TCONS_00014963 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014963
Unique NameTCONS_00014963
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2653

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014963 ID=TCONS_00014963|Name=TCONS_00014963|organism=Clytia hemisphaerica|type=transcript|length=2653bp
ctatACTCAAAGTAATCATTGCCggatattttcaaaacatttgtgTTTGC
AATGACCCTTGTTTTATCAACGCAGGCTATTCCATGCTGACCCCCTCAAA
TTACGGTCCCATGTCGACTCATCGTTCTGATTCGGTGAACTTATTGAAAG
TCGTGCTCAACAATGATTCTACCCTAAAATATACAGGAGATATATCGAAG
AACACTGCTGTCATTTTTCACTCACTCATAGAACCGGTGGAGAGACAAAT
CCTGATGAAAACAACGAGTCGCATCAAACCTGAATGGATTGAAGAGGTGT
CAAGTGAACGGTGGCAAAAAAGTGTTAATTTCAAATTCGAGAATGGGGAA
ATCAAAAGCCTCCTTGAAAATCGATCACGAGAAAATATAGGTGACAGCAT
TTTGAGTAAAATGAAGAGAGAAGCTGTTGACggcaaaacaaaggaaattt
ctaAACTGAAGCACATCAAAATCGAATCCAACATTGCCATCAAAATTTCT
TCGCACAGTTCAGAAGTCAAAGTATATGGTTCGAAGAAGGAGGTGGAACA
AGCGTGGTGGAAGATCGAAGAAATGTTTGCAAAGTGTTATCGTGAGGTTT
ACAGCTCAGATCAAGTGCGAAATTATCCAAACAGGGAAGgagctgacaaa
atatgcaaaatAAAGACATGTCTTGTCATCACGGAAGAGCCTGAGTTACC
TCGCCCTGCAATCACACAGAACTTCGATGAATGGTATTCACAACGGCTTG
TTTTGAATAATaaagaacacaagattcaggaTACACAGATCGCTAAAATG
TTGTCAACACTAAAAGAAGATCTACAAGATGATTTGAAAACATCATACGA
AGAACCAAAGATCCTTTGCATATCAATTTCTCTGGTTAAGATCAAATTCA
AGAGTACAGATTTGTCAAGAGAATACGAGAAGTTATTGAATGTCAACACA
TCGAGTGAGCAATACTCTCCCATTAAAAGGATACAAGAATTCTTTGAAGG
AGACACGAAAGCCTTCTTGGACCAGGAGCTGGAGCTTCGTGTTAAGAATA
CTAATTTATACCCATCAGTACGAGAGCTCACTGAGTCATACCAAGACATA
GAACTGGTGGTAGGACAAAAGAATGACCTTTTTCGTCTCAAGAAAGACAA
AGAGAATCGTAAAGGAGGCAACTTTCAGAACAAACTAGACGAAGTCATCG
CAAAGTTGAAAGATCAAAAAgtATTTGGGAGTGAGATGATAGAGTTGACA
GGCGGAGAATTCTTGGAAAGAGGAGAAAGGGCCTTCGTTTACTGGAAAAT
CAAAGAGATGATCAAAGAAGAAGACTTGCAACAAAAAGAGAACGTTATCG
TGCATCACCGAAAGTATCCCTTGATGATGTTCGAAGTTTTCGGTGAATAT
GAAAAACGAATGAAAGTCGCGAACCAAATACACCGAAAAATCGAATCATT
GAAGATACGACGAAAAAGCAAAGTTTTCAATGAGCACATTCCAATCCACA
GTTCAAGATCTATGAAATTGATTCATCAGAAAATTCAAAGCTTACGTGAA
CAAAACCCAGATGTTCAAATTGCATTAAGGCTTGATGAACAAACAGAAAA
