|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015275 ID=TCONS_00015275|Name=TCONS_00015275|organism=Clytia hemisphaerica|type=transcript|length=668bp
CTTTCCAACGAAATAGGAacggttcttttaaaatttttagatttcgagaa
aattagtttcaaagagggaaacttttttgtggcgcacccggtagaatttt
agtttttttagtcattttcatattttattcaaaaacgaaaGCTTTATTAT
TAGAATTTTATATGGTCAAATCATTGATATGAATAGGTCAGTTCTGGCTA
GAGTTGCCGATGATTTGTTTCTTAACGGTTTTCAAAAATTCGAAAGAATC
TAGCCGGAGCTCTGTTCTAAACTCTGTCTCAATATGATTTGCAGCAGAAC
CAATAGAggctttgtaatttttgatagaatttgaattgaattgtttttga
aaaaagttactTTTCGCGAAAAGGCTAAACTCGCAAAAAtagcgaaagtt
tctgctcgcgacaGTTTGTAAGCCTAAAGTAATCTcaaagatgaaatatt
tttcaaaaattttaaaatggagATGGAAAAAATTGAAGTTCAAAAATCAT
GATATCAGattttttagaatatttaaaCCCTGTTTTCTTTCTTGAATAAA
AAGTTAGAGCAAGAAGGCCAAAAGTGACCAAAAATAACCAatataaatca
taaattttgataaaatttgacaGATTATTTTGTAACAATTACAAGTATAT
AATAACTTTATCACGTGA Run BLAST on NCBI transcript from alignment at sc0000208:109227..109961- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015275 ID=TCONS_00015275|Name=TCONS_00015275|organism=Clytia hemisphaerica|type=transcript|length=735bp|location=Sequence derived from alignment at sc0000208:109227..109961- (Clytia hemisphaerica)
CTTTCCAACGAAATAGGAACGGTTCTTTTAAAATTTTTAGATTTCGAGAA
AATTAGTTTCAAAGAGGGAAACTTTTTTGTGGCGCACCCGGTAGAATTTT
AGTTTTTTTAGTCATTTTCATATTTTATTCAAAAACGAAAGCTTTATTAT
TAGAATTTTATATGGTCAAATCATTGATATGAATAGGTCAGTTCTGGCTA
GAGTTGCCGATGATTTGTTTCTTAACGGTTTTCAAAAATTCGAAAGAATC
TAGCCGGAGCTCTGTTCTAAACTCTGTCTCAATATGATTTGCAGCAGAAG
CAAAAGAGGCTTTGTAACTTTTGATAGAATTTGAATTGAATTGAATCTGA
TTGAATTTANGCAGAGCCAATAGAGGCTTTGTAATTTTTGATAGAATTTG
AATTGAATTGTTTTTGAAAAAAGTTACTTTTCGCGAAAAGGCTAAACTCG
CAAAAATAGCGAAAGTTTCTGCTCGCGACAGTTTGTAAGCCTAAAGTAAT
CTCAAAGATGAAATATTTTTCAAAAATTTTAAAATGGAGATGGAAAAAAT
TGAAGTTCAAAAATCATGATATCAGATTTTTTAGAATATTTAAACCCTGT
TTTCTTTCTTGAATAAAAAGTTAGAGCAAGAAGGCCAAAAGTGACCAAAA
ATAACCAATATAAATCATAAATTTTGATAAAATTTGACAGATTATTTTGT
AACAATTACAAGTATATAATAACTTTATCACGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015275-exon-sc0000208-1575043694:109663..109961 | TCONS_00015275-exon-sc0000208-1575043694:109663..109961 | Clytia hemisphaerica | exon |
| TCONS_00015275-exon-sc0000208-1575043694:109227..109595 | TCONS_00015275-exon-sc0000208-1575043694:109227..109595 | Clytia hemisphaerica | exon |
| TCONS_00015275-exon-sc0000208-1510915933:109663..109961 | TCONS_00015275-exon-sc0000208-1510915933:109663..109961 | Clytia hemisphaerica | exon |
| TCONS_00015275-exon-sc0000208-1510915933:109227..109595 | TCONS_00015275-exon-sc0000208-1510915933:109227..109595 | Clytia hemisphaerica | exon |
| TCONS_00015275-exon-sc0000208-1491911889:109663..109961 | TCONS_00015275-exon-sc0000208-1491911889:109663..109961 | Clytia hemisphaerica | exon |
| TCONS_00015275-exon-sc0000208-1491911889:109227..109595 | TCONS_00015275-exon-sc0000208-1491911889:109227..109595 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000208 | supercontig | sc0000208:109227..109961 - |
Blast
The following BLAST results are available for this feature:
|
