TCONS_00016308 (transcript) - C. hemisphaerica

Overview
NameTCONS_00016308
Unique NameTCONS_00016308
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2928

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00016308 ID=TCONS_00016308|Name=TCONS_00016308|organism=Clytia hemisphaerica|type=transcript|length=2928bp
ATAAAAACTAAATTAATTTAAAACAATCAAAGTAAATATACTTTTGAAGC
AAgctcggaaaaaaaattcaaggagCAAGACGTAGTATGAGCAATGAAGA
AAGATTCAAAATGTTCTTTCTGTTTATGACCTGCTTGTTGTCGGACTTTG
TCCCACATTGTGTTCACGTACTTTTAACTTAAGTggaaatttgctatata
aatcataTCTCAGAAACGgtgattatgtggtgtgtttttGTATGGTTTAA
CAGCTCTTGATCAAACATTTATTCTGGATAATGGAATTTAATCAAATGAA
GATTTGGACAATTGGACTTTTTCATAGACAGTACATCAAGATGTTTGCTc
ctttatcttttcaaaacatatCTGTCAAACTATTTTGCAATCATAAAGAC
TTTGTACAAGTAGCAAAAGCAGAACAAGAAATCGATGCCAAGTTACTTTG
GACATCCTCTATAACTCCAACACAATGGCACACTAGAATTTCATTGAACA
TTCTTGTAGGGATGAGAGATTCCGGGGTTCCACTTTTCATGGCGTTTCTC
AAAAGTGTTTTCGCGTTGTGTTATACAATCGTTTGAAGTCCAAGAGGTTA
ATCTGTTGAGTTGGCAATGGAAAGTTGAAGAAGCTgtacattgttttttt
cttgggCCCTTGATTTTTAACCTTGAACCAGTGGAAGGATTGACTAGTAG
GGTGATGGAGATTAACGATGAGAAcgattttaatttaaaaaaatgttaat
ataatttttttgaaacttgttTTTGAAATACTTATACCTTCAAAGCCTTT
TTGTGGGATACAAATATTAATCAATCATATGTGAGCTTTCAAAAGTCTAG
caattccatttttttttagatatgCAAAAAGagcaaatttaaaaagaaat
tgaaattaacaATTTGTTAAATGTCGGTCATTCCAACTGGTTATCAAAAT
GAGATTGCTGGTCCAGATAAAAAGCTTTTCGAATGTCCAATTTGTTTGTG
TATCATTCGTAAAGCAACTGAACTTCCCTGTGAACACTTGATGTGTTCTG
ACTGTTTGCTTCACTATGAAAacgaagaaattcaaagaatcaAAAGAGAA
AGGCTCAACAAGAGTGCTACTGTTTATCGATGTTCGATTTGTCAAACTCC
TTATCAAAGAAATAAGAAATACGCAGTGAAATCAGTGGATCGAATCATAC
AAAGAGATATTCCTGTAAATTGTTTACAAAAAGATTGCACTTGGACtggc
tctctgcaagattatgagGAACACAAGTCAATTTGTTTGGAGAAGGTTCC
TTGTCAATATTTTGACCTTGGGTGCTTAGAACTGGTTGCACAAAGAAATT
TGAAACAACATAATGAAACCTTTGGAGATTTTCACCAAACTTTAATTTTG
GACAATGTTAAACTTTTGATGAAGGAAAGAGCTCAAGATCGGGAGAGGAT
TCAACAACTGCAAAGCCaactggaaaaaaatgacagacAACTCGGAAATT
TATCTAAAGAATTAAAGAACCAAACTGATCGCCAActgaatttacaaaaa
agtttagaacaatACAACAAAAGCCTTAAATCAATCGAAAAAGAAATCGA
CGATATGAAAATAATGCTCAAAAATCAAACGAAAGAAtattcagaaaaag
aaaatgatcgTGTATCGAGAGACAAAGAATCTTTTATGAAGAAATTAGAA
GACCATCGCAACCAAATTAAGAAACAATCTAATAAATCACAGcaattaga
aaaagaaaatgcaaaTTTGAGAGAGAAGTTGACAAGTCAAGGTAAAAGGA
TCCAGCAGCTCGAAGAGAAGTCTCTTAACCAAGGTAAGAAAGATCTCCAT
AAAAGCTTGGACGTTCATTCTAAAGATATTTCGGAATTGAAGACTTTTGC
AGAGCAGATGAGCTCTTTCCTCCATCGATTATCGTCATGGGAATTCATGA
AAGAAAAATTCTATAGATTCTTTCGCGAAAACGATTACGAAGATGATATA
GGTTTGAAAGAATGGCGAAATTTCTCGGATAAAGTTCTCTCTAATGAAGA
GAATGTGGATTGTGTttatttgaaagaaatgaaGGATGCCATCAAAGGGT
ACAGCCATCACCTCTACCCTGGCTGGTACACTCGGTTGAACCTTTTGGCA
AATAAACTGGACACTGGTGTTATTGATCGCCATTATCATCTCAAACTCTA
CGCACCGTGCCATTTCGATTTCATATCTGTTAAAGCGTTCAGTGATGTCA
TCGGTTTTGAGAAGGAAATCAACAGTTATCATAAATGGTGCAGATATTCA
ATTGATGTGGCAAGTTATCACGACTCTGAAGCAAATTGCTTTCACGTTGC
TTTAGTTTGTGTTGGTGTGAATAATATTAGAATGTTTAATTGGTTTGATG
AAGCAGTCGAGATACGAATTCCTGTCAATGGAAATATTGTTGACTTGAGT
CTATTCTCAAATCATTCTTGTGTAGACGAATGTCGAATGATATTCCAATT
AAAAAACATTTCTCCTTGGgaaaagtttaaagtttttgtCGGCTGATAGA
TAAACAGTTTCCTCTACTTTCTatagggcttttccagaaaaaattcgttc
atggggggtggaggatatattatttttctgtgatttacccctggacattt
cgatttttcaccccctggacacgtgttttacccctggacaagcatcaagt
tgaccccctggacacaaatATTTATCCCTGGACATCGCAgattcacccca
tggacattgcagtttttcagggttttttcaatacccctggacaatatatc
ctccaccccccatgaatggtttttttctggaagagcccattcgaAACTTA
AGGCagaattcgaaaataatttgaaaacaaatacaCAAACCGAAaaacga
gaagaaaaaaaaacgaaatgaaAAACAA
Run BLAST on NCBI

protein sequence of TCONS_00016308-protein

>TCONS_00016308-protein ID=TCONS_00016308-protein|Name=TCONS_00016308-protein|organism=Clytia hemisphaerica|type=polypeptide|length=541bp
MSVIPTGYQNEIAGPDKKLFECPICLCIIRKATELPCEHLMCSDCLLHYE
NEEIQRIKRERLNKSATVYRCSICQTPYQRNKKYAVKSVDRIIQRDIPVN
CLQKDCTWTGSLQDYEEHKSICLEKVPCQYFDLGCLELVAQRNLKQHNET
FGDFHQTLILDNVKLLMKERAQDRERIQQLQSQLEKNDRQLGNLSKELKN
QTDRQLNLQKSLEQYNKSLKSIEKEIDDMKIMLKNQTKEYSEKENDRVSR
DKESFMKKLEDHRNQIKKQSNKSQQLEKENANLREKLTSQGKRIQQLEEK
SLNQGKKDLHKSLDVHSKDISELKTFAEQMSSFLHRLSSWEFMKEKFYRF
FRENDYEDDIGLKEWRNFSDKVLSNEENVDCVYLKEMKDAIKGYSHHLYP
GWYTRLNLLANKLDTGVIDRHYHLKLYAPCHFDFISVKAFSDVIGFEKEI
NSYHKWCRYSIDVASYHDSEANCFHVALVCVGVNNIRMFNWFDEAVEIRI
PVNGNIVDLSLFSNHSCVDECRMIFQLKNISPWEKFKVFVG
Run BLAST on NCBI

transcript from alignment at sc0000232:229782..235500-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00016308 ID=TCONS_00016308|Name=TCONS_00016308|organism=Clytia hemisphaerica|type=transcript|length=5719bp|location=Sequence derived from alignment at sc0000232:229782..235500- (Clytia hemisphaerica)
ATAAAAACTAAATTAATTTAAAACAATCAAAGTAAATATACTTTTGAAGC AAGCTCGGAAAAAAAATTCAAGGAGCAAGACGTAGTATGAGCAATGAAGA AAGATTCAAAATGTTCTTTCTGTTTATGACCTGCTTGTTGTCGGACTTTG TCCCACATTGTGTTCACGTACTTTTAACTTAAGTGGAAATTTGCTATATA AATCATATCTCAGAAACGGTGATTATGTGGTGTGTTTTTGTATGGTTTAA CAGCTCTTGATCAAACATTTATTCTGGATAATGGAATTTAATCAAATGAA GATTTGGACAATTGGACTTTTTCATAGACAGTACATCAAGATGTTTGCTC CTTTATCTTTTCAAAACATATCTGTCAAACTATTTTGCAATCATAAAGAC TTTGTACAAGTAGCAAAAGCAGAACAAGAAATCGATGCCAAGTTACTTTG GACATCCTCTATAACTCCAACACAATGGCACACTAGAATTTCATTGAACA TTCTTGTAGGGATGAGAGATTCCGGGGTTCCACTTTTCATGGCGTTTCTC AAAAGTGTTTTCGCGTTGTGTTATACAATCGTTTGAAGTCCAAGAGGTTA ATCTGTTGAGTTGGCAATGGAAAGTTGAAGAAGCTGTACATTGTTTTTTT CTTGGGCCCTTGATTTTTAACCTTGAACCAGTGGAAGGATTGACTAGTAG GGTGATGGAGATTAACGATGAGAACGATTTTAATTTAAAAAAATGTTAAT ATAATTTTTTTGAAACTTGTTTTTGAAATACTTATACCTTCAAAGCCTTT TTGTGGGATACAAATATTAATCAATCATATGTGAGCTTTCAAAAGTCTAG CAATTCCATTTTTTTTTAGATATGCAAAAAGAGCAAATTTAAAAAGAAAT TGAAATTAACAATTTGTTAAATGTCGGTCATTCCAACTGGTTATCAAAAT