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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00016306 ID=TCONS_00016306|Name=TCONS_00016306|organism=Clytia hemisphaerica|type=transcript|length=801bp
ATCATTCATGACTTCCACCATCAACTTTTACCATACCCCTATCCCGACTC
TTTGTCATCGGTCGAGTCAAGATATCTTCTTCTTCAGGCATCACGAAACA
ACGATTAAATAACTGGTTTAGTTTGCGTCATTGCAACGATTCTATTGATC
CTTTACACCTTCCGCAAGTTATCGGACAACGAGACACAAGTAACAGATCA
GATAACAGATGCTTTCAAAGGTACAAAATTTGCATCGTCACCGAAGAGGT
CCACCGCAAAAAGTTTTCCATAAAAGGAAAACAACGCCTGGATCAACAAA
ATTGGATTACAGTCAGAGATCGCTAAAACCGGTCCTCTTGAAGCTTAAAC
TTGCTTTACGACAATGTACAAATACAAACTGAGCTTCATTATGAGAACTA
TCTCCAACATTCGACACCAAGCTGATCCCAGCTATAATAAATAAAGTAAG
TAAGTCCCGAAGTAAGTATATTAACTGTTAGAAGTCGGcagagccgggag
tgagggagtctatccccttttctatctATTTGCGCCGAACCTTGGAGGTC
GAATACTGAGATGGAGCACCACACCAACTCTTAACTTCCAGTAACTCAAG
AAAATGCCACCAAGCCACAAACATAGCTATTGCAAGCTTTGGCGGTTTTG
GCATTCCAAAATTCAGTGAACTTTCAAATTCAGAATTTGCAGTTCAGAAA
CGCTGACACAGCAGCTCCGTAAGAGCATAATGGAACAAAATGCCAATCGA
AATCAAATGCGAGCCAAGGTCGTCCATTTTGCTATCAACTTTCCCCATTC
G Run BLAST on NCBI transcript from alignment at sc0000232:138563..139628- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00016306 ID=TCONS_00016306|Name=TCONS_00016306|organism=Clytia hemisphaerica|type=transcript|length=1066bp|location=Sequence derived from alignment at sc0000232:138563..139628- (Clytia hemisphaerica)
ATCATTCATGACTTCCACCATCAACTTTTACCATACCCCTATCCCGACTC
TTTGTCATCGGTCGAGTCAAGATATCTTCTTCTTCAGGCATCACGAAACA
ACGATTAAATAACTGGTTTAGTTTGCGTCATTGCAACGATTCTATTGATC
CTTTACACCTTCCGCAAGTTATCGGACAACGAGACACAAGTAACAGGTTA
CGCCAAGTCGTTATGTAATGTGGTACGATTTGTAGATACCATACCTTTTT
TGGACTCACTTTAATGGGATTAAATTTCGCGTTCATTTAATTTTGCGAAT
ATGCCTGAAAACAGCTGAAAATAGCCATTTTTTGCCACAAGTTTCTCCTC
CGAAAATGCGGTTTTAAAAATTTTGTGCTGGATTTAATCCGATTAAAGTA
GCTATTTTCAGCGCGCAGACAAAACCTGACTTATCATCAGACTTCAATTA
ACCTTTAACAGATCAGATAACAGATGCTTTCAAAGGTACAAAATTTGCAT
CGTCACCGAAGAGGTCCACCGCAAAAAGTTTTCCATAAAAGGAAAACAAC
GCCTGGATCAACAAAATTGGATTACAGTCAGAGATCGCTAAAACCGGTCC
TCTTGAAGCTTAAACTTGCTTTACGACAATGTACAAATACAAACTGAGCT
TCATTATGAGAACTATCTCCAACATTCGACACCAAGCTGATCCCAGCTAT
AATAAATAAAGTAAGTAAGTCCCGAAGTAAGTATATTAACTGTTAGAAGT
CGGCAGAGCCGGGAGTGAGGGAGTCTATCCCCTTTTCTATCTATTTGCGC
CGAACCTTGGAGGTCGAATACTGAGATGGAGCACCACACCAACTCTTAAC
TTCCAGTAACTCAAGAAAATGCCACCAAGCCACAAACATAGCTATTGCAA
GCTTTGGCGGTTTTGGCATTCCAAAATTCAGTGAACTTTCAAATTCAGAA
TTTGCAGTTCAGAAACGCTGACACAGCAGCTCCGTAAGAGCATAATGGAA
CAAAATGCCAATCGAAATCAAATGCGAGCCAAGGTCGTCCATTTTGCTAT
CAACTTTCCCCATTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00016306-exon-sc0000232-1575043694:139433..139628 | TCONS_00016306-exon-sc0000232-1575043694:139433..139628 | Clytia hemisphaerica | exon |
| TCONS_00016306-exon-sc0000232-1575043694:138563..139167 | TCONS_00016306-exon-sc0000232-1575043694:138563..139167 | Clytia hemisphaerica | exon |
| TCONS_00016306-exon-sc0000232-1510915933:139433..139628 | TCONS_00016306-exon-sc0000232-1510915933:139433..139628 | Clytia hemisphaerica | exon |
| TCONS_00016306-exon-sc0000232-1510915933:138563..139167 | TCONS_00016306-exon-sc0000232-1510915933:138563..139167 | Clytia hemisphaerica | exon |
| TCONS_00016306-exon-sc0000232-1491911889:139433..139628 | TCONS_00016306-exon-sc0000232-1491911889:139433..139628 | Clytia hemisphaerica | exon |
| TCONS_00016306-exon-sc0000232-1491911889:138563..139167 | TCONS_00016306-exon-sc0000232-1491911889:138563..139167 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000232 | supercontig | sc0000232:138563..139628 - |
Blast
The following BLAST results are available for this feature:
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