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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015628 ID=TCONS_00015628|Name=TCONS_00015628|organism=Clytia hemisphaerica|type=transcript|length=1141bp
agaagaagagATCTACCAAGATATGGATGGTTTAAGGGGTGATTGTGTAT
CCAGTGGACAATCGAAAAAAGTCACTTACATCAACTACACATCACGTGAT
GTCATCGACGAAGAAGAAAATCCTTACGTCATAATGACGTCAGCACTGGA
CGACGAAAATGAACAAGAAGATCTCTACGACACCATCCCATCCATCATAA
ACCGTTTGAATACTATGCCTTCTTTATCCAAAAACGTAGATGAGAAAATC
GAGACGCGTAGGCGTAGATACACCACTGATGCAGTGTTCAGACCACggat
tgaaaatattcttcatagGGAGTTACCGCCTTGCCCACCCCCTCCAGTGC
CTACTTACGCCCACGAAACTGACAAAGATAATAAATTTTACGAGATTGTC
GATAATGATTCAGACTTGTACGAAACAATAGAACATGTGAAAAACTCCAG
TCTCTCCTCTCCAGTAGACAATGATTGTGCTTTTTATGAACCTATTCTCT
GTAATGAGAATTTAAGGAATTTAAGCGAAGAAGAACGATATCTTTCGCTC
ATCGAAATACAAGATGAACGACAATTAACGAAAGTTTGCGAACGAAAACC
GACCGGAAAACGAGTGCGAGGAATGCATCGTTGGAGTGATTCCGTTTTAC
CGATAACAACTAACGGTAATAATAACCTACCGACGACTATTCTCGAGATG
TTTCGATCGTTAACAAAAGATGAACGAGATCATCGATTACAAAATATTCA
CCGAACTTCTCGCCGACGATCAACGAGTATTTTACGAGCAACACGCTCTA
ACGAGGATAGTAAAGCCTGCAAAAATGACTTGAATAATAACAATAACAGC
ATTCgggaagaaattgaaaactatGAACAAACGACAACGAAAACGAAAAA
TTTGATTCGGGAATTGTCGTTAGAAGATAAAAACGACAACAAATCGTTTA
CAAAGGGACGAAAAACGAGCAATTCCGACTGTGAGAacgaaataaaaact
ttttctttcggACCTTTGTCTTTGTGATGAGAACACTCCCTTATCACAAC
AGACCACTGGGGAACTCTTCCCACCGAAAAAAATGACCAAAGTATCGTTC
TTAACTAACTTAACTAattcattattgaaaaaagaaatttt Run BLAST on NCBI protein sequence of TCONS_00015628-protein >TCONS_00015628-protein ID=TCONS_00015628-protein|Name=TCONS_00015628-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
EEEIYQDMDGLRGDCVSSGQSKKVTYINYTSRDVIDEEENPYVIMTSALD
DENEQEDLYDTIPSIINRLNTMPSLSKNVDEKIETRRRRYTTDAVFRPRI
ENILHRELPPCPPPPVPTYAHETDKDNKFYEIVDNDSDLYETIEHVKNSS
LSSPVDNDCAFYEPILCNENLRNLSEEERYLSLIEIQDERQLTKVCERKP
TGKRVRGMHRWSDSVLPITTNGNNNLPTTILEMFRSLTKDERDHRLQNIH
RTSRRRSTSILRATRSNEDSKACKNDLNNNNNSIREEIENYEQTTTKTKN
LIRELSLEDKNDNKSFTKGRKTSNSDCENEIKTFSFGPLSL Run BLAST on NCBI transcript from alignment at sc0000214:313586..317379- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015628 ID=TCONS_00015628|Name=TCONS_00015628|organism=Clytia hemisphaerica|type=transcript|length=3794bp|location=Sequence derived from alignment at sc0000214:313586..317379- (Clytia hemisphaerica)