GAGATTGCTGGTCCAGATAAAAAGCTTTTCGAATGTCCAATTTGTTTGTG TATCATTCGTAAAGCAACTGAACTTCCCTGTGAACACTTGATGTGTTCTG ACTGTTTGCTTCACTATGAAAACGAAGAAATTCAAAGAATCAAAAGGTAA AAAAGTTGTTTTACGTACAATTCAATTCCGAAATTTAAACGAAGGCCTGG CAAATCCAATCCATAAACTTCTTTTTTATTTCAACGTCAATACATAGAGC TGCTTGCTGTTATTGCAAATTGTTACCCATCATACTAACTATCTGTTCGG GCAATGCCGTAAAATATTGACGTATTCCTCACAAAATCGGTATAATAGGG TTAATAATTACTTCAACAAAAATGACCATTCGTTTCAATTCTTACTAAAC ATATTCAACGTCAAGGCGTTCTAAATTGATGGTCTACATTTATGTAGTTT TATAAAGAAGACATTCCATTGTCAAATAAAACAATGAACTGGCGTATATC GCGATTTTTTCTTTTTTAATGATTCGTTTTAACCACTAATCTCGAACTAC TTGACTGGATCGGGCAACCCGTATATAGGCAGCGTGCCCAGGTTTAGAGC TGAATGTTTTGAAATTGGAACGTTCGAAAATCTAAGATGGGAAAACAACA TTGCGGACTAGTCGTAGTCGGCTTCAAAAGTGGACACACTTCCACGGGAA TTCAGTGAGCAGNGATGGGAAAACAACATTGTGGACTAGTCGTAGTCGGC TTCAAAAGTGGACACACTTCCACGGGAATTCAGTGAGCAGTCAGCCTATC TAGTGTGTAAAAGAATATGATATCTGTGTTTTAACAGCTGTAATGTTTTC GTAACGATTCGGACCTCAATTTAAATATTGTTAATCTGGGCTTTAATTTC AGAGAAAGGCTCAACAAGAGTGCTACTGTTTATCGATGTTCGATTTGTCA AACTCCTTATCAAAGAAATAAGGTTAGTGTCTCATTGGATGTAGTTGCGT TTGCCTGTATTTGTAGTGGTACCTGTCTCTGAAATTACTTTTTGATATTT TCATTCAAACAACAAGGATTTAACAAAGTAAAACTCTTTGGGAGCGGACG ATCTTAAAGTCTGTCTCAAAGTTGAATGCAGCAGAGACAAAGTTCTGAAA CTGTGGAGTGAATCCGAATTAGATATAGACTAGACGGTTACCGTCGTCGC AAACGCTGCTTCAGCTTTCACATCAAAAGCCCTTAGAATGATAAAGATGG TACATTTGATCCTCTCTAATTCTATTGCAGAGGCTTCTTCGATTTGAACG TCAAATCCCTTTTTGGACGGGGGTTTTACCGGAATGAAGTGCTAATTTTT TCACTCAATCATGTATGAAAAATGAAAGTTTAAACACACAGTTAAAACTT CGACTTTAAGAACTATGATAAAATTTTGACAAGAGAAAATTCTTCAAAAA TATCTATTCAATCGAAATTTTATCAATGATTGACTTTGAAAATAATAAAA AACTAGCCCTTTTCATGTAAACCAGGGAAGGTTTTAAACTGTATTTTTTG ACTGAATAAATGTATCTTTTGAATTTTTCTTCACATTGATGCAATTGAAC AATTAGTTTACTAAAATGGTGATCAAAGCATAATTCTGCAAGCATTTAGA ATTTTTTTTATTTGATAATTTTCATATTCTTAAAATTTATCTTTTCAACC ATCGCAATTAAGTGTTAGAATTTTATCAAAAGTTACTCCCATTTTAAGAA ATACGCAGTGAAATCAGTGGATCGAATCATACAAAGAGATATTCCTGTAA ATTGTTTACAAAAAGATTGCACTTGGACTGGCTCTCTGCAAGATTATGAG GTATATATAAAAAAACGTATAATTATAAATATATTAGTGCCTTTTTATGT TTCATCTTTATTTTATTTAGTATTTTCAACACTTTCTCTCCTTGAGGTCA GATCTCTGATCTTCACCATATATATATATTTTTTTGAAAAGTATGAAATT AATTTGAAAATGAGCTTACCTACTAGACATGCCCCATTGGGTTGTAAAAA TATTTTTGATACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTGAAACTGA TTTTCTCGAAATCTAGAAATTTTAGAAGAACCATTCCTATTTCATTGGAG AGAAGAAAGATAAACTTAAGTTATGATGGGTCATTTATTGAATTCGGTTC ATTAGATCGAAAGTTATACTCAATTGATTAAAAAAGTTACTTTCAGAAAG TGCTCGAAAACGTTAAAAATCGACCTATCAACTTTTCATTTTAAAATTGC CAATCGCAATAGGCTTTACATGATTAAGAACATTTTTCAGTAATCAAACA CATAAATTTTGAAACTGATGGGTTCGAAAGGGTTTAAAATCTTCATCAAA ACCACTTAATTTACTTTTACCGAAATTTTCCTAAGATTTTTGGTACAAGA ATGGATTTAAAGTCTATGTAAGGCTGGATGTACCTCGAAACCCATATTTG ATGTATTTTCATGAATTTTACGAGATTTTTGGGTTTTTTCGACGAATTTT ATTCCTTTCATTGAAATTCGACCTTCCTCTATATTATAACAAAAGGTCAT TTAGACAGCTAATTATCATTTTTGATGCCTGAAACGAAAATACTGATGCA