TCONS_00015444 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015444
Unique NameTCONS_00015444
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015444 ID=TCONS_00015444|Name=TCONS_00015444|organism=Clytia hemisphaerica|type=transcript|length=2143bp
gaaaaatattctaacgttctccttttttgtttttagtttcGTTTCGTTTT
GCGACTGTTGGTCGTCGCTGgtcaaaaatgaccaaaaagaaaatgttttc
gtGTTTTTGTTTACATGTGTTTTCATTTCACACTTGATACATAGTTTAGC
AGCTTCAGCCACCATGGTTCTTGATATATTGAGCTCACCAGAACATTTGC
AAATGTTACAATGCTACGGAGATGAGGAAACACAGGAGGAAAATCTCGTT
GGAAGGGATTAtgatattgagatttttcacGAGCCAGCGAATTTTAAACC
AAGATCGGGGAACGATCATGAGGCTCCGAAGCAGCGACGTGTGACGATTG
CTGATATGCCTGTCAATCATCCCCAATATCCTCCTGGGTATTCCGGCGAA
GggAGACAAAGATGCCGAAGCCGTTATTCAACCTTCATTGCGGGTATCAA
TCAATTCGATCCATACCAAGAGTTGACGGCCACGCAAATTGCTGCTTTTC
GTCAAGTCTTTGACATGGTTGACAGAGATGGTGGTGGAAGTATAGATGCC
AACGAACTGTATTACAGCATGAGAGATTTAGAATCTGGATTAATATTGGA
TGAGATCAAAGAGATTTTGGAAGAGCTTGATCGTGATGGGAACGGTGAAA
TTGATTTCGAAGAATTTCTTTACATGATGACCAGCATGAGCCTACAAATC
AAAGAGGCTCAAGAAGATAACGTATTGGTTAAACAAGGCAAACGTCGTCA
AAGCATCTTCTTTTCTGTCATTACAAAATTTGCTATGAAACATTCCTTGA
AAGAAATCGAGCATTACTACGCGAGCAAAGCTAAACGTTCTCCACACGTT
GTCGGACATTACATAGCTGGTGCTCGTGTCTTTGGCCTTACTGATAAAGA
ATTACGTAAAACATGGAAAGAATTCTCACACGCCAGTAAAGGGAAAGACT
CCCCTTACGCTCAGCCTTTGAACTTTATAGTCGATGATAACAATAACGga
aaaaagaagatgaagaaaacaGTCGTTCGTGCCATGCCGCGTGATAAAAA
AACAGAGTTGAAAACTTCTGTGGCGAATGATGATTCTCATAAGAAGTTCG
TCTTCAAATTGAAGAAAACTTCTAAACCCACCTCACCACAGCCTGTACAT
TGCACAAATACTGCCATAGATGCTGCTGCAAGTGAAAAGTCAGAACTCAA
TATAGAATGTTCTCCTCGCTCTGTATCTCCGTGTCCTGGGAGTCCATCTA
AATCGCCTAGTCCGTGCTCTGTGCGATCGACAAGCTCCACCCGAAGTGGT
GGCACCCTATCACCGACATTAGAAAAACGCGACGGTTGGACACCACGACA
TCGACTTCCAATGACTAAAGTGAAGCTTCCAAAATTTACGTATtctaaaa
aggaaaagaaactgGTCGTCAAAGATTTGGATAAGATTCGACAACGCGTC
AAAAAGACACGTGAAGCTTATCACGATGACCTcattaaagaaaaagaaga
cactgCAAAAGAATATTGGAAAAGTTTAAAAACGGGACAGATTTCTTCGG
AACGTTTACACACGAATTTCAAACGCGTTTTTCGTTGTTATTCGCCTTCA
AATGATGGCGAATTCGGTAATTTTGCATCGAAACATCAACGAAGTCCCGA
ACGTGCTTTGGATCTGCACCGTAGTAACGGAGGATTTGTACATTGAAAAC
AACAGTAACCAACATTttagtaaaatatctttcagcaaaatgactcaaaa
gATTACCTAAATTCTAACTATTTTCCTTGTAACAAATCAACTTCCAATCT
