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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016483 ID=TCONS_00016483|Name=TCONS_00016483|organism=Clytia hemisphaerica|type=transcript|length=235bp
TAATAATATTGATAtaatcaaaaaataagaaaagaatgCCTGCATCCTGT
CCAACCTGCAAAAAACCGGTATATTTTGCACAACGGGTATTTTCAATGGG
AAAAGATTTCCACAAGACATGCTTCAAATGTGAAAATTGTTCAAAACCAC
TCGAGATAGGATCCCATTCAATGCACCAAGGAAAAGCATACTGCAAGGAG
ACACGATGCGTGGCTACTGCCAAATGATGAACttt Run BLAST on NCBI transcript from alignment at sc0000240:24519..25689- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016483 ID=TCONS_00016483|Name=TCONS_00016483|organism=Clytia hemisphaerica|type=transcript|length=1171bp|location=Sequence derived from alignment at sc0000240:24519..25689- (Clytia hemisphaerica)
TAATAATATTGATATAATCAAAAAATAAGAAAAGAATGCCTGCATCCTGT
CCAACCTGCAAAAAACCGGTATATTTTGGTAAGTACTCAACTTTTTAAAT
AAGCTTTTAAACCATGTTTAAACAAAGTTTGAGTCCGTACAGCTGAGATT
TGGACCAAATTCTAGAATATTCATTTATTTACTTAAATTTTAGACAAAAC
TTATGATCTTACGAATTTTTATCCAAACAATTACTTATTCTATATATTTA
TCAGGATTCGGAAACATTACAACCCTCAATTCCAACTGTTTATTTGCCCG
CCTATCTCGTCAGTCATTGGGATAAGAACTTTGTCCTTAAAAAGTTTTTG
TGAAAGATTCAATTTTTTAATTGTTCTATGGAAAAAACAAATTTTATGAG
AAGTTACTTTCAAAGCAATAGGATTTCTTCTTTCATCATCAGCACAACGG
GTATTTTCAATGGGAAAAGATTTCCACAAGACATGCTTCAAATGTGAAAA
TTGTTCAAAACCACTCGAGATAGGATCCCATTCAATGGTAAGTTGTAACA
AGTGTTTTTTTTAACCAGGGTGGACTAGCATATGGGTCTTTCTTTTCTTG
AAAACAAGAACGCGGGAATAGTGCTTATAAAGAGTTCTTATAAAGAATTT
ATTATGTTGCAAAAATCACCATTTTTGCGAAAATTGCTCCCGAGAAGAAA
ACATTTGTCCTCCGAAGACCAAAAAGGGGTGGCCTCTGTATCAAAATATC
CCTCAAATTTATAGTAGATGGGTACTAAAATACCGCTTCTCTAAAATGGG
GTGGTGGTATGCAGAAAATTCTTGAAAACCCTTCTGCCTGAGATTTTAGT
ACCGACTGGGGGGGGGGCTGTTATGGAGGGCATCAATGGAGGTCATCAAT
GGAGAGCATCAATTTGCAACTTTTTCTATAAAACCTTTTACCAATCAAAC
CTAGTACACTTAAACAGTGCAAACTCTTCAATCACCAATAAGGTGAGCGG
CCTCAGGACAAGTTGGAACTGTAGCGTTCTTTTTTTAACGGATTATGTAG
TTCATGTGTAGATGTTTCATTTTTGTCAATACTTATATTTTTTATGTTTT
GATTCTTAGCACCAAGGAAAAGCATACTGCAAGGAGACACGATGCGTGGC
TACTGCCAAATGATGAACTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016483-exon-sc0000240-1575043694:25612..25689 | TCONS_00016483-exon-sc0000240-1575043694:25612..25689 | Clytia hemisphaerica | exon |
| TCONS_00016483-exon-sc0000240-1575043694:25153..25247 | TCONS_00016483-exon-sc0000240-1575043694:25153..25247 | Clytia hemisphaerica | exon |
| TCONS_00016483-exon-sc0000240-1575043694:24519..24580 | TCONS_00016483-exon-sc0000240-1575043694:24519..24580 | Clytia hemisphaerica | exon |
| TCONS_00016483-exon-sc0000240-1510915933:25612..25689 | TCONS_00016483-exon-sc0000240-1510915933:25612..25689 | Clytia hemisphaerica | exon |
| TCONS_00016483-exon-sc0000240-1510915933:25153..25247 | TCONS_00016483-exon-sc0000240-1510915933:25153..25247 | Clytia hemisphaerica | exon |
| TCONS_00016483-exon-sc0000240-1510915933:24519..24580 | TCONS_00016483-exon-sc0000240-1510915933:24519..24580 | Clytia hemisphaerica | exon |
| TCONS_00016483-exon-sc0000240-1491911889:25612..25689 | TCONS_00016483-exon-sc0000240-1491911889:25612..25689 | Clytia hemisphaerica | exon |
| TCONS_00016483-exon-sc0000240-1491911889:25153..25247 | TCONS_00016483-exon-sc0000240-1491911889:25153..25247 | Clytia hemisphaerica | exon |
| TCONS_00016483-exon-sc0000240-1491911889:24519..24580 | TCONS_00016483-exon-sc0000240-1491911889:24519..24580 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000240 | supercontig | sc0000240:24519..25689 - |
Blast
The following BLAST results are available for this feature:
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