TCONS_00016059 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00016059
Unique Name	TCONS_00016059
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	820

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000225:243185..249835-
coding sequence from alignment at sc0000225:243185..249835-

transcript sequence

>TCONS_00016059 ID=TCONS_00016059|Name=TCONS_00016059|organism=Clytia hemisphaerica|type=transcript|length=820bp
AGAGAAACGAGCAGAACAAATATGGTGTCAATTTCACAATGTGTAAAAAC
ATTCCAAAGGTTGATGAATCGAGAATAGTTATAAATCAAGTCGATCCAAC
ATTGGTCAGAGATGAAAGTGTTTGTGTTGGAGATTATGTTGTGGAAATCA
ATGGTCATTGTACATTGCTAGCAACAATGGACGATGTTCGTTACTATTGT
GGAAACCAGAGTGACCATTTACGCCTGCGCATTAGAAGGCCTAAAGTAGT
GGAACATGAGATAACAGGCAGAGCCGTTGCATTTGTTGACTGGAAACTAG
AAATGGGAATTTTCTTTAAGAATGTCTCGCGGAGAGGCCTTGGAGATGAA
AAAGGATTAATTGATGGCGATGAGATTATAGATGTTGCTAATAGCAGTAA
ACCCATTTCCGAGATAACTATCGACAAAATTCAAAAGAAGATGTCAAGAG
AACAAGGAGTGACAATGAGAATCCGTCGAACAAATGGTCCAAGAGTATTC
AATGCTCCTCGACCAGACGATGATCGGTCGGATACAAGTTCAACAAGAGA
TCAAAgACCATCACACCATGCACTAAACCATGGACGTTCTTCGGTAACAG
CTTTCCCAAGGGTTGAAGAACACCCACCAACCATGATGTCAAGACCTGGT
ATACCAAGAGAAAACACTATTCACATCAGTGTAGTCAAGCGACACTATGA
ATTCTTCGGCTGGTCATTTATTGGTGGAAATAAAGTtggaatttttgttc
aaaatgttGAGAATCATTTAGCTGCATACAACTCCAAGATTCAAGTTGGC
TGGAAATTACTGGAGGTAAt

Run BLAST on NCBI

protein sequence of TCONS_00016059-protein

>TCONS_00016059-protein ID=TCONS_00016059-protein|Name=TCONS_00016059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
RNEQNKYGVNFTMCKNIPKVDESRIVINQVDPTLVRDESVCVGDYVVEIN
GHCTLLATMDDVRYYCGNQSDHLRLRIRRPKVVEHEITGRAVAFVDWKLE
MGIFFKNVSRRGLGDEKGLIDGDEIIDVANSSKPISEITIDKIQKKMSRE
QGVTMRIRRTNGPRVFNAPRPDDDRSDTSSTRDQRPSHHALNHGRSSVTA
FPRVEEHPPTMMSRPGIPRENTIHISVVKRHYEFFGWSFIGGNKVGIFVQ
NVENHLAAYNSKIQVGWKLLEV