ACATCGATCGCTATGCTTTTTTCAGGGTCTGCAGACATACAAATTGAATA
ATTCGGGGATCATTGGGCTATTTCCAGAAAATAGTTCGTTCATTGAGAGT
GGAAGTtatgttatttttcaaatatctaCCCCTGGAAGTTTCGACACGTG
TTTTTCCCTGTTAGCCCTAATTGAGTCGTCAACTTTAAAAGGTTGTTGAG
CCAAAATTGACCATCAGTTTACggactaccttattacacaaatattacta
ggcaagtgttcaacggccttgaaattaacacgcacaaaattaacacgaat
tttatttgctttttcaaggacaccatggctggttttaattaag
Run BLAST on NCBI

protein sequence of TCONS_00015444-protein

>TCONS_00015444-protein ID=TCONS_00015444-protein|Name=TCONS_00015444-protein|organism=Clytia hemisphaerica|type=polypeptide|length=564bp
KNILTFSFFVFSFVSFCDCWSSLVKNDQKENVFVFLFTCVFISHLIHSLA
ASATMVLDILSSPEHLQMLQCYGDEETQEENLVGRDYDIEIFHEPANFKP
RSGNDHEAPKQRRVTIADMPVNHPQYPPGYSGEGRQRCRSRYSTFIAGIN
QFDPYQELTATQIAAFRQVFDMVDRDGGGSIDANELYYSMRDLESGLILD
EIKEILEELDRDGNGEIDFEEFLYMMTSMSLQIKEAQEDNVLVKQGKRRQ
SIFFSVITKFAMKHSLKEIEHYYASKAKRSPHVVGHYIAGARVFGLTDKE
LRKTWKEFSHASKGKDSPYAQPLNFIVDDNNNGKKKMKKTVVRAMPRDKK
TELKTSVANDDSHKKFVFKLKKTSKPTSPQPVHCTNTAIDAAASEKSELN
IECSPRSVSPCPGSPSKSPSPCSVRSTSSTRSGGTLSPTLEKRDGWTPRH
RLPMTKVKLPKFTYSKKEKKLVVKDLDKIRQRVKKTREAYHDDLIKEKED
TAKEYWKSLKTGQISSERLHTNFKRVFRCYSPSNDGEFGNFASKHQRSPE
RALDLHRSNGGFVH
Run BLAST on NCBI

transcript from alignment at sc0000211:316647..320378+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015444 ID=TCONS_00015444|Name=TCONS_00015444|organism=Clytia hemisphaerica|type=transcript|length=3732bp|location=Sequence derived from alignment at sc0000211:316647..320378+ (Clytia hemisphaerica)
gaaaaatattctaacgttctccttttttgtttttagtttcGTTTCGTTTT
GCGACTGTTGGTCGTCGCTGgtcaaaaatgaccaaaaagaaaatgttttc
gtGTTTTTGTTTACATGTGTTTTCATTTCACACTTGATACATAGTTTAGC
AGCTTCAGCCACCATGGTTCTTGATATATTGAGCTCACCAGAACATTTGC
AAATGTTACAATGCTACGGAGATGAGGAAACACAGGAGGAAAATCTCGTT
GGAAGGGATTAtgatattgagatttttcacGAGCCAGCGAATTTTAAACC
AAGATCGGGGAACGATCATGAGGCTCCGAAGCAGCGACGTGTGACGATTG
CTGATATGCCTGTCAATCATCCCCAATATCCTCCTGGGTATTCCGGCGAA
GGTTTGTAATCCGATCTTAAGTATCTAAGTTTATGtatattttttgcttt
attttcttCTCAGCATATCGAAGATTCTATTCAAAATGGGCTTTTCTCGT
CACTTGAAAGGTTTGAGATTTTCAAAACATGCAGatcttttctaaaattt
tagtttGAGATATATGACTTCCAGAAAgtaaacaatttaattttctgagA
TTTCAATCATCGTGTAGATAATATGATTAAAACTTTCGGCAAAAAGTGTT
ACAGATTTTCTTCGTTGATGCAGCATGGGCCGGGAGAGGAATAAAAAAAC