TAAGCATCTACCCAGCATTCATTTCATTTGCGAAGGTGATAACAAAAGGA
GGAATATTGAAGCAGAAATTAAAACTTTACTACAAGATGGTTTACAACAA
AAACAATTTGATTCAGATACACACCAATGTTGTCTTTGCTACCAGCATGT
TGTTTTGCCCAAAACTGCAAATCAGAAATTCAAAGAACGAGAAGAAGTTA
AACAAGCACAGAGCCAGAATGAACCAATGTATGGCGAGAAAAATTTATCA
CGTGACCCAGATGGGCGAATCAGAGAGAAGAGCGTTCGGATACAACATCA
AGCGGGGAACGAAGGAAGACGACTAATCTTATGTGGTTGCATCGTGTGTA
GAGAGTGCTTCGAATGGTACATCAACGAGTGCCTGGATATTCAGAAAGag
AAAAAGCTACATGACGACATAAAATGCCCAGGATGCAAAGGTGTAGTGAT
GATAAAAGATCTGGGGATGCTTGCATTTAGTGCAAAGGAAAAAATATGCG
AAAAAATCTTGACTAATTATCTTCAAAGGCTTGTAATGGATGGAAAGGAG
AAAATCGATGCGTGTGCAGTATGCAGAGCTATTTACGTCTTTGATATTGA
CGACAAAGGTATTTACCGATGCAGAAATAGTAAATGTCGATTGTTGTCGT
GCAGTGTATGTAAAAAGCAAGTCATGGGCAATAACAAACTAGACTTTGAG
CAACATCGTATATGCTGGGAATGAGTACTTTCAatcatttcaaatttcca
tAACTTGTGCCCTAAAGGAAAAAATGGGTAATAAAAGAGGAGATCTCCGA
AAACTATATCACCTGTAACTGGAAAGTAGGCTTTTTGGTTTGGTTCTACC
TCTTGGCAGGCTTCTGCTCATCATCTAACAatatatacttttttataagc
aactcaaATTTTCGGGTCAGCactggggttgcttagcattcaaactcatt
ttctgaaaaatttgctttgaccaaCTCTGATATGTTGTACTAAATTTATG
attattgggtcaagggctattGTCTGTCATAGTTAGATTAtccaaaaagc
ttt
Run BLAST on NCBI

protein sequence of TCONS_00014963-protein

>TCONS_00014963-protein ID=TCONS_00014963-protein|Name=TCONS_00014963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=773bp
ILKVIIAGYFQNICVCNDPCFINAGYSMLTPSNYGPMSTHRSDSVNLLKV
VLNNDSTLKYTGDISKNTAVIFHSLIEPVERQILMKTTSRIKPEWIEEVS
SERWQKSVNFKFENGEIKSLLENRSRENIGDSILSKMKREAVDGKTKEIS
KLKHIKIESNIAIKISSHSSEVKVYGSKKEVEQAWWKIEEMFAKCYREVY
SSDQVRNYPNREGADKICKIKTCLVITEEPELPRPAITQNFDEWYSQRLV
LNNKEHKIQDTQIAKMLSTLKEDLQDDLKTSYEEPKILCISISLVKIKFK
STDLSREYEKLLNVNTSSEQYSPIKRIQEFFEGDTKAFLDQELELRVKNT
NLYPSVRELTESYQDIELVVGQKNDLFRLKKDKENRKGGNFQNKLDEVIA
KLKDQKVFGSEMIELTGGEFLERGERAFVYWKIKEMIKEEDLQQKENVIV
HHRKYPLMMFEVFGEYEKRMKVANQIHRKIESLKIRRKSKVFNEHIPIHS
SRSMKLIHQKIQSLREQNPDVQIALRLDEQTENKHLPSIHFICEGDNKRR
NIEAEIKTLLQDGLQQKQFDSDTHQCCLCYQHVVLPKTANQKFKEREEVK
QAQSQNEPMYGEKNLSRDPDGRIREKSVRIQHQAGNEGRRLILCGCIVCR
ECFEWYINECLDIQKEKKLHDDIKCPGCKGVVMIKDLGMLAFSAKEKICE