TCGTGTAATTATGCTTCTGTTTAATTTGATAGGTCGATTTTTAACGTTTT TGAGCACTTTCAGAAAATAACTTTTCTATTCAATTGAGTATAACTTTCGA TCTAATGAACCGAATTCAATAAATGACCCATCATAACTTAAGTTTATCTT TCTTCTCTCCAATGAAATAGGAATGGTTCTTCTAAAATTTCTAGATTTCG AGAAAATCAGTTTTAAATAGGGAATCTTTTTTGTGGCGCACCCGGTATAA GCTTTTGGAAGCTTTTTTGCACTGATTTTTAACCGAAGCAATACTTTTTG TGCTGATTTTTAACCGGAGCAATACTTTTTAGGAACACAAGTCAATTTGT TTGGAGAAGGTTCCTTGTCAATATTTTGACCTTGGGTGCTTAGAACTGGT AATTTTAATTATTCTCTACTTATTAACATTTCGATAGTTTTTTATTTCAC TTTGTGTAGTGTAAACTTGTGACGGGAAAATTTAAGTAGCTTCTTTAAAC CGTTTCACCGCTTAATCTTTTATAGGTTGCACAAAGAAATTTGAAACAAC ATAATGAAACCTTTGGAGATTTTCACCAAACTTTAATTTTGGACAATGTT AAACTTTTGATGAAGGAAAGAGCTCAAGATCGGGAGAGGATTCAACAACT GCAAAGCCAACTGGAAAAAAATGACAGACAACTCGGAAATTTATCTAAAG AATTAAAGAACCAAACTGATCGCCAACTGAATTTACAAAAAAGTTTAGAA CAATACAACAAAAGCCTTAAATCAATCGAAAAAGAAATCGACGATATGAA AATAATGCTCAAAAATCAAACGAAAGAATATTCAGAAAAAGAAAATGATC GTGTATCGAGAGACAAAGAATCTTTTATGAAGAAATTAGAAGACCATCGC AACCAAATTAAGAAACAATCTAATAAATCACAGCAATTAGAAAAAGAAAA TGCAAATTTGAGAGAGAAGTTGACAAGTCAAGGTAAAAGGATCCAGCAGC TCGAAGAGAAGTCTCTTAACCAAGGTAAGAAAGATCTCCATAAAAGCTTG GACGTTCATTCTAAAGATATTTCGGAATTGAAGACTTTTGCAGAGCAGAT GAGCTCTTTCCTCCATCGATTATCGTCATGGGAATTCATGAAAGAAAAAT TCTATAGATTCTTTCGCGAAAACGATTACGAAGATGATATAGGTTTGAAA GAATGGCGAAATTTCTCGGATAAAGTTCTCTCTAATGAAGAGAATGTGGA TTGTGTTTATTTGAAAGAAATGAAGGATGCCATCAAAGGGTACAGCCATC ACCTCTACCCTGGCTGGTACACTCGGTTGAACCTTTTGGCAAATAAACTG GACACTGGTGTTATTGATCGCCATTATCATCTCAAACTCTACGCACCGTG CCATTTCGATTTCATATCTGTTAAAGCGTTCAGTGATGTCATCGGTTTTG AGAAGGAAATCAACAGTTATCATAAATGGTGCAGATATTCAATTGATGTG GCAAGTTATCACGACTCTGAAGCAAATTGCTTTCACGTTGCTTTAGTTTG TGTTGGTGTGAATAATATTAGAATGTTTAATTGGTTTGATGAAGCAGTCG AGATACGAATTCCTGTCAATGGAAATATTGTTGACTTGAGTCTATTCTCA AATCATTCTTGTGTAGACGAATGTCGAATGATATTCCAATTAAAAAACAT TTCTCCTTGGGAAAAGTTTAAAGTTTTTGTCGGCTGATAGATAAACAGTT TCCTCTACTTTCTATAGGGCTTTTCCAGAAAAAATTCGTTCATGGGGGGT GGAGGATATATTATTTTTCTGTGATTTACCCCTGGACATTTCGATTTTTC ACCCCCTGGACACGTGTTTTACCCCTGGACAAGCATCAAGTTGACCCCCT GGACACAAATATTTATCCCTGGACATCGCAGATTCACCCCATGGACATTG CAGTTTTTCAGGGTTTTTTCAATACCCCTGGACAATATATCCTCCACCCC CCATGAATGGTTTTTTTCTGGAAGAGCCCATTCGAAACTTAAGGCAGAAT TCGAAAATAATTTGAAAACAAATACACAAACCGAAAAACGAGAAGAAAAA AAAACGAAATGAAAAACAA

Coding sequence (CDS) from alignment at sc0000232:229782..235500-

>TCONS_00016308 ID=TCONS_00016308|Name=TCONS_00016308|organism=Clytia hemisphaerica|type=CDS|length=8130bp|location=Sequence derived from alignment at sc0000232:229782..235500- (Clytia hemisphaerica)
GTTGCACAAAGAAATTTGAAACAACATAATGAAACCTTTGGAGATTTTCA
CCAAACTTTAATTTTGGACAATGTTAAACTTTTGATGAAGGAAAGAGCTC
AAGATCGGGAGAGGATTCAACAACTGCAAAGCCAACTGGAAAAAAATGAC
AGACAACTCGGAAATTTATCTAAAGAATTAAAGAACCAAACTGATCGCCA
ACTGAATTTACAAAAAAGTTTAGAACAATACAACAAAAGCCTTAAATCAA
