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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014996 ID=TCONS_00014996|Name=TCONS_00014996|organism=Clytia hemisphaerica|type=transcript|length=1282bp
TTAATaggtcaatattttttttacgtGATAACTTTGAAGGAGTTTGGAGT
CAAAAAGTGAAGAGTGATTAGAATagtagaatttttttgattttgaaaat
ggaGAAGCCAAGTTGTGTTGTGGTAGATATACACGATTCAGACGATGTTG
CAAAGAATGAGAAAACATCAGTCGGTCGATGTGTGCAACAAAACGATAGA
GGAAAACTTTCCCTTGATTTCATGGAAGTTAAGCACAGAATGAAAGAACT
GGCGTTAACTCCTTCAACTTCTTCGAACGAAATCAACAAAGTAAAAACAT
TGGCTCAATTATTCGAGCATGGATCAGTGAGAGATTTAAGAACAGTCAAA
TCACCGGAACCGAAGTTAGAAGATAAAAGTTCGTCATCTGTTGCGTTGGA
AACGAGAACTCTTCAGGCGCCCTCTTTAGAATTACCTTCACTGAAAACGA
AAAGTGATGGAAATGGAAATTGCAACGCAAAGAAGAGTCTGGTTCTAAAC
ACGGAATTTCCGAAGGATTATCGATTGGTTCGCAAGAAGAAAGCGACCTG
GAAACGAGTGGCCGAACATTTCCACCTcgatgaaaaaagtagagttCAAA
ACAAGATGCTGCAAGTCATCAAATTATCAAAAGATGAAGATTTCGCAAAA
GCTCGTCAAGAAGTCTCTactaaaagtgaaagtgaaaaagaaTTAGAACG
AAAAAAGCAAACTCAGCGAGAAAATAAGGAACTAGCTTGCATTTTATTGG
GGTTAATGGTGGAAGCAGAACTACCCCTGAAATTCTACGAAATGATTGGC
CAATCGTTACGTGTTCGAAACATGGTTCGAAAATTGTTAGAAAATGGTAA
AAGTAAGGATTACGTCATACAATTGTTTGATGAAGACGGGGGTCAGAAAG
ACCTCACTGAAAACATCCCAGAAACTATGGTGTAAGGAGAAGTGTAGAAA
CAGGAGAAATCTTTTCTGCTGGTCGAGTTTGGTAACGTGACGACTGTAGC
CAATTGAAAGCATACTGGGAACGAGAATTCCTCAAGGGTTCATCCAAAAT
TAGATTTGCGAtagtaaaaagtaaaatacaaaatgaaaTGACAATATAAA
TTTAATATACGttgacaaaatttttcaaaatgaaaaaagttcAGTAGAAA
AGAAATAATGTATGTACATTCATCTATAAACTGACAAAAGACATTGTATG
ATATATTTGAATGTTAAATCAATTACGTTTCTCAAGTCTGTTTTGTAGTT
TACATGAACAAATTTCTTGGACGTATTATTTT Run BLAST on NCBI protein sequence of TCONS_00014996-protein >TCONS_00014996-protein ID=TCONS_00014996-protein|Name=TCONS_00014996-protein|organism=Clytia hemisphaerica|type=polypeptide|length=278bp
MEKPSCVVVDIHDSDDVAKNEKTSVGRCVQQNDRGKLSLDFMEVKHRMKE
LALTPSTSSNEINKVKTLAQLFEHGSVRDLRTVKSPEPKLEDKSSSSVAL
ETRTLQAPSLELPSLKTKSDGNGNCNAKKSLVLNTEFPKDYRLVRKKKAT
WKRVAEHFHLDEKSRVQNKMLQVIKLSKDEDFAKARQEVSTKSESEKELE
RKKQTQRENKELACILLGLMVEAELPLKFYEMIGQSLRVRNMVRKLLENG
KSKDYVIQLFDEDGGQKDLTENIPETMV Run BLAST on NCBI transcript from alignment at sc0000201:265637..266918 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014996 ID=TCONS_00014996|Name=TCONS_00014996|organism=Clytia hemisphaerica|type=transcript|length=1282bp|location=Sequence derived from alignment at sc0000201:265637..266918 (Clytia hemisphaerica)
AAAATAATACGTCCAAGAAATTTGTTCATGTAAACTACAAAACAGACTTG
AGAAACGTAATTGATTTAACATTCAAATATATCATACAATGTCTTTTGTC
AGTTTATAGATGAATGTACATACATTATTTCTTTTCTACTgaactttttt
cattttgaaaaattttgtcaaCGTATATTAAATTTATATTGTCAtttcat
tttgtattttactttttactaTCGCAAATCTAATTTTGGATGAACCCTTG
AGGAATTCTCGTTCCCAGTATGCTTTCAATTGGCTACAGTCGTCACGTTA
CCAAACTCGACCAGCAGAAAAGATTTCTCCTGTTTCTACACTTCTCCTTA
CACCATAGTTTCTGGGATGTTTTCAGTGAGGTCTTTCTGACCCCCGTCTT