Run BLAST on NCBI

transcript from alignment at sc0000225:243185..249835-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00016059 ID=TCONS_00016059|Name=TCONS_00016059|organism=Clytia hemisphaerica|type=transcript|length=6651bp|location=Sequence derived from alignment at sc0000225:243185..249835- (Clytia hemisphaerica)
AGAGAAACGAGCAGAACAAATATGGTGTCAATTTCACAATGTGTAAAAAC
ATTCCAAAGGTTGATGAATCGAGAATAGTTATAAATCAAGTCGATCCAAC
ATTGGTCAGAGATGAAAGTGTTTGGTAAGTCTACACGTTTTTATCATCCG
AAAATATTCTTACGGTATTCTTGTTACGTTAGATTAGAACCAAAATTTAA
GTTAGCGTACACGTTTTTTTATAAAAACATCCAAAATTTTTGAAGCCTTT
GAATTTTCTTAATAAAACTTTTTGAGTTAGCCTCCAAAATCTTTTTAACA
AGTTCTTATTTTCACATTTTTGTTCATTTCCCTAAGAAAATGTTTTTGTT
GTTTTAGAGTCTGCAAAGCCTTAAAATGTTCTTTAACTTGTTCTTAACAT
TTCGGTCATCAAAGCCTTCAATGTTCTTATAGTTTGTTCTTAGAAACATG
AAGGTAAACTTTGTTGTACAAAGTGCTTTATACCAGGAAAACAATTAGTG
CTGATTTAGAATCAGAATTAGTTTGTTCTTATAAAGAACGTTTATTTAAA
TTTCTTCTTCCTATTTCATCCACAGTGTTGGAGATTATGTTGTGGAAATC
AATGGTCATTGTACATTGCTAGCAACAATGGACGATGTTCGTTACTATTG
TGGAAACCAGAGTGACCATTTACGCCTGCGCATTAGAAGGCCTAAAGTAG
TGGAACATGAGATAACAGGCAGAGCCGTTGCATTTGTTGACTGGAAACTA
GAAATGGGAATTTTCTTTAAGAATGTCTCGCGGAGAGGCCTTGGAGATGA
AAAAGGATTAATTGATGGCGATGAGATTATAGATGTGAGTATCTATTGTT
TGTTACTGTTATTCCCCGGGAGGGAATTTGCTCAATTTTTTTAAATTTTC
TCTGCACTGTAAGCGTCCAATTTCAAAAGCCTAATTTCGGGCTGCACGTA
CGGTCGTTTCTGAATCGAGTAGTGCCCCCCAGGTGTTATCCATTCAACCT
ACAGATATCTACCCAGCTGGCACACAAAGTTGTTTCAACGTTTATTTAAC
GTTCACAGCATCCATATTACGTAAGATAAACGTTGAAACGACGTTTTATG
CCAGCTGGGTAGAAAGGTCGATTAATCTTCAAGATTTTTAGTGGAAGTGC
GTCTCGGGGAGAGGGGACAGTGGGTTTACCGACTGACGGTATGTGCGGCG
AGAAATTTGGCTTTTAGAATCGCACCCTTCAAGCACAACAAATTATAGTG
CATTTTTCTCAAATTTTCCGTACCCTTAACCACCACACATACCCGTTGGT
GAATTTTCCAGACTGCTCCCCCGGGAATTGTGTCCAGTTTTGAATTCGAA
TGGTCCGCCATGTTGTCCTCTAATTTACCTTAGAATTTCGAGCGTTTGAA