ACATTTATTCTCGCCAACGATAtcttttattcttattttcaaaattcagg
gAGACAAAGATGCCGAAGCCGTTATTCAACCTTCATTGCGGGTATCAATC
AATTCGATCCATACCAAGAGTTGACGGCCACGCAAATTGCTGCTTTTCGT
CAAGTCTTTGACATGGTTGACAGAGATGGTGGTGGAAGTATAGATGCCAA
CGAACTGTATTACAGCATGAGAGATTTAGAATCTGGATTAATATTGGATG
AGATCAAAGAGATTTTGGAAGAGCTTGATCGTGATGGGAACGGTGAAATT
GATTTCGAAGAATTTCTTTACATGATGACCAGCATGAGCCTACAAATCAA
AGGTGAGTTGTGATAGTATTCTTCAAATGACATCCTTTATACCTAAATCT
CATTTTAACATAGTATGGAGGCAATATTTACCAAATCCATGATATCCCTT
CAAACAAGCATTTGAATCTTTAAGACGTTGATTGCATTATCGATGGGTAT
TTAGCATTACTTTTAGACCCTTGGTTTATCATCACTTCTAGACCTTTGGC
TTGTTATTTGGACTACTCAGTACAAACTTTTCATTCATATCAACTTCAAT
CGATATCCTTTTTATTTTCAGAGGCTCAAGAAGATAACGTATTGGTTAAA
CAAGGCAAACGTCGTCAAAGCATCTTCTTTTCTGTCATTACAAAATTTGC
TATGAAACATTCCTTGAAAGAAATCGAGCATTACTACGCGAGCAAAGCTA
AACGTTCTCCACACGTTGTCGGACATTACATAGCTGGTGCTCGTGTCTTT
GGCCTTACTGATAAAGAATTACGTAAAACATGGAAAGAATTCTCACACGC
CAGTAAAGGGAAAGACTCCCCTTACGCTCAGCCTTTGAACTTTATAGTCG
ATGATAACAATAACGgaaaaaagaagatgaagaaaacaGTCGTTCGTGCC
ATGCCGCGTGATAAAAAAACAGAGTTGAAAACTTCTGTGGCGAATGATGA
TTCTCATAAGAAGTTCGTCTTCAAATTGAAGAAAACTTCTAAACCCACCT
CACCACAGCCTGTACATTGCACAAATACTGCCATAGATGCTGCTGCAAGT
GAAAAGTCAGAACTCAATATAGAATGTTCTCCTCGCTCTGTATCTCCGTG
TCCTGGGAGTCCATCTAAATCGCCTAGTCCGTGCTCTGTGCGATCGACAA
GCTCCACCCGAAGTGGTGGCACCCTATCACCGACATTAGAAAAACGCGAC
GGTTGGACACCACGACATCGACTTCCAATGACTAAAGTGAAGCTTCCAAA
ATTTACGTATTCTAAANAATAAATAGTCTTGCCTCTAGTATTCTTCAAAT
GACATCCTTTATACCTAAATCTCATTTTAACATAGTATGGAGGCAATATT
TACCAAATCCATGATATCCCTTCAAACAAGCATTTGAATCTTTAAGACGT
TGATTGCATTATCGATGGGTATTTAGCATTACTTTTAGACCCTTGGTTTA
TCATCACTTCTAGACCTTTGGCTTGTTATTTGGACTACTCAGTACAAACT
TTTCATTCATATCAACTTCAATCGATATCCTTTTTATTTTCAGAGGCTCA
AGAAGATAACGTATTGGTTAAACAAGGCAAACGTCGTCAAAGCATCTTCT
TTTCTGTCATTACAAAATTTGCTATGAAACATTCCTTGAAAGAAATCGAG
CATTACTACGCGAGCAAAGCTAAACGTTCTCCACACGTTGTCGGACATTA
CATAGCTGGTGCTCGTGTCTTTGGCCTTACTGATAAAGAATTACGTAAAA
CATGGAAAGAATTCTCACACGCCAGTAAAGGGAAAGACTCCCCTTACGCT
CAGCCTTTGAACTTTATAGTCGATGATAACAATAACGgaaaaaagaagat
gaagaaaacaGTCGTTCGTGCCATGCCGCGTGATAAAAAAACAGAGTTGA
AAACTTCTGTGGCGAATGATGATTCTCATAAGAAGTTCGTCTTCAAATTG
AAGAAAACTTCTAAACCCACCTCACCACAGCCTGTACATTGCACAAATAC
