XLOC_008505 (gene) - C. hemisphaerica

Overview
NameXLOC_008505
Unique NameXLOC_008505
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000205:250442..257010+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_008505 ID=XLOC_008505|Name=XLOC_008505|organism=Clytia hemisphaerica|type=gene|length=6569bp|location=Sequence derived from alignment at sc0000205:250442..257010+ (Clytia hemisphaerica)
caattttgacgactttttattttggttgccatagtaaccaatgacgtcag tttccatggcaacgggtggtcacacccggccccacctctcaaattttgat cttctacattcaaggaacattattcaatcataaaatccctttgcacaagc tgctgcacacgggaagctttttcgcgacatagtggcccctactaTTAATT CTTTTTGCTTACAGGGGAAAATATCATATTCTGTTATAAAAGTAAATGCT AAATGCAAGTATTTTTCAAAGAGATTAAGCTTTTCTGTTAAGGAATTTAT AATGGCTACCAAGGTAGACCCAGAAGAAGCTATTGTACCAATAAACTCTG AAATCCATCGCAATAATTATCACCATACAGTTCAAAATGACAACTGTAGT AATCAGACAAACAATGGTAAAGTGGCTGAAGGTTTATCAAACAAAGGTTT TAGCTTGAATGCGGAAACAGAGAAACAAGGATCGCTGCAGGATGAAAGTT TAAAAGATGGTTGTAACAGTAACGATGCGGATTATGATAACTGTGATAAT CAGCTCCAAGGAGATATTATATTTTGTCCAACAAATGCTGAATTAGATAA ACATAACTTGGTTGATAAAAGCGATGTTCCGAATCACAAACCATCTGAAC AAAACACAATCAAAAATAATAGTAAGACTACCCAACAAAAAGAGCGCAAA TCTTCAAATGATGTTATCACTGACCAAGTTGACGAAAAGAAACCATTGCT ACAACCACCAACTTGCTCAGAAAATACAGGAGAAAGATTACCTACATGTA GACTTATTATCACTTCAATGAAGCACGTTCTGTGGATTGGCCTTTCAGCT CTACCAACTATAATTATTGTTTGTATGGCAGGTTTTGGTTATTCTCATTT AAAATGGAcaagaaaaattctaaataatggAACTACAACAGACGATGGTG GTATTAACTATTATTTTAACCGTTGGACTGTATTCtggtttgatgacgtc atgagaACAGTAAGATTTAAATTGATTATTATGCATGAAAGATCTTATAT CAGCTCCTACATGAAGTAATTTGAATTTTGACATCAaatgaatattttga atatctttcaaaatattttatcaatccTTTATTATAATCAATCAAATTAA ATTCATCTACTTAGTTTTCATTATCTtcatatttctatttctatttcgaT TTCAGTTCCTGATTACTCTATTGAATGTTATCGTGGCATGTGTATTATAC AATCTAAGCATGCGTCAAACATTATACCTTATTGCAAGTGTGGCACTACC TATCACTTTGACTGGctcattttgtttttattgtatgttGGAATGGTATA CTTCAGATCCTTATGCTGTGTGGTTTTACTATATAGACATTGTCATTTTC ATGATGGCGTTCTNTTAACCGTTGGACTGTATTCtggtttgatgacgtca tgagaACAGTAAGATTTAAATTGATTATTATGCATGAAAGATCTTATATC AGCTCCTACATGAAGTAATTTGAATTTTGACATCAAATGaatattttgtg tttaaattttttcaaatatctttcaaaatattttatcaatctTTTATTAT AATCAATCAAATTAAATTCATCTACTTAGTTTTCATTATCttaatatttc tatttctatttcgaTTTCAGTTCCTGATTACTCTATTGAATGTTATCGTT GCATGTGTATTATACAACCTAAGTATGCGTAAAACATTATACCTTATTGT AAGTGTGGCACTACCTATCACTTTGACTGGctcgttttgtttttattgta tgttGCAATGGTATACTTCAGATCCTTATGCTGTGTGGTTTTACTACATA