TCONS_00015178 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015178
Unique NameTCONS_00015178
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length507

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015178 ID=TCONS_00015178|Name=TCONS_00015178|organism=Clytia hemisphaerica|type=transcript|length=507bp
CACGTATGCTGGAAATCATGCAAaTTACTGTCAACCACCAAGTTGCTACA
AAAGATTCCCTCCTTACGCCAATCAATTATGTTTTAATCTCCATGGTCAT
CGAAGAGCCGTCGGTTATTACCGTTATCCATTCAGCCCGCATCTTTTCTT
CTACTGCAACAAATTCGGTGTGAACTCCGGAACTCAACAATGTCCAGCTG
GTCTTTGGTTCTCTGAAAAATGCGTTCAGTGCTTGAAGCCTTATGATGCC
GTCAACAATGTTTGCAGTAAGAGCTCTGGCGATGGTAGTGGACAATCAAC
AAACACTGATGCCAACTGTGCACCAGAAGGATTCTGCAAACAACACTCCA
TCAAGCACAAACCATTGACCTTCCTCTTTGCCGTGGAAGGAGACGCCTCG
TCATTTTTCTCATGCAATCAACTCAAAGAAGCAACACAATGTTTATCTTG
CCCTGCTGGTCTTGTCTTTAACGAAGTTTGTCAAGGATGTCGACAATTCA
AAACTAG
Run BLAST on NCBI

transcript from alignment at sc0000205:109444..129737+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015178 ID=TCONS_00015178|Name=TCONS_00015178|organism=Clytia hemisphaerica|type=transcript|length=20294bp|location=Sequence derived from alignment at sc0000205:109444..129737+ (Clytia hemisphaerica)
CACGTATGCTGGAAATCATGCAAGTAAGTAAAATTTACTTTACCTCCAac
aattcgaacctctataagtCGAttgtctccataattcgaacttcttcaac
tcgaacaaattttttagattttttataaaGTTGTTTGTATTCTAAAACTC
GAACACATTTTATTCCTCACTGTTCGTGTTCGACTTATGGAGACATCACC
GTATCTCGCGGTCTTTGTTTAACGATatacttttaatttttgataGTTAA
TAAGTCATGTCCAAGTCTAAGAATATTTTACTCAATATCTTAAGAACTCA
TTTTCAGAATAAGAATATCTTTGAGAATATACGGTGTGTATGAAAATAAA
CCTCTggtgttttgatagatttttcAGTTTTACGAGTTGCGACTATCCTC
TACACGCTTGGAAAGTCTGCGTAATTGAATCTAATTGGTTCCTTTCAATT
TTAGAGAATTAAACTTCATCATAAAGAATTtatcttttcttcattttcac
agATTACTGTCGACCACCAAGTTGCTACAAAAGATTCCCTCGtaagtaaa
aaaagtaaattccTCGAAATGCAAAAACCAGTATGTTAAAACTGAACCTC
AGGCTTCAGTTCTTAATTTTTCCAGCCTTTATTgttctaaacatgttctt
aatattctTACCTTTTTTACTAATTGGGTAAAAATCATGTCATTTCTGAA
ATTTGAAGcccagattgttcttaatttgttcttaaattttggagaaaaaa
aattctgcctgaagtttatgtaatttttttatttcatttgaatTGTGTTA
AAGTCTCAATATAGAAATAGTCTTGATATTATATTATTCTATTATTATAT
CATTCACAGCTTTCGCCAATCAATTATGTTTTAATCTCCATGGTCATCGA
AGAGCCGTCGGTTATTACCGTTATCCATTCAGCCCACATCTTTTCTTCTA
CTGCAACAAATTCGGTGTGAACTCCGGAACTCAACAATGTCCGGCTGGTC
TTTGGTTCTCTGAAAAATGTGTTCAGTGCTTGAAGCCTTATGATGGTAAG
ACGAAGTTATGTTATGtgtacttttattttttgtcCCAATTCCGGTAAAA
TAACGTCTGACTTTCGTGTAATACATATGAATAACTTATCCCAGCCTTCC
GCAATTCTAAAATCCATTTTACTACCATATGAAAACCATGTCGTTGAATT
TAGAATTATTCCCTGAAGAATGGTTTCCACATCGTAATAAAAACCGGTCA
ACACTTAAAGTGTATGGACTTCGAACCTCAATAAGATGCAtggatagaaa
ttttatgaTCATGGAGTATATTGGAGTATGTATATTCTCTTTCAGCCGTT
AACAATGTTTGCAGTAAAAGCTCTGGCGATGGTAGTGGACAATCAACAAA
CACTGATGCAAACTGTAAGTCACCTTCTTTATCCCATATAAATATCtaac
tttgaaaaaagtttagCCTCATAACTTTAGAATAACGCACatttctttga