TGCCATAGATGCTGCTGCAAGTGAAAAGTCAGAACTCAATATAGAATGTT
CTCCTCGCTCTGTATCTCCGTGTCCTGGGAGTCCATCTAAATCGCCTAGT
CCGTGCTCTGTGCGATCGACAAGCTCCACCCGAAGTGGTGGCACCCTATC
ACCGACATTAGAAAAACGCGACGGTTGGACACCACGACATCGACTTCCAA
TGACTAAAGTGAAGCTTCCAAAATTTACGTATtctaaaaaggaaaagaaa
ctgGTCGTCAAAGATTTGGATAAGATTCGACAACGCGTCAAAAAGACACG
TGAAGCTTATCACGATGACCTcattaaagaaaaagaagacactgCAAAAG
AATATTGGAAAAGTTTAAAAACGGGACAGATTTCTTCGGAACGTTTACAC
ACGAATTTCAAACGCGTTTTTCGTTGTTATTCGCCTTCAAATGATGGCGA
ATTCGGTAATTTTGCATCGAAACATCAACGAAGTCCCGAACGTGCTTTGG
ATCTGCACCGTAGTAACGGAGGATTTGTACATTGAAAACAACAGTAACCA
ACATTttagtaaaatatctttcagcaaaatgactcaaaagATTACCTAAA
TTCTAACTATTTTCCTTGTAACAAATCAACTTCCAATCTACATCGATCGC
TATGCTTTTTTCAGGGTCTGCAGACATACAAATTGAATAATTCGGGGATC
ATTGGGCTATTTCCAGAAAATAGTTCGTTCATTGAGAGTGGAAGTtatgt
tatttttcaaatatctaCCCCTGGAAGTTTCGACACGTGTTTTTCCCTGT
TAGCCCTAATTGAGTCGTCAACTTTAAAAGGTTGTTGAGCCAAAATTGAC
CATCAGTTTACggactaccttattacacaaatattactaggcaagtgttc
aacggccttgaaattaacacgcacaaaattaacacgaattttatttgctt
tttcaaggacaccatggctggttttaattaag

Coding sequence (CDS) from alignment at sc0000211:316647..320378+

>TCONS_00015444 ID=TCONS_00015444|Name=TCONS_00015444|organism=Clytia hemisphaerica|type=CDS|length=6780bp|location=Sequence derived from alignment at sc0000211:316647..320378+ (Clytia hemisphaerica)
aaaaatattctaacgttctccttttttgtttttagtttcGTTTCGTTTTG
CGACTGTTGGTCGTCGCTGgtcaaaaatgaccaaaaagaaaatgttttcg
tGTTTTTGTTTACATGTGTTTTCATTTCACACTTGATACATAGTTTAGCA
GCTTCAGCCACCATGGTTCTTGATATATTGAGCTCACCAGAACATTTGCA
AATGTTACAATGCTACGGAGATGAGGAAACACAGGAGGAAAATCTCGTTG
GAAGGGATTAtgatattgagatttttcacGAGCCAGCGAATTTTAAACCA
AGATCGGGGAACGATCATGAGGCTCCGAAGCAGCGACGTGTGACGATTGC
TGATATGCCTGTCAATCATCCCCAATATCCTCCTGGGTATTCCGGCGAAG
ggAGACAAAGATGCCGAAGCCGTTATTCAACCTTCATTGCGGGTATCAAT
CAATTCGATCCATACCAAGAGTTGACGGCCACGCAAATTGCTGCTTTTCG
TCAAGTCTTTGACATGGTTGACAGAGATGGTGGTGGAAGTATAGATGCCA
ACGAACTGTATTACAGCATGAGAGATTTAGAATCTGGATTAATATTGGAT
GAGATCAAAGAGATTTTGGAAGAGCTTGATCGTGATGGGAACGGTGAAAT
TGATTTCGAAGAATTTCTTTACATGATGACCAGCATGAGCCTACAAATCA
AAGAGGCTCAAGAAGATAACGTATTGGTTAAACAAGGCAAACGTCGTCAA
AGCATCTTCTTTTCTGTCATTACAAAATTTGCTATGAAACATTCCTTGAA
AGAAATCGAGCATTACTACGCGAGCAAAGCTAAACGTTCTCCACACGTTG