TTTCAAAATATTCGAATCGCACTTTTGACCACCAAAATTACAACCCTGTG
CCACAGACCCATTGGGATCCCAGATTCAATCAACCCGTTATTATGAAAGC
TGAACGGATTCACATAAGAAGGTTTGAAGAAGATTCCTCTCCTGAGTCCT
AAATGCTTTCCCTTCTACGCAGACGATCCTATCGTCTACACATTATCACT
GAAAAAGGAAAGAATTCAGGAAACGAGATAAATTTGAAAACGAGTTTAGT
TCGGGGCGGAGTAAACAGTGGCAGAGGTGTTTACAGTGTTCCAAAACTCT
ACCGCCACTTTTTTCCCATAAACCGCCCTGACGCCCTAGCTCTCTCCCGC
GTTTACTGACCTTTAAACGGACGATAGCATCGTCTACCTTCTACGTAAAA
CATCAATGAAATGAAAATAAATGATCTATCTTTCTAGGTTGCTAATAGCA
GTAAACCCATTTCCGAGATAACTATCGACAAAATTCAAAAGAAGATGTCA
AGAGAACAAGGAGTGACAATGAGAATCCGTCGAACAAATGGTCCAAGAGT
ATTCAATGCTCCTCGACCAGACGATGATCGGTCGGATACAAGTTCAACAA
GAGATCAAAGGTAAGGGAGTGGTCAGAAAGTAGTAGATACGGGGGATTCT
AAAAATAATTCGCGCCCCCTCTTGATGTCCTCTTAACCAGCCCTTATATT
TTTGGCACCCTCCCTCCTAATATAGGCATGTCCATGAAGATCGTGGGTGA
GAAAAACTTTTGGCACACTCCTAGAATCATCCAACCCCCTCCCCCCCCCC
CCCAAAAAAGGCCTGTCCATGAAGATCGGGGGGGAGAAAAACTTTGGCCC
CCCCCAAAAATCCCCCCCCCCCCCCCCCTTAGTAAATGCTTTCTGACCAC
TCCCTAGGGACTTATTTTAGTTGCAATATGTGTTTCGTCATTGCAGTATC
AAAAACGCTCAACAATGAAAACCAAGGTTTTTCCTCTGACAGTAGTGTGA
CATAGTAGATGGCAGATTACTTTGCTTTACCTACCTTTGCTTACGAACTA
CAGAGTAGTTCTATTTAGTGTTAGAGTAGCTCTATCTAGTGTCTTTTACA
AGATGTCTGTGATTTGTATTCATTCTAATGTGTGGGAAATACAACCTTTT
TGCCCGTAGCCGCCAATTGCCGCGCGGGCATTTTTTGTCCGTTTTACCAA
CCTAAAACCATCCCAGTCTTTTTTCTATTGTCTTTAGGTGCGAAAAAAAA
GACTGGGACGGTTTTATTTTTTATATAAAAAAATGCCCGTGTGGCAATTG
TCGGCTACGGTTGAAAAGGGGAATCGCCGAATATTGTTTTACCACTTGAA
TCAATTTTTATAATAATAGACCATCACACCATGCACTAAACCATGGACGT
TCTTCGGTAACAGCTTTCCCAAGGGTTGAAGAACACCCACCAACCATGAT
GTCAAGACCTGGTATACCAAGAGAGTAAGAAGCAACATGTTTTTTTCATA
AGAACATCCAATATTTTTGAAGCATTCGGATGTTCTTAATTTTTTTGAAT
TTTAAGCCTGAGATAATGTTCTCAACATTTTCTTATTTTTACCATTTTGT
GAGTATGTTTTTCTTTTTTTCTTAATAAATTGGGTATTTGAGAGTCCGCA
AAGCCATAAGGTGTTCTTAACTTGTTCTTAATATTCTGGCCATCAGAGGA
GCCTTATGTTCATTTATAGTTTTGTCGTATAAAAAAAGTGCGTACGTTTA
