TCONS_00015174 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015174
Unique NameTCONS_00015174
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2219

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015174 ID=TCONS_00015174|Name=TCONS_00015174|organism=Clytia hemisphaerica|type=transcript|length=2219bp
AATTAAAAACACAAATAGATTAACTAGAAACAATCCTGTGGTATCATGAC
TGAAGTTAAACGTCGTAATTCCCTTGAGCGTTATCAACCAAAAAAGACTG
ACCCAACAACAACACCTGATGGAAATGATTTCTCGAATCAATTTAACAAT
ATGTCTTTAAATGGTGGTAATGATTCCTATGATGCGTTTGGTGGCGGTGG
TGGTGGAGGAGGGCGGCACTTGAACAGGGGGAATCACCGAGGAGGTAGTG
GTCGCAGAGGTGTCAATTCTCATTTATATACAAACCAAAACCAGCGAGGA
GGAGGACGTGGTAGGGGCCGTGGTCGCGGGCGGGGCCGAGGAGAAGGTCC
ACAAAACCAAAACGAGCAACGTGGTCCTTTCAGGGGCTCACAGCCTCAAC
AACAGTCGCAAGAAAGTCACCAACGTATTGATTTTGATAAACAGAATTCC
ATAGAAGATGGTGATGATAAATTATCATGGGGAGCTCAACCAGCAGTTGA
ACCAGTCACTTTTCAAGCATCAGATTCCAATACCTCTAGAAATCAACAAT
TTAACAGACAAAAACGTAACGAGATGCAGCAAGTTGACCGTAATTACCAA
AATAAACCGTTCAAAAAGAACACAGAAACGTTCAGACCGTCACATAAACC
AACTGAAATGCGTATTCTATGTGCACCggaaaactggacaaaatataGCC
GTGAGATCTTCTCTAGAGATGTAATGATTATTAATGGACTTTTCTGTCAA
CCAGACGATTTAACATTGTATAATAAACTGTTAAATGAGATTAAGACTTC
AGGTGTTGATCAAGAAGATTTATGGAAACTTTGGCACGGTGATTCTCACG
TTATTGCAGATGATAAATTGAAATGGAAAGAAGCCTGTCCCACCTTTCAT
ATGCTTTTGCATAAGATCAGAGATTACTTTGAAATGGATATCAAAGCAAC
CAGGTTGAATTGGTACCGTGATTCTAAAGAGTGGAAACCGTTCCATCACG
ATGCTGCGGTAATCAAACCAGATAAAGCCAAGACCCAGAACCTGACAGTG
GCCGTTTCTTTCGGCGCGGAACGAGACGCCGCTTTCGAACATGCCAAGAC
GAAAACAGTGATTTCTATGCCACAACCGAATGGTACAATATATGTTTTCG
CCAAAGATGTCAATGTTATGTGGAGACATGGGATTCTACAGGTTCCTCCA
GAGAAATACCACGACGAAGGGCGCGTATCAATTATTGCTTGGGGGTGGTC
CAAGCAGACACCCGTGTGAGAACACATATCCAACATCCTCACATAGTTTA
CCTTCTTTGTTCGGGTGCACTTTCTCTCTGGTATTGAATTGGTTTGAATA
TATCACCATATTGTCCGCTATATGATGGCACGTAACGTTTCAGCATTTAT
CTTATGTTCGCAACGTCCAtaaaacgttaaatgaacgttgaaacaacgtt
gtgcgaCAACTGGACGAGGACCTGTGGATGATGGAGCTGGATTGAGAGCT
TTGGAAGTTTAGAGACAATCTAAACATTCTACCGACAACGTTATGATAAC
GTCCCTGCAACGTCCATACAGCGTTAATTGATGAATATTGAAATAACATA
GTGTTCCATCCAGCAGCTATGTATGTTTACAACGGTTAAAAATTCCACTT
TCGTTTACAACCGAATGACGAGTTTTGTAACCTAAAAGACAGCTCTAACT
TAGAAGATTAGTGTCTCGTATTGTACCGTACGAAGAGCTTAATGGTGTAC
TAGTTACAATAACATTGTTTACCAATATGGAATTATTATGTATTCGAAAA
TGGTGTATTCTTAAGCTTGATTTATTTGATgtgattttgatttgttttaa