atttgttttttgtgCCATCAAATTTCNACTTCGGAATAACGCACATTTCT
TTACATTTATTTTTTGTGCCGCCAAATTTTGATCTGAGATTGGATTTAGA
TGATTTTGCATTTTCACCAAGAGTATATGTTGATTCATCCTTTTACAAAT
TGGAGGGGGAACACAAAAGAAACTTCAGAATAATATCTATCCCAAACAAA
GGTCTCTCGTCCATCAAATCTAGACAAAGTTATAGGATATGCTATCCAAT
ATAATTTTCTGAGTAGACCCTGCTTTCCCTCgcaaactacaatcatggac
aaaaatgtttgagaaaaacacaggagtttgcagtaaaaatgtagaaaaag
aattatTCGTTCTTTCAGAGATAATATGTAGAATACCAATATTATTTCCT
CCCTttcgttgtttcaacgttcatctaacgttatatggacgttgtgaacg
ttagatagacGATGAAACAATATTATTTCCTCCCTTCTCCAGGTGCACCA
GAAGGATTCTGTAAACACAAAGCTGATGGATTATACGCATTAAATTCATA
TTCTCCAAAATTCTTCTCTTGTGTCCAATGGAGAGCCACTCAATGTCAAT
CGTGTCCAGCTGGTCTTTATTTCAGCCAGAAATGTCAAGTCTGTTTGGAA
GAAGTACACCTTTGTAAGTTTTTCATAAAGCATTCTTCTATTTCTCCGAA
GCAAATCTATTTAGTAAATTCTCCGAGGAAACTCTTAAGAGTAAAATTTC
AACTTAATGCTATTAATGACGCCCTatatttttatgattctgtttaAACT
GCTTACTAAAGGTTTTTGTGTCTAATTTATTTGTGAATTTTGCTTGACTT
CGCTAAAGATTTCAATGTCGGTCGACAGTGTGAATGTAAAAGCGTCCGTA
AAATTTCATCTCAAATTGAGAACTCGTTGTagtaatttctttttgaaatc
taatcagtctttctttttttctttcaatcatAAAAAGCTACTTGCCCACC
AAGAGGAGACAACTCACCAGCCTCTAAACCACCAAAATGTAAGTTTCTAG
ACTTTTTCCAAAGGCTAGATGTTTTCTTCTCTtcaatccaaaaaaattca
CCTACTATGCCTTACCAGTAAGGAAAGTTGGGGTTGAATCCAACAATGTA
CCCCACAATCTGTGACttatttgaattaaaattttgtcGAAGGAAATCAA
ATTCACCAATCAGACTTCTTCAgatatatttgtatttttgtgtAAGTTTC
TATTTAAATCACTCTTAAATGGAACTGGGTAATCGAGTCTGACTATGAAA
AGTTTTCCCTCAAATCCCTCTCTCAAGTGGAACTTGATTATTATTCTACA
GATATATTTTCTCAATACTACCGAGTATTAAGCAACCTCTATAAGAAACA
CGTTTCACTAGAAGATGAACAGAAGCTTAACTTTTTCCCTTAATATCTCA
TATCACACTTTTCTTTCTACGTTGACAGGTGCTAGCAACGATTTGTGTGC
ATGGAAAACAGCCGGATATTACGCTTTTAGTGAAAACGCAAACCTCTTTT
TTTACTGTAACGAAAACTACCAAAATGTTGGATGTCAGAGATGTCCAGCC
AACTTGGTTTACAATCAAGCATGCGCTCAATGCTTACCCAAAGACCAACA
AAAGTGTGATGTACCATCTAAACCATCCGAACCAGCCGAAACTAATTTCT
GTAAGTATCTAAACtaataatgattttttgtttctttaaaatatctttcc
aatagcaaaaactggttttgaaGTGCCAAGAAACCGAATACAGAGGGATA
AACTAAAATCCCATTTATACTACTTATAAAGCAATAAAAGCCTCATTTTG
AGCTATTGCAGCTCTATAATATTTATAATATTTAGGACGCACTCTGTCGG
ATAGAAAGCCATTTTTACTGATAAAGTGAACGAACTTTGCTAACGATATC
ACTTTATTCACTGTAGGTGAATTAGACAGGTCTTAATTTTTCTGTACACA
ATATTTATGCCTCTAATTTggacctctattattcgaatctctctgtaatt
cgaactaaaatatagGTCCCCGAAAAGCCGTTTAAAATACTGTCTGTAAT
TTGAAACTTTCTCTAATCCGAATTAAATTCTTGGTCTCTTGAATATCGAA
TTAGGCAAAGTCAACTCATAGTACAAGGTAACAGGAATAGTCGAAAATAT
TTCCACATTCAAAGCAAACACGTGTCTCCTTTTAATAACAAAGGAACAAA
TTCTAATGATCTCATTTCATTCTATTTAAAGGTGCACCAGAAAGATTCTG
TAAACAACACTCCATCAAGCACAAACCATTGACCTTCCTCTTTGCCGTGG
AAGGAGACGCCTCATCATTTTTCTCATGCAATCAACTCAAAGAAGCAACA
CAATGTTTATCTTGCCCTGCTGGTCTTGTCTTTAACGAAGTTTGCCAAGG
ATGTCGACAATTCAAAACTAGTAAGTGTGAACAGGGCCTTATATGAATGG
TGAAGAATCAGCCAGGCTAAACAGTGCCTTAGTTGAAAGAATCAACCAAT
TTTTAGGCTAAACAGTGGACTCAAATTCGAACATCCGTATAATATGAATT