CAGTAAAAAAATTCTCAGACTTTAAATTTGGTAGGAAACACTAACGGCCA
CTAACATCTACATGCTTTTGTGCCTCCTTCTTCTCCGATATCAATAAAAA
TTCAAAAATTAAGTTTTTGCAAAAGAAAATGCCAAAGTTTTTGGCTATTC
TTTATAATATGGTTCCTGAATCTGCATAACTTGCAAGTTCTCATTCCTGC
GAAAATTTACCGAAAGCTAAAGAAACCTACCGGGTGTGCCACAAATAAAT
TACCATCTTTGGTTTGATATTGTGTAGTTCAAAGGCTATGTTCTAAAACC
TAAAATATCACTTTTAAAAATGACAGAAAAAGGCGAAAAACGAGAGTATT
GAATTGAAACGATTTTATGCATCAGGAAATTTCCATTTCATTTTATTCCT
GTTTAAAATTGACTTTTGGAATCATCAGTTCTTTCATCCATCATCATTTG
TCTTTAAAGTTTGCCTGTAACGTCAGACTTAGTCAAAAATTTTACCAGGC
TTTGCCAGGCAACTTCAATTTTCGATTAAAAAAACTCAAGTCTTTGAAAC
AAAGTATATACAGTTGACGCTCTCTAATTCGATCTTCGGGGGGAATTGGA
TTTTCATCGAATAAGGGAGCTTATCAAATAAGAGAGCGTCGTTTATGGAG
GCCCCCCAGTCGACCCTCAATTCACGTATTCACGCAAAACTTTTTGCTCA
TTCACGTATTCACGCGCGAAAAAAACCATTTTCACGTTCACGCGCTGATT
TTGCTTTTAATCTTTTGTTAAACGATTGTGACCCTATTGGGCTAAATTTG
ACCTTTTTATGGCAAACATAAAGTTTTCTGCAATTTTTTGACCTTATTCT
CGACAGCGTCGAACTTTTAAGACCTCTTACAATTATTGGAGCTTTCATAG
GGCAATGTTTAATGTCTGTCTATCACGTCTATCACGCCAAAGTTACAAAA
AACTTCCTTTCTGGCGTACGGTGGTATAAACCATGCCTGAATTTGCTTTT
TAAGGGAGGTAAGTGCAAAGTTAAGCCTTAGCTTTAAGGTTTCCCCCCGA
ATTTTCTTCGTCGCAGGCCCTAAATACATTTTATTTTGAGAATAAATTTA
AATCGAGGTTTGGCCCAAATTCATGGTCTGGAAAGTCGCGAGCTTCAAAG
AAGTGGTACAACCTGAGGACGCAAATTCCAAAGTTTGACTGCCTGTCTCA
TGGAAGAAAAGCTGTGGAAAGGAAAAGGCGAGCGAAGCGAGCGCGAAAAT
TTTTTGACAACTTTCACTCTTTCATTGCTGAGAAAACGGCCTTAACACAC
TATTGTTACCCTAATATGCCTTGTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
CAAACAATTCATTCAGAATCTTTGATTATTTTCAACACTGACCATTTACT
GGTACAAATCTGGTACGGCGAGTGACGTACCTGCCTTACACGGTGCGGCG
TCACATAAGTTTTTTTCTTAATGTTCGATGATGCAATCATATAAAAATTT
TTAGAACTATCTACCTACTTTTGTAAATTATCGAAGAATCAAATACCCTT
CACTGTCTCCAAGTTCGTGCGGTATCATTTTGTGTACTGCATTTAGTAAC
AATATAAGCGATTACAGAAAGACGACCATCATTAGCGCCGACGAAGAATA
TTTTCTCATTTAAACTTTTTTGTTTTGGCTCAAAACACTTTCGCTGGATG
