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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015017 ID=TCONS_00015017|Name=TCONS_00015017|organism=Clytia hemisphaerica|type=transcript|length=1635bp GTAATCACCTTTTTTTGACAGTATGATTTATTCTTCTTTCACGATGCTGA AAGGAGGAACGTTAATTCTACTTCTTTGGACAAATATTTCTTTGTCACAT ATTTTGAGATTGCCAGAATGCAATAATTATGAcgcaaagttttcaaaaat atcatacCATCAACGCTTAATTGgagatattttgaaaactttagaCTTTA TCTCACTGCGAAAATGTTTGACAAAATGTATGTGGCATCCGAGATGCCAA TCAGTGAATTTCAAGAGACAAAATGAAACTTGTGAGTTATTAGGTAATTC TTTACAAAGTAATTTAACAGGGAATGTTTTGTCTGTACCACAAACTGGAT GGATCCATTTTGAAACGGACTATGACGAAAAAACGTTGGGTCGATGGTGT AGCAATGGCAATAACAACCCTTGTAATATGATCACAGAACGTTGTGAAGA CAGATGCGTTGGCAATTATCAATGTGTCCAGCATGGTGAGCAATTACAGT CTTTAGTCCAGACGGCTACACAATCGTCTGATCATAAATCTGGCAATCAA CCAGCTGAACTTGCATTCGATGGGCTAGAAGACACACATTCCTGTACCAA CAGAGAACAGTACGCACCTCATTAGATCAAAGCAATATTCAATCAACGTG TTTTTATTGAGTATGTTATACTTGTCAATCGAGCTAATTTGATTGGTACA GAACACGGAGTTCGGAatgatttcattgattttttcactgttctgtATAT CGATGGACAAAGCATCAAAACCAAGTTTGGAAATACTGGGCATATCGTAG GGGGCCGGAAAACAATGCTTTGTCAAAAATATGCTGACGAGTTGTATGCA AATCAACCTGTTACTCAAGGACCTTACGGATATATGAATATTGCAGAGAT TTTGATTTACGGTCGTTCTGACTGAGAAAGTGCTCTCTCATTTTCAGTTC CTCAAGATATTGAAGATTGTAGGAACGATACTTCGATTCTTATGCATGGA ATTGCCCTTATTTACCTCTGAAAAGAACATCAAATGTCGAAAAACCCTAT CATCTGTTACAATACTCTTACCTATCAGATAGGTTGATAAATTGACTTAT CAAATATCGATTTCTGGCATTTTAGCAGTTATCGAGGTACGaataactaa aaatcgattcactcgaaaacggCAGGGGATTTGAGAGCAAATTTGTTTTG TCAATTCAAGGAATTATTATCTATTGTAGACATTGAaaggaaaaagctgg tttttgccgatttctcatGTGAAGCCTTTTCTGCAGTAAGCGCTTTAAGT AAAACAACCAGAAAAATTAGAAAGATAAGTTGCACAATGTCCACTAAATT TGCCCATATGCGCTGACTTTCgttttgcttgccattttcAACGAATATTC CCATCATTCTAACAAATTAAATTAGACTTGCTTCCGAAATTCAGGAAAGG CCTTAACCCTTCAAGTATCTTTCTATCTTTTTAGGAGGGGAAGCATCTTG ACTGGggggttggtattttacagacctgtCCGTATTTATATAGGGTTGAC TGTACTAAATAAATTACCTACACAGCTATatgttttcttataagcaagtg tctgtcactatatcaggctcgcattatgcttagca Run BLAST on NCBI protein sequence of TCONS_00015017-protein >TCONS_00015017-protein ID=TCONS_00015017-protein|Name=TCONS_00015017-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MIYSSFTMLKGGTLILLLWTNISLSHILRLPECNNYDAKFSKISYHQRLI GDILKTLDFISLRKCLTKCMWHPRCQSVNFKRQNETCELLGNSLQSNLTG NVLSVPQTGWIHFETDYDEKTLGRWCSNGNNNPCNMITERCEDRCVGNYQ CVQHGEQLQSLVQTATQSSDHKSGNQPAELAFDGLEDTHSCTNREQYAPH Run BLAST on NCBI transcript from alignment at sc0000203:19311..25526+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015017 ID=TCONS_00015017|Name=TCONS_00015017|organism=Clytia hemisphaerica|type=transcript|length=6216bp|location=Sequence derived from alignment at sc0000203:19311..25526+ (Clytia hemisphaerica) GTAATCACCTTTTTTTGACAGTATGATTTATTCTTCTTTCACGATGCTGA
AAGGAGGAACGTTAATTCTACTTCTTTGGACAAATATTTCTTTGTCACAT
ATTTTGAGATTGCCAGAATGCAATAATTATGAcgcaaagttttcaaaaat
atcatacCATCAACGCTTAATTGgagatattttgaaaactttagaCTTTA
TCTCACTGCGAAAATGTTTGACAAAATGTATGTGGCATCCGAGATGCCAA
TCAGTGAATTTCAAGAGACAAAATGAAACTTGTGAGTTATTAGGTAATTC
TTTACAAAGTAATTTAACAGGGAATGTTTTGTCTGTACCACAAACTGGAT
GGATCCATTTTGAAACGGACTATGACGAAAAAACGGTAAGTCTATTTTAA
AAACCAGTGATAAATTCGTAATTGAAGAAATTACTTATAAATAAcGTTTC
ATTGGCCAAAATTAATTATCAacgaatttaaaaaagttttttaattcgCC
AAAATGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNAGAAAGTCAACCATCCCATGATAtgacactcgtcccaagttaga
gccgttgacggtatgccggatatccaaaacaataacaatccatTATATGA
TATACACAATCATATGTCAATGTCATAaggcaatttcaattttttgcggt
actttcaaaatttcagaatttttgggcaCTTTCTTTGGATTCGCTTATCC
TTTTCTTGTCCTGGATCCAATCAAAACCTGCACGTAAAACATACCTCAAA
ATCAGTCACGTTTATAACATTATAACTCGGTCTTTGACGACTGGGAAGAT
TCAAcgacaaaattttgagagttaaagTAAAGTTTATCCCTCAGCGCATT
CAGTGATGAATCCGATCTGACCGTTAGTGTCTCTTCAGCCatttttgaga
tgaataaaatgaatcatgaaatttttgttatctaaagggatgggtgaaac
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAATGCGatcgaaaaaaat
ctttctcagCTGAATTCCATGATAGGGAATGTTTGTGAAGCTATTATAGT
CATTGTTTGCACCAATATAAAGTTACTTCAGCAAGTCATTAGTCTCCATC
AACAGCTTTCGAAAGCAGCGAAATCGACGAAACTACTTGAGTgaagtttg
taaacaaaaaagcaagTTTCACACATTCATTATGTTCAAAAAGTANNCGC
CTCGATTTTTGTCCCGACACGCACATCAActgcagcgcagcgagcggctc
cagaatttggctaatattgcataccaaaatttgatggtgatttaaaaaaa
cattagaatatTAAGTCAATTgtattatgggcatgaaatcctgaaaaata
caaatattgttttgggaatggatttttagcaagtatttgatcaattgaat
cacggTTCAGCACCCGAATTGAAATTTCACAGTTTAAGTAAGTTGTGAGC
AAGGAGTCgatgtttgtaggttttaaggagTAATagtgtattttgatttt
aacgtacagttttgaaaatatttaggtaccaatgATTTAATTGTAACATA
agtaactttgcagtgaatcactgttaAAAATTTGAGATACCAAATGGACT
ATTTCGCATAAAAAATTAttcgagaaaaataattttgtaggttttaaggg
gtatccactggtatttTGAAAATANGAAATGAttcgagaaaaataatttt
