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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015195 ID=TCONS_00015195|Name=TCONS_00015195|organism=Clytia hemisphaerica|type=transcript|length=3095bp caattttgacgactttttattttggttgccatagtaaccaatgacgtcag tttccatggcaacgggtggtcacacccggccccacctctcaaattttgat cttctacattcaaggaacattattcaatcataaaatccctttgcacaagc tgctgcacacgggaagctttttcgcgacatagtggcccctactaTTAATT CTTTTTGCTTACAGGGGAAAATATCATATTCTGTTATAAAAGTAAATGCT AAATGCAAGTATTTTTCAAAGAGATTAAGCTTTTCTGTTAAGGAATTTAT AATGGCTACCAAGGTAGACCCAGAAGAAGCTATTGTACCAATAAACTCTG AAATCCATCGCAATAATTATCACCATACAGTTCAAAATGACAACTGTAGT AATCAGACAAACAATGGTAAAGTGGCTGAAGGTTTATCAAACAAAGGTTT TAGCTTGAATGCGGAAACAGAGAAACAAGGATCGCTGCAGGATGAAAGTT TAAAAGATGGTTGTAACAGTAACGATGCGGATTATGATAACTGTGATAAT CAGCTCCAAGGAGATATTATATTTTGTCCAACAAATGCTGAATTAGATAA ACATAACTTGGTTGATAAAAGCGATGTTCCGAATCACAAACCATCTGAAC AAAACACAATCAAAAATAATAGTAAGACTACCCAACAAAAAGAGCGCAAA TCTTCAAATGATGTTATCACTGACCAAGTTGACGAAAAGAAACCATTGCT ACAACCACCAACTTGCTCAGAAAATACAGGAGAAAGATTACCTACATGTA GACTTATTATCACTTCAATGAAGCACGTTCTGTGGATTGGCCTTTCAGCT CTACCAACTATAATTATTGTTTGTATGGCAGGTTTTGGTTATTCTCATTT AAAATGGAcaagaaaaattctaaataatggAACTACAACAGACGATGGTG GTATTAACTATTATTTTAACCGTTGGACTGTATTCtggtttgatgacgtc atgagaACATTCCTGATTACTCTATTGAATGTTATCGTTGCATGTGTATT ATACAACCTAAGTATGCGTAAAACATTATACCTTATTGTAAGTGTGGCAC TACCTATCACTTTGACTGGctcgttttgtttttattgtatgttGCAATGG TATACTTCAGATCCTTATGCTGTGTGGTTTTACTACATAGACATTGTCAT TTTCATGATGGCGTTCTTCCTGGTTGTACCATTGGCTCAATTACTAGCAG CAAAACAAGTGGGCGCAAAACTTTTAGAGGCGACCAAGCTCTACATTTTA CCAATGTTTTTGATGGCCCTTGGGATAGCATTTGTGGATATTTATTTCTC AAAGAGTTATCGTGTTGAGGAAGATGGATCACTTTTGAAATACAGTCAAC GACTTATTGTGTATCCAGTTCTAATGGACAGCTTTTTGAGTCTTGGTGAA TTCTTTGTCAGGAGATTGGAAGGTACAACCGTTCGTGGTGAAGCTCATTC ATTGTATCTTATTCAAGTTCGCTTCGGAATCCTTGGAAGATACATGAATC TGACTGCAGggaATTTAACCATGCTGACCATAACATGTAGCCTGGTCATG CTCAAAGATGTTGTATTGCACAGAATGGGTCGAATACAATGTTGGATGTT CTATAAAATCCGTCGGTTTTTTAAACGTGAGCAAAGTTCAACTGAAGAAT TTCGTGCATGGTATTTTGAGGAACGTTTCTGTAATTTTCGTGCTTGTGTT TTGAACAATGACTTGTTACATGAGTTCACAGCCACCATTGTGACGCCCAT TCTCTTAGTTTTCTTCCGCCCTCACCGCCTCTTATTCCGCTTTGATGACG ATCTCTTCATCAACACTAAATCGGGATTATTCGAACCGGGATTATTCTAC GCCCAGTTTTTCATCCAAATCGGATTTCTATTCATCACATACGTTTTTAT AGTATTTATTGAAGGACGTTTTAATGGAGTGCATCTCCGCTATGCTTTCG CTCAACGCAATCTGCTTCAAGAAATATCCCAGATTGTTATTTATTTGTGG GGCATGTTGCAGATTTTATCGGCTGTTCGCGTCATACCGAACTACTTTCA GTGCGACACATCGAACATTTGTAGCTGTCATTTCAATATCAATAAAACTG AGTATGGATGTTGATTGTGAGTGCTTACGTAATCATCATACTTTAATGAG GCGAAATTTTGCGAGGattattaaatttcgcgatttatcTTGCTTGCTTT AAATTTTAAGATTCTGCGGGAATCTGGGGAATTAAATGCGCAGATGGTAC