CAATATTTGCATCACAAAGTGCGGCCTTAGAAAAATAAGGAAAAAATATT
TGTTTCTGTTTCAATTTTTGATTATTTTGAATAACTTTACAATGGCAATA
GGTCAATATGATATCAAGGATTATGCGAGCGAAGCGAGCAAGAAAATTTT
ACATATTTAGGTTTATTCAGTTTTGTTTTAGACAAAAATTTGCTTTTCAC
GTTCACGCTCAAAATCTCGATTCACGAATTCACGCTGGTAAAATCTTGTT
TTCACGTTCAGGCGGATATCTCAATTCACGTATTCACGCGTTGAAAAAGT
CCAATTCACGTATTCACGACAGAAAAAAGGGTCATTCACGCGTCACACCA
GCCCCTGGAGGAGCCCCTTTATGAGAGTTTCTTGTTGACGGGAACTTTAA
ATTTCATCGAATAAGGGAGCCTATCGAATAGTAGAATTAGAGAGCATCAA
CTGTATTAACTATTATTTATTTATAAATTTTATCTTTACACTATATCTAT
TATTTAATTTAACTAATACGCTCATTCTTTATTGTTGTAACCAAAATCAT
TTATCTTCAAACATATAGTAGGTCCACATACTAAACTTTTAACAGCATTT
TTTGTATAAGACATTTCCAAAAAAAATCGTAGATAAGACCTTTCAAAACT
TCTATTAGGATTTGAATCCGCGAAAGTTTATCCCATCAAAGTACCCATTC
TCGTAAAAACTCTATTTTTCTGCCTCGCGTAAACTACTCCCCCAGGGCAA
CCTAGGCAAGTAAAGGGTCGAGTATGTGCCACCCTGAAGGGTGCCTATTT
AAAACCTGGCAGTCCCTTTAGGGGACTAGGAAAAATCAGTAAAGTTAAGT
CTCAATCCCATTAAGGGTCGGAAAAATATGATATTTAAATTTTTGCTTTT
AGTCAAAGAAAGTCCACACCTAAAGCGATAAGTAAAGTACTTATACTCAT
AGGTTTTGCCTTTCATATTTTGTTAAGTTACGTAACTTCCACCATCATGG
AATCAAATGTTTCAGTCACACGGATTGACCCTACCCAGCTAGCACACGAC
GTTGTTTCAACGTTTATCTAATGTTCACAACGTCCATATAACGTTCAATG
AACGTTGAAACAATGTTGTGTGCCAGCTGGGTAGATAAAGTATATAAGTA
TTATTATCCGACGCGCGTAAATGGCGACATTTGATTGGCTTATTTGCTGT
CCAATATTTTAGCATGGAGGCTACATATTTCAAAAATTGACGTCACACAA
CAAGTTCAATGACAATTGATCATCTTCTTTTTGACGTTACGTCACAAAAT
AAAAATAAGACTTTTGAATGAAAAACTACTAAGAAACCAGATTTACGAGC
ATATAAATTGGAATTATGTTTGAAAACGAGAAATATTTTAGCGATGAACG
GATAATAAACCATTTATTTGGACGCAGTCTCATCCAATATGAAAAATATT
GGGCTATGAGAAACTTTCTCGCACGCCCAATATTTTTGCATATTGGATTC
GACTTTGTCCAGTACATAACTGCTAAACATTTCCTCTTTTAGAAACACTA
TTCACATCAGTGTAGTCAAGCGACACTATGAATTCTTCGGCTGGTCATTT
ATTGGTGGAAATAAAGTTGGAATTTTTGTTCAAAATGTTGAGAATCATTT
AGCTGCATACAACTCCAAGATTCAAGTTGGCTGGAAATTACTGGAGGTAA
T

