TCONS_00015170 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015170
Unique NameTCONS_00015170
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015170 ID=TCONS_00015170|Name=TCONS_00015170|organism=Clytia hemisphaerica|type=transcript|length=2187bp
ctttttttccggacaccctgtagagtAGACCAGAAGAACGAAGAAATAGT
AATCTCCATCCTGGATGTTAACTTAACGACTTTGAAAATAGATATTgagg
ttttgaaaattttgagagaTGTCGAACTTCCGCCCTTTCACTTGGTGGCG
AGAAGAAAGGGTGCCTATTGGGTTGGCTCCAAGTTGGCAGTTGGAGCTTG
CAGTTTAACCCGAATGGACCTTAGGGTTTGTCCAAAACTACTGTTTAATT
TTGGAATGTAAAAAACGTCTATCTGATTTAACGTTAGACAAAAGAAATTG
AAGTAGTCTTTTTATTCTAGCTAGGTTGAGTCAAAAATTGTCTCCCGAGA
ACAAACAAAGTTCGTTCTGACTGCACAAAGCGATATAAAAAtccttttat
ttctttttcatagtaaaaacatcaaaaaacaaGATGAAGGCCATTAACCT
CTTTCTCATGTCTTCCATTATTATGGAGGTAACATGTCGAAAGAAGTTGG
TCGGATATTGGGGAGATAATTCATCGGGCAGTGAGAAAGAGTTGAAATAT
TATTGCGATTTGGATATTTATGACACCATCATCCTCATGCAACTCTCACA
AAATGACCACGCGGTAAACAAAGACGGTCTACCATCTTTGAACTTTGCCA
ACCATTGCAACAACAACCCTTTACTGACAGAGGATTACAACTACAATTTG
TACAAAAGATGTCCATTGATAGAAGATCATATACGACACTGCCAACGCAA
AGGAATAAAGATGTTATTGAACGTTGGAGGACCAGGATCCCAATACATCG
GTTGGAACAGTAAAAAACATGCTTACGATGACGCGTTCTTGTGGTGGAAC
CTCTTCTTTGGAGGTGATGAGAGTCCCAAGATACGAACGTTCGGGAGCGT
CAGATTGGATGGTTTAAACTTACACTTGGTGGCCAgcagaaaagattacg
tcatcgACTTCATCGAAAACATGCGCTTCTTAATGACCAAAAGAAACGCC
ACAAAACAATACGTCCTAACCGTGTCGCCCGATTGTTACACCCTCGACAT
CAGGGCGGCTTTTATTTACGACGCCATCACCATCGCAACTAATAGCTTTG
ACGCGTTTTTTGTTGATTTCGCACACCAGAATTGCTATCTGTCTTCAAAG
GACTTTGTGAGCTATTTCAACAAATGGACCTCCCTGCTAAGAGGTAAACA
ACCAGATTTGTACTTGACGCTCTCAGGTAGCGACCAAGGATCACAAAGGA
ATTTCATTCAACCTCAAGACGTGCAAGAAGCCTTAAGAAAGAATGATGTC
ATCTCACAGATCAAGGGAATCACCTTAAATGACGTCGGTGATGATTCCCT
GAACCTTGTTCGTGCAAACAAAAGATACAGCTACTACATTCGAATGTTGT
TGGATGACCCTAAATTTGACGTTCTTTCCATTACTACGACCACCACAACG
ACAACAACCACCCGGGCGCCCAAAAAATCTAATGGCGGAGGTAGAAGTAG
TGGCGGGGGTGGTCTTCGCGTCATCAACAGAAATTCGAATTTCTATTATC
CAGGGAAAGGAACGAGGAACGGTGCAAGCCACTTGGTGATGTTCATGTCA
TTGATGGCGATTGTGGCCAGTCTTCTACTTCTCTGAGTGGATCTGTtttg
atagaaagaaaaaaatgatcagtttacagggatttttctaagcactctCT
CTGAGCTGGGTCCGTTTTAGATTGAGAAATTTAGATTGAGTTTCTAATGC
CTGAGCGCTTAGAAGCTCCCTAGTACTTTCAGAACTGAACTGAATCTtgg
attgagtattttggccggTATACGAACATAagaaagtgcttagaaaaatt
cCTGGTTTATGATTAGAAAGATGGAAAGAGATGGTGGCATTCTGATCGGT
GAATACGAAACCTTCAACATGGTACTTTTTTTCGGATGTcatagttttta
aaaatatgataGGAATCATCTCAAATTATCAGCCAGTGAATTTACAAATG
GGGATAATTATTAATAAAATTTGGATGAATTTGTGACtctgtgctcgttg
aaaagataattatgAGCGCAGTATCTTACAATGtgataaacttttaaaaa
aaagtgaagaagtaAATATCAAGTCCTGGTTGAATAGTGCTATAAttctt
atacacgtttttttttttaataaggaacacgtttata
Run BLAST on NCBI

