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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015870 ID=TCONS_00015870|Name=TCONS_00015870|organism=Clytia hemisphaerica|type=transcript|length=2534bp NAACCAAGGTCTTCATACTCAATCATCAAATCCATTACTTATGAACAGTT CATATAAttttcaacaacaacagcaagGACAAGGCAAgaataagaagaaa aagaaaaatcaagcaAGATTTCAACCCTATGAAAGACAACTTGTCAATCA GACTGTAGGCATCCAATCACTTGTACAAAGCTCTCCTGTCTTCATCAATC ACAGCAGCAACAACAAAAGTCAAGAAGTTCTAGATTTGTTGAAGCAGTTC CCACGATCCTTATCAACCAAGGAAATTGAGAAGAATTTTTATCGTGTGTC AAAACAGCAACTGCAAACAACACTGGATCAACTCTGTGCTGGAGGTTTAG TGTTGAAACAACCTGGTTTTGGCCTCGAAGCATGGAAAATCAATCCGAAC TCTCCGACAGGTACACCGTCATCACTGCCAACGCAGCCAACACTTGCATC GAATCCACTTCTCCAGAAGACGTTCAATCCAGCGCAATCTCCTCCTATTG CTCAAAATACACCTTTAACCAAAAAACAACGGAAGCAACTCAACAAAATG AACGcacaatcaacaccaaatttgaCTGTCACTCTTGACAACAGCTTTGG AGGTTCTCGATCCATATCCACGCCACCTTTAACCaaaaaacaacgaaaac aaCTGAACAAACATCAATCACAATCTGCTTCAAACATGATGTCTTCGCCA GTAATAACAGCAAATGCAAGCTTTGGATCTCCATACAACACTCCTCTAAC GAAGAAACAGAAAAAACAGCTCAACACGCCCCTTATAACTCCACCGAAAA CTGATTTCATGGTTTCTGCAGATATCTTTAACGCTTTGAACAAGAATCCA GTATCAGCGCTGAACGAGTTATGCCAAAAGAACGGGCGAACTGTTTCATT TGATTTGGTTGCGGAGAATCGGTTCAATCAGAAGAACAAATTTACGGTTG CAGCAAACGTTAGCGGTAGGATGTATGATGCAGTGACAGCCTCAAATATG AAAGATGCACGACGAGAGGCCGCAGATGTCGCATTGAAGGTCATTTTAAA GGACTGCGTTCAGACGCAATCGCAGCAATCTGTTCAAAACGTTCTCTCTC CGAACGCGACACATTTCGATAAGATGGCTGCTTTGAGCCACCGTACCTTC ATCGAAAAATCTAATATGGTTCAAGAGAAATTTGCTGGTCGCAAAGTCAT TGCTTGTATGATTATGAAGCGCGCGGAGAGTGACGAAGGAGTAGTCGTTG CTCTTGGTGCAGGTAATCGATGTATAACGGGACAGCGGCTAAGCATGGAA GGAAAAGTAGTTAACGACTCGCACGCGGAAATCGTTTGTCGCCGTGCGTT CATTTCGTACTTATATAAGGAGCTAGAGAATCATATTGCAGGTAAGCAAT CGATATTTCAAAACGGTGGCTCAAACGGAAAATTCAGTGTCAAAGAAGGT GTTTCGTTTCATTTGTATATCAGTACTGCGCCTTGTGGAGATGGTGCCTT GTTTACACCGAGACAAGATGAGAAAATATCGGATTTCCCTAAAAAACATT CGCCCGTTTTTTCGTCTAAAGTACACGGAATAACCCGATCGAAGATTGAA AATGGGGAAGGGACAATCCCGATTGAGAAAGAAGAAGCAGTACAGACTTT TGATGGAATACTTCGGGGACAGCGTTTACGTACGATGTCTTGTAGTGATA AAATATGCCGTTGGAATGTGGTCGGTGTGCAGGGAGCGTTATTGAGTCAT TTTATGGATCCTGTCTATTTGGGCTCGCTTACACTAGGTTATCTTTATGA TCACGGGCATTTATGTAGAGCTATTTGTTGCAGGTTAGATAAGAACAGCA CTGGAGATTTCGAAGGAAAACTAGCTGAGCCGTTCCGTTTAAACCACCCT TGGATTGGGCGTGTCACCCAATATGAAGCTGGGCGGGAGACGGAGAAAAC GAATAACATTAGTATAAATTGGAGTTTCTATGATACGACACCTGAAGTCA CAGACGGCCGGACCGGTGCTCAAATGAGCCGTACCGGCGGAATTCCAACG CCTTCTCGGCTTTGTAAATATGAAATGTTAAATCGGTTTCGTTCATTGAT CGGGAAGACGAATGAACACAAACATTTGAGGGAAGATCAAAGTTATCGCG AGTTGAAAGACAGTGCGTTAgaatttcaaaacacaaaacaacTCATGATG GAAACGTTACGAACAATGAATTATGGACCGTGGGTTAAGAAACCAAGGGA GCAGGACATGTTCTGATTTTGAATATACATAAGAGCTTTCTTCATGGAAA TCTTTTCATCCGAAAAAtgattactttaatcgtagaaattttagcgagac taattttagcgttctagcgagttttccctattttcgctaaaataaatctc gctaaaacacgccgaatcgacagatcgctaaaatttatccgtgCGAAATG TCTGGTTATattgggttggtgtaatttaagatgcacgatctaacgattta cgattcacgatgcgcgatccatgcataaagtatg Run BLAST on NCBI protein sequence of TCONS_00015870-protein >TCONS_00015870-protein ID=TCONS_00015870-protein|Name=TCONS_00015870-protein|organism=Clytia hemisphaerica|type=polypeptide|length=754bp