Coding sequence (CDS) from alignment at sc0000225:243185..249835-

>TCONS_00016059 ID=TCONS_00016059|Name=TCONS_00016059|organism=Clytia hemisphaerica|type=CDS|length=4080bp|location=Sequence derived from alignment at sc0000225:243185..249835- (Clytia hemisphaerica)
AAACACTATTCACATCAGTGTAGTCAAGCGACACTATGAATTCTTCGGCT
GGTCATTTATTGGTGGAAATAAAGTTGGAATTTTTGTTCAAAATGTTGAG
AATCATTTAGCTGCATACAACTCCAAGATTCAAGTTGGCTGGAAATTACT
GGAGGTAACCATCACACCATGCACTAAACCATGGACGTTCTTCGGTAACA
GCTTTCCCAAGGGTTGAAGAACACCCACCAACCATGATGTCAAGACCTGG
TATACCAAGAGAGTTGCTAATAGCAGTAAACCCATTTCCGAGATAACTAT
CGACAAAATTCAAAAGAAGATGTCAAGAGAACAAGGAGTGACAATGAGAA
TCCGTCGAACAAATGGTCCAAGAGTATTCAATGCTCCTCGACCAGACGAT
GATCGGTCGGATACAAGTTCAACAAGAGATCAAAGTGTTGGAGATTATGT
TGTGGAAATCAATGGTCATTGTACATTGCTAGCAACAATGGACGATGTTC
GTTACTATTGTGGAAACCAGAGTGACCATTTACGCCTGCGCATTAGAAGG
CCTAAAGTAGTGGAACATGAGATAACAGGCAGAGCCGTTGCATTTGTTGA
CTGGAAACTAGAAATGGGAATTTTCTTTAAGAATGTCTCGCGGAGAGGCC
TTGGAGATGAAAAAGGATTAATTGATGGCGATGAGATTATAGATAGAAAC
GAGCAGAACAAATATGGTGTCAATTTCACAATGTGTAAAAACATTCCAAA
GGTTGATGAATCGAGAATAGTTATAAATCAAGTCGATCCAACATTGGTCA
GAGATGAAAGTGTTTGAAACACTATTCACATCAGTGTAGTCAAGCGACAC
TATGAATTCTTCGGCTGGTCATTTATTGGTGGAAATAAAGTTGGAATTTT
TGTTCAAAATGTTGAGAATCATTTAGCTGCATACAACTCCAAGATTCAAG
TTGGCTGGAAATTACTGGAGGTAACCATCACACCATGCACTAAACCATGG
ACGTTCTTCGGTAACAGCTTTCCCAAGGGTTGAAGAACACCCACCAACCA
TGATGTCAAGACCTGGTATACCAAGAGAGTTGCTAATAGCAGTAAACCCA
TTTCCGAGATAACTATCGACAAAATTCAAAAGAAGATGTCAAGAGAACAA
GGAGTGACAATGAGAATCCGTCGAACAAATGGTCCAAGAGTATTCAATGC
TCCTCGACCAGACGATGATCGGTCGGATACAAGTTCAACAAGAGATCAAA
GTGTTGGAGATTATGTTGTGGAAATCAATGGTCATTGTACATTGCTAGCA
ACAATGGACGATGTTCGTTACTATTGTGGAAACCAGAGTGACCATTTACG
CCTGCGCATTAGAAGGCCTAAAGTAGTGGAACATGAGATAACAGGCAGAG
CCGTTGCATTTGTTGACTGGAAACTAGAAATGGGAATTTTCTTTAAGAAT
GTCTCGCGGAGAGGCCTTGGAGATGAAAAAGGATTAATTGATGGCGATGA
GATTATAGATAGAAACGAGCAGAACAAATATGGTGTCAATTTCACAATGT
GTAAAAACATTCCAAAGGTTGATGAATCGAGAATAGTTATAAATCAAGTC
GATCCAACATTGGTCAGAGATGAAAGTGTTTGAAACACTATTCACATCAG
TGTAGTCAAGCGACACTATGAATTCTTCGGCTGGTCATTTATTGGTGGAA
ATAAAGTTGGAATTTTTGTTCAAAATGTTGAGAATCATTTAGCTGCATAC
AACTCCAAGATTCAAGTTGGCTGGAAATTACTGGAGGTAACCATCACACC
ATGCACTAAACCATGGACGTTCTTCGGTAACAGCTTTCCCAAGGGTTGAA
GAACACCCACCAACCATGATGTCAAGACCTGGTATACCAAGAGAGTTGCT
AATAGCAGTAAACCCATTTCCGAGATAACTATCGACAAAATTCAAAAGAA
GATGTCAAGAGAACAAGGAGTGACAATGAGAATCCGTCGAACAAATGGTC
CAAGAGTATTCAATGCTCCTCGACCAGACGATGATCGGTCGGATACAAGT
TCAACAAGAGATCAAAGTGTTGGAGATTATGTTGTGGAAATCAATGGTCA
TTGTACATTGCTAGCAACAATGGACGATGTTCGTTACTATTGTGGAAACC
AGAGTGACCATTTACGCCTGCGCATTAGAAGGCCTAAAGTAGTGGAACAT
GAGATAACAGGCAGAGCCGTTGCATTTGTTGACTGGAAACTAGAAATGGG
AATTTTCTTTAAGAATGTCTCGCGGAGAGGCCTTGGAGATGAAAAAGGAT