protein sequence of TCONS_00015170-protein

>TCONS_00015170-protein ID=TCONS_00015170-protein|Name=TCONS_00015170-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
MKAINLFLMSSIIMEVTCRKKLVGYWGDNSSGSEKELKYYCDLDIYDTII
LMQLSQNDHAVNKDGLPSLNFANHCNNNPLLTEDYNYNLYKRCPLIEDHI
RHCQRKGIKMLLNVGGPGSQYIGWNSKKHAYDDAFLWWNLFFGGDESPKI
RTFGSVRLDGLNLHLVASRKDYVIDFIENMRFLMTKRNATKQYVLTVSPD
CYTLDIRAAFIYDAITIATNSFDAFFVDFAHQNCYLSSKDFVSYFNKWTS
LLRGKQPDLYLTLSGSDQGSQRNFIQPQDVQEALRKNDVISQIKGITLND
VGDDSLNLVRANKRYSYYIRMLLDDPKFDVLSITTTTTTTTTTRAPKKSN
GGGRSSGGGGLRVINRNSNFYYPGKGTRNGASHLVMFMSLMAIVASLLLL
Run BLAST on NCBI

transcript from alignment at sc0000205:34267..40226+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015170 ID=TCONS_00015170|Name=TCONS_00015170|organism=Clytia hemisphaerica|type=transcript|length=5960bp|location=Sequence derived from alignment at sc0000205:34267..40226+ (Clytia hemisphaerica)
ctttttttccggacaccctgtagagtAGACCAGAAGAACGAAGAAATAGT AATCTCCATCCTGGATGTTAACTTAACGACTTTGAAAATAGATATTgagg ttttgaaaattttgagagaTGTCGAACTTCCGCCCTTTCACTTGGTGGCG AGAAGAAAGGGTGCCTATTGGGTTGGCTCCAAGTTGGCAGTTGGAGCTTG CAGTTTAACCCGAATGGACCTTAGGGTTTGTCCAAAACTACTGTTTAATT TTGGAATGTAAAAAACGTCTATCTGATTTAACGTTAGACAAAAGAAATTG AAGTAGTCTTTTTATTCTAGCTAGGTTGAGTCAAAAATTGTCTCCCGAGA ACAAACAAAGTTCGTTCTGACTGCACAAAGCGATATAAAAAtccttttat ttctttttcatagtaaaaacatcaaaaaacaaGATGAAGGCCATTAACCT CTTTCTCATGTCTTCCATTATTATGGAGGTAACATGTCGAAAGAAGTTGG TCGGATATTGGGGAGATAATTCATCGGGCAGTGAGAAAGAGTTGAAATAT TATTGCGATTTGGATATTTATGACACCATCATCCTCATGCAACTCTCACA AAATGACCACGCGGTAAACAAAGGTATGGGTTATTTTATCGAAGAACATG AGGAgaaccctgtctcacaaccccggtggAGACCCCCTGTTTTTCCACAG CGGGATAAAACTTTCTATCTAAATCCCAATGGGATGGGAAATTCTGTTGT TTTAAGCTTGAAAAACTCATTGGGATGGTTTTTGGAATGCAATTTTTTgc attgattttttaatttcgggggtaaaatcaaaattattttcccagtcggg ctgaaattgtagggaaTTTCTCATCCCACCAGGGACAAAATTCTGGCCTA AACTTCCAGTGGGGTAAGAGTTccagcgggtctatgacacGGGGGTTACG AGGCTCAATTTTGGCGAAACCTTGGAACAGATTAAAGACAATTCCAGCCT CAGAGTTCAGAAATGGTTTAAAAAAGTGCTGACTTTAGGCTTCTCCTAAG TCAATAGGGGAACACAGAGTAAGCTTCGACGGCAGAGAGACAGCCGAACC TCAGTAATAGTTTactaattatttcaaaataaagtaGAATTCTAAAGAGG AAATTCATATACGTTTTTCTCTCAGACGGTCTACCATCTTTGAACTTTGC CAACCATTGCAACAACAACCCTTTACTGACAGAGGATTACAACTACAATT TGTACAAAAGATGTCCATTGATAGAAGATCATATACGACACTGCCAACGC AAAGGTTTGTATTACAAATAAAtattctattcatgatatgcaccactgca atgtcttctgacattacgtcacggaACCAATGGctgattggttggaagtg acgtaaaatcagtcaatacgtcactttcaaccaatcagctattgggtgga acggaagacattgcaatggtgtatatcatgaatatacagttgacgccctc aaataatttgattttcaaggggaattggattttcatcgtaTGGTAGAGTG TCGTTTATATGATTTTCTTGTTGACggcgactttcaatattatcgaataa