GACATTGTCATTTTCATGATGGCGTTCTTCCTGGTTGTACCATTGGCTCA ATTACTAGCAGCAAAACAAGTGGGCGCAAAACTTTTAGAGGTAAGGTAGG AAATTACAATGGTTATACTGAAGGTACTCAAAATTAATGACGTGGAGATC GCTTCTTTTGTTATAATCCCTTTTATGGGAATGATTGCTCTTAGTTTTCG AAATCTTAATATTTCTGGGTTATATACCAGAACAATTTTTGAGTACCTTC TGTACCGCCATTGAGTTTTATATCAGTTAAGCCAGCTTATTTTTTAATTC GCAACTAATCGATAATcactttatttattattttacttCTTCTTAGCCAC TTATATTACAACAGTTGAAGTCGTCTATAAAAGCCTCTGTAATGAAAGTT CCTTTTGCTTGAAAAACTCAAGTTTCGAATCAAATGAAAAgtaaatttct aaattatttGGTGCAATCTCTTTTAAGCTCATCCATCGACATGTGAGTAA TCTCAAAATCATACCGACTTCGTATCACGTGACTATGTAATAGGCTGAGA AGACTATGACTATGTTATAGACTGAGAAGCTCCAAACGAACAAAAATAGA TTCATGATACTTTCTTGGTATAATTTTGATAGTGTTgcaatttttccttc tttagGGCAAAAACTTGTTCAATTAAAATACAAATACACAAATACAGGCA CATTGCTATTACGAGGAATGTTCTGGCAAATAACCCACTAAGCTAATTAT GTCTGAAAACCAGAAAATTCCATAAGAAGAAATCTTACtaaaaattatat caataaaAATAGAATTCAATTATCAAAACAATTCTCACTTGGAAATTTGT TTATATTCTAATCTATAATTTCCTGTATACATTTTCAGGCGACCAAGCTC TACATTTTACCAATGTTTTTGATGGCCCTTGGGATAGCATTTGTGGATAT TTATTTCTCAAAGAGTTATCGTGTTGAGGAAGATGGATCACTTTTGAAAT ACAGTCAACGACTTATTGTGTATCCAGTTCTAATGGACAGCTTTTTGAGT AAGCCAACCTCTTACTTTCTTGAAAATCAGAAACTTTATATCTTTATCTT CTTTGGAATGAATTTATCGTTCAGTAGAATTCGGTATATTTTAGGAAATG TGTTGTCTGAACATAGTCAGAACCTAATAATGGAGGGTTATGCTTCAGTC AAAATATAGACTATTGGCGAACAGATTTGGTTGGAATTTGTCAACAAAAT GGCAATATAAATTGGTACTTAAGGGCCTACACTTATGAGATAGAACAGGG AGGGTGCGATATAAATTTTGGGTTGAGACCTTCCTGTACACTTTGACGAG ATTTATTATCAATTTAAAATGGATTTTTTGAATACTTATCAAATACTTCT ACCGCAGGTCTTGGTGAATTCTTTGTCAGGAGATTGGAAGGTACAACCGT TCGTGGTGAAGCTCATTCATTGTATCTTATTCAAGTTCGCTTCGGAATCC TTGGAAGATACATGAATCTGACTGCAGGTATTCCTCATGAAAATATTATT CATTTTTTAGTTATTTGTGAAATGGCTTATTTCTAAACAGCtcattccaa attttgaaatttgctttATGCTTATCGCACTAAATGACTGGCGGTGTACT CTGAGGAAAAAAAAAGTTCATTGCAAGTATCTGTTGATAAAGAATTAAAG GCAAATGTCTGAAattaaaaatctattgttcttttttgcgATGGAATAAA GAATaatcagtatataaaataatcAATAATGTATCACTTATTTATTTTGG CCCTATCGCAAATATAAGAATAGAGGTCTGACTTGTGTCtggatttgttt tttttgtgctaATCAAATCCGcgacgaattttttttcatccatCGCTTTA ATTAATATCGGCGAATAGCAAATATCCTTaaaacatttatttattttagc ggGGACTTATTATGGAGATTTGacgattattttttattttttgtgagaac taatttttttctaattattttcattttagggaATTTAACCATGCTGACCA TAACATGTAGCCTGGTCATGCTCAAAGATGTTGTATTGCACAGAATGGGT CGAATACAATGTTGGATGTTCTATAAAATCCGTCGGTTTTTTAAACGTGA GCAAAGTTCAACTGAAGAATTTCGTGCATGGTATTTTGAGGAACGTTTCT GTAATTTTCGTGCTTGTGTTTTGAACAATGACTTGTTACATGAGTTCACA