gtaggttttaaggggtatccactggtatttTGAAAATACACAACAGGTAC
CCTAGCATTAGTGGTACATATCCTCCACAACTGAGGCGAGAAGGATGAAG
GCACCATCTATAGTAAAAAAAGGGTGACTATGTGACAGGATACTTGAAAA
CTTCATAAAATACAatcaaatcttttcatctaGTTGGGTCGATGGTGTAG
CAATGGCAATAACAACCCTTGTAATATGATCACAGAACGTTGTGAAGACA
GATGCGTTGGCAATTATCAATGTGTCCAGCATGGTGGTAAGAAACAAAGT
ATTTTCGAGAACCTTTTCGGATAATTTCATGCGTCTCCGGGGAGAGGGAT
GGTACTAGGATTTAAATGAATTTCGtaaattttgtacattttctgACGTT
TTTGCCCTCCCTAAAGAGactatttccccaaaatttcatcaaaagttttc
aaattttagtccaaatttcaagaatttatgaccctttaaGAGAGTCAATT
TTTGTTCTCGTAatttacagagactcaatttgctttttaatggttttgta
accctttgaggaactttcgagggtgtgaaaaagggacccttatggctccc
GTTTTGCCTAAGTAGCCCCAACCCCCGGGTGCGTCTCACGAACAGTTTAG
AATCCCAACACTAAAAGCCTACATCCAAAAAAATGAGCAGAGCCCAAGAA
TCATGTAAATTATACGATTAAATATCATCTTAGCGATGCACCACAGAAAT
AAGTGATATTTTCATAGCGGAATTCTATTTAATCGAATAGAAAATTTGGA
GGAAACAAATTTGTttagggaactttttttggcgggaactaattttggcg
ggaactaattttggcgggcagcAAATGTCCTCAATTTTTTCAagtttggc
gggaacttattttggcgaatagttAGACTAGTATAGTCGTTGAATGAAAA
ACATCACACCGGAAAATCTTACTAGAGTGGTAAAATCGGGAAACCGTATC
TAGAACGATATTCTCAAATGTTATTTTCCTTCTCTCTCGCACACTAATTC
CCGTGTGAACGTTTTTCCGATTATACCTAGCCNGTTATTTTCCTTCTCTC
TCGCATGCTAATTCCCGTGTGAACGTTTTTCCGATTATACCTAGCCAGTA
CCCGACTCCTAAATTTTGTTGTGCACGGTAAATAACAGACTTGTTTACAA
GTCTagcgaatagtgaatttttttaatttttgtaggaactaattttggcg
aatgacagcgtaaatctgctctattttgccttattttgagcaattttgaa
gaatttcaggggttatttagacAAGGAAAGTTAGTTAAGTTACACAACTT
TGCATCGAAGATAAATCCGTGTTTCACAAAACGGCTAAGATGgctatttg
ataaatttttatttatgttGTCTTAAACatctaattcaatttttttcaga
atcTCTTCAATTATACATCAAAGATATCCAAGGATCTTCTACACACAATT
CTGGCAACTTCCCATTAAATGCTTCCCCTGGTTCCGCTGTGGATAAAGGC
CACACCCCTAGATTTCCAATTAACGTTCCCTTTCGCAAATCAACATCTta
gtaaaaattttatttgtcaGACAAAAATTTGACGAATTTTGGAGCCTGAC
ATAACAATTtgctacaatttttttcttaaaacaagcaatgataaaatgtt
tataaaaattctattaCAGAGCAATTACAGTCTTTAGTCCAGACGGCTAC
ACAATCGTCTGATCATAAATCTGGCAATCAACCAGCTGAACTTGCATTCG
ATGGGCTAGAAGACACACATTCCTGTACCAACAGAGAACAGTACGCACCT
CATTAGATCAAAGCAATATTCAATCAACGTGTTTTTATTGAGTATGTTAT
ACTTGTCAATCGAGCTAATTTGATTGGTACAGAACACGGAGTTCGGAatg
atttcattgattttttcactgttctgtATATCGATGGACAAAGCATCAAA
ACCAAGTTTGGAAATACTGGGCATATCGTAGGGGGCCGGAAAACAATGCT
TTGTCAAAAATATGCTGACGAGTTGTATGCAAATCAACCTGTTACTCAAG
GACCTTACGGATATATGAATATTGCAGAGATTTTGATTTACGGTCGTTCT