tggagcgtatcgaatagtagaacgtcgaactAGAGAGCATCAATATTGTA CAAAAGTGACATTTCAGAAACAGCGGCTGGTCCGAGCTCAAAGTTTCGAT ATCGaaatacagtaaaacctctaattaacggacactctaaaaggcggaca cctctgattagcggacaatttcatctTTCCCGGTCGTTTcttagtcaaat cctcataaaaaagtttctaaaaggcggacactcaattagcggaccatCTG ATTAGCGGACAGATTTTTTcacacgaaatggccaaaacccctattttagc tcctcaattagcggacattgaatatcaaacgggtcacagacgttaaaaaa aaaaagtttttagatatttttatttcaagcacttattagtcttattattc aaattattcattTATTGTTTCTACAAATTTCtagttttcccttgacccat tcaacgaatttaAGTGGGCctaagaaatcataaatcactggtacTTCAAG TCCGTACCCACCCCCTCGATTTAACCTCTTGCCAGTCACTCGAgctcttc tatggcctagtgtctgcagataagtactttagaccccaattttgtatttt cgacaccctgggatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtggcctaattt caaaattggagctccaagatcaaaagtttctaaaaggcggacacttctaa ttagcggacactaacccctttccccaatggtgtccgctaattagatgTTC CACTGTACTTCTAGAAAGTGCTTAAAGCAAAGTTGCAAAGTTTTTTGTCT TAAACGGAAATGTATTTCAAACAAACAATATAGGCAAGGTTTCTTCAAAG TTTGGAGACGGAAAAGCCTTATCTCGGACACACCTGGTATTTACGTTCAG TGACACTTAAGAACATTGGAGTGTATTTTGTAATCATTTTCACTTAGATT ATCATTTTTCACTTAGATTACCATTGTTTGATGTCCATTAGGTATTGACG CTAGCTAGAAAAGCTCAGTGACATTGACTTTCTACTATTTCTGAAGGAAT AAAGATGTTATTGAACGTTGGAGGACCAGGATCCCAATACATCGGTTGGA ACAGTAAAAAACATGCTTACGATGACGCGTTCTTGTGGTGGAACCTCTTC TTTGGAGGTGATGAGAGTCCCAAGATACGAACGTTCGGGAGGTAAGGTTG TGAATTACCCTTATCGGATTCTTATTACGccaaagtttttttctattttt agcaCGGCTCTAATTTAATAGACCTTGTCGGAGTTtaggatttttctgaa aaagcgatcatgcattgtgggattgtttcgagtatattacaatagaattc cctcgaggaattcttaagagatttctattgtaatacactcgaaacaatcc cacaatgcatcgcttttttagaaaaATCAAAAACTTCGATAAGGTCTATT CCAATCCCTTACAACAGCCCTTATTACAACAGCGACAAAGAAATAACGCC AATAAACGTCGGTGTAAAAAGGGTCGATAAGGCTGGAAAATGCTTAAGTT TCCGGCTTGTCCGACCCTATACCTATGAGTGATGAGAGTCCAAAGATACG AACTCCCGGGaggtaaaaaaacaaaaaaattacaagtTCAAAATCACTCG CTCGTCAAACCTTACCTCCCGAAAGTTCTAAACTATTCGATAACTCGATT GCCTCAAACTACTTTCGATAACTCAAACGGATTGTTTCAAAACCCTGAGA GAAATCAACGCTAACTTGTCTTTCTATTACATAAACTTTCCAAATTCGAG CACGATCACTCTTTCTTGCTGTTAAAGTTAAGGGAACTCAAACCGCGTAT ATTTAAGTTGCAAGTTGGCTTGAGcaacaatagcgagtttatgtatgtgt gtttttcagcgacggagacggtaaggtttttaccgtcctcgattttgcgg ggcggaattgcgggtttttccaaaccgcttcagtcactctaccgtcctca aaagtgcaaatacataaactcgctaatgattATAAGGAggaggataatca cgacgacggacgaaaaatgtaataggcttgtgaaaatagaaaatttgatt ggttgaaactctcTAGcctgttaattttttgttcgtcgtcgtgattttac cgatttacatAACTTCACTATTACGCAAAGATTTAGAAACCTCTTTCTCA TTTCGCAGCGTCAGATTGGATGGTTTAAACTTACACTTGGTGGCCAgcag aaaagattacgtcatcgACTTCATCGAAAACATGCGCTTCTTAATGACCA AAAGAAACGCCACAAAACAATACGTCCTAACCGTGTCGCCCGATTGTTAC ACCCTCGACATCAGGGCGGCTTTTATTTACGACGCCATCACCATCGCAAC