CATCAAACAATTGTATGACGTAATCCTTACTTTTACCATTTTCTAACAAT
TTTCGAACCATGTTTCGAACACGTAACGATTGGCCAATCATTTCGTAGAA
TTTCAGGGGTAGTTCTGCTTCCACCATTAACCCCAATAAAATGCAAGCTA
GTTCCTTATTTTCTCGCTGAGTTTGCTTTTTTCGTTCTAAttctttttca
ctttcacttttagtAGAGACTTCTTGACGAGCTTTTGCGAAATCTTCATC
TTTTGATAATTTGATGACTTGCAGCATCTTGTTTTGaactctactttttt
catcgAGGTGGAAATGTTCGGCCACTCGTTTCCAGGTCGCTTTCTTCTTG
CGAACCAATCGATAATCCTTCGGAAATTCCGTGTTTAGAACCAGACTCTT
CTTTGCGTTGCAATTTCCATTTCCATCACTTTTCGTTTTCAGTGAAGGTA
ATTCTAAAGAGGGCGCCTGAAGAGTTCTCGTTTCCAACGCAACAGATGAC
GAACTTTTATCTTCTAACTTCGGTTCCGGTGATTTGACTGTTCTTAAATC
TCTCACTGATCCATGCTCGAATAATTGAGCCAATGTTTTTACTTTGTTGA
TTTCGTTCGAAGAAGTTGAAGGAGTTAACGCCAGTTCTTTCATTCTGTGC
TTAACTTCCATGAAATCAAGGGAAAGTTTTCCTCTATCGTTTTGTTGCAC
ACATCGACCGACTGATGTTTTCTCATTCTTTGCAACATCGTCTGAATCGT
GTATATCTACCACAACACAACTTGGCTTCtccattttcaaaatcaaaaaa
attctactATTCTAATCACTCTTCACTTTTTGACTCCAAACTCCTTCAAA
GTTATCacgtaaaaaaaatattgacctATTAA Coding sequence (CDS) from alignment at sc0000201:265637..266918 >TCONS_00014996 ID=TCONS_00014996|Name=TCONS_00014996|organism=Clytia hemisphaerica|type=CDS|length=837bp|location=Sequence derived from alignment at sc0000201:265637..266918 (Clytia hemisphaerica)
TTACACCATAGTTTCTGGGATGTTTTCAGTGAGGTCTTTCTGACCCCCGT
CTTCATCAAACAATTGTATGACGTAATCCTTACTTTTACCATTTTCTAAC
AATTTTCGAACCATGTTTCGAACACGTAACGATTGGCCAATCATTTCGTA
GAATTTCAGGGGTAGTTCTGCTTCCACCATTAACCCCAATAAAATGCAAG
CTAGTTCCTTATTTTCTCGCTGAGTTTGCTTTTTTCGTTCTAAttctttt
tcactttcacttttagtAGAGACTTCTTGACGAGCTTTTGCGAAATCTTC
ATCTTTTGATAATTTGATGACTTGCAGCATCTTGTTTTGaactctacttt
tttcatcgAGGTGGAAATGTTCGGCCACTCGTTTCCAGGTCGCTTTCTTC
TTGCGAACCAATCGATAATCCTTCGGAAATTCCGTGTTTAGAACCAGACT
CTTCTTTGCGTTGCAATTTCCATTTCCATCACTTTTCGTTTTCAGTGAAG
GTAATTCTAAAGAGGGCGCCTGAAGAGTTCTCGTTTCCAACGCAACAGAT
GACGAACTTTTATCTTCTAACTTCGGTTCCGGTGATTTGACTGTTCTTAA
ATCTCTCACTGATCCATGCTCGAATAATTGAGCCAATGTTTTTACTTTGT
TGATTTCGTTCGAAGAAGTTGAAGGAGTTAACGCCAGTTCTTTCATTCTG
TGCTTAACTTCCATGAAATCAAGGGAAAGTTTTCCTCTATCGTTTTGTTG
CACACATCGACCGACTGATGTTTTCTCATTCTTTGCAACATCGTCTGAAT
CGTGTATATCTACCACAACACAACTTGGCTTCtccat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014996-exon-sc0000201-1491911889:265637..266918 | TCONS_00014996-exon-sc0000201-1491911889:265637..266918 | Clytia hemisphaerica | exon |
| TCONS_00014996-exon-sc0000201-1510915933:265637..266918 | TCONS_00014996-exon-sc0000201-1510915933:265637..266918 | Clytia hemisphaerica | exon |
| TCONS_00014996-exon-sc0000201-1575043694:265637..266918 | TCONS_00014996-exon-sc0000201-1575043694:265637..266918 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000201 | supercontig | sc0000201:265637..266918 . |
Blast
The following BLAST results are available for this feature:
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