NQGLHTQSSNPLLMNSSYNFQQQQQGQGKNKKKKKNQARFQPYERQLVNQ TVGIQSLVQSSPVFINHSSNNKSQEVLDLLKQFPRSLSTKEIEKNFYRVS KQQLQTTLDQLCAGGLVLKQPGFGLEAWKINPNSPTGTPSSLPTQPTLAS NPLLQKTFNPAQSPPIAQNTPLTKKQRKQLNKMNAQSTPNLTVTLDNSFG GSRSISTPPLTKKQRKQLNKHQSQSASNMMSSPVITANASFGSPYNTPLT KKQKKQLNTPLITPPKTDFMVSADIFNALNKNPVSALNELCQKNGRTVSF DLVAENRFNQKNKFTVAANVSGRMYDAVTASNMKDARREAADVALKVILK DCVQTQSQQSVQNVLSPNATHFDKMAALSHRTFIEKSNMVQEKFAGRKVI ACMIMKRAESDEGVVVALGAGNRCITGQRLSMEGKVVNDSHAEIVCRRAF ISYLYKELENHIAGKQSIFQNGGSNGKFSVKEGVSFHLYISTAPCGDGAL FTPRQDEKISDFPKKHSPVFSSKVHGITRSKIENGEGTIPIEKEEAVQTF DGILRGQRLRTMSCSDKICRWNVVGVQGALLSHFMDPVYLGSLTLGYLYD HGHLCRAICCRLDKNSTGDFEGKLAEPFRLNHPWIGRVTQYEAGRETEKT NNISINWSFYDTTPEVTDGRTGAQMSRTGGIPTPSRLCKYEMLNRFRSLI GKTNEHKHLREDQSYRELKDSALEFQNTKQLMMETLRTMNYGPWVKKPRE QDMF Run BLAST on NCBI transcript from alignment at sc0000217:417915..424128- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015870 ID=TCONS_00015870|Name=TCONS_00015870|organism=Clytia hemisphaerica|type=transcript|length=6214bp|location=Sequence derived from alignment at sc0000217:417915..424128- (Clytia hemisphaerica) NAACCAAGGTCTTCATACTCAATCATCAAATCCATTACTTATGAACAGTT
CATATAATTTTCAACAACAACAGCAAGGACAAGGCAAGAATAAGAAGAAA
AAGAAAAATCAAGCAAGATTTCAACCCTATGAAAGACAACTTGTCAATCA
GACTGTAGGCAGTAAGTTCAATTGTTTTTATATTTGCTAACAATCTCCTT
AGAGATATTCTTCTCTGATATAAAGCCTGTCAATGCACGCATTTTTTTGT
AAGAATAGTGTACTTTGGATGAGGGTCAAGTATTCTTAAGAAAGTGCCAA
AATTGAGGGTGAAATATTCTTAACGTATTCTTACTTTTTTAGACTTAAGA
CTTTTTTACAAACATGAGAAATATCAATTTGAGAGTTTTGCACTTTTGAG
TGAACATTTGGGCTAAAATTACATTTCTTCCTCAAAGCTTCAATTTATCT
CTAACAAAGGAAGCAGTTTTTTCTGTTAACCAAATACAAAATGACTGTAT
TCTTATCAAATTCTGTTTCTGAATCACTCGTGTGGAAATAATAATTATAT
AGCACAATTATTGAAGAAGTTGATTTTCTTCTTCTATATTTTTCATCTTC
CTTTTTTGGACCTACCTCCGGGTACCCCGGTGGAGGTCCTTTAAATTAAC
CCATGTCCGTCCGTCCGTCCGTTCGTTCGTCTGTTGCCAGGTTTTCTCAG
GATTGGCTCATTAGTTTTTTTTGATTTTTGGCACACTGATGCAAAATGAT
AATACCTAAAATGTGATGGAGCCCGATTTTGGAAAAAAAATTTTCCGGCT
GAAAATGCCGGAAATATGCCGGAAAAACAGGTTTTTTTGGCATTTTCTCG
AGATTTTATCATCAGTTTTTTTCTGATTTTTTGCTCAAAGATGCGTATTA
ACAATGCCCAAAACATGGCCGAGTCCGATTTTTGAGAAAAATTTTTTTCC
GGCCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAACATGGCCGAGTCCGATTTGTGATAAAA
CATTTTTTCAGGCCGAAAATGCCGGAAATATGCCGAAAAAACTGTTTTTT
TGGGATTTTCTCAAGATTTTATCACTAGTTTTTGCTGATTTTTTGCTCAA
AGATGCGTATTAACATTGCCCAAATCATTGCCGAGTCCGATTTTTGAGAA
AAAGATTTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAATCCCCGTTT
TTGCAGATTTGAATTGGGCTTTTTCCATACATTACTTTTTACTAAACCCC
TCCCCCCATCAACAATCAATGATGACATTTAATGCATTTTCGCTAAGCGC
TATATTTTCTTAATGATTTTTTTTCTCCTTATTGCTATCTAAGTTTCATC
ATCAGGTAGGTCCATTCAGCATGTTGCTTGTTTTTTTTTTTTTTAATAAT
ATCCCACTCCGGATTATCTTTTTAACAAACACAAAACCGTTATCTAATTC
GAATTCGATCAAAAGTTACAGCCATTTTTGTCTCCGCTGCAAATTATATT
GAGACAGACTCTAGAAAGAAAGGAGCACGCAGAAATAACAAAAGAATTTC
TTGAAATTTGTGGTTACGCAAGGGGAGGAAGGAGAAATTTGTTTTTTCTT
TTGTTGAAAAAAATGCTGTGTAAGCTGATGGTAGGGTAGATACGTTGTAT
GATGTCCTTTTTTAAGCAAAAGTAGAGTGAAGTGTTACTTGAGTTTTCAC
TCAATATCTTTCATCATAAATTTTGAATTTGAAGATGAAGAGCTCTTAGA
ATTCTGCGGAAAAAGCTATAATGCCTAACTGTACCTAGTACACTGTTTTA