KILTNYLQRLVMDGKEKIDACAVCRAIYVFDIDDKGIYRCRNSKCRLLSC
SVCKKQVMGNNKLDFEQHRICWE
Run BLAST on NCBI

transcript from alignment at sc0000201:191681..194968-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014963 ID=TCONS_00014963|Name=TCONS_00014963|organism=Clytia hemisphaerica|type=transcript|length=3288bp|location=Sequence derived from alignment at sc0000201:191681..194968- (Clytia hemisphaerica)
CTATACTCAAAGTAATCATTGCCGGATATTTTCAAAACATTTGTGTTTGC AATGACCCTTGTTTTATCAACGCAGGCTATTCCATGCTGACCCCCTCAAA TTACGGTCCCATGTCGACTCATCGTTCTGATTCGGTGAACTTATTGAAAG TCGTGCTCAACAATGATTCTACCCTAAAATATACAGGAGATATATCGAAG AACACTGCTGTCATTTTTCACTCACTCATAGAACCGGTGGAGAGACAAAT CCTGATGAAAACAACGAGTCGCATCAAACCTGAATGGATTGAAGAGGTGT CAAGTGAACGGTGGCAAAAAAGTGTTAATTTCAAATTCGAGAATGGGGAA ATCAAAAGCCTCCTTGAAAATCGATCACGAGAAAATATAGGTGACAGCAT TTTGAGTAAAATGAAGAGAGAAGCTGTTGACGGCAAAACAAAGGAAATTT CTAAACTGAAGCACATCAAAATCGAATCCAACATTGCCATCAAAATTTCT TCGCACAGTTCAGAAGTCAAAGTATATGGTTCGAAGAAGGAGGTGGAACA AGCGTGGTGGAAGATCGAAGAAATGTTTGCAAAGTGTTATCGTGAGGTTT ACAGCTCAGATCAAGTGCGAAATTATCCAAACAGGGAAGGAGCTGACAAA ATATGCAAAATAAAGACATGTCTTGTCATCACGGAAGAGCCTGAGTTACC TCGCCCTGCAATCACACAGAACTTCGATGAATGGTATTCACAACGGCTTG TTTTGAATAATAAAGAACACAAGATTCAGGATACACAGATCGCTAAAATG TTGTCAACACTAAAAGAAGATCTACAAGATGATTTGAAAACATCATACGA AGAACCAAAGATCCTTTGCATATCAATTTCTCTGGTTAAGATCAAATTCA AGAGTACAGATTTGTCAAGAGAATACGAGAAGTTATTGAATGTCAACACA TCGAGTGAGCAATACTCTCCCATTAAAAGGATACAAGAATTCTTTGAAGG AGACACGAAAGCCTTCTTGGACCAGGAGCTGGAGCTTCGTGTTAAGAATA CTAATTTATACCCATCAGTACGAGAGCTCACTGAGTCATACCAAGACATA GAACTGGTGGTAGGACAAAAGAATGACCTTTTTCGTCTCAAGAAAGACAA AGAGAATCGTAAAGGAGGCAACTTTCAGAACAAACTAGACGAAGTCATCG CAAAGTTGAAAGATCAAAAAGTACTAAGCTATTCTTTCTTTTACAGATNA GTCATCGCAAAGTTGAAAGAGCAAAAAGTACTAAGCTATTCTTTCTTTTA CAGATTGTCGAGGTTTTCACTTTCATTTACAAAATTTAAATTTCTCCCAG ATATTAAAGCTAATAAAAAAACAATTGAAAGTAACATTTTCTGAAGGCCA ATTATTCAGGATTCTAGGATCTGAATTAATCCTGATGAGTAATTTATAAA AATGCATTTCTTCTTTCTTTCTTACTTTTTTAGGTATTTGGGAGTGAGAT