TCGAAAAAGAAATCGACGATATGAAAATAATGCTCAAAAATCAAACGAAA
GAATATTCAGAAAAAGAAAATGATCGTGTATCGAGAGACAAAGAATCTTT
TATGAAGAAATTAGAAGACCATCGCAACCAAATTAAGAAACAATCTAATA
AATCACAGCAATTAGAAAAAGAAAATGCAAATTTGAGAGAGAAGTTGACA
AGTCAAGGTAAAAGGATCCAGCAGCTCGAAGAGAAGTCTCTTAACCAAGG
TAAGAAAGATCTCCATAAAAGCTTGGACGTTCATTCTAAAGATATTTCGG
AATTGAAGACTTTTGCAGAGCAGATGAGCTCTTTCCTCCATCGATTATCG
TCATGGGAATTCATGAAAGAAAAATTCTATAGATTCTTTCGCGAAAACGA
TTACGAAGATGATATAGGTTTGAAAGAATGGCGAAATTTCTCGGATAAAG
TTCTCTCTAATGAAGAGAATGTGGATTGTGTTTATTTGAAAGAAATGAAG
GATGCCATCAAAGGGTACAGCCATCACCTCTACCCTGGCTGGTACACTCG
GTTGAACCTTTTGGCAAATAAACTGGACACTGGTGTTATTGATCGCCATT
ATCATCTCAAACTCTACGCACCGTGCCATTTCGATTTCATATCTGTTAAA
GCGTTCAGTGATGTCATCGGTTTTGAGAAGGAAATCAACAGTTATCATAA
ATGGTGCAGATATTCAATTGATGTGGCAAGTTATCACGACTCTGAAGCAA
ATTGCTTTCACGTTGCTTTAGTTTGTGTTGGTGTGAATAATATTAGAATG
TTTAATTGGTTTGATGAAGCAGTCGAGATACGAATTCCTGTCAATGGAAA
TATTGTTGACTTGAGTCTATTCTCAAATCATTCTTGTGTAGACGAATGTC
GAATGATATTCCAATTAAAAAACATTTCTCCTTGGGAAAAGTTTAAAGTT
TTTGTCGGCTGAGAACACAAGTCAATTTGTTTGGAGAAGGTTCCTTGTCA
ATATTTTGACCTTGGGTGCTTAGAACTGAAATACGCAGTGAAATCAGTGG
ATCGAATCATACAAAGAGATATTCCTGTAAATTGTTTACAAAAAGATTGC
ACTTGGACTGGCTCTCTGCAAGATTATGAGAGAAAGGCTCAACAAGAGTG
CTACTGTTTATCGATGTTCGATTTGTCAAACTCCTTATCAAAGAAATAAG
ATGTCGGTCATTCCAACTGGTTATCAAAATGAGATTGCTGGTCCAGATAA
AAAGCTTTTCGAATGTCCAATTTGTTTGTGTATCATTCGTAAAGCAACTG
AACTTCCCTGTGAACACTTGATGTGTTCTGACTGTTTGCTTCACTATGAA
AACGAAGAAATTCAAAGAATCAAAAGGTTGCACAAAGAAATTTGAAACAA
CATAATGAAACCTTTGGAGATTTTCACCAAACTTTAATTTTGGACAATGT
TAAACTTTTGATGAAGGAAAGAGCTCAAGATCGGGAGAGGATTCAACAAC
TGCAAAGCCAACTGGAAAAAAATGACAGACAACTCGGAAATTTATCTAAA
GAATTAAAGAACCAAACTGATCGCCAACTGAATTTACAAAAAAGTTTAGA
ACAATACAACAAAAGCCTTAAATCAATCGAAAAAGAAATCGACGATATGA
AAATAATGCTCAAAAATCAAACGAAAGAATATTCAGAAAAAGAAAATGAT
CGTGTATCGAGAGACAAAGAATCTTTTATGAAGAAATTAGAAGACCATCG
CAACCAAATTAAGAAACAATCTAATAAATCACAGCAATTAGAAAAAGAAA
ATGCAAATTTGAGAGAGAAGTTGACAAGTCAAGGTAAAAGGATCCAGCAG
CTCGAAGAGAAGTCTCTTAACCAAGGTAAGAAAGATCTCCATAAAAGCTT
GGACGTTCATTCTAAAGATATTTCGGAATTGAAGACTTTTGCAGAGCAGA
TGAGCTCTTTCCTCCATCGATTATCGTCATGGGAATTCATGAAAGAAAAA
TTCTATAGATTCTTTCGCGAAAACGATTACGAAGATGATATAGGTTTGAA
AGAATGGCGAAATTTCTCGGATAAAGTTCTCTCTAATGAAGAGAATGTGG
ATTGTGTTTATTTGAAAGAAATGAAGGATGCCATCAAAGGGTACAGCCAT
CACCTCTACCCTGGCTGGTACACTCGGTTGAACCTTTTGGCAAATAAACT
GGACACTGGTGTTATTGATCGCCATTATCATCTCAAACTCTACGCACCGT
GCCATTTCGATTTCATATCTGTTAAAGCGTTCAGTGATGTCATCGGTTTT
GAGAAGGAAATCAACAGTTATCATAAATGGTGCAGATATTCAATTGATGT
GGCAAGTTATCACGACTCTGAAGCAAATTGCTTTCACGTTGCTTTAGTTT
GTGTTGGTGTGAATAATATTAGAATGTTTAATTGGTTTGATGAAGCAGTC
GAGATACGAATTCCTGTCAATGGAAATATTGTTGACTTGAGTCTATTCTC
AAATCATTCTTGTGTAGACGAATGTCGAATGATATTCCAATTAAAAAACA
TTTCTCCTTGGGAAAAGTTTAAAGTTTTTGTCGGCTGAGAACACAAGTCA
ATTTGTTTGGAGAAGGTTCCTTGTCAATATTTTGACCTTGGGTGCTTAGA
