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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015375 ID=TCONS_00015375|Name=TCONS_00015375|organism=Clytia hemisphaerica|type=transcript|length=1026bp
TCCATGGTGACAAAATGTTGGCTAGTGATAGAAATGGAACTGTTTCCAAC
ACAAACAGCCGGAAAGAAAGTCCATCCAGACTCCAGATTATCTCCCAGTC
TTTCCTCAAACAATTGATGGTTCGAATCTAACTGCTCGAAAACTCGATCG
TTTTTTAGTTCGCTTTTCATCTCTACGGAAATGATGAGTTTTCTTTGCCA
TGAGATGATCAAAAAGTCTGCTTCTTTATGCATCTTGTTTCGAACATTTG
TCAGAAAATTGACAGATGAAAGAACAACTGTGTCTTGgagaatgtcattt
tttaacGGTAAGAGTTGATTATAAAGCCAGTGTTCAACATGCTCTCCGAG
CTCTGCCAACTCTAAATCGAAAAGCCATCGAAGATTCGAATCATGTGTCT
CGTTCTCCTCGATCTTCTGTTTTAACAGCttcttgaaattctttttggag
AGACATTCGCGTAGAAAAGCTTTAAGCTCTGGCTCTGGTGATGTCGAAGG
AAGTTCGTTGATGCACCCTTGAACGAAGACTCCCAGGTCTGATGTAGTTG
TTGGTAGTTTGTCATGGTCTGTTTTGAACTCGTCAATAACCAAATACATG
ATTTTGAGGTTCACAATCCATTTGTCAAACGCGTTCTTGTCAATACGATC
AGCACCATTTTGTGTCTGCATGAAATGTTCTAATTCCTTCGTCATCCAGT
GTCCTGGTGAATCCTTTTTCAAGTTGACCAAAAGTCTTTCAAGATCTTTC
TTGACTTCATAATCCAGAATAGCTACGGTTGATTTCTTCGTATATTGTTG
TGAAACAAACGTTGGAGGTATGAAGACAGCCTCGTGTAAATCGTTCTTGA
AAAGTGAAGATTCACCGTATTCTCTTTGAAGTAGGAACATCGCAGCTTTG
ATCGGGTCATTAAACGTAAGGGTGTTCCCCAAATTAAATTGTTTGACTTG
ACGCTTCCATACAGTTTGGTTGTTCTTGATAATCTGCCAGTATAACGATT
TATTTGGATGACACTTTAAAGGATCG Run BLAST on NCBI protein sequence of TCONS_00015375-protein >TCONS_00015375-protein ID=TCONS_00015375-protein|Name=TCONS_00015375-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
DPLKCHPNKSLYWQIIKNNQTVWKRQVKQFNLGNTLTFNDPIKAAMFLLQ
REYGESSLFKNDLHEAVFIPPTFVSQQYTKKSTVAILDYEVKKDLERLLV
NLKKDSPGHWMTKELEHFMQTQNGADRIDKNAFDKWIVNLKIMYLVIDEF
KTDHDKLPTTTSDLGVFVQGCINELPSTSPEPELKAFLRECLSKKNFKKL
LKQKIEENETHDSNLRWLFDLELAELGEHVEHWLYNQLLPLKNDILQDTV
VLSSVNFLTNVRNKMHKEADFLIISWQRKLIISVEMKSELKNDRVFEQLD
SNHQLFEERLGDNLESGWTFFPAVCVGNSSISITSQHFVTM Run BLAST on NCBI transcript from alignment at sc0000210:94357..95382 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015375 ID=TCONS_00015375|Name=TCONS_00015375|organism=Clytia hemisphaerica|type=transcript|length=1026bp|location=Sequence derived from alignment at sc0000210:94357..95382 (Clytia hemisphaerica)
CGATCCTTTAAAGTGTCATCCAAATAAATCGTTATACTGGCAGATTATCA
AGAACAACCAAACTGTATGGAAGCGTCAAGTCAAACAATTTAATTTGGGG
AACACCCTTACGTTTAATGACCCGATCAAAGCTGCGATGTTCCTACTTCA
AAGAGAATACGGTGAATCTTCACTTTTCAAGAACGATTTACACGAGGCTG
TCTTCATACCTCCAACGTTTGTTTCACAACAATATACGAAGAAATCAACC
GTAGCTATTCTGGATTATGAAGTCAAGAAAGATCTTGAAAGACTTTTGGT
CAACTTGAAAAAGGATTCACCAGGACACTGGATGACGAAGGAATTAGAAC
ATTTCATGCAGACACAAAATGGTGCTGATCGTATTGACAAGAACGCGTTT
GACAAATGGATTGTGAACCTCAAAATCATGTATTTGGTTATTGACGAGTT