TATTGGGTGTCAAGATTTTATAACTACAATTTTATTAAGGAAACCTTACA GTGTGAACGCGCCCTATACCTCCACGATTGACGGAAGAGCTGATGGAAGA GCACGAATAAGAGTAATCCcatcccagctgacacacaacgttgtttaaac gtttatctaacgttcacaacgtccacataacgttagattaacgttgaaac aacgttgtgtaccagctggtaCACTTAcgactttttcttttattcttctt ttcaCTCGTCAATAGTTTTCCttttttgttcttcttttaagattttgatt CCAATCTGACAAATGGAGTGAAAGCATATGCTTTTATACTATTTTGAAAG GTCGAAAAAAGgtcaaaacaaataattttaaaataaacaaaatatttact tATATTTTTGTTGTTTACCCGTACCAGGTTAAAAACGTCATAGAATATTG GTTTTGGCTTTGAGCTGATGGTTCTCAGAAAACCTCTTAATTTTGTGCCT AACTGCacgctgtttttttcatttcataatggatattcttaactttttag ggaaaatcctgaaatattcttgaTGTGTATTCTAAGTTTAGGATCCAACC CAACCTAAATCTagcatgtaatacatacctcACGCGAAGATATGACATTT ATTTTGTGAAGGCTTTTAGCATTGCTCGaggataattggcaatttaaagg taaaatgctctaaaaattggattttttttattcagttgccaaattccatg atagtgttattcttagcatattcttaattttttggccaatgtcat Run BLAST on NCBI transcript from alignment at sc0000205:250442..257010+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015195 ID=TCONS_00015195|Name=TCONS_00015195|organism=Clytia hemisphaerica|type=transcript|length=6569bp|location=Sequence derived from alignment at sc0000205:250442..257010+ (Clytia hemisphaerica) caattttgacgactttttattttggttgccatagtaaccaatgacgtcag
tttccatggcaacgggtggtcacacccggccccacctctcaaattttgat
cttctacattcaaggaacattattcaatcataaaatccctttgcacaagc
tgctgcacacgggaagctttttcgcgacatagtggcccctactaTTAATT
CTTTTTGCTTACAGGGGAAAATATCATATTCTGTTATAAAAGTAAATGCT
AAATGCAAGTATTTTTCAAAGAGATTAAGCTTTTCTGTTAAGGAATTTAT
AATGGCTACCAAGGTAGACCCAGAAGAAGCTATTGTACCAATAAACTCTG
AAATCCATCGCAATAATTATCACCATACAGTTCAAAATGACAACTGTAGT
AATCAGACAAACAATGGTAAAGTGGCTGAAGGTTTATCAAACAAAGGTTT
TAGCTTGAATGCGGAAACAGAGAAACAAGGATCGCTGCAGGATGAAAGTT
TAAAAGATGGTTGTAACAGTAACGATGCGGATTATGATAACTGTGATAAT
CAGCTCCAAGGAGATATTATATTTTGTCCAACAAATGCTGAATTAGATAA
ACATAACTTGGTTGATAAAAGCGATGTTCCGAATCACAAACCATCTGAAC
AAAACACAATCAAAAATAATAGTAAGACTACCCAACAAAAAGAGCGCAAA
TCTTCAAATGATGTTATCACTGACCAAGTTGACGAAAAGAAACCATTGCT
ACAACCACCAACTTGCTCAGAAAATACAGGAGAAAGATTACCTACATGTA
GACTTATTATCACTTCAATGAAGCACGTTCTGTGGATTGGCCTTTCAGCT
CTACCAACTATAATTATTGTTTGTATGGCAGGTTTTGGTTATTCTCATTT
AAAATGGAcaagaaaaattctaaataatggAACTACAACAGACGATGGTG
GTATTAACTATTATTTTAACCGTTGGACTGTATTCtggtttgatgacgtc
atgagaACAGTAAGATTTAAATTGATTATTATGCATGAAAGATCTTATAT
CAGCTCCTACATGAAGTAATTTGAATTTTGACATCAaatgaatattttga
atatctttcaaaatattttatcaatccTTTATTATAATCAATCAAATTAA
ATTCATCTACTTAGTTTTCATTATCTtcatatttctatttctatttcgaT
TTCAGTTCCTGATTACTCTATTGAATGTTATCGTGGCATGTGTATTATAC
AATCTAAGCATGCGTCAAACATTATACCTTATTGCAAGTGTGGCACTACC
TATCACTTTGACTGGctcattttgtttttattgtatgttGGAATGGTATA
