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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014993 ID=TCONS_00014993|Name=TCONS_00014993|organism=Clytia hemisphaerica|type=transcript|length=1490bp
ATTTTTAATGCAattattaagttttgaaaaatggtttccAACCCCCCTTC
GCTTATtaaaggttttgagaattttcgaCCGCCACCCCGCTTACTGCTta
ttagatacccgagagtagaggtttcaatttcaatatgtttaaatttcaaa
acatcaaaTATCAATGTAAAATAATCCAGTTTTTCTTTGTAAAGGAGGAg
ttctaattttttaaataaattatttaCATTCTTGTTTAGAAGTGAGAAAT
TGGTTTTCCAAAAGAATGATTCAATTATACCATGAATGTTTATTCAAAGG
GGACCttcgatgaaaatgaaaataaaaatcattgAGAATATTGAAATGAA
ATCTAACAAGTAGACGACCATTTGAAGAAGAAGTATGGCCTTTCTGAACG
ACTCGTTAAACGGAAGTTTCGTGACGAAAAGTGAAGATTTAGAGAAATTC
AATGGGATCATTAACAAATTTGTCATACCATCTTTGATGATGATAATTGG
TGTACCAAGTAACCTCTTGATCATCACTTACTTCATCAGAATCCATTGCA
GGAGATTGAGCAAGATGAGCTCTTACCATCTGCTTCTCATCAATTTGGCT
GTGGCGGACTTGTTAACATGTCTTGGCGTGGCTGTCATGTTTTACGAATG
GTCAAAACCATCATGGGGTCTGGGCATGTTCGGTTGTCGCATCATCTCTC
CATTTTCGACATTAGTCAGCCCCATGGCGTCATGCTGGTTGTTAGTACTC
TTGTCATACGCTAGGTATAGAGACATCACTCAACCCTTTGCTGTGAAGCT
GACTAAAATGAAATATACATTCTTCTGTTTGTTGATATGGTTACTATCTT
CAGCAAGTGGGATATTTCTTTATCATTTCATCCGTTTAATTACACTGTCC
GATGGGACGTTCATTTGTGGGATGATTTTCCAAGGCGAAGAGGAGCTTTA
TGGAAGATTATTTTACATAGTAATCGACTCAATCATTCCAATAACCCTCA
TGGTAAATCTCTATCATCGTATACGAAGATCGATCAAATCAAATGCACCG
TCTTCCAACGACTTTCCCTTAAGTGAGGCGAGTCGGCAGAGAAATAATAC
AGCGTTGAAGACATTACGTAATCTAATTGCTGTGTATATGATTACTATTT
GTCCTGGTCGTCTCTATAATTTATTTCACATGTTGATATGGGCAGTGGAC
GAAGAATTAGTTAAAAACCATTGGTTTAgcaatttgtattttttcttctt
cgcaTATCACTATTTGAACAATGCAATTAACATTTTCGTCTACGCAAAAC
TTATGGAAGACTTCAGAAGGTTTCTGTTGAACTGTTTCACTTGTGGTCGG
TTAAAGCAGAAACCAACATTGGGTGAAAACTGTTCCACTATAACATAGAG
CTAAGTgcttttaatgatatttttggaaagtacaAAAAGGAAGCCCCGAA
ATTCTATCATTTCCAATATTCTTTATCAACCTTCAACTTT Run BLAST on NCBI protein sequence of TCONS_00014993-protein >TCONS_00014993-protein ID=TCONS_00014993-protein|Name=TCONS_00014993-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MAFLNDSLNGSFVTKSEDLEKFNGIINKFVIPSLMMIIGVPSNLLIITYF
IRIHCRRLSKMSSYHLLLINLAVADLLTCLGVAVMFYEWSKPSWGLGMFG
CRIISPFSTLVSPMASCWLLVLLSYARYRDITQPFAVKLTKMKYTFFCLL
IWLLSSASGIFLYHFIRLITLSDGTFICGMIFQGEEELYGRLFYIVIDSI
IPITLMVNLYHRIRRSIKSNAPSSNDFPLSEASRQRNNTALKTLRNLIAV
YMITICPGRLYNLFHMLIWAVDEELVKNHWFSNLYFFFFAYHYLNNAINI
FVYAKLMEDFRRFLLNCFTCGRLKQKPTLGENCSTIT Run BLAST on NCBI transcript from alignment at sc0000201:215112..216601 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014993 ID=TCONS_00014993|Name=TCONS_00014993|organism=Clytia hemisphaerica|type=transcript|length=1490bp|location=Sequence derived from alignment at sc0000201:215112..216601 (Clytia hemisphaerica)
AAAGTTGAAGGTTGATAAAGAATATTGGAAATGATAGAATTTCGGGGCTT
CCTTTTtgtactttccaaaaatatcattaaaagcACTTAGCTCTATGTTA
TAGTGGAACAGTTTTCACCCAATGTTGGTTTCTGCTTTAACCGACCACAA
GTGAAACAGTTCAACAGAAACCTTCTGAAGTCTTCCATAAGTTTTGCGTA
GACGAAAATGTTAATTGCATTGTTCAAATAGTGATAtgcgaagaagaaaa
aatacaaattgcTAAACCAATGGTTTTTAACTAATTCTTCGTCCACTGCC
CATATCAACATGTGAAATAAATTATAGAGACGACCAGGACAAATAGTAAT
CATATACACAGCAATTAGATTACGTAATGTCTTCAACGCTGTATTATTTC
TCTGCCGACTCGCCTCACTTAAGGGAAAGTCGTTGGAAGACGGTGCATTT