aatcttgaaattatgaATTATACTTGCGATGTAGAATTCCTCAGATATCT
CTCGTTAGATTGGATTGGACCTTAAGTTTTCCTATTTATGGATTGAAGTG
AATTTTAAACCTGCCCTGGATGTAAAATATACCTTCAAGTTTTAACCATC
GATAATAATGTTTTAGTGAAAACGATGTCCAATGAAGACCAATGAACATA
ATGGTGTTTGATTTTATCcagattttacattttaagatattttttttgtt
ttttatcgtCAATTATTGTTATTCTATATATTTATCCGAGTTAACTGTTA
CCTGTACAGCAACTCTTTACAAATCTTTAACTTCCATGTCTACTGGAATT
CAGGttgcatattttttta
Run BLAST on NCBI

protein sequence of TCONS_00015174-protein

>TCONS_00015174-protein ID=TCONS_00015174-protein|Name=TCONS_00015174-protein|organism=Clytia hemisphaerica|type=polypeptide|length=407bp
MTEVKRRNSLERYQPKKTDPTTTPDGNDFSNQFNNMSLNGGNDSYDAFGG
GGGGGGRHLNRGNHRGGSGRRGVNSHLYTNQNQRGGGRGRGRGRGRGRGE
GPQNQNEQRGPFRGSQPQQQSQESHQRIDFDKQNSIEDGDDKLSWGAQPA
VEPVTFQASDSNTSRNQQFNRQKRNEMQQVDRNYQNKPFKKNTETFRPSH
KPTEMRILCAPENWTKYSREIFSRDVMIINGLFCQPDDLTLYNKLLNEIK
TSGVDQEDLWKLWHGDSHVIADDKLKWKEACPTFHMLLHKIRDYFEMDIK
ATRLNWYRDSKEWKPFHHDAAVIKPDKAKTQNLTVAVSFGAERDAAFEHA
KTKTVISMPQPNGTIYVFAKDVNVMWRHGILQVPPEKYHDEGRVSIIAWG
WSKQTPV
Run BLAST on NCBI

transcript from alignment at sc0000205:78158..82596+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015174 ID=TCONS_00015174|Name=TCONS_00015174|organism=Clytia hemisphaerica|type=transcript|length=4439bp|location=Sequence derived from alignment at sc0000205:78158..82596+ (Clytia hemisphaerica)
AATTAAAAACACAAATAGATTAACTAGAAACAATCCTGTGGTATCATGAC TGAAGTTAAACGTCGTAATTCCCTTGAGCGTTATCAACCAAAAAAGACTG ACCCAACAACAACACCTGATGGAAATGATTTCTCGAATCAATTTAACAAT ATGTCTTTAAATGGTGGTAATGATTCCTATGATGCGTTTGGTGGCGGTGG TGGTGGAGGAGGGCGGCACTTGAACAGGGGGAATCACCGAGGAGGTAATT TCGTCACAGTAATTTAAAATAAGAGTACATAAGGTCCAAAGTTTTCATTA TTTACATGACCAGGCTGTTTTCGccttaaagttctatttcaaagTGAAGT ATTTTGAAATGTCTTGAATctctttaaaaatgtttattaaaatttaattg tgaaattttttctgaagattttttacaatttagatCTCGTAAGTTTTTAG ATTTAACTCAAACTCAGTATTAAATATAGAAGGCCACAAATCTTAGAACC ACCTCATTATACATCTGTGAAAGTGGAGTAAGGTACAATACtcttttttg taagcataacgtttataagcataattAGGCTCAAACTAAAAATTAGCATA CTGTGAAGCATACTTCCatgctgaaatgcaaaaaaacttGTGCAGCTTTT CTTAAACGCTGGCCTGTTAAGAGTTACTTTTAAAGCTGCTTTAGCTTtct acaggggggggggggggaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNactaacccatagggtactaacttgatttttcactcaatttctttt