TCGGACATTACATAGCTGGTGCTCGTGTCTTTGGCCTTACTGATAAAGAA
TTACGTAAAACATGGAAAGAATTCTCACACGCCAGTAAAGGGAAAGACTC
CCCTTACGCTCAGCCTTTGAACTTTATAGTCGATGATAACAATAACGgaa
aaaagaagatgaagaaaacaGTCGTTCGTGCCATGCCGCGTGATAAAAAA
ACAGAGTTGAAAACTTCTGTGGCGAATGATGATTCTCATAAGAAGTTCGT
CTTCAAATTGAAGAAAACTTCTAAACCCACCTCACCACAGCCTGTACATT
GCACAAATACTGCCATAGATGCTGCTGCAAGTGAAAAGTCAGAACTCAAT
ATAGAATGTTCTCCTCGCTCTGTATCTCCGTGTCCTGGGAGTCCATCTAA
ATCGCCTAGTCCGTGCTCTGTGCGATCGACAAGCTCCACCCGAAGTGGTG
GCACCCTATCACCGACATTAGAAAAACGCGACGGTTGGACACCACGACAT
CGACTTCCAATGACTAAAGTGAAGCTTCCAAAATTTACGTATtctaaaaa
ggaaaagaaactgGTCGTCAAAGATTTGGATAAGATTCGACAACGCGTCA
AAAAGACACGTGAAGCTTATCACGATGACCTcattaaagaaaaagaagac
actgCAAAAGAATATTGGAAAAGTTTAAAAACGGGACAGATTTCTTCGGA
ACGTTTACACACGAATTTCAAACGCGTTTTTCGTTGTTATTCGCCTTCAA
ATGATGGCGAATTCGGTAATTTTGCATCGAAACATCAACGAAGTCCCGAA
CGTGCTTTGGATCTGCACCGTAGTAACGGAGGATTTGTACATTGAaaaaa
tattctaacgttctccttttttgtttttagtttcGTTTCGTTTTGCGACT
GTTGGTCGTCGCTGgtcaaaaatgaccaaaaagaaaatgttttcgtGTTT
TTGTTTACATGTGTTTTCATTTCACACTTGATACATAGTTTAGCAGCTTC
AGCCACCATGGTTCTTGATATATTGAGCTCACCAGAACATTTGCAAATGT
TACAATGCTACGGAGATGAGGAAACACAGGAGGAAAATCTCGTTGGAAGG
GATTAtgatattgagatttttcacGAGCCAGCGAATTTTAAACCAAGATC
GGGGAACGATCATGAGGCTCCGAAGCAGCGACGTGTGACGATTGCTGATA
TGCCTGTCAATCATCCCCAATATCCTCCTGGGTATTCCGGCGAAGggAGA
CAAAGATGCCGAAGCCGTTATTCAACCTTCATTGCGGGTATCAATCAATT
CGATCCATACCAAGAGTTGACGGCCACGCAAATTGCTGCTTTTCGTCAAG
TCTTTGACATGGTTGACAGAGATGGTGGTGGAAGTATAGATGCCAACGAA
CTGTATTACAGCATGAGAGATTTAGAATCTGGATTAATATTGGATGAGAT
CAAAGAGATTTTGGAAGAGCTTGATCGTGATGGGAACGGTGAAATTGATT
TCGAAGAATTTCTTTACATGATGACCAGCATGAGCCTACAAATCAAAGAG
GCTCAAGAAGATAACGTATTGGTTAAACAAGGCAAACGTCGTCAAAGCAT
CTTCTTTTCTGTCATTACAAAATTTGCTATGAAACATTCCTTGAAAGAAA
TCGAGCATTACTACGCGAGCAAAGCTAAACGTTCTCCACACGTTGTCGGA
CATTACATAGCTGGTGCTCGTGTCTTTGGCCTTACTGATAAAGAATTACG
TAAAACATGGAAAGAATTCTCACACGCCAGTAAAGGGAAAGACTCCCCTT
ACGCTCAGCCTTTGAACTTTATAGTCGATGATAACAATAACGgaaaaaag
aagatgaagaaaacaGTCGTTCGTGCCATGCCGCGTGATAAAAAAACAGA
GTTGAAAACTTCTGTGGCGAATGATGATTCTCATAAGAAGTTCGTCTTCA
AATTGAAGAAAACTTCTAAACCCACCTCACCACAGCCTGTACATTGCACA
AATACTGCCATAGATGCTGCTGCAAGTGAAAAGTCAGAACTCAATATAGA