TTATGGGCTCAGCACGTTTTAAAATATATATTTTCGATTTTAGTCCAATC
ACTTGTACAAAGCTCTCCTGTCTTCATCAATCACAGCAGCAACAACAAAA
GTCAAGAAGTTCTAGATTTGTTGAAGCAGTTCCCACGATCCTTATCAACC
AAGGAAATTGAGAAGAATTTTTATCGTGTGTCAAAACAGCAACTGCAAAC
AACACTGGATCAACTCTGTGCTGGAGGTGAGTAACCATATTGATGAGATG
AATTGAATTAGGCAGGGACTAGGCACTACTTTGCTGAACGAGATTTAATG
TCCTTTGTTTAAAAAAATCAGAAAATTGCACTTGCTTTAATAAGCACAAC
ACTCTCTTCAGCCTAGATATGCTCAAGATTTTGGGAAAACTCTAGGCTAA
ACGTCATGCTATNTTCATCTTCGTTTTTTTTTCTTTTTTAATAGTATTCC
ACTCCGGATTATCTTTTTAACAAACACAAAACCGTTATCTAATTCGAATT
CTATCAAAAGTTACAGCCATTTGTGTCTCCGCTGCAAATGAGACAGACTC
TAGAAAGAAAGGAGCACGCAGAAATAACAAAAGAATTTCTTGAAATTTGT
GGTCACGCAAGGGGAGGAAGGAGAAATTTGTTTTTTCTTTTGTTGAAAAA
ATGCTGTGTAAGCTGATGATACGTTGTATGATGTCATTTTTTAATCAAAA
GTAGAGTGAAATGTTACTTCAGTTTTCACTCAATATCTTTCATCATAAAT
TTTGAATTTGAAGATGAAGAGCTCTTAGAATTCTGCGGAAAAAGCTATAA
TGCCTAACTGTGCCTAGTACACTGTTATATTATGGGCTCAGCACGTTTTA
AAATATATATTTTCGATTTTAGTCCAATCACTTGTACAAAGCTTCCCTGT
CTTCATAAACCACAGCAGCAACAACAAAAGTCAAGAAGTTCTAGATTTGT
TGAAGCAGTTTCCACGATCCTTATCAACCAAGGAAATTGAGAAGAATTTT
TATCGTGTGTCAAAACAGCAACTGCAAACAACACTGGATCAACTCTGTGC
TGGAGGTTAGTGTAACCATATTGATGAGATGTTGAATTAGGCAGGGACTA
GGCACTACTTTGCTGAACGAGATTTAATGTCGTTTGTTGTTAAAAATCAG
AAAATTGCACTTGCTTTAATAAGCACAACACATTCTTCAGCCTAGATATG
CTCAAGATTTTGGGAAAACTCTAGGCTAAAGGTCATGCTAAACCTAAATT
TTGAAATATTTGGCCTCCAAATCACAAAAGAATATGCTGGAGTTTTTACA
AGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAATAAAAGAATCTTAT
TACTTTTTCTAAAGAACGCGTCATCCCTATCACTTCAAATGACCAATTAG
TGAAGTATCTTGTAAAAACTCCAGCTCATCCCAATTCCTCCTATTCCTAA
AGTTTTTTTGCGAAGCATAACAAGGATCTCAAAAATTTGCCCCGTGTTGA
AAAACGTGTATTTGCATCTCAGGGTCATTATTCAACCATTCAATTCAAAA
TTAGATTCCGTCAAGTGAATTAATTAAAAATCGAGCTGAGGCAGTGCAAC
TTAGGAATTCGATCATATTCATTCAGTATAAGACTTCATCCATAAGTCTC
GACCTATCTTTTTAGGTTTAGTGTTGAAACAACCTGGTTTTGGCCTCGAA
GCATGGAAAATCAATCCGAACTCTCCGACAGGTACACCGTCATCACTGCC
AACGCAGCCAACACTTGCATCGAATCCACTTCTCCAGAAGACGTTCAATC
CAGCGCAATCTCCTCCTATTGCTCAAAATACACCTTTAACCAAAAAACAA
CGGAAGCAACTCAACAAAATGAACGCACAATCAACACCAAATTTGACTGT
CACTCTTGACAACAGCTTTGGAGGTTCTCGATCCATATCCACGCCACCTT
TAACCAAAAAACAACGAAAACAACTGAACAAACATCAATCACAATCTGCT
TCAAACATGATGTCTTCGCCAGTAATAACAGCAAATGCAAGCTTTGGATC
TCCATACAACACTCCTCTAACGAAGAAACAGAAAAAACAGCTCAACACGC
CCCTTATAACTCCACCGAAAACTGATTTCATGGTTTCTGCAGATATCTTT
AACGCTTTGAACAAGAATCCAGTATCAGCGCTGAACGAGTTATGCCAAAA
GAACGGGCGAACTGTTTCATTTGATTTGGTTGCGGAGAATCGGTTCAATC
AGAAGAACAAATTTACGGTTGCAGCAAACGTTAGCGGTAGGATGTATGAT
GCAGTGACAGCCTCAAATATGAAAGATGCACGACGAGAGGCCGCAGATGT
CGCATTGAAGGTACATTTATCTCCACTTATTAACATTGTTAATATTATTA
GTTTTATATTACCAGCAGGGAGAGGGGTTTAAGCCACCTTTCTTAACTTT
TGATCTGGATGAGCTTTATGTACCAAATTTGACACAGATGTTCCCTTCGG
TAGTATGAACTCATGAAACTCGGTGTCGTCATCGAAAAGGGGATGAACGG
CAAGATAAATTGGTTCATTTTGCCAAAAAATTAGGGGTTATTTTAGAAAA
TCATGAAAAACGTTGAATTTCATTTCGACAAAGCCTTCTTCAATATTGCT
GTGAACTAATTTTGGCAAAACTGCCCTCTCGCCGTTTGTCGATTTTCGTG
ATTTACTGTGCTATGCCTTTTTAAGAAACGTATGTAACAGTAAAACATTG
ACATATCGAAATAAATTTATTTGGGAAAGAAATTGACACTAAAATTTGCA
TCGACTTATCTATTTTTAGGTCATTTTAAAGGACTGCGTTCAGACGCAAT
CGCAGCAATCTGTTCAAAACGTTCTCTCTCCGAACGCGACACATTTCGAT