GACTGAGAAAGTGCTCTCTCATTTTCAGTTCCTCAAGATATTGAAGATTG
TAGGAACGATACTTCGATTCTTATGCATGGAATTGCCCTTATTTACCTCT
GAAAAGAACATCAAATGTCGAAAAACCCTATCATCTGTTACAATACTCTT
ACCTATCAGATAGGTTGATAAATTGACTTATCAAATATCGATTTCTGGCA
TTTTAGCAGTTATCGAGGTACGaataactaaaaatcgattcactcgaaaa
cggCAGGGGATTTGAGAGCAAATTTGTTTTGTCAATTCAAGGAATTATTA
TCTATTGTAGACATTGAaaggaaaaagctggtttttgccgatttctcatG
TGAAGCCTTTTCTGCAGTAAGCGCTTTAAGTAAAACAACCAGAAAAATTA
GAAAGATAAGTTGCACAATGTCCACTAAATTTGCCCATATGCGCTGACTT
TCgttttgcttgccattttcAACGAATATTCCCATCATTCTAACAAATTA
AATTAGACTTGCTTCCGAAATTCAGGAAAGGCCTTAACCCTTCAAGTATC
TTTCTATCTTTTTAGGAGGGGAAGCATCTTGACTGGggggttggtatttt
acagacctgtCCGTATTTATATAGGGTTGACTGTACTAAATAAATTACCT
ACACAGCTATatgttttcttataagcaagtgtctgtcactatatcaggct
cgcattatgcttagca Coding sequence (CDS) from alignment at sc0000203:19311..25526+ >TCONS_00015017 ID=TCONS_00015017|Name=TCONS_00015017|organism=Clytia hemisphaerica|type=CDS|length=1809bp|location=Sequence derived from alignment at sc0000203:19311..25526+ (Clytia hemisphaerica) ATGATTTATTCTTCTTTCACGATGCTGAAAGGAGGAACGTTAATTCTACT TCTTTGGACAAATATTTCTTTGTCACATATTTTGAGATTGCCAGAATGCA ATAATTATGAcgcaaagttttcaaaaatatcatacCATCAACGCTTAATT GgagatattttgaaaactttagaCTTTATCTCACTGCGAAAATGTTTGAC AAAATGTATGTGGCATCCGAGATGCCAATCAGTGAATTTCAAGAGACAAA ATGAAACTTGTGAGTTATTAGGTAATTCTTTACAAAGTAATTTAACAGGG AATGTTTTGTCTGTACCACAAACTGGATGGATCCATTTTGAAACGGACTA TGACGAAAAAACGTTGGGTCGATGGTGTAGCAATGGCAATAACAACCCTT GTAATATGATCACAGAACGTTGTGAAGACAGATGCGTTGGCAATTATCAA TGTGTCCAGCATGGTGAGCAATTACAGTCTTTAGTCCAGACGGCTACACA ATCGTCTGATCATAAATCTGGCAATCAACCAGCTGAACTTGCATTCGATG GGCTAGAAGACACACATTCCTGTACCAACAGAGAACAGTACGCACCTCAT TAGATGATTTATTCTTCTTTCACGATGCTGAAAGGAGGAACGTTAATTCT ACTTCTTTGGACAAATATTTCTTTGTCACATATTTTGAGATTGCCAGAAT GCAATAATTATGAcgcaaagttttcaaaaatatcatacCATCAACGCTTA ATTGgagatattttgaaaactttagaCTTTATCTCACTGCGAAAATGTTT GACAAAATGTATGTGGCATCCGAGATGCCAATCAGTGAATTTCAAGAGAC AAAATGAAACTTGTGAGTTATTAGGTAATTCTTTACAAAGTAATTTAACA GGGAATGTTTTGTCTGTACCACAAACTGGATGGATCCATTTTGAAACGGA CTATGACGAAAAAACGTTGGGTCGATGGTGTAGCAATGGCAATAACAACC CTTGTAATATGATCACAGAACGTTGTGAAGACAGATGCGTTGGCAATTAT CAATGTGTCCAGCATGGTGAGCAATTACAGTCTTTAGTCCAGACGGCTAC ACAATCGTCTGATCATAAATCTGGCAATCAACCAGCTGAACTTGCATTCG ATGGGCTAGAAGACACACATTCCTGTACCAACAGAGAACAGTACGCACCT