AGACTTCCCCTTGAAGATTGAATTAGTGAGAATAACCTTGTATGAAACCT
TTTAGCGGatataagcaaagaaaaagCAATTTTAAGGGCCACGCTTTCTA
CTCAAATAAGAGTGTTCCATTGAATCCTTAGCTCATCTTTGTTAGCCTAT
GNTTAGACTTCCCTTTGAAGATTGAATTAGTGAGAATAACCTTGTATGAA
ACCTTTTAGCGGatataagcaaagaaaaagCAATTTTAAGGGCTACGCTT
TCTACTCAAAGAAGGGTGTTCCATTGAATCCTTAGCTCATCTTTGTTAAC
CTATTTGTATTTTGTGCTTATCAGAAACTAAAGCTCTATCTACATTTCAC
AATAGGCGATGCTAAACAATGCAATGCAGTCAAGCCAGATGATGGAAAAC
CAAAAACCGATGAGGAACTCAATAAATTCAGATGTAAGTTTCTattcaaa
tcattcttaaaTGGAACTGGGTAATCGAGTCTGACTAGGAAAAGTTTTCA
CTCAAGTCCCTCTCTCAAGTGGAACTTGATTATCGAGTCTGACTCTAAAA
AACCAGCTCCAAATGTATGGGATTGAACTGGGAAAGCGACCGGTCGTTGT
GAACGtcagataaacgtcgaaaaaacgttgtgtgccagctgggaaaaaGT
GTCCAGCCATTCATTAACGTGAAATTGAATTCTAAGATGTCTTcgatatc
aaaatattttgtaagTCTTACATGTATTAAATTCTTATTTTGTCTCAATT
CAGGCCCAGACTTCTTCTGTCAAAACCGACCTGTTGGAAACCACGAAACC
GGTGCCGGTGAAGAGACCTTCATTACTTGTTCCCCTGGTAACCAATGTAT
CAAAAGATGGTGCCCATCAGGAACTGTTTACAGCAAAGCCTGTGATGCTT
GTACTTACAGCTATATCAATTTTGGTAagtgatgtttttcttttcaaatt
cttgAGTGCTATAAGTACAGTGAAgttgaacctctataactcgaacgtct
ccttaagccgaacaagttttatggtctcttaagttaacaatgccttataa
accttacccCAACTGTATTAGGCTTTTTTGAGACTTATAAACCTAAACCA
TGCAAATCAAGTTTTTTGAGGTTACAAATAGCAAAATCATCATCTTCGCC
CTCATTCCCTTTTTAACGCCCACGATGCGCCTTGGCTTTAGTAGACGCTT
TTATACACATAACAACTCTTGACTATCAAATAACCGTCTATGACGCTACA
CTAAATGCTCATCTTACGCTTACTACGATCGCTTGGAAAAGTTCTAAATT
CtctcttctttatttttagCTAATCAGAAGCTATGTAAACCAACAACTGC
ACCATCATTCCAAGCAGCAAAATGCAGTAagtaaaacatttgaaaatctt
tttgatgagGCATTTCTGTTGTGTAGAGTTAtagaaaaataacgaagatt
TTCAAGTTTCCTCCAGtacctcaaaatattttggatCATTGCACCACTTT
TTGAAGTGAAGAACGAAAATGAAGCCATTTTATTGGTGAGAGTTGACGTG
AAtcttgaatttaaccaatagaatggattcatttcgtttcggagcgaaac
agaAACGTAGTGTGTGAGTGTGGTCTTAAAATCTGGAATTTAGAAATAGT
AAATACCGGTAATTTCTTCATGCAAAACCGGCGTACCGgccaaaaattac
gaaaatgtcGAAAATGTTCCGACGAGTACTAGAATACCGAATATTCAGTN
ATAATAAATCTTGTTCTTTTTCATATTAGGAGATGAAGATTTCTGTAAAA
AAGGAGGAAAGCCCGGCCCCAACCAACCTCCATCTCACTTTTACGAGCAA
CCTTACGTTTTCTACGAATGTGCCGCAAAAGTGTGTTACCGTAAAGCATG
TCAAACCACCCTCGTTTACAATGACAACATTAAAGGATGTGATTACGCCC
CAAACCCGAAATCAACATGCAGTAAGTGTTTTGTTGATGTTAAAAATTTG
AAGCcgtttttcaaagtttaaaatttaaaaacagttAAGCAATATATTTC
GGTGGTATCACCATTCTCAAGCTTATAAAAATACAAGTGTTCTGTTTTGT
TGATGCTATTTAGATTCAAGCCAAGTCTTTTAGAGAGGAATCTTCCACCT
TTTTTAGGCAAGCAAAAGTGATTTCTTTAAGATTTGCGCCCTACTTCGGA
TGAAAGATTGAATGAAgcgttttttttgttgtttttttttccgtCTGTCA
CCTCTTTCGGCCTCTAATTGTTACTTTCGATCCTGCGTTTGTATGTAGAA
CACTATTTATGTATAAAATAATTGGTTTCAAATTTTACAGAGGAGATTTG
ACTCTAGCCCTAGGCTATGTGTCAGAGTTATGGAAAcataataatataat
attattACATAATATTTTCTAATTCTCATCTCTTATTTGTAGAAGTTACT
GGTTTCTGTAACGGATTAGCTAATGGAGGATATGCACCACCAAAAGCAGC
TCATGAAGGAAATAACGTTTGGTATCAATGTTTCACGCATCCCACCCACG
TGGAATGTGTCCGTAACACGTGCCCAGGAGAACAAGTTTATCAAGCGTTT
AACAACCAATGTGTTGCGCCATCATATTATAATTATCATTGGTAAATAAT
