+LQSSL+ E  +G   L  LY   ++S +FLP L + +LG K T++L M GY  FS+  F+   + +  ++ + G  +A  WS+  + LT+    HA    K   D +NQ +F IF+  F+ + V GNLISS+V  +  + +++      P  Q   CG  +C    T   +   P   L    V  L  IY G+G+  V+ +   L  ++D   +S    K++     L +     R+  +  L +LP+  G+  GF+ S+ T+++VTC  G+  VGY M+CF A+  + S +   + + TG  V+ ++G   +++ ++ L  W      L V F+   L G +D    +Q +  +GV+F ++K   F+ ++++ +LG    F Y   LC+  KL+I++    + +  Y  V    +K+  +P
Sbjct:    6 RNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPLLIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGNTHAEKAGKRGKDMVNQ-YFGIFFLIFQSSGVWGNLISSLVFGQTPSQETL------PEEQLTSCGASDCLMATTTTNSTQRPSQQL----VYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSLTMVAYGLVECVESKNPIRP 439
The following BLAST results are available for this feature:
BLAST of TCONS_00016887 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UN93A1.946e-5028.99Protein unc-93 homolog A OS=Homo sapiens GN=UNC93A... [more]
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