ACTGAAATACGCAGTGAAATCAGTGGATCGAATCATACAAAGAGATATTC
CTGTAAATTGTTTACAAAAAGATTGCACTTGGACTGGCTCTCTGCAAGAT
TATGAGAGAAAGGCTCAACAAGAGTGCTACTGTTTATCGATGTTCGATTT
GTCAAACTCCTTATCAAAGAAATAAGATGTCGGTCATTCCAACTGGTTAT
CAAAATGAGATTGCTGGTCCAGATAAAAAGCTTTTCGAATGTCCAATTTG
TTTGTGTATCATTCGTAAAGCAACTGAACTTCCCTGTGAACACTTGATGT
GTTCTGACTGTTTGCTTCACTATGAAAACGAAGAAATTCAAAGAATCAAA
AGGTTGCACAAAGAAATTTGAAACAACATAATGAAACCTTTGGAGATTTT
CACCAAACTTTAATTTTGGACAATGTTAAACTTTTGATGAAGGAAAGAGC
TCAAGATCGGGAGAGGATTCAACAACTGCAAAGCCAACTGGAAAAAAATG
ACAGACAACTCGGAAATTTATCTAAAGAATTAAAGAACCAAACTGATCGC
CAACTGAATTTACAAAAAAGTTTAGAACAATACAACAAAAGCCTTAAATC
AATCGAAAAAGAAATCGACGATATGAAAATAATGCTCAAAAATCAAACGA
AAGAATATTCAGAAAAAGAAAATGATCGTGTATCGAGAGACAAAGAATCT
TTTATGAAGAAATTAGAAGACCATCGCAACCAAATTAAGAAACAATCTAA
TAAATCACAGCAATTAGAAAAAGAAAATGCAAATTTGAGAGAGAAGTTGA
CAAGTCAAGGTAAAAGGATCCAGCAGCTCGAAGAGAAGTCTCTTAACCAA
GGTAAGAAAGATCTCCATAAAAGCTTGGACGTTCATTCTAAAGATATTTC
GGAATTGAAGACTTTTGCAGAGCAGATGAGCTCTTTCCTCCATCGATTAT
CGTCATGGGAATTCATGAAAGAAAAATTCTATAGATTCTTTCGCGAAAAC
GATTACGAAGATGATATAGGTTTGAAAGAATGGCGAAATTTCTCGGATAA
AGTTCTCTCTAATGAAGAGAATGTGGATTGTGTTTATTTGAAAGAAATGA
AGGATGCCATCAAAGGGTACAGCCATCACCTCTACCCTGGCTGGTACACT
CGGTTGAACCTTTTGGCAAATAAACTGGACACTGGTGTTATTGATCGCCA
TTATCATCTCAAACTCTACGCACCGTGCCATTTCGATTTCATATCTGTTA
AAGCGTTCAGTGATGTCATCGGTTTTGAGAAGGAAATCAACAGTTATCAT
AAATGGTGCAGATATTCAATTGATGTGGCAAGTTATCACGACTCTGAAGC
AAATTGCTTTCACGTTGCTTTAGTTTGTGTTGGTGTGAATAATATTAGAA
TGTTTAATTGGTTTGATGAAGCAGTCGAGATACGAATTCCTGTCAATGGA
AATATTGTTGACTTGAGTCTATTCTCAAATCATTCTTGTGTAGACGAATG
TCGAATGATATTCCAATTAAAAAACATTTCTCCTTGGGAAAAGTTTAAAG
TTTTTGTCGGCTGAGAACACAAGTCAATTTGTTTGGAGAAGGTTCCTTGT
CAATATTTTGACCTTGGGTGCTTAGAACTGAAATACGCAGTGAAATCAGT
GGATCGAATCATACAAAGAGATATTCCTGTAAATTGTTTACAAAAAGATT
GCACTTGGACTGGCTCTCTGCAAGATTATGAGAGAAAGGCTCAACAAGAG
TGCTACTGTTTATCGATGTTCGATTTGTCAAACTCCTTATCAAAGAAATA
AGATGTCGGTCATTCCAACTGGTTATCAAAATGAGATTGCTGGTCCAGAT
AAAAAGCTTTTCGAATGTCCAATTTGTTTGTGTATCATTCGTAAAGCAAC
TGAACTTCCCTGTGAACACTTGATGTGTTCTGACTGTTTGCTTCACTATG
AAAACGAAGAAATTCAAAGAATCAAAAGGTTGCACAAAGAAATTTGAAAC
AACATAATGAAACCTTTGGAGATTTTCACCAAACTTTAATTTTGGACAAT
GTTAAACTTTTGATGAAGGAAAGAGCTCAAGATCGGGAGAGGATTCAACA
ACTGCAAAGCCAACTGGAAAAAAATGACAGACAACTCGGAAATTTATCTA
AAGAATTAAAGAACCAAACTGATCGCCAACTGAATTTACAAAAAAGTTTA
GAACAATACAACAAAAGCCTTAAATCAATCGAAAAAGAAATCGACGATAT
GAAAATAATGCTCAAAAATCAAACGAAAGAATATTCAGAAAAAGAAAATG
ATCGTGTATCGAGAGACAAAGAATCTTTTATGAAGAAATTAGAAGACCAT
CGCAACCAAATTAAGAAACAATCTAATAAATCACAGCAATTAGAAAAAGA
AAATGCAAATTTGAGAGAGAAGTTGACAAGTCAAGGTAAAAGGATCCAGC
AGCTCGAAGAGAAGTCTCTTAACCAAGGTAAGAAAGATCTCCATAAAAGC
TTGGACGTTCATTCTAAAGATATTTCGGAATTGAAGACTTTTGCAGAGCA
GATGAGCTCTTTCCTCCATCGATTATCGTCATGGGAATTCATGAAAGAAA