GGTAGGGATAATTAtaatactcttaggtgccaaataaacgggccccccgc ttgttaatttttcgatttttttccaccccccccggacgttattaggaccc ccccggaccttatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccgtttattcgaacc cccccctcCGGACACAATATGTCTTTCACaaaatctttccttttttgCTA TTAGACTATAGCAATGGCAGATGCTTTTATTCGTTTTAGTTTACTTATAC TACTCGCCTTTTTTGTACCAAGGGAGTTAAtgtttttaaacctttttcat TTCAGCCACCATTGTGACGCCCATTCTCTTAGTTTTCTTCCGCCCTCACC GCCTCTTATTCCGCTTTGATGACGATCTCTTCATCAACACTAAATCGGGA TTATTCGAACCGGGATTATTCTACGCCCAGTTTTTCATCCAAATCGGATT TCTATTCATCACATACGTTTTTATAGTATTTATTGAAGGACGTTTTAATG GAGTGCATCTCCGCTATGCTTTCGCTCAACGCAATCTGCTTCAAGAAATA TCCCAGATTGTTATTTATTTGTGGGGCATGTTGCAGATTTTATCGGCTGT TCGCGTCATACCGAACTACTTTCAGTGCGACACATCGAACATTTGTAGCT GTCATTTCAATATCAATAAAACTGAGTATGGATGTTGATTGTGAGTGCTT ACGTAATCATCATACTTTAATGAGGCGAAATTTTGCGAGGattattaaat ttcgcgatttatcTTGCTTGCTTTAAATTTTAAGATTCTGCGGGAATCTG GGGAATTAAATGCGCAGATGGTACTATTGGGTGTCAAGATTTTATAACTA CAATTTTATTAAGGAAACCTTACAGTGTGAACGCGCCCTATACCTCCACG ATTGACGGAAGAGCTGATGGAAGAGCACGAATAAGAGTAATCCcatccca gctgacacacaacgttgtttaaacgtttatctaacgttcacaacgtccac ataacgttagattaacgttgaaacaacgttgtgtaccagctggtaCACTT AcgactttttcttttattcttcttttcaCTCGTCAATAGTTTTCCttttt tgttcttcttttaagattttgattCCAATCTGACAAATGGAGTGAAAGCA TATGCTTTTATACTATTTTGAAAGGTCGAAAAAAGgtcaaaacaaataat tttaaaataaacaaaatatttacttATATTTTTGTTGTTTACCCGTACCA GGTTAAAAACGTCATAGAATATTGGTTTTGGCTTTGAGCTGATGGTTCTC AGAAAACCTCTTAATTTTGTGCCTAACTGCacgctgtttttttcatttca taatggatattcttaactttttagggaaaatcctgaaatattcttgaTGT GTATTCTAAGTTTAGGATCCAACCCAACCTAAATCTagcatgtaatacat acctcACGCGAAGATATGACATTTATTTTGTGAAGGCTTTTAGCATTGCT CGAGGATAATTNAAAATGTGCTTTATTTTGTGAAGGCTTTTAGCATTGCT CGaggataattggcaatttaaaggtaaaatgctctaaaaattggattttt tttattcagttgccaaattccatgatagtgttattcttagcatattctta attttttggccaatgtcat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00015193TCONS_00015193Clytia hemisphaericatranscript
TCONS_00015194TCONS_00015194Clytia hemisphaericatranscript
TCONS_00015195TCONS_00015195Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00015193-proteinTCONS_00015193-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205supercontigsc0000205:250442..257010 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.7 4.13 9.79 11.16 0.97 0.88 2.05 2.13 1.35 1.34 1.79 1.02 2.58 2.67 2.73 2.82 1.65 1.4 1.78 2.29 1.34 1.45 3.69 4.48 1.99 2.48 0.73 0.54 1.93 2.2