TCONS_00016059-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016059-protein
Unique NameTCONS_00016059-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length272

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016059-protein ID=TCONS_00016059-protein|Name=TCONS_00016059-protein|organism=Clytia hemisphaerica|type=polypeptide|length=272bp
RNEQNKYGVNFTMCKNIPKVDESRIVINQVDPTLVRDESVCVGDYVVEIN
GHCTLLATMDDVRYYCGNQSDHLRLRIRRPKVVEHEITGRAVAFVDWKLE
MGIFFKNVSRRGLGDEKGLIDGDEIIDVANSSKPISEITIDKIQKKMSRE
QGVTMRIRRTNGPRVFNAPRPDDDRSDTSSTRDQRPSHHALNHGRSSVTA
FPRVEEHPPTMMSRPGIPRENTIHISVVKRHYEFFGWSFIGGNKVGIFVQ
NVENHLAAYNSKIQVGWKLLEV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_008973XLOC_008973Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016059TCONS_00016059Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 88..161
e-value: 0.88
score: 13.2
coord: 5..81
e-value: 0.24
score: 18.6
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 97..178
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 4..80
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 215..272
NoneNo IPR availableGENE3D2.30.42.10coord: 1..80
e-value: 1.3E-5
score: 24.8
NoneNo IPR availableGENE3D2.30.42.10coord: 210..272
e-value: 1.3E-4
score: 21.3
NoneNo IPR availableGENE3D2.30.42.10coord: 95..199
e-value: 1.1E-4
score: 21.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..217

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016059-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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