TAATAGCTTTGACGCGTTTTTTGTTGATTTCGCACACCAGAATTGCTATC TGTCTTCAAAGGACTTTGTGAGCTATTTCAACAAATGGACCTCCCTGCTA AGAGGTAAACAACCAGATTTGTACTTGACGCTCTCAGGTAGCGACCAAGG ATCACAAAGGAATTTCATTCAACCTCAAGACGTGCAAGAAGCCTTAAGAA AGGTTAGAGAGTTTATAATTTTATtgatatgacattttttgtatGCTGAC GTTGAGGAAGTTTAGTCAGGCTTATTAGCCTTAAAGCGCAATCTCTGTGA TTTATGGAAGGATTGGATCAATTCCTACAACTATGTTGAACTacattgaa aattgattatcttagAATCTCTAAGAGGCTTTACATCTAGAACACCATTG CTCAGATCATGGCTTATAAGTAGGTTCTAGGTGGCCCCTAagaatttagg tgacccctaggAGCTATGCACATCTCCAATTATTCAAGTATTCAAACGGT ATCTAACTATGTGTGTTTTTCCAATAGAATGATGTCATCTCACAGATCAA GGGAATCACCTTAAATGACGTCGGTGATGATTCCCTGAACCTTGTTCGTG CAAACAAAAGATACAGCTACTACATTCGAATGTTGTTGGATGACCCTAAA TTTGACGTTCTTTCCATTACTACGACCACCACAACGACAACAACCACCCG GGCGCCCAAAAAATCTAATGGCGGAGGTAGAAGTAGTGGCGGGGGTGGTC TTCGCGTCATCAACAGAAATTCGAATTTCTATTATCCAGGGAAAGGTAGG GGCGTGAATTCTTGGACTGATCATTTCCTTCAAAGACCTTGCTGTAAATC TTCACACTGGCTTACTTCTTATCAAACAACAATAAACATGCTATATACAT CCTAACATAAAATACGTGCATGATATTAAACGCAGCTGGTATTAAACGTG CCTTATATGAAATAAGTTTGATATAAAACATGCCTTATATGAAATGAGTT TGATATAAAACGTGCCTTATATGAAACGAGTTTGATATAAAACGTGCCTG ATATAAAATGAGTTTGATATGAAACGTGCCTGATATAAAATGAGTTTGAT ATAAAATGAGTTTGATATAAAACGTGCCTTATATGAAATGAGTTTGATAT AAAACGTGCCTGATATGCAATGATTTaagtataaaaaaaaatgtcttacc tTTCTTCTTTAATGTTGTCTTCTTTTCCACAGGAACGAGGAACGGTGCAA GCCACTTGGTGATGTTCATGTCATTGATGGCGATTGTGGCCAGTCTTCTA CTTCTCTGAGTGGATCTGTtttgatagaaagaaaaaaatgatcagtttac agggatttttctaagcactctCTCTGAGCTGGGTCCGTTTTAGATTGAGA AATTTAGATTGAGTTTCTAATGCCTGAGCGCTTAGAAGCTCCCTAGTACT TTCAGAACTGAACTGAATCTtggattgagtattttggccggTATACGAAC ATAagaaagtgcttagaaaaattcCTGGTTTATGATTAGAAAGATGGAAA GAGATGGTGGCATTCTGATCGGTGAATACGAAACCTTCAACATGGTACTT TTTTTCGGATGTcatagtttttaaaaatatgataGGAATCATCTCAAATT ATCAGCCAGTGAATTTACAAATGGGGATAATTATTAATAAAATTTGGATG AATTTGTGACtctgtgctcgttgaaaagataattatgAGCGCAGTATCTT ACAATGtgataaacttttaaaaaaaagtgaagaagtaAATATCAAGTCCT GGTTGAATAGTGCTATAAttcttatacacgtttttttttttaataaggaa cacgtttata

Coding sequence (CDS) from alignment at sc0000205:34267..40226+

>TCONS_00015170 ID=TCONS_00015170|Name=TCONS_00015170|organism=Clytia hemisphaerica|type=CDS|length=7218bp|location=Sequence derived from alignment at sc0000205:34267..40226+ (Clytia hemisphaerica)
ATGAAGGCCATTAACCTCTTTCTCATGTCTTCCATTATTATGGAGGTAAC
ATGTCGAAAGAAGTTGGTCGGATATTGGGGAGATAATTCATCGGGCAGTG
AGAAAGAGTTGAAATATTATTGCGATTTGGATATTTATGACACCATCATC
CTCATGCAACTCTCACAAAATGACCACGCGGTAAACAAAGACGGTCTACC
ATCTTTGAACTTTGCCAACCATTGCAACAACAACCCTTTACTGACAGAGG
ATTACAACTACAATTTGTACAAAAGATGTCCATTGATAGAAGATCATATA
CGACACTGCCAACGCAAAGGAATAAAGATGTTATTGAACGTTGGAGGACC