ATTCtcagacataattttttttccggacatGATTTAATgtcattaaaatg
aaatttgaacgACGGaattaatttttatataaatctttacgatttttttt
ttttttaataaaatgaattttaatgaattttgattAGATTTTTTCCCAAT
TCCCTATGCTGTACGTACATAAATTCTTTCTggaatttttccttaaaaat
gagaGACTTTATAATTTCGTTTATGACCTGGACTGActgaatttacattt
ttttagaaattgttccaataaagccttttgtatatttttttttcttgaaa
ttttgctgacaatcaatttttttacttttcaatttagagtttatattttt
ttctgtatttaaaaaaattttgaagcaaacACAATTTTAGTCGTTGCTTG
TTATTTTCCACTCTTCTATCCCAAAAATGTCTATACTTTTCTAAACATTG
CTCGTGAATGaaaacaagagccacaaagatgtgNTTCTAAGACTCATCtg
agtaagaaagtgccaaaatatcttgagactgtctactaagggactaatat
ggaaatatggcaaTATGAATTTGGGAGATATCGAATTAAGTTGTACACAt
tagtttcatatgaaaaacttccttgtcatcaatattttaaaccacCATAT
TATACCATCCACAagtaaaaagttacttaaaaatgGATCTCCTTCTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNgaggaacgtacaataaggtacactgg
gaacgtacaataagttcacggggaacatacaataaggtatactgggaacg
tacagtaaggttcacggggaacatacaataaggttcacggggaacataca
ataaggtatactgggaacatacaataaggtacgctggtaacatacaataa
ggtagacgggaacataaaataaggttcacggggaacgcacaataaggtac
acagggaacctacagggaacctacaataaggtatatacacagggaacata
caataaggtacgctggtaacatacaataaggtagacgggaacataaaata
aggttcacggggaacgcacaataaggtacacagggGACCTACAGGGAACc
tacaataaggtatatacacagggaacatacaataaggtactggggaacgt
acaataaggtacatggggtacgtacaataatgtaTACGGGAAACGGCACA
ATAAGATACACTGGAacaacgtacaataaggtacacgggtaGCCTgagaa
tccaagcgttaaacttttttcacagtctagtttatgatatttttgctgct
ggtttaacgcttggtgcaggtaacNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCGCGacgatttttagtcacgtgactga
agagcctagtcataatgtgcagcacgaataaagaaaacattaacatcgaa
aatggacgaagaaaagacggaaaaaaggccgttttaacaaatattcccct
atagtagggaaatatttaaaaaaaaatttctaaaaatgataTCTCGTTGG
GAAGATATTTTGAGCGGCTTGATGTAAGCTTTTGTAGAatttacttatat
ttgaaaatgaaaatgaaaaatgaataaggaaaaagtgattttttctaAAC
GGCtaataatttttattatatgATCTTAGGTCCCAAAAATGTCCTTGCAT
TgttgaaagtttatttttgctaaaagtgATCTCCTTGTACCTTCTTCAAA
TGtgtattcagattttttaattctttatgaCCAAGTAACTCCGAAAAGGG
ATCTCCTTTTGTATAATACTGCTTTTCTAGGGTAGCAAAAACCTTCTTGT
TTTTCCGTAATGATCCTAGATGTTAACTAAACCGGTATTCACAATAGGCT
AAGACACAAATGACTTTGTTTTCTGCgcttgaaagatttttttatatttt
acgaaatttttaagtttgccttgaaatagTTATTCAGTAATAATTTACCA
CCGGATTTGTCAGATTGAATCAAACTACTACAGTAGTGACACAGGAGGGG
TGCAAAGTTTGTGTAgtagagcagatttttatatgacactgtattttttt
ttttaattatgaatagataattaccgtgtcataaaaatctgctttcCTAC
ACAACTTTTGCGTCCCTCCTCTCTACGCTACTGTACTAGATGTTTGCTAT
CATATCAGCCTAACCTGATAAAACAactgttcataatttttttacgcgca
cggtaaacctctgaagccccactgaaaattgactTTATTTTTGTCCCCCT
TTTAAATTCAAAGATAAATTTGCACTCCAAAACAATCCCCAGTGGAATTT
TTTACCTGAGAACaattatccccattgggattttgaaagaaattttcatc
cccactgtagGAAGAAGTTTCCCCGAGCTTTGAGACGGGGGTGTTTTAGT
ACTCACATGATAAGTGGTAGTACTGCTTACATATGGAAATTTCAGAACTT
GTCGCTgtaactacaatcatggtcgaaatagaatgagaattcaggttatt
ttaacgtttttcaagatttaaagttctggcgagaaagtcgattttgggct