AAGATGGCTGCTTTGAGCCACCGTACCTTCATCGAAAAATCTAATATGGT
TCAAGAGAAATTTGCTGGTCGCAAAGTCATTGCTTGTATGATTATGAAGC
GCGCGGAGAGTGACGAAGGAGTAGTCGTTGCTCTTGGTGCAGGTAATCGA
TGTATAACGGGACAGCGGCTAAGCATGGAAGGAAAAGTAGTTAACGACTC
GCACGCGGAAATCGTTTGTCGCCGTGCGTTCATTTCGTACTTATATAAGG
AGCTAGAGAATCATATTGCAGGTAAGCAATCGATATTTCAAAACGGTGGC
TCAAACGGAAAATTCAGTGTCAAAGAAGGTGTTTCGTTTCATTTGTATAT
CAGTACTGCGCCTTGTGGAGATGGTGCCTTGTTTACACCGAGACAAGATG
AGAAAATATCGGATTTCCCTAAAAAACATTCGCCCGTTTTTTCGTCTAAA
GTACACGGAATAACCCGATCGAAGATTGAAAATGGGGAAGGGACAATCCC
GATTGAGAAAGAAGAAGCAGTACAGACTTTTGATGGAATACTTCGGGGAC
AGCGTTTACGTACGATGTCTTGTAGTGATAAAATATGCCGTTGGAATGTG
GTCGGTGTGCAGGGAGCGTTATTGAGTCATTTTATGGATCCTGTCTATTT
GGGCTCGCTTACACTAGGTTATCTTTATGATCACGGGCATTTATGTAGAG
CTATTTGTTGCAGGTTAGATAAGAACAGCACTGGAGATTTCGAAGGAAAA
CTAGCTGAGCCGTTCCGTTTAAACCACCCTTGGATTGGGCGTGTCACCCA
ATATGAAGCTGGGCGGGAGACGGAGAAAACGAATAACATTAGTATAAATT
GGAGTTTCTATGATACGACACCTGAAGTCACAGACGGCCGGACCGGTGCT
CAAATGAGCCGTACCGGCGGAATTCCAACGCCTTCTCGGCTTTGTAAATA
TGAAATGTTAAATCGGTTTCGTTCATTGATCGGGAAGACGAATGAACACA
AACATTTGAGGGAAGATCAAAGTTATCGCGAGTTGAAAGACAGTGCGTTA
GAATTTCAAAACACAAAACAACTCATGATGGAAACGTTACGAACAATGAA
TTATGGACCGTGGGTTAAGAAACCAAGGGAGCAGGACATGTTCTGATTTT
GAATATACATAAGAGCTTTCTTCATGGAAATCTTTTCATCCGAAAAATGA
TTACTTTAATCGTAGAAATTTTAGCGAGACTAATTTTAGCGTTCTAGCGA
GTTTTCCCTATTTTCGCTAAAATAAATCTCGCTAAAACACGCCGAATCGA
CAGATCGCTAAAATTTATCCGTGCGAAATGTCTGGTTATATTGGGTTGGT
GTAATTTAAGATGCACGATCTAACGATTTACGATTCACGATGCGCGATCC
ATGCATAAAGTATG Coding sequence (CDS) from alignment at sc0000217:417915..424128- >TCONS_00015870 ID=TCONS_00015870|Name=TCONS_00015870|organism=Clytia hemisphaerica|type=CDS|length=9060bp|location=Sequence derived from alignment at sc0000217:417915..424128- (Clytia hemisphaerica) GTCATTTTAAAGGACTGCGTTCAGACGCAATCGCAGCAATCTGTTCAAAA CGTTCTCTCTCCGAACGCGACACATTTCGATAAGATGGCTGCTTTGAGCC ACCGTACCTTCATCGAAAAATCTAATATGGTTCAAGAGAAATTTGCTGGT CGCAAAGTCATTGCTTGTATGATTATGAAGCGCGCGGAGAGTGACGAAGG AGTAGTCGTTGCTCTTGGTGCAGGTAATCGATGTATAACGGGACAGCGGC TAAGCATGGAAGGAAAAGTAGTTAACGACTCGCACGCGGAAATCGTTTGT CGCCGTGCGTTCATTTCGTACTTATATAAGGAGCTAGAGAATCATATTGC AGGTAAGCAATCGATATTTCAAAACGGTGGCTCAAACGGAAAATTCAGTG TCAAAGAAGGTGTTTCGTTTCATTTGTATATCAGTACTGCGCCTTGTGGA GATGGTGCCTTGTTTACACCGAGACAAGATGAGAAAATATCGGATTTCCC TAAAAAACATTCGCCCGTTTTTTCGTCTAAAGTACACGGAATAACCCGAT CGAAGATTGAAAATGGGGAAGGGACAATCCCGATTGAGAAAGAAGAAGCA GTACAGACTTTTGATGGAATACTTCGGGGACAGCGTTTACGTACGATGTC TTGTAGTGATAAAATATGCCGTTGGAATGTGGTCGGTGTGCAGGGAGCGT TATTGAGTCATTTTATGGATCCTGTCTATTTGGGCTCGCTTACACTAGGT TATCTTTATGATCACGGGCATTTATGTAGAGCTATTTGTTGCAGGTTAGA TAAGAACAGCACTGGAGATTTCGAAGGAAAACTAGCTGAGCCGTTCCGTT TAAACCACCCTTGGATTGGGCGTGTCACCCAATATGAAGCTGGGCGGGAG ACGGAGAAAACGAATAACATTAGTATAAATTGGAGTTTCTATGATACGAC ACCTGAAGTCACAGACGGCCGGACCGGTGCTCAAATGAGCCGTACCGGCG GAATTCCAACGCCTTCTCGGCTTTGTAAATATGAAATGTTAAATCGGTTT CGTTCATTGATCGGGAAGACGAATGAACACAAACATTTGAGGGAAGATCA AAGTTATCGCGAGTTGAAAGACAGTGCGTTAGAATTTCAAAACACAAAAC AACTCATGATGGAAACGTTACGAACAATGAATTATGGACCGTGGGTTAAG AAACCAAGGGAGCAGGACATGTTCTGAGTTTAGTGTTGAAACAACCTGGT