AATTCTATAGATTCTTTCGCGAAAACGATTACGAAGATGATATAGGTTTG
AAAGAATGGCGAAATTTCTCGGATAAAGTTCTCTCTAATGAAGAGAATGT
GGATTGTGTTTATTTGAAAGAAATGAAGGATGCCATCAAAGGGTACAGCC
ATCACCTCTACCCTGGCTGGTACACTCGGTTGAACCTTTTGGCAAATAAA
CTGGACACTGGTGTTATTGATCGCCATTATCATCTCAAACTCTACGCACC
GTGCCATTTCGATTTCATATCTGTTAAAGCGTTCAGTGATGTCATCGGTT
TTGAGAAGGAAATCAACAGTTATCATAAATGGTGCAGATATTCAATTGAT
GTGGCAAGTTATCACGACTCTGAAGCAAATTGCTTTCACGTTGCTTTAGT
TTGTGTTGGTGTGAATAATATTAGAATGTTTAATTGGTTTGATGAAGCAG
TCGAGATACGAATTCCTGTCAATGGAAATATTGTTGACTTGAGTCTATTC
TCAAATCATTCTTGTGTAGACGAATGTCGAATGATATTCCAATTAAAAAA
CATTTCTCCTTGGGAAAAGTTTAAAGTTTTTGTCGGCTGAGAACACAAGT
CAATTTGTTTGGAGAAGGTTCCTTGTCAATATTTTGACCTTGGGTGCTTA
GAACTGAAATACGCAGTGAAATCAGTGGATCGAATCATACAAAGAGATAT
TCCTGTAAATTGTTTACAAAAAGATTGCACTTGGACTGGCTCTCTGCAAG
ATTATGAGAGAAAGGCTCAACAAGAGTGCTACTGTTTATCGATGTTCGAT
TTGTCAAACTCCTTATCAAAGAAATAAGATGTCGGTCATTCCAACTGGTT
ATCAAAATGAGATTGCTGGTCCAGATAAAAAGCTTTTCGAATGTCCAATT
TGTTTGTGTATCATTCGTAAAGCAACTGAACTTCCCTGTGAACACTTGAT
GTGTTCTGACTGTTTGCTTCACTATGAAAACGAAGAAATTCAAAGAATCA
AAAGGTTGCACAAAGAAATTTGAAACAACATAATGAAACCTTTGGAGATT
TTCACCAAACTTTAATTTTGGACAATGTTAAACTTTTGATGAAGGAAAGA
GCTCAAGATCGGGAGAGGATTCAACAACTGCAAAGCCAACTGGAAAAAAA
TGACAGACAACTCGGAAATTTATCTAAAGAATTAAAGAACCAAACTGATC
GCCAACTGAATTTACAAAAAAGTTTAGAACAATACAACAAAAGCCTTAAA
TCAATCGAAAAAGAAATCGACGATATGAAAATAATGCTCAAAAATCAAAC
GAAAGAATATTCAGAAAAAGAAAATGATCGTGTATCGAGAGACAAAGAAT
CTTTTATGAAGAAATTAGAAGACCATCGCAACCAAATTAAGAAACAATCT
AATAAATCACAGCAATTAGAAAAAGAAAATGCAAATTTGAGAGAGAAGTT
GACAAGTCAAGGTAAAAGGATCCAGCAGCTCGAAGAGAAGTCTCTTAACC
AAGGTAAGAAAGATCTCCATAAAAGCTTGGACGTTCATTCTAAAGATATT
TCGGAATTGAAGACTTTTGCAGAGCAGATGAGCTCTTTCCTCCATCGATT
ATCGTCATGGGAATTCATGAAAGAAAAATTCTATAGATTCTTTCGCGAAA
ACGATTACGAAGATGATATAGGTTTGAAAGAATGGCGAAATTTCTCGGAT
AAAGTTCTCTCTAATGAAGAGAATGTGGATTGTGTTTATTTGAAAGAAAT
GAAGGATGCCATCAAAGGGTACAGCCATCACCTCTACCCTGGCTGGTACA
CTCGGTTGAACCTTTTGGCAAATAAACTGGACACTGGTGTTATTGATCGC
CATTATCATCTCAAACTCTACGCACCGTGCCATTTCGATTTCATATCTGT
TAAAGCGTTCAGTGATGTCATCGGTTTTGAGAAGGAAATCAACAGTTATC
ATAAATGGTGCAGATATTCAATTGATGTGGCAAGTTATCACGACTCTGAA
GCAAATTGCTTTCACGTTGCTTTAGTTTGTGTTGGTGTGAATAATATTAG
AATGTTTAATTGGTTTGATGAAGCAGTCGAGATACGAATTCCTGTCAATG
GAAATATTGTTGACTTGAGTCTATTCTCAAATCATTCTTGTGTAGACGAA
TGTCGAATGATATTCCAATTAAAAAACATTTCTCCTTGGGAAAAGTTTAA
AGTTTTTGTCGGCTGAGAACACAAGTCAATTTGTTTGGAGAAGGTTCCTT
GTCAATATTTTGACCTTGGGTGCTTAGAACTGAAATACGCAGTGAAATCA
GTGGATCGAATCATACAAAGAGATATTCCTGTAAATTGTTTACAAAAAGA
TTGCACTTGGACTGGCTCTCTGCAAGATTATGAGAGAAAGGCTCAACAAG
AGTGCTACTGTTTATCGATGTTCGATTTGTCAAACTCCTTATCAAAGAAA
TAAGATGTCGGTCATTCCAACTGGTTATCAAAATGAGATTGCTGGTCCAG
ATAAAAAGCTTTTCGAATGTCCAATTTGTTTGTGTATCATTCGTAAAGCA
ACTGAACTTCCCTGTGAACACTTGATGTGTTCTGACTGTTTGCTTCACTA