atctctttaactttaaatatttcaatttggaaggggttggcagacttcca
ggctatattctgagccttattggactatttttgaacttttggatcctgag
atcctaaggtcctaagtgttaagtctagtgttaaaactcagagttaaaac
tctacccttcaaacttactttagagcacttacaaatcgattgtggtttca
aaacttcccggtggatttcccttttttctcaaatattacgaccatgattg
taaaaTGATAAACTAGATACAATGGTAcatagcctgggtatccagactca
aaatttttgaaaaaaaccctTACTTCATCATACAAaacttctaaaatttt
agagtctggtgcaactaaagaagttgggtacagtttgtttgatactgcct
gcgagtgaacccttgttgacagactatcaaaactttgtaaacccaggcag
acacacataattaacttactataaaacctcttttacaaaactcaaaaaaa
ctttcaaaacttattAAACTACATCAAATcatcagccacattttataaag
gctcctttccagcggcaattttgtttagaaatgaacctgtgttttcattt
ttttcaatgtcaGCTTTTTCCCATGAATTATGCGtgcgcatcgaaaaata
tcgaaaatactgcgaaaattctgctcagtgactgggcgcgtactgatcAA
TTAGAGACAGTGCAGAggagttagttggaccagaccgtaaaccagagaca
agattacaaaaaactagacggtgaaatagtttacggtctggatatccagg
ctaaatgGTACATAGAGTGCTGGAAAGAGCTAAAATTATATGAAGGAGTT
TCgacttttcaaataattttcataTGTGGAACAAAGACCTATTATCTCCC
ATGACGAGAGCCAACCAAACCACAGACCGGGTGTTTCATGAATCAAAATG
TCTTTGTGTATTTGTGTGGTTTTATTGGAGATCCAAGGCAACAAAACGAC
TTTCAAAAACTAACAATTAATCATGGATccatatacaccttttcgaccgt
agtcgcgcgggcatttttttgtccgctttgtcacactaaaaccgtcccaa
tcctcttttgacgcatttttctattttctatttgtgcgaaaaaaagactg
gaacggttttagtgggataacgcggacaaaaaaatgcccgcgcgactacg
gtcgaaaaggtgtattgcaaTTTGCATAAATTCAATTACCTTAAAGCTTT
TAAAGCTGAAACGTTTTTTGTCATGCAGAATTTGCATTTTCTACCTTTTC
CTCGCGATTCTTCTCTGTTTTAAGCTATCATTAATCACGAAATTTGATAC
TCTTGTTGGTCACTTCAACTTCTGAAATCTttataaagtttacaaaagta
acTATAATTCGAACTACAATACTGGCCAAAAGTATGGTGAATTCACAAGT
TCCCTtcttcaccccccccccttatacAATGTTGAATTTCAGTCATACTT
GACTCAGCAACATTGTAGAGAGGGGGAAGGGGAAGAGGAGCAATAAAAAT
AGTAGAATTCTATTTACTTTTAGCCAGGATTGTAGTTCCAGGCCCCTATC
AATCAAAAATCCTCGTAAAATGCTCTTTAATCCAAACAAATAATATTCCC
TGTTCGTgatcgaattagcgagagtcaactgtaattcgatcttcaaaagg
ccaagaattttcttcgaataaaaagattcgaattataccAAAAGTGTAGT
TGAGTAAgggaatttcgagttatggagtaagatttataagacattgttaa
AATGAAGGGACCACAAAACTTGTTCGAGATAAGGAGACACTCGAGTTATA
GAGGGTTCGAGTTAAATAGACTCCACTGTGCCACAGACTCGCTGGGacct
cagccccactggaaaattaagcaaaaatttcgtctccggtgggaaattac
ccttgaatttcagcccctatggaaatgactttgatttcacccCCCTCGAA
ATTCCATGTACTTGCAAATTGTAAtccaaaaccatccctactggattttt
taaccttggaacaataaaatttctatccccattaggatttcaataggaat
ttttaaaaaattccaccgtGTCTCACACAGTGGTGTTAAGAGAGACCTCA
CTGTGTATATTCCCCGCCTTTACTATCTCTTTAACAGACGATAGCATTGT
CTACACACAAGGAAGTACAACAATCCTTAATCAGATTCTTTTCTCTCTCC
CACGAGCCTTAATGGCAAACAAGAAACCTCAAACAATTACATGACTTACA
AAAGCCACTACCTTCACTGATTTGCTTGTTGCTAAGCAACATAAAACACA
AGAATTTAGATTTGTTCGAAGTTCGAAGTTGTGCCAACTTATTCTTACCT
CCTATATTGCTTTGTCATGACTTAGAAAACTTCCCCTGCGCTGCGGAAAA
ATTTAATATACCATTTTTTAGCTCTTTTCATTAAGTTAATCGACATTTTC
CTTCATGAGACAGACAGACTGGGTACTTTATGAAGGTTTTTTTTGCCTAT
TCTCCACTACGGAGCAGAGCAGAACCCCCATTAGGATTGAacccccgggg
ggtactagcGTTGCGAGCTGATGGTTATGTGCCGCCCGACTAttgaccct