AGGATCCCAATACATCGGTTGGAACAGTAAAAAACATGCTTACGATGACG
CGTTCTTGTGGTGGAACCTCTTCTTTGGAGGTGATGAGAGTCCCAAGATA
CGAACGTTCGGGAGCGTCAGATTGGATGGTTTAAACTTACACTTGGTGGC
CAgcagaaaagattacgtcatcgACTTCATCGAAAACATGCGCTTCTTAA
TGACCAAAAGAAACGCCACAAAACAATACGTCCTAACCGTGTCGCCCGAT
TGTTACACCCTCGACATCAGGGCGGCTTTTATTTACGACGCCATCACCAT
CGCAACTAATAGCTTTGACGCGTTTTTTGTTGATTTCGCACACCAGAATT
GCTATCTGTCTTCAAAGGACTTTGTGAGCTATTTCAACAAATGGACCTCC
CTGCTAAGAGGTAAACAACCAGATTTGTACTTGACGCTCTCAGGTAGCGA
CCAAGGATCACAAAGGAATTTCATTCAACCTCAAGACGTGCAAGAAGCCT
TAAGAAAGAATGATGTCATCTCACAGATCAAGGGAATCACCTTAAATGAC
GTCGGTGATGATTCCCTGAACCTTGTTCGTGCAAACAAAAGATACAGCTA
CTACATTCGAATGTTGTTGGATGACCCTAAATTTGACGTTCTTTCCATTA
CTACGACCACCACAACGACAACAACCACCCGGGCGCCCAAAAAATCTAAT
GGCGGAGGTAGAAGTAGTGGCGGGGGTGGTCTTCGCGTCATCAACAGAAA
TTCGAATTTCTATTATCCAGGGAAAGGAACGAGGAACGGTGCAAGCCACT
TGGTGATGTTCATGTCATTGATGGCGATTGTGGCCAGTCTTCTACTTCTC
TGAATGAAGGCCATTAACCTCTTTCTCATGTCTTCCATTATTATGGAGGT
AACATGTCGAAAGAAGTTGGTCGGATATTGGGGAGATAATTCATCGGGCA
GTGAGAAAGAGTTGAAATATTATTGCGATTTGGATATTTATGACACCATC
ATCCTCATGCAACTCTCACAAAATGACCACGCGGTAAACAAAGACGGTCT
ACCATCTTTGAACTTTGCCAACCATTGCAACAACAACCCTTTACTGACAG
AGGATTACAACTACAATTTGTACAAAAGATGTCCATTGATAGAAGATCAT
ATACGACACTGCCAACGCAAAGGAATAAAGATGTTATTGAACGTTGGAGG
ACCAGGATCCCAATACATCGGTTGGAACAGTAAAAAACATGCTTACGATG
ACGCGTTCTTGTGGTGGAACCTCTTCTTTGGAGGTGATGAGAGTCCCAAG
ATACGAACGTTCGGGAGCGTCAGATTGGATGGTTTAAACTTACACTTGGT
GGCCAgcagaaaagattacgtcatcgACTTCATCGAAAACATGCGCTTCT
TAATGACCAAAAGAAACGCCACAAAACAATACGTCCTAACCGTGTCGCCC
GATTGTTACACCCTCGACATCAGGGCGGCTTTTATTTACGACGCCATCAC
CATCGCAACTAATAGCTTTGACGCGTTTTTTGTTGATTTCGCACACCAGA
ATTGCTATCTGTCTTCAAAGGACTTTGTGAGCTATTTCAACAAATGGACC
TCCCTGCTAAGAGGTAAACAACCAGATTTGTACTTGACGCTCTCAGGTAG
CGACCAAGGATCACAAAGGAATTTCATTCAACCTCAAGACGTGCAAGAAG
CCTTAAGAAAGAATGATGTCATCTCACAGATCAAGGGAATCACCTTAAAT
GACGTCGGTGATGATTCCCTGAACCTTGTTCGTGCAAACAAAAGATACAG
CTACTACATTCGAATGTTGTTGGATGACCCTAAATTTGACGTTCTTTCCA
TTACTACGACCACCACAACGACAACAACCACCCGGGCGCCCAAAAAATCT
AATGGCGGAGGTAGAAGTAGTGGCGGGGGTGGTCTTCGCGTCATCAACAG
AAATTCGAATTTCTATTATCCAGGGAAAGGAACGAGGAACGGTGCAAGCC
ACTTGGTGATGTTCATGTCATTGATGGCGATTGTGGCCAGTCTTCTACTT
CTCTGAATGAAGGCCATTAACCTCTTTCTCATGTCTTCCATTATTATGGA
GGTAACATGTCGAAAGAAGTTGGTCGGATATTGGGGAGATAATTCATCGG
GCAGTGAGAAAGAGTTGAAATATTATTGCGATTTGGATATTTATGACACC
ATCATCCTCATGCAACTCTCACAAAATGACCACGCGGTAAACAAAGACGG
TCTACCATCTTTGAACTTTGCCAACCATTGCAACAACAACCCTTTACTGA
CAGAGGATTACAACTACAATTTGTACAAAAGATGTCCATTGATAGAAGAT
CATATACGACACTGCCAACGCAAAGGAATAAAGATGTTATTGAACGTTGG
AGGACCAGGATCCCAATACATCGGTTGGAACAGTAAAAAACATGCTTACG
ATGACGCGTTCTTGTGGTGGAACCTCTTCTTTGGAGGTGATGAGAGTCCC