AGAAGAAGAGGTATAACAGATATCGCTTTCTATGTTTCTTTCGAAACTTT
TATCTGACACACGAAGTAATGCAGGATTTGTTAGATAAACCCCCTCTAAA
TTATGGTTTCTTAATAAAGAATGTATAAGATTAAATACTATTAGTTACAC
GGTCTTGCTCGGCAAGCCTCGCCACCAATACGGTTTTTACTGACCCTGTA
TATCCCGTATCCCACCTCGAGACGACCGTGCAACGGATTTATCCCGTTGA
AGTCCCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCCTTTGCATGTGTTCCAAAAGCACG
AAAATTTTTCAGAACTCTCCAAGCAGATACTTACAATAAAGAGCAAACTG
TAAAAGCGGGATATGTGAAAGTGACATTTTATAGCATCGCAATTGATTGA
GCAAGAATCCATATCAACCCAAGAAAAGTAAATATCAAAATTACTTAAAG
ATTTTCTGCATCCTATTGACACAAACATTCTCAATCACTACAATTCACGT
CTTTTCCCCTTGTTTTATTTTTTCTGTCTTTTCAAAACAAAACATTCGAA
TTTTGAGCGAAACATTCGAAAGCGCATTCGTCAATATGCAATGTCTTCTT
TTTTCTCAATCGAATGCGAGGAAGACGGATACGGTTCATATCCCACCTCC
ACGTGATGTCTTTCGACCAATGGAATCGCGAGAATCTTACTGATGCGGGA
TAAAAATATATTGCTTTCGAAACTTTTATCTAACACACGATGTATGTAAA
AGTTTCTCCCGGAACGCTGAATCTCTGAAATTCGATAAAATTTTCAACAC
CTGGAAAGTTTAGAATAGTATCGACCAAAACTTAGTCGGCCCTAAGCGAC
TAACACTTAAGTTTTGGCTTGGTGACTAAAATTGGGCAGACTAAAAATTT
ATAATTAAGCTTTCCTTATTTTCCAGTATTTTAAGCTTTTTCCTATTTTC
CATCTGCTTGTAAATTTAGAAATGGCCCAAATTTTTAGTCGGTTTTAATT
ATTAGTCGGCCCTTAGTGATTAAATTTTGACGAGGTGACTAAAATTAGGG
CCGACTAATAATTAAGACCGACTAAAATTAAGGGCGAATAAGTTTTGACC
GATAAGGTATAGCGTTTCGCCAGACCACGGCAAAGATTTGTCAGTTGGAG
GCGCAAATCCCGGCCCTCGTTTTCGATACTTTCATTCTGAGGTTGCTAAA
TGTTGACAAAGTAACTAATCTTTTCAAAATCCTTGCTTGAGTGGAACGCG
TAAATCTAAATAACTGCTGCCTTTGTGGGCCACCATAATGAGATGTTTTG
CTACTCTAAAAAGTGCCCCAGTTTATAAGTTGGGCCATGTGCTTTTAAAT
AGTGTACAAAAGTGGTTTTAAAAACTTCGCAGTTCTTGAAAAAATTTTCT
GAGTACTGTAGTAGGGCTTAAGACTCAACAACTCGGTTTTTCATCTCAAC
TCAAAAAAAATAACTCGAAAAAAATAACTCGGCCTCAATTTCTGCGGACC
GGATAACTTTTCCGACGGCCAATTTTCCGTGGGCCGGATGACTAATTCGT
CGATATATCAACTGATATATCAGTTACCCGGTCAGATCCGCCCAGGTGGA
CAAACCGGTGAAAAAAATTGCTAAAAATGACCTAATTCTAAGCCTCAGTG
GATTGATGAGTGAACCCGGTCAAAATTAAACGAAATTTTCCGTCGCCAGC
AAAAGTTGGGAATTCATAGTCATCGTCATTTACACAATGTAGATCGAATC
GGTTAAAAATTCAAGATTTTCTTAACCATCTTTTTTTTCGAATTGAAAAA
TCTCACTGTCATTGCTCCGCCGGTGAAAATCAAGGTAATTTTTAAGACCT
CAAAATTAGACCTGGTGATATTTTACTATTTTCATAATTGTCCTGTTTCG
GTGTTTTTGTGAGCCCGATTGTAGAGAGAATGCAATTGGGCCTATGAGAC
AGGGGTGGTTCATTCATACCCTTCTATATACTTTAAGGGCAGAAAGTTTC
ACGGGCATTTAAAGTGATAGAGATGACGCGTTCTTTAGAAAAAAGTAATA
AAATTCTTTTATTACATCTTAACGACCAACCAAATCAAATAAGAGCTTGT
AAAAACTCCAGCTTGTCCCGCAGAAACTGTCGCAAAAAAGGATCAAAATC