tagtaccacccacccatatttagtaccgggtactacttcatttttgctgt aaaaaaatggagacaccaccccctaaaattttatattttacagattagac caaAAGAGAGGGTACTATGACTGAGATGGACAGATAATTCAAAAAAACTA TCATTGATTAAGTCCGAGGCTTTTGTCCATTGATTTTAATaacacacttc ttgaccatttcggaagttttgtcttcacaaaatcaaaaaatttctcaaaa gagtaaaaaaaagtttctcaattaaaaaaaatttcaattcaaaaaaataa tatttaaaaaaaagtcaaaatattacaaaagactacttttttattgaaaa aggagcaaaactctgtgaaaaagtacccaaatagtacCCTGTNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctatgggttagtaccctgcc tttGTACCCCCCCTGCTTTCTACGACCCCTTACTAAAGATTgaattaaaa tcttttgttaTCAGGTAGTGGTCGCAGAGGTGTCAATTCTCATTTATATA CAAACCAAAACCAGCGAGGAGGAGGACGTGGTAGGGGCCGTGGTCGCGGG CGGGGCCGAGGAGAAGGTCCACAAAACCAAAACGAGCAACGTGGTCCTTT CAGGGGCTCACAGCCTCAACAACAGTCGCAAGAAAGTCACCAACGTATTG ATTTTGATAAACAGAATTCCATAGAAGATGGTGATGATAAATTATCATGG GGAGCTCAACCAGCAGTTGAACCAGTCACTTTTCAAGCATCAGATTCCAA TACCTCTAGAAATCAACAATTTAACAGACAAAAACGTAACGAGATGCAGC AAGTTGACCGTAATTACCAAAATAAACCGTTCAAAAAGAACACAGAAACG TTCAGACCGTCACATAAACCAACTGAAATGCGTATTCTATGTGCACCgga aaactggacaaaatataGCCGTGAGATCTTCTCTAGAGATGTAATGATTA TTAATGGACTTTTCTGTCAACCAGACGATTTAACATTGTATAATAAACTG TTAAATGAGATTAAGACTTCAGGTGTTGATCAAGAAGATTTATGGAAACT TTGGCACGGTGATTCTCACGTTATTGCAGATGATAAATTGAAATGGAAAG AAGCCTGTCCCACCTTTCATATGCTTTTGCATAAGATCAGAGATTACTTT GAAATGGATATCAAAGGtttgattgaatttttattattttatcaaTATTC ATCAGACTCAAATCTAAATCAAAATCAACCCtcttgaaatactttctata caattcgaatctctctataattcgatcaaataagattccccgttcgtgtt cgaattagcgagagtctactgtaaTAAGATTCTATTTTCTTCTTGCACTG TCGTTATAGCAACCAGGTTGAATTGGTACCGTGATTCTAAAGAGTGGAAA CCGTTCCATCACGATGCTGCGGTAATCAAACCAGATAAAGCCAAGACCCA GAACCTGACAGTGGCCGTTTCTTTCGGCGCGGAACGAGACGCCGCTTTCG AACATGCCAAGACGAAAACAGTGATTTCTATGCCACAACCGAATGGTACA ATATATGTTTTCGCCAAAGATGTCAATGTTATGTGGAGACATGGGATTCT ACAGGTAGGAAGACATCTTGAGATCATGTTTGTTCTACAGGGGTTGACTT ATATTTATATTAAAGATGTATTTTAGATGTACAACGATCAACTCGGTATA CATTCAATcACCATCTGGATAAGGCTATCACTCTGTCTCACTAGAGAAAC ATGGAGATAGACTCTCTTCCTTCACTGCATTTTACGAGTTGACGAAAGTT CATAACAATTACTATNCTCTTCCTTCACTGTATTTTACGAGTTGACGAAA GTTCATAACAATTACTATACAAACTTACACCACTTGACCATCTCTGATCA TCGTTCAAGGGACGTAGAAATCGAGTAACAGGTTTTTTGTAAACCTTGTA AAACTGCTGCGGTTCAAGAGTTTTAATTACcaagaaattcaaattataga agTTTATGGTTTAATgtggtacatgttttttttaataagcaaagTGCGTC TACCCCTATACCAGGCTaacattatgcttagcattttTTGCTATTTAAAC