cggacccttagcgggactaaaaaggagaaaaaataggAAACGATTTTTAC
GACCTTTaatgggactaatttgaccaaactTGATCATTCAAGgagtaaaa
agtttaaatttcttatattttccCGACCCTTAGTtggactgaaatttaat
tttctggctTTTCTAACCCTTACAGGGACTTTCAGGTCCTAAAAATGGCA
CTCTTAAGGttggcacatacccgtacccttctcttgcctaagtaccatTA
GGATTGAACGAATGTATGTAGGAAGATATTAATCTTACTATAATTATACC
GAAGTCGTAGAAAGTTTTCGTCATtaggatttttcaaattcacttAGCCT
TCGAAATCAGACGAAAATTGCAgcgaaaatttagccaaatttgagtaaat
ttgggcgaaaGATCTACCATTATGTTGCAATTTCTTGAAGATTTTATACC
ATTCTGAGACTAAAAATGTATGGTAGGTCGTTTaacttgagtgccccccc
ccctcaaaagcaaaagattttcatcaatttcCCTTATTTCTCCCTCCTGG
ATTTCCCTCGATTTCTGCTAATTTCCAAACGAAAAAGATTTATAGGATTT
ATAAGATTTATACTTTATAGGAAGTTTAGCAGCCTCCAAATCACACTAAA
AATTTACCTCTCCCATGAAACCAAGGTGACAAAAATGCTAACATCTTACA
AACGATATCAATaatcgaaaattaaaaattaaaaatcagtcAATCACAAT
TTTGGGGTTTTGTTCAATTACACCAAGACATGGGCGTTAATTACAAAGTT
AATCACCCGCCAATTAACGACACAGTATAAATACTGTAGTTTTTGGGATT
TTAGAATCATGCACAGTTCTAACTTACAAAGTATCGAACAAAGCAAAAAC
TTACAATAAGTGGCTGGTACACTTAGATCTTCTTATTCCATAAATACTCA
TATATTTGATTGGAAACTTAACACTGACACAACAATGAAGTTAACAATCG
TTGTTTTATGCCTTGTAATGGCAGGAGTCACGTATGCTGGAAATCAAGCA
AGTAAGTAAAATTTACTTTACCTCGACAATTCGAACACTATAAGTCGATT
GTCTTCATAATTCGAACTTCttcaactcgaacaaattttttaaattttta
taaagttGTTTATATTCTGAAACTCGAACACATTTCATTCCTCTTCGTTC
GTGTTCGACTTATGGAGACATCACCGTATCTCGCGATCTTTGTTTAACGA
TATACTTTGATTTTTGATAGAATAAGTCATGCCCAAGTCTAAGAATACTT
TACTCAATATCTTAAGAACTCATTTTCAGAATAAGAATATCTTTGAGAAT
ATACGGTGTGTATAAAAATAAACCTCTggtgttttgatagatttttcGAA
TCTAATTGGTTCCTTGCAATTTTAGAGAATTAAACTTCATCATAACGaat
ttatcttttatttttattttcacagaTTACTGTCAACCACCAAGTTGCTA
CAAAAGATTCCCTCGTAAGTAGAAAAAGCAAATTCCTCGAAATGCAAAAA
CCAGTACGTTAAAACTGAGCCTCAGACTTTAGCTCTCTTTTTTGCAACCT
TTATTTCCAACCagatttttgttggcgaaaacgTTTAGAACATCCCAGAC
TTAGTCGAAAATTTTTATCCAATCAGATTCAACTCGCTATATTGTAGCGA
GCAGATAAACGGGAAGTTCTAAGCtttttcgccaacaaaaatcataaaaa
agaaataagtttatacctaaactacctttattgttctATTGGGTAAAAAT
CATGTAATTTTAACATTTCTGAAATTaagctcagattgttcttaatttgt
tcttagatttttgaaaaaaaattaatctttaTTTATAGCTTACGCCAATC
AATTATGTTTTAATCTCCATGGTCATCGAAGAGCCGTCGGTTATTACCGT
TATCCATTCAGCCCGCATCTTTTCTTCTACTGCAACAAATTCGGTGTGAA
CTCCGGAACTCAACAATGTCCAGCTGGTCTTTGGTTCTCTGAAAAATGCG
TTCAGTGCTTGAAGCCTTATGATGGTAAGACGAAGTTTTATTATTtgtac
ttttattttttgtcCCAATTCCGGTAAAATAACGTCTGACTTCGTGTAGT
ATGAACAACTTTCTATGCAAGCTGATCCCAGCCACTGACCTTTacatacc
ctggaccaagtttatcaatcccAATCAAGCAAAATCTGAGCTGATCggag
ctttttgaaaaatgatagcctaatggtagcactactcaatagcggtgtaa
atgcatcaaGAGCGCTAGGTCAACTTTCCctagaaaacttttgatgatat
gTAAAGGTCAGTGATCCCAGCCTTCCGCAATTCTAAAATCCATTTTCCTA
CCATTGACCTACCATGACTATCTAAACTTCAATAAGCGTTTGTATATAGA
AATTTCAAGATGGAAATTCCTGATAAATCTCCATGATCTATGACGATATT
CATCTCTTTATCTCTGTCTTTTTTCAGCCGTCAACAATGTTTGCAGTAAG
AGCTCTGGCGATGGTAGTGGACAATCAACAAACACTGATGCCAACTGTAA