GATAGAGTTGACAGGCGGAGAATTCTTGGAAAGAGGAGAAAGGGCCTTCG TTTACTGGAAAATCAAAGAGATGATCAAAGAAGAAGACTTGCAACAAAAA GAGAACGTTATCGTGCATCACCGAAAGTATCCCTTGATGATGTTCGAAGT TTTCGGTGAATATGAAAAACGAATGAAAGTCGCGAACCAAATACACCGAA AAATCGAATCATTGAAGATACGACGAAAAAGCAAAGTTTTCAATGAGCAC ATTCCAATCCACAGTTCAAGATCTATGAAATTGATTCATCAGAAAATTCA AAGCTTACGTGAACAAAACCCAGATGTTCAAATTGCATTAAGGCTTGATG AACAAACAGAAAATAAGCATCTACCCAGCATTCATTTCATTTGCGAAGGT GATAACAAAAGGAGGAATATTGAAGCAGAAATTAAAACTTTACTACAAGA TGGTTTACAACAAAAACAATTTGATTCAGATACACACCAATGTTGTCTTT GCTACCAGCATGTTGTTTTGCCCAAAACTGCAAATCAGAAATTCAAAGAA CGAGAAGAAGTTAAACAAGCACAGAGCCAGAATGAACCAATGTATGGCGA GAAAAATTTATCACGTGACCCAGATGGGCGAATCAGAGAGAAGAGCGTTC GGATACAACATCAAGCGGGGAACGAAGGAAGACGACTAATCTTATGTGGT TGCATCGTGTGTAGAGAGTGCTTCGAATGGTACATCAACGAGTGCCTGGA TATTCAGAAAGGTAGGTCGTTTATTTTGTTCTGACCTGGGATAGTTCAAA CACTTAGAATGAAGAAACAATAGCGAAAATCGACTGTTGAAATGACGTGT CTGATTGTGGCTGACGAAACTGAATTGAAATTTACTTGCATCTGTCATGC ATCCTAATTTGTGATAAAATAGAAAAATGGGAAGTTTTAGTTAGAAAAAT ATTAAGGTTTCTTTTTCCTTTTTTGAAAAAATGCTAACCGACAAGCGGAC TGCATAAATTTGGGTTACTTTGACAATTAAAAACTTTTTTATCCAAAAAA TGACTTCCAGCTTATGAGTTACTCTACATCATAGTGGCAAAGTTTTTGAC ATTGACAGTTCCTTTTTTTAAAATCATTTTTAGAGAAAAAGCTACATGAC GACATAAAATGCCCAGGATGCAAAGGTGTAGTGATGATAAAAGATCTGGG GATGCTTGCATTTAGTGCAAAGGAAAAAATATGCGAAAAAATCTTGACTA ATTATCTTCAAAGGCTTGTAATGGATGGAAAGGAGAAAATCGATGCGTGT GCAGTATGCAGAGCTATTTACGTCTTTGATATTGACGACAAAGGTATTTA CCGATGCAGAAATAGTAAATGTCGATTGTTGTCGTGCAGTGTATGTAAAA AGCAAGTCATGGGCAATAACAAACTAGACTTTGAGCAACATCGTATATGC TGGGAATGAGTACTTTCAATCATTTCAAATTTCCATAACTTGTGCCCTAA AGGAAAAAATGGGTAATAAAAGAGGAGATCTCCGAAAACTATATCACCTG TAACTGGAAAGTAGGCTTTTTGGTTTGGTTCTACCTCTTGGCAGGCTTCT GCTCATCATCTAACAATATATACTTTTTTATAAGCAACTCAAATTTTCGG GTCAGCACTGGGGTTGCTTAGCATTCAAACTCATTTTCTGAAAAATTTGC TTTGACCAACTCTGATATGTTGTACTAAATTTATGATTATTGGGTCAAGG GCTATTGTCTGTCATAGTTAGATTATCCAAAAAGCTTT

Coding sequence (CDS) from alignment at sc0000201:191681..194968-