ACGAAAAACGCGAAAGTTTCTACTCTTAAAGTAATCTTTTCTTTTACTTG
TTTTAGATCTACCAAGATATGGATGGTTTAAGGTATGTCGAAATATTTGC
GGAGGTTTTCAATTTATACTGGAAGTGGAAAAACACCCTTATCTCAATGA
GCATCGCGTACACATCTAAGATCGAGATTGCGATTAGAGGAGTAAAATAA
TAAAGCTCTGTGTAGACTTTTTCTACGATTCACCATCTCCAATTGGAGAG
AAACGCCTAAAAATGTTTTCCCCTGAGAAAAAAATCCCCGCTAACTTTTG
ATCATCCCCACACAATAGAATTTAAAACTCCCGCAGTTTTGATACAAGAC
ATTTTCCACATTAAATAGCATTATTTAGTCTCAACTAGCGATATATTTCT
CTCCCTCTCAATGAGACGGGGGTTATGTAGCAGTGCAGATGAGATTGGGT
CTTTTTACCTGTAATGCTCAAATTAGAAATGCATTTTAGGGGTGATTGTG
TATCCAGTGGACAATCGAAAAAAGTCACTTACATCAACTACACATCACGT
GATGTCATCGACGAAGAAGAAAATCCTTACGTCATAATGACGTCAGCACT
GGACGACGAAAATGAACAAGAAGATCTCTACGACACCATCCCATCCATCA
TAAACCGTTTGAATACTATGCCTTCTTTATCCAAAAACGTAGATGAGAAA
ATCGAGACGCGTAGGCGTAGATACACCACTGATGCAGTGTTCAGACCACG
GATTGAAAATATTCTTCATAGGGAGTTACCGCCTTGCCCACCCCCTCCAG
TGCCTACTTACGCCCACGAAACTGACAAAGATAATAAATTTTACGAGATT
GTCGATAATGATTCAGACTTGTACGAAACAATAGAACATGTGAAAAACTC
CAGTCTCTCCTCTCCAGTAGACAATGATTGTGCTTTTTATGAACCTATTC
TCTGTAATGAGAATTTAAGGAATTTAAGCGAAGAAGAACGATATCTTTCG
CTCATCGAAATACAAGATGAACGACAATTAACGAAAGTTTGCGAACGAAA
ACCGACCGGAAAACGAGTGCGAGGAATGCATCGTTGGAGTGATTCCGTTT
TACCGATAACAACTAACGGTAATAATAACCTACCGACGACTATTCTCGAG
ATGTTTCGATCGTTAACAAAAGATGAACGAGATCATCGATTACAAAATAT
TCACCGAACTTCTCGCCGACGATCAACGAGTATTTTACGAGCAACACGCT
CTAACGAGGATAGTAAAGCCTGCAAAAATGACTTGAATAATAACAATAAC
AGCATTCGGGAAGAAATTGAAAACTATGAACAAACGACAACGAAAACGAA
AAATTTGATTCGGGAATTGTCGTTAGAAGATAAAAACGACAACAAATCGT
TTACAAAGGGACGAAAAACGAGCAATTCCGACTGTGAGAACGAAATAAAA
ACTTTTTCTTTCGGACCTTTGTCTTTGTGATGAGAACACTCCCTTATCAC
AACAGACCACTGGGGAACTCTTCCCACCGAAAAAAATGACCAAAGTATCG
TTCTTAACTAACTTAACTAATTCATTATTGAAAAAAGAAATTTT Coding sequence (CDS) from alignment at sc0000214:313586..317379- >TCONS_00015628 ID=TCONS_00015628|Name=TCONS_00015628|organism=Clytia hemisphaerica|type=CDS|length=3078bp|location=Sequence derived from alignment at sc0000214:313586..317379- (Clytia hemisphaerica)
GGGTGATTGTGTATCCAGTGGACAATCGAAAAAAGTCACTTACATCAACT
ACACATCACGTGATGTCATCGACGAAGAAGAAAATCCTTACGTCATAATG
ACGTCAGCACTGGACGACGAAAATGAACAAGAAGATCTCTACGACACCAT
CCCATCCATCATAAACCGTTTGAATACTATGCCTTCTTTATCCAAAAACG
TAGATGAGAAAATCGAGACGCGTAGGCGTAGATACACCACTGATGCAGTG
TTCAGACCACGGATTGAAAATATTCTTCATAGGGAGTTACCGCCTTGCCC