GTTGCCTTCTTTATCCCATAGAAATATCTAACTTTGAAAAAGTTTAGCGG
AATAACTTCGGAATAACGCACATTTCTTTACATTTATTTTTTGTGCCGCC
AAATTTTGATCTGAGATTGGATTTAGATGATTTTGCATTTTCACCAAGAG
TATATGTTGATTCATCCTTTTACAAATTGGAGGGGGAACACAAAAGAAAC
TTCAGAATAATATCTATCCCAAACAAAGGTCTCTCGTCCATCAAATCTAG
GCAAAGTTATAGGATATGCTATTCAATATAATTTTCTGAGTAGACCCTGC
TATCCCTCgcaaactacaatcatggacaaaaatgtttgagaaaaacacag
gagtttgcagtaaaaatgtagaaaaagaattatTCGTTCTTTCAGAGATA
AtatgtagacgataggatcgtctaatccCCAATACCAATAATTTTTCGTC
CCTttcgttgtttcaacgttcatctaacgttatatggacgttgtgaacgt
tagatagacGATGAAACAATATTATTTCCTCCCTTCTCCAGGTGCACCAG
AAGGATTCTGTAAACACAAAGCTGATGGATTATACGCATTAAATTCATAT
TCTCCAAAATTCTTCTCTTGTGTCCAATGGAGAGCCACTCAATGTCAATC
GTGTCCAGCTGGTCTTTATTTCAGCCAGAAATGTCAAGTCTGTTTGGAAG
AAGTACACCTTTGTAAGTTTTTCATAAAGCATTCTTCTATTTCTCCGAAG
CAAATCTATTTAGTAAATTCTCCGAGGAAACTCTTAAGAGTAAAATTTCA
ACTTAATGCTATTAATGACGCCCTatatttttatgattctgtttaAACTG
CTTACTAAAGGTTTTTGTGTCTAATTTATTTGTGAATTTTGCTTGACTTC
GCTAAAGATTTCAATGTCGGTCGACAGTGTGAATGTAAAAGCGTCCGTAA
AATTTCATCTCAAATTGAGAACTCGTTGTagtaatttctttttgaaatct
aatcagtctttctttttttctttcaatcatAAAAAGCTACTTGCCCACCA
AGAGGAGACAACTCACCAGCCTCTAAACCACCAAAATGTAAGTTTCTAGA
CTTTTTCCAAAGGCTAGATGTTTTCTTCTCTtcaatccaaaaaaattcaC
CTACCATGCCTTACCAGTGAGGAAAGTTGGGGTTGAATCCAACAATGTAC
CCTACAATCTGTGACttatttgaattaaaattttgtcGAAGGAAATTAAA
TTCACGAATCAGACTTCTTCAGatatatttgtatttttatgtAAGTTTCT
ATTTAAATCACTCTTAAATGGAACTGGGTAATCGAGTCTGACTATGAAAA
GTTTTCACTCAAATCCCTCTCTCAAGTGGAACTTGATTATTTATTCTACA
GATATATTTTCTCAATACTACCGAGTATTAAgcagcctctataagaaacA
CTTTTCACTAGAAGACGAGCAGAAGCTTAACTTTTTCCCTTAATGTTTCA
TAATATCACATTTTTCTTATTCTACGTTAACAGGTGCTAGCAACGATTTG
TGTGAATGGAAAACAGCCGGATATTACGCTTTTAGTGAAAACGCAAACCT
CTTTTTCTACTGTAACGAAAACTACCAAAATGTTGGATGTCAGAGATGTC
CAGCCAACTTGGTTTACAATCAAGCATGCGCTCAATGCTTACCCAAAGAC
CAACAAAAGTGTGATGTACCATCTAAACCATCTAAACCAGCCGAAACTAA
TTTCTGTAAGTATCTAAACtaataatgattttttatttctttaaaatatc
tttccaatagcaaaaactggttttgaaGTGCCAAGAAACCAAATACAGAG
GGATAAACTAAAATCCCATATATATAACTTATAAAGCAATAAAAGTCTTC
ATTTTGAGCTATTGCAACTCTATAATAATTATAGTATTTAGGACGCACTC
TGTCGGATAGAAAGTCATTTTTACTAATAAAGTGAAGGACCTTTGCTAAC
GATATCTATTTATTCACTGTAGGTGAATTAGACAGGTCTTAATTTTTCTG
TACACAATATTTATGCCTCTAATttgaacctctattattcgaatctctct
gtaattcgaactaaaatatagGTCCCCTCAGCCGAAAAGCCGTTTAAAAT
ACTGTCTGTAATTTGAAACTTTCTCTAATCCGAATTAAATTCTTGGTCTc
ttgaatatcgaattagagaaagtcaaCTCATAGTACAAGGTAACAGGAAT
AGTCGAAAATATGGCCACATTCAAAGCAAACACGTGTCTCCTTTTAATAA
CAAAGGAACAAATTCTAATgatatcatttttatttgtgAGCGTGTAAATC
TCGCTAGAAACATTCACGACCACTACACTAGATTAgccgctcaaaataat
ttagcaGTACGGCAAAACAGAAACAGATTTGAAGCAAAAACCTTCGCAAG
CTCTACAATTCCTATCTGGAATAACCTACCCAGGGAATGCCGTGATGCTG
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAAACAA
TTCTTGAGCTGTCTAAAAGCTCTAGAATTTTTCGGAGCCAGCCACTTAAA
ACAttcgttattattattattattattattattatcattttaTTCTATTT