ATGTTCTCCTCGCTCTGTATCTCCGTGTCCTGGGAGTCCATCTAAATCGC
CTAGTCCGTGCTCTGTGCGATCGACAAGCTCCACCCGAAGTGGTGGCACC
CTATCACCGACATTAGAAAAACGCGACGGTTGGACACCACGACATCGACT
TCCAATGACTAAAGTGAAGCTTCCAAAATTTACGTATtctaaaaaggaaa
agaaactgGTCGTCAAAGATTTGGATAAGATTCGACAACGCGTCAAAAAG
ACACGTGAAGCTTATCACGATGACCTcattaaagaaaaagaagacactgC
AAAAGAATATTGGAAAAGTTTAAAAACGGGACAGATTTCTTCGGAACGTT
TACACACGAATTTCAAACGCGTTTTTCGTTGTTATTCGCCTTCAAATGAT
GGCGAATTCGGTAATTTTGCATCGAAACATCAACGAAGTCCCGAACGTGC
TTTGGATCTGCACCGTAGTAACGGAGGATTTGTACATTGAaaaaatattc
taacgttctccttttttgtttttagtttcGTTTCGTTTTGCGACTGTTGG
TCGTCGCTGgtcaaaaatgaccaaaaagaaaatgttttcgtGTTTTTGTT
TACATGTGTTTTCATTTCACACTTGATACATAGTTTAGCAGCTTCAGCCA
CCATGGTTCTTGATATATTGAGCTCACCAGAACATTTGCAAATGTTACAA
TGCTACGGAGATGAGGAAACACAGGAGGAAAATCTCGTTGGAAGGGATTA
tgatattgagatttttcacGAGCCAGCGAATTTTAAACCAAGATCGGGGA
ACGATCATGAGGCTCCGAAGCAGCGACGTGTGACGATTGCTGATATGCCT
GTCAATCATCCCCAATATCCTCCTGGGTATTCCGGCGAAGggAGACAAAG
ATGCCGAAGCCGTTATTCAACCTTCATTGCGGGTATCAATCAATTCGATC
CATACCAAGAGTTGACGGCCACGCAAATTGCTGCTTTTCGTCAAGTCTTT
GACATGGTTGACAGAGATGGTGGTGGAAGTATAGATGCCAACGAACTGTA
TTACAGCATGAGAGATTTAGAATCTGGATTAATATTGGATGAGATCAAAG
AGATTTTGGAAGAGCTTGATCGTGATGGGAACGGTGAAATTGATTTCGAA
GAATTTCTTTACATGATGACCAGCATGAGCCTACAAATCAAAGAGGCTCA
AGAAGATAACGTATTGGTTAAACAAGGCAAACGTCGTCAAAGCATCTTCT
TTTCTGTCATTACAAAATTTGCTATGAAACATTCCTTGAAAGAAATCGAG
CATTACTACGCGAGCAAAGCTAAACGTTCTCCACACGTTGTCGGACATTA
CATAGCTGGTGCTCGTGTCTTTGGCCTTACTGATAAAGAATTACGTAAAA
CATGGAAAGAATTCTCACACGCCAGTAAAGGGAAAGACTCCCCTTACGCT
CAGCCTTTGAACTTTATAGTCGATGATAACAATAACGgaaaaaagaagat
gaagaaaacaGTCGTTCGTGCCATGCCGCGTGATAAAAAAACAGAGTTGA
AAACTTCTGTGGCGAATGATGATTCTCATAAGAAGTTCGTCTTCAAATTG
AAGAAAACTTCTAAACCCACCTCACCACAGCCTGTACATTGCACAAATAC
TGCCATAGATGCTGCTGCAAGTGAAAAGTCAGAACTCAATATAGAATGTT
CTCCTCGCTCTGTATCTCCGTGTCCTGGGAGTCCATCTAAATCGCCTAGT
CCGTGCTCTGTGCGATCGACAAGCTCCACCCGAAGTGGTGGCACCCTATC
ACCGACATTAGAAAAACGCGACGGTTGGACACCACGACATCGACTTCCAA
TGACTAAAGTGAAGCTTCCAAAATTTACGTATtctaaaaaggaaaagaaa
ctgGTCGTCAAAGATTTGGATAAGATTCGACAACGCGTCAAAAAGACACG
TGAAGCTTATCACGATGACCTcattaaagaaaaagaagacactgCAAAAG
AATATTGGAAAAGTTTAAAAACGGGACAGATTTCTTCGGAACGTTTACAC
ACGAATTTCAAACGCGTTTTTCGTTGTTATTCGCCTTCAAATGATGGCGA