TTTGGCCTCGAAGCATGGAAAATCAATCCGAACTCTCCGACAGGTACACC GTCATCACTGCCAACGCAGCCAACACTTGCATCGAATCCACTTCTCCAGA AGACGTTCAATCCAGCGCAATCTCCTCCTATTGCTCAAAATACACCTTTA ACCAAAAAACAACGGAAGCAACTCAACAAAATGAACGCACAATCAACACC AAATTTGACTGTCACTCTTGACAACAGCTTTGGAGGTTCTCGATCCATAT CCACGCCACCTTTAACCAAAAAACAACGAAAACAACTGAACAAACATCAA TCACAATCTGCTTCAAACATGATGTCTTCGCCAGTAATAACAGCAAATGC AAGCTTTGGATCTCCATACAACACTCCTCTAACGAAGAAACAGAAAAAAC AGCTCAACACGCCCCTTATAACTCCACCGAAAACTGATTTCATGGTTTCT GCAGATATCTTTAACGCTTTGAACAAGAATCCAGTATCAGCGCTGAACGA GTTATGCCAAAAGAACGGGCGAACTGTTTCATTTGATTTGGTTGCGGAGA ATCGGTTCAATCAGAAGAACAAATTTACGGTTGCAGCAAACGTTAGCGGT AGGATGTATGATGCAGTGACAGCCTCAAATATGAAAGATGCACGACGAGA GGCCGCAGATGTCGCATTGAAGTCCAATCACTTGTACAAAGCTCTCCTGT CTTCATCAATCACAGCAGCAACAACAAAAGTCAAGAAGTTCTAGATTTGT TGAAGCAGTTCCCACGATCCTTATCAACCAAGGAAATTGAGAAGAATTTT TATCGTGTGTCAAAACAGCAACTGCAAACAACACTGGATCAACTCTGTGC TGGAGAACCAAGGTCTTCATACTCAATCATCAAATCCATTACTTATGAAC AGTTCATATAATTTTCAACAACAACAGCAAGGACAAGGCAAGAATAAGAA GAAAAAGAAAAATCAAGCAAGATTTCAACCCTATGAAAGACAACTTGTCA ATCAGACTGTAGGCAGTCATTTTAAAGGACTGCGTTCAGACGCAATCGCA GCAATCTGTTCAAAACGTTCTCTCTCCGAACGCGACACATTTCGATAAGA TGGCTGCTTTGAGCCACCGTACCTTCATCGAAAAATCTAATATGGTTCAA GAGAAATTTGCTGGTCGCAAAGTCATTGCTTGTATGATTATGAAGCGCGC GGAGAGTGACGAAGGAGTAGTCGTTGCTCTTGGTGCAGGTAATCGATGTA TAACGGGACAGCGGCTAAGCATGGAAGGAAAAGTAGTTAACGACTCGCAC GCGGAAATCGTTTGTCGCCGTGCGTTCATTTCGTACTTATATAAGGAGCT AGAGAATCATATTGCAGGTAAGCAATCGATATTTCAAAACGGTGGCTCAA ACGGAAAATTCAGTGTCAAAGAAGGTGTTTCGTTTCATTTGTATATCAGT ACTGCGCCTTGTGGAGATGGTGCCTTGTTTACACCGAGACAAGATGAGAA AATATCGGATTTCCCTAAAAAACATTCGCCCGTTTTTTCGTCTAAAGTAC ACGGAATAACCCGATCGAAGATTGAAAATGGGGAAGGGACAATCCCGATT GAGAAAGAAGAAGCAGTACAGACTTTTGATGGAATACTTCGGGGACAGCG TTTACGTACGATGTCTTGTAGTGATAAAATATGCCGTTGGAATGTGGTCG GTGTGCAGGGAGCGTTATTGAGTCATTTTATGGATCCTGTCTATTTGGGC TCGCTTACACTAGGTTATCTTTATGATCACGGGCATTTATGTAGAGCTAT TTGTTGCAGGTTAGATAAGAACAGCACTGGAGATTTCGAAGGAAAACTAG CTGAGCCGTTCCGTTTAAACCACCCTTGGATTGGGCGTGTCACCCAATAT GAAGCTGGGCGGGAGACGGAGAAAACGAATAACATTAGTATAAATTGGAG TTTCTATGATACGACACCTGAAGTCACAGACGGCCGGACCGGTGCTCAAA TGAGCCGTACCGGCGGAATTCCAACGCCTTCTCGGCTTTGTAAATATGAA ATGTTAAATCGGTTTCGTTCATTGATCGGGAAGACGAATGAACACAAACA TTTGAGGGAAGATCAAAGTTATCGCGAGTTGAAAGACAGTGCGTTAGAAT TTCAAAACACAAAACAACTCATGATGGAAACGTTACGAACAATGAATTAT GGACCGTGGGTTAAGAAACCAAGGGAGCAGGACATGTTCTGAGTTTAGTG TTGAAACAACCTGGTTTTGGCCTCGAAGCATGGAAAATCAATCCGAACTC TCCGACAGGTACACCGTCATCACTGCCAACGCAGCCAACACTTGCATCGA ATCCACTTCTCCAGAAGACGTTCAATCCAGCGCAATCTCCTCCTATTGCT CAAAATACACCTTTAACCAAAAAACAACGGAAGCAACTCAACAAAATGAA CGCACAATCAACACCAAATTTGACTGTCACTCTTGACAACAGCTTTGGAG GTTCTCGATCCATATCCACGCCACCTTTAACCAAAAAACAACGAAAACAA CTGAACAAACATCAATCACAATCTGCTTCAAACATGATGTCTTCGCCAGT AATAACAGCAAATGCAAGCTTTGGATCTCCATACAACACTCCTCTAACGA AGAAACAGAAAAAACAGCTCAACACGCCCCTTATAACTCCACCGAAAACT GATTTCATGGTTTCTGCAGATATCTTTAACGCTTTGAACAAGAATCCAGT ATCAGCGCTGAACGAGTTATGCCAAAAGAACGGGCGAACTGTTTCATTTG ATTTGGTTGCGGAGAATCGGTTCAATCAGAAGAACAAATTTACGGTTGCA GCAAACGTTAGCGGTAGGATGTATGATGCAGTGACAGCCTCAAATATGAA AGATGCACGACGAGAGGCCGCAGATGTCGCATTGAAGTCCAATCACTTGT