TGAAAACGAAGAAATTCAAAGAATCAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009098XLOC_009098Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016308-exon-sc0000232-1575043694:234405..235500TCONS_00016308-exon-sc0000232-1575043694:234405..235500Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1575043694:233579..233648TCONS_00016308-exon-sc0000232-1575043694:233579..233648Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1575043694:232701..232802TCONS_00016308-exon-sc0000232-1575043694:232701..232802Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1575043694:231503..231568TCONS_00016308-exon-sc0000232-1575043694:231503..231568Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1575043694:229782..231375TCONS_00016308-exon-sc0000232-1575043694:229782..231375Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1510915933:234405..235500TCONS_00016308-exon-sc0000232-1510915933:234405..235500Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1510915933:233579..233648TCONS_00016308-exon-sc0000232-1510915933:233579..233648Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1510915933:232701..232802TCONS_00016308-exon-sc0000232-1510915933:232701..232802Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1510915933:231503..231568TCONS_00016308-exon-sc0000232-1510915933:231503..231568Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1510915933:229782..231375TCONS_00016308-exon-sc0000232-1510915933:229782..231375Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1491911889:234405..235500TCONS_00016308-exon-sc0000232-1491911889:234405..235500Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1491911889:233579..233648TCONS_00016308-exon-sc0000232-1491911889:233579..233648Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1491911889:232701..232802TCONS_00016308-exon-sc0000232-1491911889:232701..232802Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1491911889:231503..231568TCONS_00016308-exon-sc0000232-1491911889:231503..231568Clytia hemisphaericaexon
TCONS_00016308-exon-sc0000232-1491911889:229782..231375TCONS_00016308-exon-sc0000232-1491911889:229782..231375Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00016308-proteinTCONS_00016308-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000232supercontigsc0000232:229782..235500 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.03631 5.15073 1.52594 0.593475 0.721872 1.14555 0.834326 1.72007 1.73954 1.00301 1.84608 2.04529 1.68404 1.73085 2.16984 1.36429 2.71243 3.3769 1.25532 0 1.05591 0.901189 9.01192 6.46777 2.56301 1.99572 1.39158 0 4.01112 4.57788
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016308 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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