CTTCAGATCCTTATGCTGTGTGGTTTTACTATATAGACATTGTCATTTTC
ATGATGGCGTTCTNTTAACCGTTGGACTGTATTCtggtttgatgacgtca
tgagaACAGTAAGATTTAAATTGATTATTATGCATGAAAGATCTTATATC
AGCTCCTACATGAAGTAATTTGAATTTTGACATCAAATGaatattttgtg
tttaaattttttcaaatatctttcaaaatattttatcaatctTTTATTAT
AATCAATCAAATTAAATTCATCTACTTAGTTTTCATTATCttaatatttc
tatttctatttcgaTTTCAGTTCCTGATTACTCTATTGAATGTTATCGTT
GCATGTGTATTATACAACCTAAGTATGCGTAAAACATTATACCTTATTGT
AAGTGTGGCACTACCTATCACTTTGACTGGctcgttttgtttttattgta
tgttGCAATGGTATACTTCAGATCCTTATGCTGTGTGGTTTTACTACATA
GACATTGTCATTTTCATGATGGCGTTCTTCCTGGTTGTACCATTGGCTCA
ATTACTAGCAGCAAAACAAGTGGGCGCAAAACTTTTAGAGGTAAGGTAGG
AAATTACAATGGTTATACTGAAGGTACTCAAAATTAATGACGTGGAGATC
GCTTCTTTTGTTATAATCCCTTTTATGGGAATGATTGCTCTTAGTTTTCG
AAATCTTAATATTTCTGGGTTATATACCAGAACAATTTTTGAGTACCTTC
TGTACCGCCATTGAGTTTTATATCAGTTAAGCCAGCTTATTTTTTAATTC
GCAACTAATCGATAATcactttatttattattttacttCTTCTTAGCCAC
TTATATTACAACAGTTGAAGTCGTCTATAAAAGCCTCTGTAATGAAAGTT
CCTTTTGCTTGAAAAACTCAAGTTTCGAATCAAATGAAAAgtaaatttct
aaattatttGGTGCAATCTCTTTTAAGCTCATCCATCGACATGTGAGTAA
TCTCAAAATCATACCGACTTCGTATCACGTGACTATGTAATAGGCTGAGA
AGACTATGACTATGTTATAGACTGAGAAGCTCCAAACGAACAAAAATAGA
TTCATGATACTTTCTTGGTATAATTTTGATAGTGTTgcaatttttccttc
tttagGGCAAAAACTTGTTCAATTAAAATACAAATACACAAATACAGGCA
CATTGCTATTACGAGGAATGTTCTGGCAAATAACCCACTAAGCTAATTAT
GTCTGAAAACCAGAAAATTCCATAAGAAGAAATCTTACtaaaaattatat
caataaaAATAGAATTCAATTATCAAAACAATTCTCACTTGGAAATTTGT
TTATATTCTAATCTATAATTTCCTGTATACATTTTCAGGCGACCAAGCTC
TACATTTTACCAATGTTTTTGATGGCCCTTGGGATAGCATTTGTGGATAT
TTATTTCTCAAAGAGTTATCGTGTTGAGGAAGATGGATCACTTTTGAAAT
ACAGTCAACGACTTATTGTGTATCCAGTTCTAATGGACAGCTTTTTGAGT
AAGCCAACCTCTTACTTTCTTGAAAATCAGAAACTTTATATCTTTATCTT
CTTTGGAATGAATTTATCGTTCAGTAGAATTCGGTATATTTTAGGAAATG
TGTTGTCTGAACATAGTCAGAACCTAATAATGGAGGGTTATGCTTCAGTC
AAAATATAGACTATTGGCGAACAGATTTGGTTGGAATTTGTCAACAAAAT
GGCAATATAAATTGGTACTTAAGGGCCTACACTTATGAGATAGAACAGGG
AGGGTGCGATATAAATTTTGGGTTGAGACCTTCCTGTACACTTTGACGAG
ATTTATTATCAATTTAAAATGGATTTTTTGAATACTTATCAAATACTTCT
ACCGCAGGTCTTGGTGAATTCTTTGTCAGGAGATTGGAAGGTACAACCGT
TCGTGGTGAAGCTCATTCATTGTATCTTATTCAAGTTCGCTTCGGAATCC
TTGGAAGATACATGAATCTGACTGCAGGTATTCCTCATGAAAATATTATT
CATTTTTTAGTTATTTGTGAAATGGCTTATTTCTAAACAGCtcattccaa
attttgaaatttgctttATGCTTATCGCACTAAATGACTGGCGGTGTACT
CTGAGGAAAAAAAAAGTTCATTGCAAGTATCTGTTGATAAAGAATTAAAG
GCAAATGTCTGAAattaaaaatctattgttcttttttgcgATGGAATAAA
GAATaatcagtatataaaataatcAATAATGTATCACTTATTTATTTTGG
CCCTATCGCAAATATAAGAATAGAGGTCTGACTTGTGTCtggatttgttt
tttttgtgctaATCAAATCCGcgacgaattttttttcatccatCGCTTTA
ATTAATATCGGCGAATAGCAAATATCCTTaaaacatttatttattttagc
ggGGACTTATTATGGAGATTTGacgattattttttattttttgtgagaac