AAGATACGAACGTTCGGGAGCGTCAGATTGGATGGTTTAAACTTACACTT
GGTGGCCAgcagaaaagattacgtcatcgACTTCATCGAAAACATGCGCT
TCTTAATGACCAAAAGAAACGCCACAAAACAATACGTCCTAACCGTGTCG
CCCGATTGTTACACCCTCGACATCAGGGCGGCTTTTATTTACGACGCCAT
CACCATCGCAACTAATAGCTTTGACGCGTTTTTTGTTGATTTCGCACACC
AGAATTGCTATCTGTCTTCAAAGGACTTTGTGAGCTATTTCAACAAATGG
ACCTCCCTGCTAAGAGGTAAACAACCAGATTTGTACTTGACGCTCTCAGG
TAGCGACCAAGGATCACAAAGGAATTTCATTCAACCTCAAGACGTGCAAG
AAGCCTTAAGAAAGAATGATGTCATCTCACAGATCAAGGGAATCACCTTA
AATGACGTCGGTGATGATTCCCTGAACCTTGTTCGTGCAAACAAAAGATA
CAGCTACTACATTCGAATGTTGTTGGATGACCCTAAATTTGACGTTCTTT
CCATTACTACGACCACCACAACGACAACAACCACCCGGGCGCCCAAAAAA
TCTAATGGCGGAGGTAGAAGTAGTGGCGGGGGTGGTCTTCGCGTCATCAA
CAGAAATTCGAATTTCTATTATCCAGGGAAAGGAACGAGGAACGGTGCAA
GCCACTTGGTGATGTTCATGTCATTGATGGCGATTGTGGCCAGTCTTCTA
CTTCTCTGAATGAAGGCCATTAACCTCTTTCTCATGTCTTCCATTATTAT
GGAGGTAACATGTCGAAAGAAGTTGGTCGGATATTGGGGAGATAATTCAT
CGGGCAGTGAGAAAGAGTTGAAATATTATTGCGATTTGGATATTTATGAC
ACCATCATCCTCATGCAACTCTCACAAAATGACCACGCGGTAAACAAAGA
CGGTCTACCATCTTTGAACTTTGCCAACCATTGCAACAACAACCCTTTAC
TGACAGAGGATTACAACTACAATTTGTACAAAAGATGTCCATTGATAGAA
GATCATATACGACACTGCCAACGCAAAGGAATAAAGATGTTATTGAACGT
TGGAGGACCAGGATCCCAATACATCGGTTGGAACAGTAAAAAACATGCTT
ACGATGACGCGTTCTTGTGGTGGAACCTCTTCTTTGGAGGTGATGAGAGT
CCCAAGATACGAACGTTCGGGAGCGTCAGATTGGATGGTTTAAACTTACA
CTTGGTGGCCAgcagaaaagattacgtcatcgACTTCATCGAAAACATGC
GCTTCTTAATGACCAAAAGAAACGCCACAAAACAATACGTCCTAACCGTG
TCGCCCGATTGTTACACCCTCGACATCAGGGCGGCTTTTATTTACGACGC
CATCACCATCGCAACTAATAGCTTTGACGCGTTTTTTGTTGATTTCGCAC
ACCAGAATTGCTATCTGTCTTCAAAGGACTTTGTGAGCTATTTCAACAAA
TGGACCTCCCTGCTAAGAGGTAAACAACCAGATTTGTACTTGACGCTCTC
AGGTAGCGACCAAGGATCACAAAGGAATTTCATTCAACCTCAAGACGTGC
AAGAAGCCTTAAGAAAGAATGATGTCATCTCACAGATCAAGGGAATCACC
TTAAATGACGTCGGTGATGATTCCCTGAACCTTGTTCGTGCAAACAAAAG
ATACAGCTACTACATTCGAATGTTGTTGGATGACCCTAAATTTGACGTTC
TTTCCATTACTACGACCACCACAACGACAACAACCACCCGGGCGCCCAAA
AAATCTAATGGCGGAGGTAGAAGTAGTGGCGGGGGTGGTCTTCGCGTCAT
CAACAGAAATTCGAATTTCTATTATCCAGGGAAAGGAACGAGGAACGGTG
CAAGCCACTTGGTGATGTTCATGTCATTGATGGCGATTGTGGCCAGTCTT
CTACTTCTCTGAATGAAGGCCATTAACCTCTTTCTCATGTCTTCCATTAT
TATGGAGGTAACATGTCGAAAGAAGTTGGTCGGATATTGGGGAGATAATT
CATCGGGCAGTGAGAAAGAGTTGAAATATTATTGCGATTTGGATATTTAT
GACACCATCATCCTCATGCAACTCTCACAAAATGACCACGCGGTAAACAA
AGACGGTCTACCATCTTTGAACTTTGCCAACCATTGCAACAACAACCCTT
TACTGACAGAGGATTACAACTACAATTTGTACAAAAGATGTCCATTGATA
GAAGATCATATACGACACTGCCAACGCAAAGGAATAAAGATGTTATTGAA
CGTTGGAGGACCAGGATCCCAATACATCGGTTGGAACAGTAAAAAACATG
CTTACGATGACGCGTTCTTGTGGTGGAACCTCTTCTTTGGAGGTGATGAG
AGTCCCAAGATACGAACGTTCGGGAGCGTCAGATTGGATGGTTTAAACTT