CATTAGATGATTTATTCTTCTTTCACGATGCTGAAAGGAGGAACGTTAAT TCTACTTCTTTGGACAAATATTTCTTTGTCACATATTTTGAGATTGCCAG AATGCAATAATTATGAcgcaaagttttcaaaaatatcatacCATCAACGC TTAATTGgagatattttgaaaactttagaCTTTATCTCACTGCGAAAATG TTTGACAAAATGTATGTGGCATCCGAGATGCCAATCAGTGAATTTCAAGA GACAAAATGAAACTTGTGAGTTATTAGGTAATTCTTTACAAAGTAATTTA ACAGGGAATGTTTTGTCTGTACCACAAACTGGATGGATCCATTTTGAAAC GGACTATGACGAAAAAACGTTGGGTCGATGGTGTAGCAATGGCAATAACA ACCCTTGTAATATGATCACAGAACGTTGTGAAGACAGATGCGTTGGCAAT TATCAATGTGTCCAGCATGGTGAGCAATTACAGTCTTTAGTCCAGACGGC TACACAATCGTCTGATCATAAATCTGGCAATCAACCAGCTGAACTTGCAT TCGATGGGCTAGAAGACACACATTCCTGTACCAACAGAGAACAGTACGCA CCTCATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00015017-exon-sc0000203-1491911889:19311..19695 | TCONS_00015017-exon-sc0000203-1491911889:19311..19695 | Clytia hemisphaerica | exon |
| TCONS_00015017-exon-sc0000203-1510915933:19311..19695 | TCONS_00015017-exon-sc0000203-1510915933:19311..19695 | Clytia hemisphaerica | exon |
| TCONS_00015017-exon-sc0000203-1575043694:19311..19695 | TCONS_00015017-exon-sc0000203-1575043694:19311..19695 | Clytia hemisphaerica | exon |
| TCONS_00015017-exon-sc0000203-1491911889:22844..22946 | TCONS_00015017-exon-sc0000203-1491911889:22844..22946 | Clytia hemisphaerica | exon |
| TCONS_00015017-exon-sc0000203-1510915933:22844..22946 | TCONS_00015017-exon-sc0000203-1510915933:22844..22946 | Clytia hemisphaerica | exon |
| TCONS_00015017-exon-sc0000203-1575043694:22844..22946 | TCONS_00015017-exon-sc0000203-1575043694:22844..22946 | Clytia hemisphaerica | exon |
| TCONS_00015017-exon-sc0000203-1491911889:24380..25526 | TCONS_00015017-exon-sc0000203-1491911889:24380..25526 | Clytia hemisphaerica | exon |
| TCONS_00015017-exon-sc0000203-1510915933:24380..25526 | TCONS_00015017-exon-sc0000203-1510915933:24380..25526 | Clytia hemisphaerica | exon |
| TCONS_00015017-exon-sc0000203-1575043694:24380..25526 | TCONS_00015017-exon-sc0000203-1575043694:24380..25526 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000203 | supercontig | sc0000203:19311..25526 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
The following BLAST results are available for this feature:
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