AATAGCCATTGTTAGGTACagaaaactgagcctgcatatgcttataaacg ttatgcttgtaaaaaagaaagacatgtagccatttgagattttttcttta tttcttactAGGTTCCTCCAGAGAAATACCACGACGAAGGGCGCGTATCA ATTATTGCTTGGGGGTGGTCCAAGCAGACACCCGTGTGAGAACACATATC CAACATCCTCACATAGTTTACCTTCTTTGTTCGGGTGCACTTTCTCTCTG GTATTGAATTGGTTTGAATATATCACCATATTGTCCGCTATATGATGGCA CGTAACGTTTCAGCATTTATCTTATGTTCGCAACGTCCAtaaaacgttaa atgaacgttgaaacaacgttgtgcgaCAACTGGACGAGGACCTGTGGATG ATGGAGCTGGATTGAGAGCTTTGGAAGTTTAGAGACAATCTAAACATTCT ACCGACAACGTTATGATAACGTCCCTGCAACGTCCATACAGCGTTAATTG ATGAATATTGAAATAACATAGTGTTCCATCCAGCAGCTATGTATGTTTAC AACGGTTAAAAATTCCACTTTCGTTTACAACCGAATGACGAGTTTTGTAA CCTAAAAGACAGCTCTAACTTAGAAGATTAGTGTCTCGTATTGTACCGTA CGAAGAGCTTAATGGTGTACTAGTTACAATAACATTGTTTACCAATATGG AATTATTATGTATTCGAAAATGGTGTATTCTTAAGCTTGATTTATTTGAT gtgattttgatttgttttaaaatcttgaaattatgaATTATACTTGCGAT GTAGAATTCCTCAGATATCTCTCGTTAGATTGGATTGGACCTTAAGTTTT CCTATTTATGGATTGAAGTGAATTTTAAACCTGCCCTGGATGTAAAATAT ACCTTCAAGTTTTAACCATCGATAATAATGTTTTAGTGAAAACGATGTCC AATGAAGACCAATGAACATAATGGTGTTTGATTTTATCcagattttacat tttaagatattttttttgttttttatcgtCAATTATTGTTATTCTATATA TTTATCCGAGTTAACTGTTACCTGTACAGCAACTCTTTACAAATCTTTAA CTTCCATGTCTACTGGAATTCAGGttgcatattttttta

Coding sequence (CDS) from alignment at sc0000205:78158..82596+

>TCONS_00015174 ID=TCONS_00015174|Name=TCONS_00015174|organism=Clytia hemisphaerica|type=CDS|length=4896bp|location=Sequence derived from alignment at sc0000205:78158..82596+ (Clytia hemisphaerica)
ATGACTGAAGTTAAACGTCGTAATTCCCTTGAGCGTTATCAACCAAAAAA
GACTGACCCAACAACAACACCTGATGGAAATGATTTCTCGAATCAATTTA
ACAATATGTCTTTAAATGGTGGTAATGATTCCTATGATGCGTTTGGTGGC
GGTGGTGGTGGAGGAGGGCGGCACTTGAACAGGGGGAATCACCGAGGAGG
TAGTGGTCGCAGAGGTGTCAATTCTCATTTATATACAAACCAAAACCAGC
GAGGAGGAGGACGTGGTAGGGGCCGTGGTCGCGGGCGGGGCCGAGGAGAA
GGTCCACAAAACCAAAACGAGCAACGTGGTCCTTTCAGGGGCTCACAGCC
TCAACAACAGTCGCAAGAAAGTCACCAACGTATTGATTTTGATAAACAGA
ATTCCATAGAAGATGGTGATGATAAATTATCATGGGGAGCTCAACCAGCA
GTTGAACCAGTCACTTTTCAAGCATCAGATTCCAATACCTCTAGAAATCA
ACAATTTAACAGACAAAAACGTAACGAGATGCAGCAAGTTGACCGTAATT
ACCAAAATAAACCGTTCAAAAAGAACACAGAAACGTTCAGACCGTCACAT
AAACCAACTGAAATGCGTATTCTATGTGCACCggaaaactggacaaaata
taGCCGTGAGATCTTCTCTAGAGATGTAATGATTATTAATGGACTTTTCT
GTCAACCAGACGATTTAACATTGTATAATAAACTGTTAAATGAGATTAAG