CAAAACAGACCATGACAAACTACCAACAACTACATCAGACCTGGGAGTCT
TCGTTCAAGGGTGCATCAACGAACTTCCTTCGACATCACCAGAGCCAGAG
CTTAAAGCTTTTCTACGCGAATGTCTctccaaaaagaatttcaagaaGCT
GTTAAAACAGAAGATCGAGGAGAACGAGACACATGATTCGAATCTTCGAT
GGCTTTTCGATTTAGAGTTGGCAGAGCTCGGAGAGCATGTTGAACACTGG
CTTTATAATCAACTCTTACCgttaaaaaatgacattctcCAAGACACAGT
TGTTCTTTCATCTGTCAATTTTCTGACAAATGTTCGAAACAAGATGCATA
AAGAAGCAGACTTTTTGATCATCTCATGGCAAAGAAAACTCATCATTTCC
GTAGAGATGAAAAGCGAACTAAAAAACGATCGAGTTTTCGAGCAGTTAGA
TTCGAACCATCAATTGTTTGAGGAAAGACTGGGAGATAATCTGGAGTCTG
GATGGACTTTCTTTCCGGCTGTTTGTGTTGGAAACAGTTCCATTTCTATC
ACTAGCCAACATTTTGTCACCATGGA Coding sequence (CDS) from alignment at sc0000210:94357..95382 >TCONS_00015375 ID=TCONS_00015375|Name=TCONS_00015375|organism=Clytia hemisphaerica|type=CDS|length=1023bp|location=Sequence derived from alignment at sc0000210:94357..95382 (Clytia hemisphaerica)
GATCCTTTAAAGTGTCATCCAAATAAATCGTTATACTGGCAGATTATCAA
GAACAACCAAACTGTATGGAAGCGTCAAGTCAAACAATTTAATTTGGGGA
ACACCCTTACGTTTAATGACCCGATCAAAGCTGCGATGTTCCTACTTCAA
AGAGAATACGGTGAATCTTCACTTTTCAAGAACGATTTACACGAGGCTGT
CTTCATACCTCCAACGTTTGTTTCACAACAATATACGAAGAAATCAACCG
TAGCTATTCTGGATTATGAAGTCAAGAAAGATCTTGAAAGACTTTTGGTC
AACTTGAAAAAGGATTCACCAGGACACTGGATGACGAAGGAATTAGAACA
TTTCATGCAGACACAAAATGGTGCTGATCGTATTGACAAGAACGCGTTTG
ACAAATGGATTGTGAACCTCAAAATCATGTATTTGGTTATTGACGAGTTC
AAAACAGACCATGACAAACTACCAACAACTACATCAGACCTGGGAGTCTT
CGTTCAAGGGTGCATCAACGAACTTCCTTCGACATCACCAGAGCCAGAGC
TTAAAGCTTTTCTACGCGAATGTCTctccaaaaagaatttcaagaaGCTG
TTAAAACAGAAGATCGAGGAGAACGAGACACATGATTCGAATCTTCGATG
GCTTTTCGATTTAGAGTTGGCAGAGCTCGGAGAGCATGTTGAACACTGGC
TTTATAATCAACTCTTACCgttaaaaaatgacattctcCAAGACACAGTT
GTTCTTTCATCTGTCAATTTTCTGACAAATGTTCGAAACAAGATGCATAA
AGAAGCAGACTTTTTGATCATCTCATGGCAAAGAAAACTCATCATTTCCG
TAGAGATGAAAAGCGAACTAAAAAACGATCGAGTTTTCGAGCAGTTAGAT
TCGAACCATCAATTGTTTGAGGAAAGACTGGGAGATAATCTGGAGTCTGG
ATGGACTTTCTTTCCGGCTGTTTGTGTTGGAAACAGTTCCATTTCTATCA
CTAGCCAACATTTTGTCACCATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015375-exon-sc0000210-1491911889:94357..95382 | TCONS_00015375-exon-sc0000210-1491911889:94357..95382 | Clytia hemisphaerica | exon |
| TCONS_00015375-exon-sc0000210-1510915933:94357..95382 | TCONS_00015375-exon-sc0000210-1510915933:94357..95382 | Clytia hemisphaerica | exon |
| TCONS_00015375-exon-sc0000210-1575043694:94357..95382 | TCONS_00015375-exon-sc0000210-1575043694:94357..95382 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000210 | supercontig | sc0000210:94357..95382 . |
Blast
The following BLAST results are available for this feature:
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