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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016396 ID=TCONS_00016396|Name=TCONS_00016396|organism=Clytia hemisphaerica|type=transcript|length=1473bp
CCCGGCACCCACTTTGCCTAAGTACTCTCCCCCTGGGCTCGCACTTGCAC
AGCCTCGCTCTCCTCCTCGTCCATGCTTACACTTACTACACGTTACAGTA
CTTTTGCGATATTGCAAAATCACGCACTAGGGGCATGTCTCCCTTAACGG
AAATTTCGAATGATCAAGATCTGCCATCTTTCTTTCTCGTCACGATTTGA
TCACGAACTGAAATCGTGATTGACCAAAGCAGTTGGCAGTGCACTCGTCA
AACCTCTCCTTGTGTCCTTGGCTTGGCTACAAGTCCTGCAAAGAGGCACC
ACACAACAATGGCATTTTCCTcgtttatataatttgaagaAGTGATAATT
AATTTTACTTTATGTTAAGACGTGGGATGGCctgaaaagatttaaaaaag
aaggtCCTAAACAACAGCCTAACAGTTAGGAGTTTTCACTTTCAGTTTTA
GTTCACAAGAAAGTCAAAACTGTGAAGGACGTTGCAAACTGTTTTATTTT
ATTGAGCGAGACAAAATAAATAATCTTATATCTTTCACATCATCAAAGAG
ACATAcaatcaaaccatcaaaaaggGGGCTAGAGAAAGATCTAaaacttt
tggttttgttttcttgatgatggaagaagagtaaatatgaaaaaagtgcT
GTAATTAATATTGCtggatttgttttttttttctatttggttgagttgca
ggaggctttgaggcctattttcgcaactatagacgctttcaatgagcgcc
ccgtcagcaccttggactgactacccaattcccctcacatcgcatgggtt
gacccgggcgaaggttcattcacttgccaagtgaaccgatgcgagtggga
atcgaacctcagtcgcctgtgcagtaaccaaggtcaatgatcactatacc
acagcgcctttCCTGTTGTTACTGGAACATTAAATACCGAAAgctggtct
aatatcgacatcccttgtccaattccgacacccttctttacgACTTTAGA
GAcagaaaatataagaaataatatgaaagtttgaatcaccgattgaaaaa
ggattattgctctctgaccactaaacaaagaaaaatagttttgacctttc
tatcaatttcagctgataaaaagggtgtcggaattagatgagggatgtca
atattagaccaacttttGGTATATAggttttgttcttttattttttttct
aaaagagtTGGGTATTTCACTGTTTTTCCTGAAATTCTACCTCACGTACG
GTaagtttctgcttgcgaaagtttgtacgcctaaactAGAATCTCAATCG
GTCGCTTGCTTGGATTaagtttgactggttcgattgttatttttgttcaa
TTGAGAATTGAGATGGTCATTGGAAACAAATCATCTGCTTTCAATTGTCA
TCATTTAACTGTTTAAAGACTGTAccatgagtggtcctaaatccgacagc
cctgccgatggggtctttcaaag Run BLAST on NCBI transcript from alignment at sc0000233:397281..398753 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016396 ID=TCONS_00016396|Name=TCONS_00016396|organism=Clytia hemisphaerica|type=transcript|length=1473bp|location=Sequence derived from alignment at sc0000233:397281..398753 (Clytia hemisphaerica)
ctttgaaagaccccatcggcagggctgtcggatttaggaccactcatggT
ACAGTCTTTAAACAGTTAAATGATGACAATTGAAAGCAGATGATTTGTTT
CCAATGACCATCTCAATTCTCAAttgaacaaaaataacaatcgaaccagt
caaacttAATCCAAGCAAGCGACCGATTGAGATTCTagtttaggcgtaca
aactttcgcaagcagaaacttACCGTACGTGAGGTAGAATTTCAGGAAAA
ACAGTGAAATACCCAactcttttagaaaaaaaataaaagaacaaaaccTA
TATACCaaaagttggtctaatattgacatccctcatctaattccgacacc
ctttttatcagctgaaattgatagaaaggtcaaaactatttttctttgtt
tagtggtcagagagcaataatcctttttcaatcggtgattcaaactttca
tattatttcttatattttctgTCTCTAAAGTcgtaaagaagggtgtcgga
attggacaagggatgtcgatattagaccagcTTTCGGTATTTAATGTTCC
AGTAACAACAGGaaaggcgctgtggtatagtgatcattgaccttggttac
tgcacaggcgactgaggttcgattcccactcgcatcggttcacttggcaa
gtgaatgaaccttcgcccgggtcaacccatgcgatgtgaggggaattggg
tagtcagtccaaggtgctgacggggcgctcattgaaagcgtctatagttg
cgaaaataggcctcaaagcctcctgcaactcaaccaaatagaaaaaaaaa
acaaatccaGCAATATTAATTACAgcacttttttcatatttactcttctt
ccatcatcaagaaaacaaaaccaaaagtttTAGATCTTTCTCTAGCCCcc
tttttgatggtttgattgTATGTCTCTTTGATGATGTGAAAGATATAAGA
TTATTTATTTTGTCTCGCTCAATAAAATAAAACAGTTTGCAACGTCCTTC
ACAGTTTTGACTTTCTTGTGAACTAAAACTGAAAGTGAAAACTCCTAACT
GTTAGGCTGTTGTTTAGGaccttcttttttaaatcttttcagGCCATCCC
ACGTCTTAACATAAAGTAAAATTAATTATCACTtcttcaaattatataaa
cgAGGAAAATGCCATTGTTGTGTGGTGCCTCTTTGCAGGACTTGTAGCCA
AGCCAAGGACACAAGGAGAGGTTTGACGAGTGCACTGCCAACTGCTTTGG
TCAATCACGATTTCAGTTCGTGATCAAATCGTGACGAGAAAGAAAGATGG
CAGATCTTGATCATTCGAAATTTCCGTTAAGGGAGACATGCCCCTAGTGC
GTGATTTTGCAATATCGCAAAAGTACTGTAACGTGTAGTAAGTGTAAGCA
TGGACGAGGAGGAGAGCGAGGCTGTGCAAGTGCGAGCCCAGGGGGAGAGT
ACTTAGGCAAAGTGGGTGCCGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016396-exon-sc0000233-1491911889:397281..398753 | TCONS_00016396-exon-sc0000233-1491911889:397281..398753 | Clytia hemisphaerica | exon |
| TCONS_00016396-exon-sc0000233-1510915933:397281..398753 | TCONS_00016396-exon-sc0000233-1510915933:397281..398753 | Clytia hemisphaerica | exon |
| TCONS_00016396-exon-sc0000233-1575043694:397281..398753 | TCONS_00016396-exon-sc0000233-1575043694:397281..398753 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000233 | supercontig | sc0000233:397281..398753 . |
Blast
The following BLAST results are available for this feature:
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