>TCONS_00014963 ID=TCONS_00014963|Name=TCONS_00014963|organism=Clytia hemisphaerica|type=CDS|length=6966bp|location=Sequence derived from alignment at sc0000201:191681..194968- (Clytia hemisphaerica)
AGAAAAAGCTACATGACGACATAAAATGCCCAGGATGCAAAGGTGTAGTG
ATGATAAAAGATCTGGGGATGCTTGCATTTAGTGCAAAGGAAAAAATATG
CGAAAAAATCTTGACTAATTATCTTCAAAGGCTTGTAATGGATGGAAAGG
AGAAAATCGATGCGTGTGCAGTATGCAGAGCTATTTACGTCTTTGATATT
GACGACAAAGGTATTTACCGATGCAGAAATAGTAAATGTCGATTGTTGTC
GTGCAGTGTATGTAAAAAGCAAGTCATGGGCAATAACAAACTAGACTTTG
AGCAACATCGTATATGCTGGGAATGAGTATTTGGGAGTGAGATGATAGAG
TTGACAGGCGGAGAATTCTTGGAAAGAGGAGAAAGGGCCTTCGTTTACTG
GAAAATCAAAGAGATGATCAAAGAAGAAGACTTGCAACAAAAAGAGAACG
TTATCGTGCATCACCGAAAGTATCCCTTGATGATGTTCGAAGTTTTCGGT
GAATATGAAAAACGAATGAAAGTCGCGAACCAAATACACCGAAAAATCGA
ATCATTGAAGATACGACGAAAAAGCAAAGTTTTCAATGAGCACATTCCAA
TCCACAGTTCAAGATCTATGAAATTGATTCATCAGAAAATTCAAAGCTTA
CGTGAACAAAACCCAGATGTTCAAATTGCATTAAGGCTTGATGAACAAAC
AGAAAATAAGCATCTACCCAGCATTCATTTCATTTGCGAAGGTGATAACA
AAAGGAGGAATATTGAAGCAGAAATTAAAACTTTACTACAAGATGGTTTA
CAACAAAAACAATTTGATTCAGATACACACCAATGTTGTCTTTGCTACCA
GCATGTTGTTTTGCCCAAAACTGCAAATCAGAAATTCAAAGAACGAGAAG
AAGTTAAACAAGCACAGAGCCAGAATGAACCAATGTATGGCGAGAAAAAT
TTATCACGTGACCCAGATGGGCGAATCAGAGAGAAGAGCGTTCGGATACA
ACATCAAGCGGGGAACGAAGGAAGACGACTAATCTTATGTGGTTGCATCG
TGTGTAGAGAGTGCTTCGAATGGTACATCAACGAGTGCCTGGATATTCAG
AAAGATACTCAAAGTAATCATTGCCGGATATTTTCAAAACATTTGTGTTT
GCAATGACCCTTGTTTTATCAACGCAGGCTATTCCATGCTGACCCCCTCA
AATTACGGTCCCATGTCGACTCATCGTTCTGATTCGGTGAACTTATTGAA
AGTCGTGCTCAACAATGATTCTACCCTAAAATATACAGGAGATATATCGA
AGAACACTGCTGTCATTTTTCACTCACTCATAGAACCGGTGGAGAGACAA
ATCCTGATGAAAACAACGAGTCGCATCAAACCTGAATGGATTGAAGAGGT
GTCAAGTGAACGGTGGCAAAAAAGTGTTAATTTCAAATTCGAGAATGGGG
AAATCAAAAGCCTCCTTGAAAATCGATCACGAGAAAATATAGGTGACAGC
ATTTTGAGTAAAATGAAGAGAGAAGCTGTTGACGGCAAAACAAAGGAAAT
TTCTAAACTGAAGCACATCAAAATCGAATCCAACATTGCCATCAAAATTT
CTTCGCACAGTTCAGAAGTCAAAGTATATGGTTCGAAGAAGGAGGTGGAA
CAAGCGTGGTGGAAGATCGAAGAAATGTTTGCAAAGTGTTATCGTGAGGT
TTACAGCTCAGATCAAGTGCGAAATTATCCAAACAGGGAAGGAGCTGACA
AAATATGCAAAATAAAGACATGTCTTGTCATCACGGAAGAGCCTGAGTTA