ACAAAGCTCTCCTGTCTTCATCAATCACAGCAGCAACAACAAAAGTCAAG AAGTTCTAGATTTGTTGAAGCAGTTCCCACGATCCTTATCAACCAAGGAA ATTGAGAAGAATTTTTATCGTGTGTCAAAACAGCAACTGCAAACAACACT GGATCAACTCTGTGCTGGAGAACCAAGGTCTTCATACTCAATCATCAAAT CCATTACTTATGAACAGTTCATATAATTTTCAACAACAACAGCAAGGACA AGGCAAGAATAAGAAGAAAAAGAAAAATCAAGCAAGATTTCAACCCTATG AAAGACAACTTGTCAATCAGACTGTAGGCAGTCATTTTAAAGGACTGCGT TCAGACGCAATCGCAGCAATCTGTTCAAAACGTTCTCTCTCCGAACGCGA CACATTTCGATAAGATGGCTGCTTTGAGCCACCGTACCTTCATCGAAAAA TCTAATATGGTTCAAGAGAAATTTGCTGGTCGCAAAGTCATTGCTTGTAT GATTATGAAGCGCGCGGAGAGTGACGAAGGAGTAGTCGTTGCTCTTGGTG CAGGTAATCGATGTATAACGGGACAGCGGCTAAGCATGGAAGGAAAAGTA GTTAACGACTCGCACGCGGAAATCGTTTGTCGCCGTGCGTTCATTTCGTA CTTATATAAGGAGCTAGAGAATCATATTGCAGGTAAGCAATCGATATTTC AAAACGGTGGCTCAAACGGAAAATTCAGTGTCAAAGAAGGTGTTTCGTTT CATTTGTATATCAGTACTGCGCCTTGTGGAGATGGTGCCTTGTTTACACC GAGACAAGATGAGAAAATATCGGATTTCCCTAAAAAACATTCGCCCGTTT TTTCGTCTAAAGTACACGGAATAACCCGATCGAAGATTGAAAATGGGGAA GGGACAATCCCGATTGAGAAAGAAGAAGCAGTACAGACTTTTGATGGAAT ACTTCGGGGACAGCGTTTACGTACGATGTCTTGTAGTGATAAAATATGCC GTTGGAATGTGGTCGGTGTGCAGGGAGCGTTATTGAGTCATTTTATGGAT CCTGTCTATTTGGGCTCGCTTACACTAGGTTATCTTTATGATCACGGGCA TTTATGTAGAGCTATTTGTTGCAGGTTAGATAAGAACAGCACTGGAGATT TCGAAGGAAAACTAGCTGAGCCGTTCCGTTTAAACCACCCTTGGATTGGG CGTGTCACCCAATATGAAGCTGGGCGGGAGACGGAGAAAACGAATAACAT TAGTATAAATTGGAGTTTCTATGATACGACACCTGAAGTCACAGACGGCC GGACCGGTGCTCAAATGAGCCGTACCGGCGGAATTCCAACGCCTTCTCGG CTTTGTAAATATGAAATGTTAAATCGGTTTCGTTCATTGATCGGGAAGAC GAATGAACACAAACATTTGAGGGAAGATCAAAGTTATCGCGAGTTGAAAG ACAGTGCGTTAGAATTTCAAAACACAAAACAACTCATGATGGAAACGTTA CGAACAATGAATTATGGACCGTGGGTTAAGAAACCAAGGGAGCAGGACAT GTTCTGAGTTTAGTGTTGAAACAACCTGGTTTTGGCCTCGAAGCATGGAA AATCAATCCGAACTCTCCGACAGGTACACCGTCATCACTGCCAACGCAGC CAACACTTGCATCGAATCCACTTCTCCAGAAGACGTTCAATCCAGCGCAA TCTCCTCCTATTGCTCAAAATACACCTTTAACCAAAAAACAACGGAAGCA ACTCAACAAAATGAACGCACAATCAACACCAAATTTGACTGTCACTCTTG ACAACAGCTTTGGAGGTTCTCGATCCATATCCACGCCACCTTTAACCAAA AAACAACGAAAACAACTGAACAAACATCAATCACAATCTGCTTCAAACAT GATGTCTTCGCCAGTAATAACAGCAAATGCAAGCTTTGGATCTCCATACA ACACTCCTCTAACGAAGAAACAGAAAAAACAGCTCAACACGCCCCTTATA ACTCCACCGAAAACTGATTTCATGGTTTCTGCAGATATCTTTAACGCTTT GAACAAGAATCCAGTATCAGCGCTGAACGAGTTATGCCAAAAGAACGGGC GAACTGTTTCATTTGATTTGGTTGCGGAGAATCGGTTCAATCAGAAGAAC AAATTTACGGTTGCAGCAAACGTTAGCGGTAGGATGTATGATGCAGTGAC AGCCTCAAATATGAAAGATGCACGACGAGAGGCCGCAGATGTCGCATTGA AGTCCAATCACTTGTACAAAGCTCTCCTGTCTTCATCAATCACAGCAGCA ACAACAAAAGTCAAGAAGTTCTAGATTTGTTGAAGCAGTTCCCACGATCC TTATCAACCAAGGAAATTGAGAAGAATTTTTATCGTGTGTCAAAACAGCA ACTGCAAACAACACTGGATCAACTCTGTGCTGGAGAACCAAGGTCTTCAT ACTCAATCATCAAATCCATTACTTATGAACAGTTCATATAATTTTCAACA ACAACAGCAAGGACAAGGCAAGAATAAGAAGAAAAAGAAAAATCAAGCAA GATTTCAACCCTATGAAAGACAACTTGTCAATCAGACTGTAGGCAGTCAT TTTAAAGGACTGCGTTCAGACGCAATCGCAGCAATCTGTTCAAAACGTTC TCTCTCCGAACGCGACACATTTCGATAAGATGGCTGCTTTGAGCCACCGT ACCTTCATCGAAAAATCTAATATGGTTCAAGAGAAATTTGCTGGTCGCAA AGTCATTGCTTGTATGATTATGAAGCGCGCGGAGAGTGACGAAGGAGTAG TCGTTGCTCTTGGTGCAGGTAATCGATGTATAACGGGACAGCGGCTAAGC ATGGAAGGAAAAGTAGTTAACGACTCGCACGCGGAAATCGTTTGTCGCCG TGCGTTCATTTCGTACTTATATAAGGAGCTAGAGAATCATATTGCAGGTA