AAAGGTGCACCAGAAGGATTCTGCAAACAACACTCCATCAAGCACAAACC
ATTGACCTTCCTCTTTGCCGTGGAAGGAGACGCCTCGTCATTTTTCTCAT
GCAATCAACTCAAAGAAGCAACACAATGTTTATCTTGCCCTGCTGGTCTT
GTCTTTAACGAAGTTTGTCAAGGATGTCGACAATTCAAAACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008502XLOC_008502Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015178-exon-sc0000205-1491911889:109444..109466TCONS_00015178-exon-sc0000205-1491911889:109444..109466Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1510915933:109444..109466TCONS_00015178-exon-sc0000205-1510915933:109444..109466Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1575043694:109444..109466TCONS_00015178-exon-sc0000205-1575043694:109444..109466Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1491911889:125169..125207TCONS_00015178-exon-sc0000205-1491911889:125169..125207Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1510915933:125169..125207TCONS_00015178-exon-sc0000205-1510915933:125169..125207Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1575043694:125169..125207TCONS_00015178-exon-sc0000205-1575043694:125169..125207Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1491911889:125582..125767TCONS_00015178-exon-sc0000205-1491911889:125582..125767Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1510915933:125582..125767TCONS_00015178-exon-sc0000205-1510915933:125582..125767Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1575043694:125582..125767TCONS_00015178-exon-sc0000205-1575043694:125582..125767Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1491911889:126221..126289TCONS_00015178-exon-sc0000205-1491911889:126221..126289Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1510915933:126221..126289TCONS_00015178-exon-sc0000205-1510915933:126221..126289Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1575043694:126221..126289TCONS_00015178-exon-sc0000205-1575043694:126221..126289Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1491911889:129548..129737TCONS_00015178-exon-sc0000205-1491911889:129548..129737Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1510915933:129548..129737TCONS_00015178-exon-sc0000205-1510915933:129548..129737Clytia hemisphaericaexon
TCONS_00015178-exon-sc0000205-1575043694:129548..129737TCONS_00015178-exon-sc0000205-1575043694:129548..129737Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205supercontigsc0000205:109444..129737 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.229416	0.244076	0	0.342949	0	0	2.55192	1.81033	2.78875	2.58025	0.831438	0.858408	0	0	0	0.283079	0	0	0.0638525	0	0	0	0.264279	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015178 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top