CCTCGCCCTGCAATCACACAGAACTTCGATGAATGGTATTCACAACGGCT
TGTTTTGAATAATAAAGAACACAAGATTCAGGATACACAGATCGCTAAAA
TGTTGTCAACACTAAAAGAAGATCTACAAGATGATTTGAAAACATCATAC
GAAGAACCAAAGATCCTTTGCATATCAATTTCTCTGGTTAAGATCAAATT
CAAGAGTACAGATTTGTCAAGAGAATACGAGAAGTTATTGAATGTCAACA
CATCGAGTGAGCAATACTCTCCCATTAAAAGGATACAAGAATTCTTTGAA
GGAGACACGAAAGCCTTCTTGGACCAGGAGCTGGAGCTTCGTGTTAAGAA
TACTAATTTATACCCATCAGTACGAGAGCTCACTGAGTCATACCAAGACA
TAGAACTGGTGGTAGGACAAAAGAATGACCTTTTTCGTCTCAAGAAAGAC
AAAGAGAATCGTAAAGGAGGCAACTTTCAGAACAAACTAGACGAAGTCAT
CGCAAAGTTGAAAGATCAAAAAAGAAAAAGCTACATGACGACATAAAATG
CCCAGGATGCAAAGGTGTAGTGATGATAAAAGATCTGGGGATGCTTGCAT
TTAGTGCAAAGGAAAAAATATGCGAAAAAATCTTGACTAATTATCTTCAA
AGGCTTGTAATGGATGGAAAGGAGAAAATCGATGCGTGTGCAGTATGCAG
AGCTATTTACGTCTTTGATATTGACGACAAAGGTATTTACCGATGCAGAA
ATAGTAAATGTCGATTGTTGTCGTGCAGTGTATGTAAAAAGCAAGTCATG
GGCAATAACAAACTAGACTTTGAGCAACATCGTATATGCTGGGAATGAGT
ATTTGGGAGTGAGATGATAGAGTTGACAGGCGGAGAATTCTTGGAAAGAG
GAGAAAGGGCCTTCGTTTACTGGAAAATCAAAGAGATGATCAAAGAAGAA
GACTTGCAACAAAAAGAGAACGTTATCGTGCATCACCGAAAGTATCCCTT
GATGATGTTCGAAGTTTTCGGTGAATATGAAAAACGAATGAAAGTCGCGA
ACCAAATACACCGAAAAATCGAATCATTGAAGATACGACGAAAAAGCAAA
GTTTTCAATGAGCACATTCCAATCCACAGTTCAAGATCTATGAAATTGAT
TCATCAGAAAATTCAAAGCTTACGTGAACAAAACCCAGATGTTCAAATTG
CATTAAGGCTTGATGAACAAACAGAAAATAAGCATCTACCCAGCATTCAT
TTCATTTGCGAAGGTGATAACAAAAGGAGGAATATTGAAGCAGAAATTAA
AACTTTACTACAAGATGGTTTACAACAAAAACAATTTGATTCAGATACAC
ACCAATGTTGTCTTTGCTACCAGCATGTTGTTTTGCCCAAAACTGCAAAT
CAGAAATTCAAAGAACGAGAAGAAGTTAAACAAGCACAGAGCCAGAATGA
ACCAATGTATGGCGAGAAAAATTTATCACGTGACCCAGATGGGCGAATCA
GAGAGAAGAGCGTTCGGATACAACATCAAGCGGGGAACGAAGGAAGACGA
CTAATCTTATGTGGTTGCATCGTGTGTAGAGAGTGCTTCGAATGGTACAT
CAACGAGTGCCTGGATATTCAGAAAGATACTCAAAGTAATCATTGCCGGA
TATTTTCAAAACATTTGTGTTTGCAATGACCCTTGTTTTATCAACGCAGG
CTATTCCATGCTGACCCCCTCAAATTACGGTCCCATGTCGACTCATCGTT
CTGATTCGGTGAACTTATTGAAAGTCGTGCTCAACAATGATTCTACCCTA
AAATATACAGGAGATATATCGAAGAACACTGCTGTCATTTTTCACTCACT
CATAGAACCGGTGGAGAGACAAATCCTGATGAAAACAACGAGTCGCATCA