ACACTTGGTGGCCAgcagaaaagattacgtcatcgACTTCATCGAAAACA
TGCGCTTCTTAATGACCAAAAGAAACGCCACAAAACAATACGTCCTAACC
GTGTCGCCCGATTGTTACACCCTCGACATCAGGGCGGCTTTTATTTACGA
CGCCATCACCATCGCAACTAATAGCTTTGACGCGTTTTTTGTTGATTTCG
CACACCAGAATTGCTATCTGTCTTCAAAGGACTTTGTGAGCTATTTCAAC
AAATGGACCTCCCTGCTAAGAGGTAAACAACCAGATTTGTACTTGACGCT
CTCAGGTAGCGACCAAGGATCACAAAGGAATTTCATTCAACCTCAAGACG
TGCAAGAAGCCTTAAGAAAGAATGATGTCATCTCACAGATCAAGGGAATC
ACCTTAAATGACGTCGGTGATGATTCCCTGAACCTTGTTCGTGCAAACAA
AAGATACAGCTACTACATTCGAATGTTGTTGGATGACCCTAAATTTGACG
TTCTTTCCATTACTACGACCACCACAACGACAACAACCACCCGGGCGCCC
AAAAAATCTAATGGCGGAGGTAGAAGTAGTGGCGGGGGTGGTCTTCGCGT
CATCAACAGAAATTCGAATTTCTATTATCCAGGGAAAGGAACGAGGAACG
GTGCAAGCCACTTGGTGATGTTCATGTCATTGATGGCGATTGTGGCCAGT
CTTCTACTTCTCTGAATGAAGGCCATTAACCTCTTTCTCATGTCTTCCAT
TATTATGGAGGTAACATGTCGAAAGAAGTTGGTCGGATATTGGGGAGATA
ATTCATCGGGCAGTGAGAAAGAGTTGAAATATTATTGCGATTTGGATATT
TATGACACCATCATCCTCATGCAACTCTCACAAAATGACCACGCGGTAAA
CAAAGACGGTCTACCATCTTTGAACTTTGCCAACCATTGCAACAACAACC
CTTTACTGACAGAGGATTACAACTACAATTTGTACAAAAGATGTCCATTG
ATAGAAGATCATATACGACACTGCCAACGCAAAGGAATAAAGATGTTATT
GAACGTTGGAGGACCAGGATCCCAATACATCGGTTGGAACAGTAAAAAAC
ATGCTTACGATGACGCGTTCTTGTGGTGGAACCTCTTCTTTGGAGGTGAT
GAGAGTCCCAAGATACGAACGTTCGGGAGCGTCAGATTGGATGGTTTAAA
CTTACACTTGGTGGCCAgcagaaaagattacgtcatcgACTTCATCGAAA
ACATGCGCTTCTTAATGACCAAAAGAAACGCCACAAAACAATACGTCCTA
ACCGTGTCGCCCGATTGTTACACCCTCGACATCAGGGCGGCTTTTATTTA
CGACGCCATCACCATCGCAACTAATAGCTTTGACGCGTTTTTTGTTGATT
TCGCACACCAGAATTGCTATCTGTCTTCAAAGGACTTTGTGAGCTATTTC
AACAAATGGACCTCCCTGCTAAGAGGTAAACAACCAGATTTGTACTTGAC
GCTCTCAGGTAGCGACCAAGGATCACAAAGGAATTTCATTCAACCTCAAG
ACGTGCAAGAAGCCTTAAGAAAGAATGATGTCATCTCACAGATCAAGGGA
ATCACCTTAAATGACGTCGGTGATGATTCCCTGAACCTTGTTCGTGCAAA
CAAAAGATACAGCTACTACATTCGAATGTTGTTGGATGACCCTAAATTTG
ACGTTCTTTCCATTACTACGACCACCACAACGACAACAACCACCCGGGCG
CCCAAAAAATCTAATGGCGGAGGTAGAAGTAGTGGCGGGGGTGGTCTTCG
CGTCATCAACAGAAATTCGAATTTCTATTATCCAGGGAAAGGAACGAGGA
ACGGTGCAAGCCACTTGGTGATGTTCATGTCATTGATGGCGATTGTGGCC
AGTCTTCTACTTCTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008498XLOC_008498Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015170-proteinTCONS_00015170-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015170-exon-sc0000205-1491911889:34267..34889TCONS_00015170-exon-sc0000205-1491911889:34267..34889Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1510915933:34267..34889TCONS_00015170-exon-sc0000205-1510915933:34267..34889Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1575043694:34267..34889TCONS_00015170-exon-sc0000205-1575043694:34