GATTTGATCGATCTTCGTATACGATGATAGAGATTTACCATGAGGGTTAT
TGGAATGATTGAGTCGATTACTATGTAAAATAATCTTCCATAAAGCTCCT
CTTCGCCTTGGAAAATCATCCCACAAATGAACGTCCCATCGGACAGTGTA
ATTAAACGGATGAAATGATAAAGAAATATCCCACTTGCTGAAGATAGTAA
CCATATCAACAAACAGAAGAATGTATATTTCATTTTAGTCAGCTTCACAG
CAAAGGGTTGAGTGATGTCTCTATACCTAGCGTATGACAAGAGTACTAAC
AACCAGCATGACGCCATGGGGCTGACTAATGTCGAAAATGGAGAGATGAT
GCGACAACCGAACATGCCCAGACCCCATGATGGTTTTGACCATTCGTAAA
ACATGACAGCCACGCCAAGACATGTTAACAAGTCCGCCACAGCCAAATTG
ATGAGAAGCAGATGGTAAGAGCTCATCTTGCTCAATCTCCTGCAATGGAT
TCTGATGAAGTAAGTGATGATCAAGAGGTTACTTGGTACACCAATTATCA
TCATCAAAGATGGTATGACAAATTTGTTAATGATCCCATTGAATTTCTCT
AAATCTTCACTTTTCGTCACGAAACTTCCGTTTAACGAGTCGTTCAGAAA
GGCCATACTTCTTCTTCAAATGGTCGTCTACTTGTTAGATTTCATTTCAA
TATTCTcaatgatttttattttcattttcatcgaaGGTCCCCTTTGAATA
AACATTCATGGTATAATTGAATCATTCTTTTGGAAAACCAATTTCTCACT
TCTAAACAAGAATGtaaataatttatttaaaaaattagaacTCCTCCTTT
ACAAAGAAAAACTGGATTATTTTACATTGATAtttgatgttttgaaattt
aaacatattgaaattgaaacctctactctcgggtatctaataAGCAGTAA
GCGGGGTGGCGGtcgaaaattctcaaaacctttaATAAGCGAAGGGGGGT
TggaaaccatttttcaaaacttaataatTGCATTAAAAAT Coding sequence (CDS) from alignment at sc0000201:215112..216601 >TCONS_00014993 ID=TCONS_00014993|Name=TCONS_00014993|organism=Clytia hemisphaerica|type=CDS|length=1014bp|location=Sequence derived from alignment at sc0000201:215112..216601 (Clytia hemisphaerica)
CTATGTTATAGTGGAACAGTTTTCACCCAATGTTGGTTTCTGCTTTAACC
GACCACAAGTGAAACAGTTCAACAGAAACCTTCTGAAGTCTTCCATAAGT
TTTGCGTAGACGAAAATGTTAATTGCATTGTTCAAATAGTGATAtgcgaa
gaagaaaaaatacaaattgcTAAACCAATGGTTTTTAACTAATTCTTCGT
CCACTGCCCATATCAACATGTGAAATAAATTATAGAGACGACCAGGACAA
ATAGTAATCATATACACAGCAATTAGATTACGTAATGTCTTCAACGCTGT
ATTATTTCTCTGCCGACTCGCCTCACTTAAGGGAAAGTCGTTGGAAGACG
GTGCATTTGATTTGATCGATCTTCGTATACGATGATAGAGATTTACCATG
AGGGTTATTGGAATGATTGAGTCGATTACTATGTAAAATAATCTTCCATA
AAGCTCCTCTTCGCCTTGGAAAATCATCCCACAAATGAACGTCCCATCGG
ACAGTGTAATTAAACGGATGAAATGATAAAGAAATATCCCACTTGCTGAA
GATAGTAACCATATCAACAAACAGAAGAATGTATATTTCATTTTAGTCAG
CTTCACAGCAAAGGGTTGAGTGATGTCTCTATACCTAGCGTATGACAAGA
GTACTAACAACCAGCATGACGCCATGGGGCTGACTAATGTCGAAAATGGA
GAGATGATGCGACAACCGAACATGCCCAGACCCCATGATGGTTTTGACCA
TTCGTAAAACATGACAGCCACGCCAAGACATGTTAACAAGTCCGCCACAG
CCAAATTGATGAGAAGCAGATGGTAAGAGCTCATCTTGCTCAATCTCCTG
CAATGGATTCTGATGAAGTAAGTGATGATCAAGAGGTTACTTGGTACACC
AATTATCATCATCAAAGATGGTATGACAAATTTGTTAATGATCCCATTGA
ATTTCTCTAAATCTTCACTTTTCGTCACGAAACTTCCGTTTAACGAGTCG
TTCAGAAAGGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014993-exon-sc0000201-1491911889:215112..216601 | TCONS_00014993-exon-sc0000201-1491911889:215112..216601 | Clytia hemisphaerica | exon |
| TCONS_00014993-exon-sc0000201-1510915933:215112..216601 | TCONS_00014993-exon-sc0000201-1510915933:215112..216601 | Clytia hemisphaerica | exon |
| TCONS_00014993-exon-sc0000201-1575043694:215112..216601 | TCONS_00014993-exon-sc0000201-1575043694:215112..216601 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000201 | supercontig | sc0000201:215112..216601 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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