taatttttttctaattattttcattttagggaATTTAACCATGCTGACCA
TAACATGTAGCCTGGTCATGCTCAAAGATGTTGTATTGCACAGAATGGGT
CGAATACAATGTTGGATGTTCTATAAAATCCGTCGGTTTTTTAAACGTGA
GCAAAGTTCAACTGAAGAATTTCGTGCATGGTATTTTGAGGAACGTTTCT
GTAATTTTCGTGCTTGTGTTTTGAACAATGACTTGTTACATGAGTTCACA
GGTAGGGATAATTAtaatactcttaggtgccaaataaacgggccccccgc
ttgttaatttttcgatttttttccaccccccccggacgttattaggaccc
ccccggaccttatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccgtttattcgaacc
cccccctcCGGACACAATATGTCTTTCACaaaatctttccttttttgCTA
TTAGACTATAGCAATGGCAGATGCTTTTATTCGTTTTAGTTTACTTATAC
TACTCGCCTTTTTTGTACCAAGGGAGTTAAtgtttttaaacctttttcat
TTCAGCCACCATTGTGACGCCCATTCTCTTAGTTTTCTTCCGCCCTCACC
GCCTCTTATTCCGCTTTGATGACGATCTCTTCATCAACACTAAATCGGGA
TTATTCGAACCGGGATTATTCTACGCCCAGTTTTTCATCCAAATCGGATT
TCTATTCATCACATACGTTTTTATAGTATTTATTGAAGGACGTTTTAATG
GAGTGCATCTCCGCTATGCTTTCGCTCAACGCAATCTGCTTCAAGAAATA
TCCCAGATTGTTATTTATTTGTGGGGCATGTTGCAGATTTTATCGGCTGT
TCGCGTCATACCGAACTACTTTCAGTGCGACACATCGAACATTTGTAGCT
GTCATTTCAATATCAATAAAACTGAGTATGGATGTTGATTGTGAGTGCTT
ACGTAATCATCATACTTTAATGAGGCGAAATTTTGCGAGGattattaaat
ttcgcgatttatcTTGCTTGCTTTAAATTTTAAGATTCTGCGGGAATCTG
GGGAATTAAATGCGCAGATGGTACTATTGGGTGTCAAGATTTTATAACTA
CAATTTTATTAAGGAAACCTTACAGTGTGAACGCGCCCTATACCTCCACG
ATTGACGGAAGAGCTGATGGAAGAGCACGAATAAGAGTAATCCcatccca
gctgacacacaacgttgtttaaacgtttatctaacgttcacaacgtccac
ataacgttagattaacgttgaaacaacgttgtgtaccagctggtaCACTT
AcgactttttcttttattcttcttttcaCTCGTCAATAGTTTTCCttttt
tgttcttcttttaagattttgattCCAATCTGACAAATGGAGTGAAAGCA
TATGCTTTTATACTATTTTGAAAGGTCGAAAAAAGgtcaaaacaaataat
tttaaaataaacaaaatatttacttATATTTTTGTTGTTTACCCGTACCA
GGTTAAAAACGTCATAGAATATTGGTTTTGGCTTTGAGCTGATGGTTCTC
AGAAAACCTCTTAATTTTGTGCCTAACTGCacgctgtttttttcatttca
taatggatattcttaactttttagggaaaatcctgaaatattcttgaTGT
GTATTCTAAGTTTAGGATCCAACCCAACCTAAATCTagcatgtaatacat
acctcACGCGAAGATATGACATTTATTTTGTGAAGGCTTTTAGCATTGCT
CGAGGATAATTNAAAATGTGCTTTATTTTGTGAAGGCTTTTAGCATTGCT
CGaggataattggcaatttaaaggtaaaatgctctaaaaattggattttt
tttattcagttgccaaattccatgatagtgttattcttagcatattctta
attttttggccaatgtcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00015195-exon-sc0000205-1491911889:250442..251450 | TCONS_00015195-exon-sc0000205-1491911889:250442..251450 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1510915933:250442..251450 | TCONS_00015195-exon-sc0000205-1510915933:250442..251450 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1575043694:250442..251450 | TCONS_00015195-exon-sc0000205-1575043694:250442..251450 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1491911889:252112..252381 | TCONS_00015195-exon-sc0000205-1491911889:252112..252381 