267..34889Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1491911889:35442..35570TCONS_00015170-exon-sc0000205-1491911889:35442..35570Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1510915933:35442..35570TCONS_00015170-exon-sc0000205-1510915933:35442..35570Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1575043694:35442..35570TCONS_00015170-exon-sc0000205-1575043694:35442..35570Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1491911889:37013..37157TCONS_00015170-exon-sc0000205-1491911889:37013..37157Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1510915933:37013..37157TCONS_00015170-exon-sc0000205-1510915933:37013..37157Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1575043694:37013..37157TCONS_00015170-exon-sc0000205-1575043694:37013..37157Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1491911889:38175..38568TCONS_00015170-exon-sc0000205-1491911889:38175..38568Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1510915933:38175..38568TCONS_00015170-exon-sc0000205-1510915933:38175..38568Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1575043694:38175..38568TCONS_00015170-exon-sc0000205-1575043694:38175..38568Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1491911889:38894..39161TCONS_00015170-exon-sc0000205-1491911889:38894..39161Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1510915933:38894..39161TCONS_00015170-exon-sc0000205-1510915933:38894..39161Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1575043694:38894..39161TCONS_00015170-exon-sc0000205-1575043694:38894..39161Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1491911889:39599..40226TCONS_00015170-exon-sc0000205-1491911889:39599..40226Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1510915933:39599..40226TCONS_00015170-exon-sc0000205-1510915933:39599..40226Clytia hemisphaericaexon
TCONS_00015170-exon-sc0000205-1575043694:39599..40226TCONS_00015170-exon-sc0000205-1575043694:39599..40226Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205supercontigsc0000205:34267..40226 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.143489 0.0524718 0.182774 0.158948 0.145128 0.114682 0.345897 0.431766 0.559235 1.06714 1.23568 3.7628 20.0523 26.7584 1.52771 1.47552 16.2383 23.0335 0.877061 0.279325 2.16771 2.63911 0.102826 0.299149 0.385145 0.584346 4.86962 0.393711 1.25419 1.11556
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015170 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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