TCONS_00016887-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016887-protein
Unique NameTCONS_00016887-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length487

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016887-protein ID=TCONS_00016887-protein|Name=TCONS_00016887-protein|organism=Clytia hemisphaerica|type=polypeptide|length=487bp
SSQIILGKVTINKKMKKLLFKKTKVNENEETKDQQSHSSFFIYKNLAIIT
FAVFINFTGFSGLQNLQSSLHPEIGFICLCILYAAFMVSCLFLPNLTVWK
LGYKYTMVLGMNGYATFSMAQFYPKLWLMAISACIAGCASAIFWSSISSM
LTLLATRHANDTKTDFDSINQKFFAIFYFGFRMAHVIGNLISSVVLTKDS
TTDSVSVNFTQPNLQCGIQNCPGQLTQNINVTLPKTDLTSSNVQQLFYIY
LGTGIFGVIAVLLTLSNLKDQSPVAHKTLKRELGAVLVFLRNTTIWKLSV
LPIGIGISLGFVYSDLTKAFVTCAFGVNNVGYSMMCFGASSCVSSFIIQS
IVRKTGSFVIILIGWFVYMATIVWLFFWEISEQPLYVVFITISLLGFSDV
AVFSQIHGFFGVMFPENKTEVFSVFKVFNSLGQASYFAYGNHLCIRTKLF
IVIAFYLVGICLYAHVYRGFTKDIKKPKDIEMEPINS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009450XLOC_009450Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016887TCONS_00016887Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010291Ion_channel_UNC-93
IPR020846MFS_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010291Ion channel regulatory protein, UNC-93PFAMPF05978UNC-93coord: 69..165
e-value: 5.1E-12
score: 45.7
NoneNo IPR availableGENE3D1.20.1250.20coord: 282..477
e-value: 5.0E-8
score: 31.9
NoneNo IPR availableGENE3D1.20.1250.20coord: 35..281
e-value: 5.4E-12
score: 44.9
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 239..470
coord: 29..196

Blast
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BLAST of TCONS_00016887-protein vs. Swiss-Prot (Human)
Match: UN93A (Protein unc-93 homolog A OS=Homo sapiens GN=UNC93A PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.059e-54
Identity = 130/445 (29.21%), Postives = 227/445 (51.01%), Query Frame = 0 
Query:   44 KNLAIITFAVFINFTGFSGLQNLQSSLHPE--IGFICLCILYAAFMVSCLFLPNLTVWKLGYKYTMVLGMNGYATFSMAQFYPKLWLMAISACIAGCASAIFWSSISSMLTLLATRHANDT-KTDFDSINQKFFAIFYFGFRMAHVIGNLISSVVLTKDSTTDSVSVNFTQPNLQ---CGIQNCPGQLTQNINVTLPKTDLTSSNVQQLFYIYLGTGIFGVIAVLLTLSNLKD---QSPVAHKTLK--RELGAVLVFLRNTTIWKLSVLPIGIGISLGFVYSDLTKAFVTCAFGVNNVGYSMMCFGASSCVSSFIIQSIVRKTGSFVIILIGWFVYMATIVWLFFWEISEQPLYVVFITISLLGFSDVAVFSQIHGFFGVMFPENKTEVFSVFKVFNSLGQASYFAYGNHLCIRTKLFIVIAFYLVGICLYAHVYRGFTKDIKKP 477
            +N+ +++F   + FT + GLQ+LQSSL+ E  +G   L  LY   ++S +FLP L + +LG K T++L M GY  FS+  F+   + +  ++ + G  +A  WS+  + LT+    HA    K   D +NQ +F IF+  F+ + V GNLISS+V  +  + +      T P  Q   CG  +C    T   +   P   L    V  L  IY G+G+  V+ +   L  ++D   +S    K++     L +     R+  +  L +LP+  G+  GF+ S+ T+++VTC  G+  VGY M+CF A+  + S +   + + TG  V+ ++G   +++ ++ L  W      L V F+   L G +D    +Q +  +GV+F ++K   F+ ++++ +LG    F Y   LC+  KL+I++    + +  Y  V    +K+  +P
Sbjct:    6 RNVLVVSFGFLLLFTAYGGLQSLQSSLYSEEGLGVTALSTLYGGMLLSSMFLPPLLIERLGCKGTIILSMCGYVAFSVGNFFASWYTLIPTSILLGLGAAPLWSAQCTYLTITGNTHAEKAGKRGKDMVNQ-YFGIFFLIFQSSGVWGNLISSLVFGQTPSQE------TLPEEQLTSCGASDCLMATTTTNSTQRPSQQL----VYTLLGIYTGSGVLAVLMIAAFLQPIRDVQRESEGEKKSVPFWSTLLSTFKLYRDKRLCLLILLPLYSGLQQGFLSSEYTRSYVTCTLGIQFVGYVMICFSATDALCSVLYGKVSQYTGRAVLYVLGAVTHVSCMIALLLWRPRADHLAVFFVFSGLWGVADAVWQTQNNALYGVLFEKSKEAAFANYRLWEALGFVIAFGYSMFLCVHVKLYILLGVLSLTMVAYGLVECVESKNPIRP 439
The following BLAST results are available for this feature:
BLAST of TCONS_00016887-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UN93A1.059e-5429.21Protein unc-93 homolog A OS=Homo sapiens GN=UNC93A... [more]
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