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1510915933:252112..252381 | TCONS_00015195-exon-sc0000205-1510915933:252112..252381 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1575043694:252112..252381 | TCONS_00015195-exon-sc0000205-1575043694:252112..252381 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1491911889:253180..253339 | TCONS_00015195-exon-sc0000205-1491911889:253180..253339 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1510915933:253180..253339 | TCONS_00015195-exon-sc0000205-1510915933:253180..253339 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1575043694:253180..253339 | TCONS_00015195-exon-sc0000205-1575043694:253180..253339 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1491911889:253699..253818 | TCONS_00015195-exon-sc0000205-1491911889:253699..253818 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1510915933:253699..253818 | TCONS_00015195-exon-sc0000205-1510915933:253699..253818 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1575043694:253699..253818 | TCONS_00015195-exon-sc0000205-1575043694:253699..253818 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1491911889:254321..254542 | TCONS_00015195-exon-sc0000205-1491911889:254321..254542 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1510915933:254321..254542 | TCONS_00015195-exon-sc0000205-1510915933:254321..254542 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1575043694:254321..254542 | TCONS_00015195-exon-sc0000205-1575043694:254321..254542 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1491911889:255647..256826 | TCONS_00015195-exon-sc0000205-1491911889:255647..256826 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1510915933:255647..256826 | TCONS_00015195-exon-sc0000205-1510915933:255647..256826 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1575043694:255647..256826 | TCONS_00015195-exon-sc0000205-1575043694:255647..256826 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1491911889:256877..257010 | TCONS_00015195-exon-sc0000205-1491911889:256877..257010 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1510915933:256877..257010 | TCONS_00015195-exon-sc0000205-1510915933:256877..257010 | Clytia hemisphaerica | exon |
| TCONS_00015195-exon-sc0000205-1575043694:256877..257010 | TCONS_00015195-exon-sc0000205-1575043694:256877..257010 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000205 | supercontig | sc0000205:250442..257010 + |
Blast
The following BLAST results are available for this feature:
|