ACTTCAGGTGTTGATCAAGAAGATTTATGGAAACTTTGGCACGGTGATTC
TCACGTTATTGCAGATGATAAATTGAAATGGAAAGAAGCCTGTCCCACCT
TTCATATGCTTTTGCATAAGATCAGAGATTACTTTGAAATGGATATCAAA
GCAACCAGGTTGAATTGGTACCGTGATTCTAAAGAGTGGAAACCGTTCCA
TCACGATGCTGCGGTAATCAAACCAGATAAAGCCAAGACCCAGAACCTGA
CAGTGGCCGTTTCTTTCGGCGCGGAACGAGACGCCGCTTTCGAACATGCC
AAGACGAAAACAGTGATTTCTATGCCACAACCGAATGGTACAATATATGT
TTTCGCCAAAGATGTCAATGTTATGTGGAGACATGGGATTCTACAGGTTC
CTCCAGAGAAATACCACGACGAAGGGCGCGTATCAATTATTGCTTGGGGG
TGGTCCAAGCAGACACCCGTGTGAATGACTGAAGTTAAACGTCGTAATTC
CCTTGAGCGTTATCAACCAAAAAAGACTGACCCAACAACAACACCTGATG
GAAATGATTTCTCGAATCAATTTAACAATATGTCTTTAAATGGTGGTAAT
GATTCCTATGATGCGTTTGGTGGCGGTGGTGGTGGAGGAGGGCGGCACTT
GAACAGGGGGAATCACCGAGGAGGTAGTGGTCGCAGAGGTGTCAATTCTC
ATTTATATACAAACCAAAACCAGCGAGGAGGAGGACGTGGTAGGGGCCGT
GGTCGCGGGCGGGGCCGAGGAGAAGGTCCACAAAACCAAAACGAGCAACG
TGGTCCTTTCAGGGGCTCACAGCCTCAACAACAGTCGCAAGAAAGTCACC
AACGTATTGATTTTGATAAACAGAATTCCATAGAAGATGGTGATGATAAA
TTATCATGGGGAGCTCAACCAGCAGTTGAACCAGTCACTTTTCAAGCATC
AGATTCCAATACCTCTAGAAATCAACAATTTAACAGACAAAAACGTAACG
AGATGCAGCAAGTTGACCGTAATTACCAAAATAAACCGTTCAAAAAGAAC
ACAGAAACGTTCAGACCGTCACATAAACCAACTGAAATGCGTATTCTATG
TGCACCggaaaactggacaaaatataGCCGTGAGATCTTCTCTAGAGATG
TAATGATTATTAATGGACTTTTCTGTCAACCAGACGATTTAACATTGTAT
AATAAACTGTTAAATGAGATTAAGACTTCAGGTGTTGATCAAGAAGATTT
ATGGAAACTTTGGCACGGTGATTCTCACGTTATTGCAGATGATAAATTGA
AATGGAAAGAAGCCTGTCCCACCTTTCATATGCTTTTGCATAAGATCAGA
GATTACTTTGAAATGGATATCAAAGCAACCAGGTTGAATTGGTACCGTGA
TTCTAAAGAGTGGAAACCGTTCCATCACGATGCTGCGGTAATCAAACCAG
ATAAAGCCAAGACCCAGAACCTGACAGTGGCCGTTTCTTTCGGCGCGGAA
CGAGACGCCGCTTTCGAACATGCCAAGACGAAAACAGTGATTTCTATGCC
ACAACCGAATGGTACAATATATGTTTTCGCCAAAGATGTCAATGTTATGT
GGAGACATGGGATTCTACAGGTTCCTCCAGAGAAATACCACGACGAAGGG
CGCGTATCAATTATTGCTTGGGGGTGGTCCAAGCAGACACCCGTGTGAAT
GACTGAAGTTAAACGTCGTAATTCCCTTGAGCGTTATCAACCAAAAAAGA
CTGACCCAACAACAACACCTGATGGAAATGATTTCTCGAATCAATTTAAC
AATATGTCTTTAAATGGTGGTAATGATTCCTATGATGCGTTTGGTGGCGG
TGGTGGTGGAGGAGGGCGGCACTTGAACAGGGGGAATCACCGAGGAGGTA
GTGGTCGCAGAGGTGTCAATTCTCATTTATATACAAACCAAAACCAGCGA
GGAGGAGGACGTGGTAGGGGCCGTGGTCGCGGGCGGGGCCGAGGAGAAGG
TCCACAAAACCAAAACGAGCAACGTGGTCCTTTCAGGGGCTCACAGCCTC
AACAACAGTCGCAAGAAAGTCACCAACGTATTGATTTTGATAAACAGAAT
TCCATAGAAGATGGTGATGATAAATTATCATGGGGAGCTCAACCAGCAGT