ACCCCCTCCAGTGCCTACTTACGCCCACGAAACTGACAAAGATAATAAAT
TTTACGAGATTGTCGATAATGATTCAGACTTGTACGAAACAATAGAACAT
GTGAAAAACTCCAGTCTCTCCTCTCCAGTAGACAATGATTGTGCTTTTTA
TGAACCTATTCTCTGTAATGAGAATTTAAGGAATTTAAGCGAAGAAGAAC
GATATCTTTCGCTCATCGAAATACAAGATGAACGACAATTAACGAAAGTT
TGCGAACGAAAACCGACCGGAAAACGAGTGCGAGGAATGCATCGTTGGAG
TGATTCCGTTTTACCGATAACAACTAACGGTAATAATAACCTACCGACGA
CTATTCTCGAGATGTTTCGATCGTTAACAAAAGATGAACGAGATCATCGA
TTACAAAATATTCACCGAACTTCTCGCCGACGATCAACGAGTATTTTACG
AGCAACACGCTCTAACGAGGATAGTAAAGCCTGCAAAAATGACTTGAATA
ATAACAATAACAGCATTCGGGAAGAAATTGAAAACTATGAACAAACGACA
ACGAAAACGAAAAATTTGATTCGGGAATTGTCGTTAGAAGATAAAAACGA
CAACAAATCGTTTACAAAGGGACGAAAAACGAGCAATTCCGACTGTGAGA
ACGAAATAAAAACTTTTTCTTTCGGACCTTTGTCTTTGTGAATCTACCAA
GATATGGATGGTTTAAGGAAGAAGAGGGGTGATTGTGTATCCAGTGGACA
ATCGAAAAAAGTCACTTACATCAACTACACATCACGTGATGTCATCGACG
AAGAAGAAAATCCTTACGTCATAATGACGTCAGCACTGGACGACGAAAAT
GAACAAGAAGATCTCTACGACACCATCCCATCCATCATAAACCGTTTGAA
TACTATGCCTTCTTTATCCAAAAACGTAGATGAGAAAATCGAGACGCGTA
GGCGTAGATACACCACTGATGCAGTGTTCAGACCACGGATTGAAAATATT
CTTCATAGGGAGTTACCGCCTTGCCCACCCCCTCCAGTGCCTACTTACGC
CCACGAAACTGACAAAGATAATAAATTTTACGAGATTGTCGATAATGATT
CAGACTTGTACGAAACAATAGAACATGTGAAAAACTCCAGTCTCTCCTCT
CCAGTAGACAATGATTGTGCTTTTTATGAACCTATTCTCTGTAATGAGAA
TTTAAGGAATTTAAGCGAAGAAGAACGATATCTTTCGCTCATCGAAATAC
AAGATGAACGACAATTAACGAAAGTTTGCGAACGAAAACCGACCGGAAAA
CGAGTGCGAGGAATGCATCGTTGGAGTGATTCCGTTTTACCGATAACAAC
TAACGGTAATAATAACCTACCGACGACTATTCTCGAGATGTTTCGATCGT
TAACAAAAGATGAACGAGATCATCGATTACAAAATATTCACCGAACTTCT
CGCCGACGATCAACGAGTATTTTACGAGCAACACGCTCTAACGAGGATAG
TAAAGCCTGCAAAAATGACTTGAATAATAACAATAACAGCATTCGGGAAG
AAATTGAAAACTATGAACAAACGACAACGAAAACGAAAAATTTGATTCGG
GAATTGTCGTTAGAAGATAAAAACGACAACAAATCGTTTACAAAGGGACG
AAAAACGAGCAATTCCGACTGTGAGAACGAAATAAAAACTTTTTCTTTCG
GACCTTTGTCTTTGTGAATCTACCAAGATATGGATGGTTTAAGGAAGAAG
AGGGGTGATTGTGTATCCAGTGGACAATCGAAAAAAGTCACTTACATCAA
CTACACATCACGTGATGTCATCGACGAAGAAGAAAATCCTTACGTCATAA
TGACGTCAGCACTGGACGACGAAAATGAACAAGAAGATCTCTACGACACC
ATCCCATCCATCATAAACCGTTTGAATACTATGCCTTCTTTATCCAAAAA
CGTAGATGAGAAAATCGAGACGCGTAGGCGTAGATACACCACTGATGCAG
TGTTCAGACCACGGATTGAAAATATTCTTCATAGGGAGTTACCGCCTTGC
CCACCCCCTCCAGTGCCTACTTACGCCCACGAAACTGACAAAGATAATAA
ATTTTACGAGATTGTCGATAATGATTCAGACTTGTACGAAACAATAGAAC
ATGTGAAAAACTCCAGTCTCTCCTCTCCAGTAGACAATGATTGTGCTTTT