AGCAATCGATATTTCAAAACGGTGGCTCAAACGGAAAATTCAGTGTCAAA GAAGGTGTTTCGTTTCATTTGTATATCAGTACTGCGCCTTGTGGAGATGG TGCCTTGTTTACACCGAGACAAGATGAGAAAATATCGGATTTCCCTAAAA AACATTCGCCCGTTTTTTCGTCTAAAGTACACGGAATAACCCGATCGAAG ATTGAAAATGGGGAAGGGACAATCCCGATTGAGAAAGAAGAAGCAGTACA GACTTTTGATGGAATACTTCGGGGACAGCGTTTACGTACGATGTCTTGTA GTGATAAAATATGCCGTTGGAATGTGGTCGGTGTGCAGGGAGCGTTATTG AGTCATTTTATGGATCCTGTCTATTTGGGCTCGCTTACACTAGGTTATCT TTATGATCACGGGCATTTATGTAGAGCTATTTGTTGCAGGTTAGATAAGA ACAGCACTGGAGATTTCGAAGGAAAACTAGCTGAGCCGTTCCGTTTAAAC CACCCTTGGATTGGGCGTGTCACCCAATATGAAGCTGGGCGGGAGACGGA GAAAACGAATAACATTAGTATAAATTGGAGTTTCTATGATACGACACCTG AAGTCACAGACGGCCGGACCGGTGCTCAAATGAGCCGTACCGGCGGAATT CCAACGCCTTCTCGGCTTTGTAAATATGAAATGTTAAATCGGTTTCGTTC ATTGATCGGGAAGACGAATGAACACAAACATTTGAGGGAAGATCAAAGTT ATCGCGAGTTGAAAGACAGTGCGTTAGAATTTCAAAACACAAAACAACTC ATGATGGAAACGTTACGAACAATGAATTATGGACCGTGGGTTAAGAAACC AAGGGAGCAGGACATGTTCTGAGTTTAGTGTTGAAACAACCTGGTTTTGG CCTCGAAGCATGGAAAATCAATCCGAACTCTCCGACAGGTACACCGTCAT CACTGCCAACGCAGCCAACACTTGCATCGAATCCACTTCTCCAGAAGACG TTCAATCCAGCGCAATCTCCTCCTATTGCTCAAAATACACCTTTAACCAA AAAACAACGGAAGCAACTCAACAAAATGAACGCACAATCAACACCAAATT TGACTGTCACTCTTGACAACAGCTTTGGAGGTTCTCGATCCATATCCACG CCACCTTTAACCAAAAAACAACGAAAACAACTGAACAAACATCAATCACA ATCTGCTTCAAACATGATGTCTTCGCCAGTAATAACAGCAAATGCAAGCT TTGGATCTCCATACAACACTCCTCTAACGAAGAAACAGAAAAAACAGCTC AACACGCCCCTTATAACTCCACCGAAAACTGATTTCATGGTTTCTGCAGA TATCTTTAACGCTTTGAACAAGAATCCAGTATCAGCGCTGAACGAGTTAT GCCAAAAGAACGGGCGAACTGTTTCATTTGATTTGGTTGCGGAGAATCGG TTCAATCAGAAGAACAAATTTACGGTTGCAGCAAACGTTAGCGGTAGGAT GTATGATGCAGTGACAGCCTCAAATATGAAAGATGCACGACGAGAGGCCG CAGATGTCGCATTGAAGTCCAATCACTTGTACAAAGCTCTCCTGTCTTCA TCAATCACAGCAGCAACAACAAAAGTCAAGAAGTTCTAGATTTGTTGAAG CAGTTCCCACGATCCTTATCAACCAAGGAAATTGAGAAGAATTTTTATCG TGTGTCAAAACAGCAACTGCAAACAACACTGGATCAACTCTGTGCTGGAG AACCAAGGTCTTCATACTCAATCATCAAATCCATTACTTATGAACAGTTC ATATAATTTTCAACAACAACAGCAAGGACAAGGCAAGAATAAGAAGAAAA AGAAAAATCAAGCAAGATTTCAACCCTATGAAAGACAACTTGTCAATCAG ACTGTAGGCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00015870-exon-sc0000217-1575043694:423968..424128 | TCONS_00015870-exon-sc0000217-1575043694:423968..424128 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1575043694:422003..422185 | TCONS_00015870-exon-sc0000217-1575043694:422003..422185 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1575043694:419869..420563 | TCONS_00015870-exon-sc0000217-1575043694:419869..420563 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1575043694:417915..419409 | TCONS_00015870-exon-sc0000217-1575043694:417915..419409 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1510915933:423968..424128 | TCONS_00015870-exon-sc0000217-1510915933:423968..424128 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1510915933:422003..422185 | TCONS_00015870-exon-sc0000217-1510915933:422003..422185 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1510915933:419869..420563 | TCONS_00015870-exon-sc0000217-1510915933:419869..420563 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1510915933:417915..419409 | TCONS_00015870-exon-sc0000217-1510915933:417915..419409 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1491911889:423968..424128 | TCONS_00015870-exon-sc0000217-1491911889:423968..424128 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1491911889:422003..422185 | TCONS_00015870-exon-sc0000217-1491911889:422003..422185 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1491911889:419869..420563 | TCONS_00015870-exon-sc0000217-1491911889:419869..420563 | Clytia hemisphaerica | exon |
| TCONS_00015870-exon-sc0000217-1491911889:417915..419409 | TCONS_00015870-exon-sc0000217-1491911889:417915..419409 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000217 | supercontig | sc0000217:417915..424128 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
| GO:0004000 | adenosine deaminase activity |
| GO:0003723 | RNA binding |
Vocabulary: Biological Process
| Term | Definition |
| GO:0006396 | RNA processing |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006396 |
RNA processing |
| molecular_function |
GO:0004000 |
adenosine deaminase activity |
| molecular_function |
GO:0003723 |
RNA binding |
Blast
BLAST of TCONS_00015870 vs. Swiss-Prot (Human)
Match: DSRAD (Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens GN=ADAR PE=1 SV=4) HSP 1 Score: 385.571 bits (989), Expect = 2.116e-116 Identity = 213/511 (41.68%), Postives = 290/511 (56.75%), Query Frame = 2
Query: 818 ADIFNALNKNPVSALNELCQKNGRTVSFDLVAENRFNQKNKFTVAANVSGRMYDAVTASNMKDARREAADVALKVILKD---------------CXXXXXXXXXXXXXXPNA----------THFDKMAALSHRTFIEKSNMVQEKFAGRKVIACMIMKRAESDEGVVVALGAGNRCITGQRLSMEGKVVNDSHAEIVCRRAFISYLYKEL--ENHIAGKQSIFQNGGSNGKFSVKEGVSFHLYISTAPCGDGALFTPR-QDEKISDFPKKHSPVFSSKVHGITRSKIENGEGTIPIEKEEAVQTFDGILRGQRLRTMSCSDKICRWNVVGVQGALLSHFMDPVYLGSLTLGYLYDHGHLCRAICCRLDKNSTGDFEGKLAEPFRLNHPWIGRVTQYEAGRETEKTNNISINWSFYDTTP-EVTDGRTGAQMSRTGGIPTPSRLCKYEMLNRFRSLIGKTNEHKHLREDQSYRELKDSALEFQNTKQLMMETLRTMNYGPWVKKPREQDMF 2263
++ LN NPV L E + +G F LV ++ + KF A V GR + AV A + K ++EAAD AL+V++ + + + + SP A T D++A LSHR F +N Q GRK++A +IMK+ D GVVV+LG GNRC+ G LS++G+ VND HAEI+ RR FI +LY EL N K SIF+ K +K+ VSFHLYISTAPCGDGALF D + +H PVF + G R+K+ENGEGTIP+E + V T+DGI G+RLRTMSCSDKI RWNV+G+QGALL+HF+ P+YL S+TLGYL+ GHL RAICCR+ ++ + FE L PF +NHP +GRV+ Y++ R++ KT S+NW D E+ DG G + G SR+ K + F+ L LR SY E K +A +++ K + L+ M YG W+ KP+E+ F
Sbjct: 717 GELVRYLNTNPVGGLLEYARSHGFAAEFKLVDQSGPPHEPKFVYQAKVGGRWFPAVCAHSKKQGKQEAADAALRVLIGENEKAERMGFTEVTPVTGASLRRTMLLLSRSPEAQPKTLPLTGSTFHDQIAMLSHRCFNTLTNSFQPSLLGRKILAAIIMKKDSEDMGVVVSLGTGNRCVKGDSLSLKGETVNDCHAEIISRRGFIRFLYSELMKYNSQTAKDSIFEPAKGGEKLQIKKTVSFHLYISTAPCGDGALFDKSCSDRAMESTESRHYPVFENPKQGKLRTKVENGEGTIPVESSDIVPTWDGIRLGERLRTMSCSDKILRWNVLGLQGALLTHFLQPIYLKSVTLGYLFSQGHLTRAICCRVTRDGSA-FEDGLRHPFIVNHPKVGRVSIYDSKRQSGKTKETSVNWCLADGYDLEILDGTRG---TVDGPRNELSRVSKKNIFLLFKKLCSFRYRRDLLR--LSYGEAKKAARDYETAKNYFKKGLKDMGYGNWISKPQEEKNF 1221
The following BLAST results are available for this feature:
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