TGAACCAGTCACTTTTCAAGCATCAGATTCCAATACCTCTAGAAATCAAC
AATTTAACAGACAAAAACGTAACGAGATGCAGCAAGTTGACCGTAATTAC
CAAAATAAACCGTTCAAAAAGAACACAGAAACGTTCAGACCGTCACATAA
ACCAACTGAAATGCGTATTCTATGTGCACCggaaaactggacaaaatata
GCCGTGAGATCTTCTCTAGAGATGTAATGATTATTAATGGACTTTTCTGT
CAACCAGACGATTTAACATTGTATAATAAACTGTTAAATGAGATTAAGAC
TTCAGGTGTTGATCAAGAAGATTTATGGAAACTTTGGCACGGTGATTCTC
ACGTTATTGCAGATGATAAATTGAAATGGAAAGAAGCCTGTCCCACCTTT
CATATGCTTTTGCATAAGATCAGAGATTACTTTGAAATGGATATCAAAGC
AACCAGGTTGAATTGGTACCGTGATTCTAAAGAGTGGAAACCGTTCCATC
ACGATGCTGCGGTAATCAAACCAGATAAAGCCAAGACCCAGAACCTGACA
GTGGCCGTTTCTTTCGGCGCGGAACGAGACGCCGCTTTCGAACATGCCAA
GACGAAAACAGTGATTTCTATGCCACAACCGAATGGTACAATATATGTTT
TCGCCAAAGATGTCAATGTTATGTGGAGACATGGGATTCTACAGGTTCCT
CCAGAGAAATACCACGACGAAGGGCGCGTATCAATTATTGCTTGGGGGTG
GTCCAAGCAGACACCCGTGTGAATGACTGAAGTTAAACGTCGTAATTCCC
TTGAGCGTTATCAACCAAAAAAGACTGACCCAACAACAACACCTGATGGA
AATGATTTCTCGAATCAATTTAACAATATGTCTTTAAATGGTGGTAATGA
TTCCTATGATGCGTTTGGTGGCGGTGGTGGTGGAGGAGGGCGGCACTTGA
ACAGGGGGAATCACCGAGGAGGTAGTGGTCGCAGAGGTGTCAATTCTCAT
TTATATACAAACCAAAACCAGCGAGGAGGAGGACGTGGTAGGGGCCGTGG
TCGCGGGCGGGGCCGAGGAGAAGGTCCACAAAACCAAAACGAGCAACGTG
GTCCTTTCAGGGGCTCACAGCCTCAACAACAGTCGCAAGAAAGTCACCAA
CGTATTGATTTTGATAAACAGAATTCCATAGAAGATGGTGATGATAAATT
ATCATGGGGAGCTCAACCAGCAGTTGAACCAGTCACTTTTCAAGCATCAG
ATTCCAATACCTCTAGAAATCAACAATTTAACAGACAAAAACGTAACGAG
ATGCAGCAAGTTGACCGTAATTACCAAAATAAACCGTTCAAAAAGAACAC
AGAAACGTTCAGACCGTCACATAAACCAACTGAAATGCGTATTCTATGTG
CACCggaaaactggacaaaatataGCCGTGAGATCTTCTCTAGAGATGTA
ATGATTATTAATGGACTTTTCTGTCAACCAGACGATTTAACATTGTATAA
TAAACTGTTAAATGAGATTAAGACTTCAGGTGTTGATCAAGAAGATTTAT
GGAAACTTTGGCACGGTGATTCTCACGTTATTGCAGATGATAAATTGAAA
TGGAAAGAAGCCTGTCCCACCTTTCATATGCTTTTGCATAAGATCAGAGA
TTACTTTGAAATGGATATCAAAGCAACCAGGTTGAATTGGTACCGTGATT
CTAAAGAGTGGAAACCGTTCCATCACGATGCTGCGGTAATCAAACCAGAT
AAAGCCAAGACCCAGAACCTGACAGTGGCCGTTTCTTTCGGCGCGGAACG
AGACGCCGCTTTCGAACATGCCAAGACGAAAACAGTGATTTCTATGCCAC
AACCGAATGGTACAATATATGTTTTCGCCAAAGATGTCAATGTTATGTGG
AGACATGGGATTCTACAGGTTCCTCCAGAGAAATACCACGACGAAGGGCG