ATTCGGTAATTTTGCATCGAAACATCAACGAAGTCCCGAACGTGCTTTGG
ATCTGCACCGTAGTAACGGAGGATTTGTACATTGAaaaaatattctaacg
ttctccttttttgtttttagtttcGTTTCGTTTTGCGACTGTTGGTCGTC
GCTGgtcaaaaatgaccaaaaagaaaatgttttcgtGTTTTTGTTTACAT
GTGTTTTCATTTCACACTTGATACATAGTTTAGCAGCTTCAGCCACCATG
GTTCTTGATATATTGAGCTCACCAGAACATTTGCAAATGTTACAATGCTA
CGGAGATGAGGAAACACAGGAGGAAAATCTCGTTGGAAGGGATTAtgata
ttgagatttttcacGAGCCAGCGAATTTTAAACCAAGATCGGGGAACGAT
CATGAGGCTCCGAAGCAGCGACGTGTGACGATTGCTGATATGCCTGTCAA
TCATCCCCAATATCCTCCTGGGTATTCCGGCGAAGggAGACAAAGATGCC
GAAGCCGTTATTCAACCTTCATTGCGGGTATCAATCAATTCGATCCATAC
CAAGAGTTGACGGCCACGCAAATTGCTGCTTTTCGTCAAGTCTTTGACAT
GGTTGACAGAGATGGTGGTGGAAGTATAGATGCCAACGAACTGTATTACA
GCATGAGAGATTTAGAATCTGGATTAATATTGGATGAGATCAAAGAGATT
TTGGAAGAGCTTGATCGTGATGGGAACGGTGAAATTGATTTCGAAGAATT
TCTTTACATGATGACCAGCATGAGCCTACAAATCAAAGAGGCTCAAGAAG
ATAACGTATTGGTTAAACAAGGCAAACGTCGTCAAAGCATCTTCTTTTCT
GTCATTACAAAATTTGCTATGAAACATTCCTTGAAAGAAATCGAGCATTA
CTACGCGAGCAAAGCTAAACGTTCTCCACACGTTGTCGGACATTACATAG
CTGGTGCTCGTGTCTTTGGCCTTACTGATAAAGAATTACGTAAAACATGG
AAAGAATTCTCACACGCCAGTAAAGGGAAAGACTCCCCTTACGCTCAGCC
TTTGAACTTTATAGTCGATGATAACAATAACGgaaaaaagaagatgaaga
aaacaGTCGTTCGTGCCATGCCGCGTGATAAAAAAACAGAGTTGAAAACT
TCTGTGGCGAATGATGATTCTCATAAGAAGTTCGTCTTCAAATTGAAGAA
AACTTCTAAACCCACCTCACCACAGCCTGTACATTGCACAAATACTGCCA
TAGATGCTGCTGCAAGTGAAAAGTCAGAACTCAATATAGAATGTTCTCCT
CGCTCTGTATCTCCGTGTCCTGGGAGTCCATCTAAATCGCCTAGTCCGTG
CTCTGTGCGATCGACAAGCTCCACCCGAAGTGGTGGCACCCTATCACCGA
CATTAGAAAAACGCGACGGTTGGACACCACGACATCGACTTCCAATGACT
AAAGTGAAGCTTCCAAAATTTACGTATtctaaaaaggaaaagaaactgGT
CGTCAAAGATTTGGATAAGATTCGACAACGCGTCAAAAAGACACGTGAAG
CTTATCACGATGACCTcattaaagaaaaagaagacactgCAAAAGAATAT
TGGAAAAGTTTAAAAACGGGACAGATTTCTTCGGAACGTTTACACACGAA
TTTCAAACGCGTTTTTCGTTGTTATTCGCCTTCAAATGATGGCGAATTCG
GTAATTTTGCATCGAAACATCAACGAAGTCCCGAACGTGCTTTGGATCTG
CACCGTAGTAACGGAGGATTTGTACATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008622XLOC_008622Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015444-exon-sc0000211-1491911889:316647..317047TCONS_00015444-exon-sc0000211-1491911889:316647..317047Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1510915933:316647..317047TCONS_