TAATTGATGGCGATGAGATTATAGATAGAAACGAGCAGAACAAATATGGT
GTCAATTTCACAATGTGTAAAAACATTCCAAAGGTTGATGAATCGAGAAT
AGTTATAAATCAAGTCGATCCAACATTGGTCAGAGATGAAAGTGTTTGAA
ACACTATTCACATCAGTGTAGTCAAGCGACACTATGAATTCTTCGGCTGG
TCATTTATTGGTGGAAATAAAGTTGGAATTTTTGTTCAAAATGTTGAGAA
TCATTTAGCTGCATACAACTCCAAGATTCAAGTTGGCTGGAAATTACTGG
AGGTAACCATCACACCATGCACTAAACCATGGACGTTCTTCGGTAACAGC
TTTCCCAAGGGTTGAAGAACACCCACCAACCATGATGTCAAGACCTGGTA
TACCAAGAGAGTTGCTAATAGCAGTAAACCCATTTCCGAGATAACTATCG
ACAAAATTCAAAAGAAGATGTCAAGAGAACAAGGAGTGACAATGAGAATC
CGTCGAACAAATGGTCCAAGAGTATTCAATGCTCCTCGACCAGACGATGA
TCGGTCGGATACAAGTTCAACAAGAGATCAAAGTGTTGGAGATTATGTTG
TGGAAATCAATGGTCATTGTACATTGCTAGCAACAATGGACGATGTTCGT
TACTATTGTGGAAACCAGAGTGACCATTTACGCCTGCGCATTAGAAGGCC
TAAAGTAGTGGAACATGAGATAACAGGCAGAGCCGTTGCATTTGTTGACT
GGAAACTAGAAATGGGAATTTTCTTTAAGAATGTCTCGCGGAGAGGCCTT
GGAGATGAAAAAGGATTAATTGATGGCGATGAGATTATAGATAGAAACGA
GCAGAACAAATATGGTGTCAATTTCACAATGTGTAAAAACATTCCAAAGG
TTGATGAATCGAGAATAGTTATAAATCAAGTCGATCCAACATTGGTCAGA
GATGAAAGTGTTTGAAACACTATTCACATCAGTGTAGTCAAGCGACACTA
TGAATTCTTCGGCTGGTCATTTATTGGTGGAAATAAAGTTGGAATTTTTG
TTCAAAATGTTGAGAATCATTTAGCTGCATACAACTCCAAGATTCAAGTT
GGCTGGAAATTACTGGAGGTAACCATCACACCATGCACTAAACCATGGAC
GTTCTTCGGTAACAGCTTTCCCAAGGGTTGAAGAACACCCACCAACCATG
ATGTCAAGACCTGGTATACCAAGAGAGTTGCTAATAGCAGTAAACCCATT
TCCGAGATAACTATCGACAAAATTCAAAAGAAGATGTCAAGAGAACAAGG
AGTGACAATGAGAATCCGTCGAACAAATGGTCCAAGAGTATTCAATGCTC
CTCGACCAGACGATGATCGGTCGGATACAAGTTCAACAAGAGATCAAAGT
GTTGGAGATTATGTTGTGGAAATCAATGGTCATTGTACATTGCTAGCAAC
AATGGACGATGTTCGTTACTATTGTGGAAACCAGAGTGACCATTTACGCC
TGCGCATTAGAAGGCCTAAAGTAGTGGAACATGAGATAACAGGCAGAGCC
GTTGCATTTGTTGACTGGAAACTAGAAATGGGAATTTTCTTTAAGAATGT
CTCGCGGAGAGGCCTTGGAGATGAAAAAGGATTAATTGATGGCGATGAGA
TTATAGATAGAAACGAGCAGAACAAATATGGTGTCAATTTCACAATGTGT
AAAAACATTCCAAAGGTTGATGAATCGAGAATAGTTATAAATCAAGTCGA
TCCAACATTGGTCAGAGATGAAAGTGTTTG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_008973	XLOC_008973	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00016059-protein	TCONS_00016059-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000225	supercontig	sc0000225:243185..249835 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.95491	7.98378	10.3876	8.36166	2.58403	2.72258	20.2306	20.2675	13.9451	17.0915	9.17712	12.336	39.9302	37.7783	11.8697	12.2426	12.0742	18.988	36.4791	37.5269	40.6458	37.6248	20.3058	27.0558	31.2956	24.7036	10.5097	11.5561	1.4823	1.83854

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001478	PDZ

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00016059 vs. Swiss-Prot (Human)

BLAST of TCONS_00016059 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00016059 (transcript) - C. hemisphaerica