CGTATCAATTATTGCTTGGGGGTGGTCCAAGCAGACACCCGTGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008500XLOC_008500Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015174-exon-sc0000205-1491911889:78158..78401TCONS_00015174-exon-sc0000205-1491911889:78158..78401Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1510915933:78158..78401TCONS_00015174-exon-sc0000205-1510915933:78158..78401Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1575043694:78158..78401TCONS_00015174-exon-sc0000205-1575043694:78158..78401Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1491911889:79822..80523TCONS_00015174-exon-sc0000205-1491911889:79822..80523Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1510915933:79822..80523TCONS_00015174-exon-sc0000205-1510915933:79822..80523Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1575043694:79822..80523TCONS_00015174-exon-sc0000205-1575043694:79822..80523Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1491911889:80717..80961TCONS_00015174-exon-sc0000205-1491911889:80717..80961Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1510915933:80717..80961TCONS_00015174-exon-sc0000205-1510915933:80717..80961Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1575043694:80717..80961TCONS_00015174-exon-sc0000205-1575043694:80717..80961Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1491911889:81569..82596TCONS_00015174-exon-sc0000205-1491911889:81569..82596Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1510915933:81569..82596TCONS_00015174-exon-sc0000205-1510915933:81569..82596Clytia hemisphaericaexon
TCONS_00015174-exon-sc0000205-1575043694:81569..82596TCONS_00015174-exon-sc0000205-1575043694:81569..82596Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015174-proteinTCONS_00015174-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205supercontigsc0000205:78158..82596 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.54777 3.52849 1.61878 0.762533 17.6617 13.5615 15.9983 16.8894 10.7389 11.1832 8.15439 8.42849 6.50333 5.54687 8.11831 8.368 15.092 12.9971 6.39818 7.08792 14.7276 14.5088 15.9474 16.9272 5.6094 5.56439 11.8592 8.75591 17.5142 18.7424
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027450AlkB-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015174 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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