00015444-exon-sc0000211-1510915933:316647..317047Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1575043694:316647..317047TCONS_00015444-exon-sc0000211-1575043694:316647..317047Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1491911889:317396..317698TCONS_00015444-exon-sc0000211-1491911889:317396..317698Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1510915933:317396..317698TCONS_00015444-exon-sc0000211-1510915933:317396..317698Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1575043694:317396..317698TCONS_00015444-exon-sc0000211-1575043694:317396..317698Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1491911889:317968..318000TCONS_00015444-exon-sc0000211-1491911889:317968..318000Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1510915933:317968..318000TCONS_00015444-exon-sc0000211-1510915933:317968..318000Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1575043694:317968..318000TCONS_00015444-exon-sc0000211-1575043694:317968..318000Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1491911889:318973..320378TCONS_00015444-exon-sc0000211-1491911889:318973..320378Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1510915933:318973..320378TCONS_00015444-exon-sc0000211-1510915933:318973..320378Clytia hemisphaericaexon
TCONS_00015444-exon-sc0000211-1575043694:318973..320378TCONS_00015444-exon-sc0000211-1575043694:318973..320378Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015444-proteinTCONS_00015444-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000211supercontigsc0000211:316647..320378 +
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0642048	0.0804983	0.0415406	0.0473492	0.489966	0.409953	0.247295	0.353271	0.123667	0.178465	0	0.0569349	0.0284279	0.03801	0.0728148	0.0651179	0.0641759	0.148001	0.263254	0.0713848	0.0402458	0.0519067	0.0630994	0.0764887	46.3286	18.4107	0.0586109	0	0.091623	0.072605
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR001751S100/CaBP-9k_CS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015444 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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