TATGAACCTATTCTCTGTAATGAGAATTTAAGGAATTTAAGCGAAGAAGA
ACGATATCTTTCGCTCATCGAAATACAAGATGAACGACAATTAACGAAAG
TTTGCGAACGAAAACCGACCGGAAAACGAGTGCGAGGAATGCATCGTTGG
AGTGATTCCGTTTTACCGATAACAACTAACGGTAATAATAACCTACCGAC
GACTATTCTCGAGATGTTTCGATCGTTAACAAAAGATGAACGAGATCATC
GATTACAAAATATTCACCGAACTTCTCGCCGACGATCAACGAGTATTTTA
CGAGCAACACGCTCTAACGAGGATAGTAAAGCCTGCAAAAATGACTTGAA
TAATAACAATAACAGCATTCGGGAAGAAATTGAAAACTATGAACAAACGA
CAACGAAAACGAAAAATTTGATTCGGGAATTGTCGTTAGAAGATAAAAAC
GACAACAAATCGTTTACAAAGGGACGAAAAACGAGCAATTCCGACTGTGA
GAACGAAATAAAAACTTTTTCTTTCGGACCTTTGTCTTTGTGAATCTACC
AAGATATGGATGGTTTAAGGAAGAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
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| TCONS_00015628-exon-sc0000214-1575043694:317370..317379 | TCONS_00015628-exon-sc0000214-1575043694:317370..317379 | Clytia hemisphaerica | exon |
| TCONS_00015628-exon-sc0000214-1575043694:315098..315123 | TCONS_00015628-exon-sc0000214-1575043694:315098..315123 | Clytia hemisphaerica | exon |
| TCONS_00015628-exon-sc0000214-1575043694:313586..314690 | TCONS_00015628-exon-sc0000214-1575043694:313586..314690 | Clytia hemisphaerica | exon |
| TCONS_00015628-exon-sc0000214-1510915933:317370..317379 | TCONS_00015628-exon-sc0000214-1510915933:317370..317379 | Clytia hemisphaerica | exon |
| TCONS_00015628-exon-sc0000214-1510915933:315098..315123 | TCONS_00015628-exon-sc0000214-1510915933:315098..315123 | Clytia hemisphaerica | exon |
| TCONS_00015628-exon-sc0000214-1510915933:313586..314690 | TCONS_00015628-exon-sc0000214-1510915933:313586..314690 | Clytia hemisphaerica | exon |
| TCONS_00015628-exon-sc0000214-1491911889:317370..317379 | TCONS_00015628-exon-sc0000214-1491911889:317370..317379 | Clytia hemisphaerica | exon |
| TCONS_00015628-exon-sc0000214-1491911889:315098..315123 | TCONS_00015628-exon-sc0000214-1491911889:315098..315123 | Clytia hemisphaerica | exon |
| TCONS_00015628-exon-sc0000214-1491911889:313586..314690 | TCONS_00015628-exon-sc0000214-1491911889:313586..314690 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000214 | supercontig | sc0000214:313586..317379 - |
Blast
The following BLAST results are available for this feature:
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