AACCTGAATGGATTGAAGAGGTGTCAAGTGAACGGTGGCAAAAAAGTGTT
AATTTCAAATTCGAGAATGGGGAAATCAAAAGCCTCCTTGAAAATCGATC
ACGAGAAAATATAGGTGACAGCATTTTGAGTAAAATGAAGAGAGAAGCTG
TTGACGGCAAAACAAAGGAAATTTCTAAACTGAAGCACATCAAAATCGAA
TCCAACATTGCCATCAAAATTTCTTCGCACAGTTCAGAAGTCAAAGTATA
TGGTTCGAAGAAGGAGGTGGAACAAGCGTGGTGGAAGATCGAAGAAATGT
TTGCAAAGTGTTATCGTGAGGTTTACAGCTCAGATCAAGTGCGAAATTAT
CCAAACAGGGAAGGAGCTGACAAAATATGCAAAATAAAGACATGTCTTGT
CATCACGGAAGAGCCTGAGTTACCTCGCCCTGCAATCACACAGAACTTCG
ATGAATGGTATTCACAACGGCTTGTTTTGAATAATAAAGAACACAAGATT
CAGGATACACAGATCGCTAAAATGTTGTCAACACTAAAAGAAGATCTACA
AGATGATTTGAAAACATCATACGAAGAACCAAAGATCCTTTGCATATCAA
TTTCTCTGGTTAAGATCAAATTCAAGAGTACAGATTTGTCAAGAGAATAC
GAGAAGTTATTGAATGTCAACACATCGAGTGAGCAATACTCTCCCATTAA
AAGGATACAAGAATTCTTTGAAGGAGACACGAAAGCCTTCTTGGACCAGG
AGCTGGAGCTTCGTGTTAAGAATACTAATTTATACCCATCAGTACGAGAG
CTCACTGAGTCATACCAAGACATAGAACTGGTGGTAGGACAAAAGAATGA
CCTTTTTCGTCTCAAGAAAGACAAAGAGAATCGTAAAGGAGGCAACTTTC
AGAACAAACTAGACGAAGTCATCGCAAAGTTGAAAGATCAAAAAAGAAAA
AGCTACATGACGACATAAAATGCCCAGGATGCAAAGGTGTAGTGATGATA
AAAGATCTGGGGATGCTTGCATTTAGTGCAAAGGAAAAAATATGCGAAAA
AATCTTGACTAATTATCTTCAAAGGCTTGTAATGGATGGAAAGGAGAAAA
TCGATGCGTGTGCAGTATGCAGAGCTATTTACGTCTTTGATATTGACGAC
AAAGGTATTTACCGATGCAGAAATAGTAAATGTCGATTGTTGTCGTGCAG
TGTATGTAAAAAGCAAGTCATGGGCAATAACAAACTAGACTTTGAGCAAC
ATCGTATATGCTGGGAATGAGTATTTGGGAGTGAGATGATAGAGTTGACA
GGCGGAGAATTCTTGGAAAGAGGAGAAAGGGCCTTCGTTTACTGGAAAAT
CAAAGAGATGATCAAAGAAGAAGACTTGCAACAAAAAGAGAACGTTATCG
TGCATCACCGAAAGTATCCCTTGATGATGTTCGAAGTTTTCGGTGAATAT
GAAAAACGAATGAAAGTCGCGAACCAAATACACCGAAAAATCGAATCATT
GAAGATACGACGAAAAAGCAAAGTTTTCAATGAGCACATTCCAATCCACA
GTTCAAGATCTATGAAATTGATTCATCAGAAAATTCAAAGCTTACGTGAA
CAAAACCCAGATGTTCAAATTGCATTAAGGCTTGATGAACAAACAGAAAA
TAAGCATCTACCCAGCATTCATTTCATTTGCGAAGGTGATAACAAAAGGA
GGAATATTGAAGCAGAAATTAAAACTTTACTACAAGATGGTTTACAACAA
AAACAATTTGATTCAGATACACACCAATGTTGTCTTTGCTACCAGCATGT
TGTTTTGCCCAAAACTGCAAATCAGAAATTCAAAGAACGAGAAGAAGTTA
AACAAGCACAGAGCCAGAATGAACCAATGTATGGCGAGAAAAATTTATCA
CGTGACCCAGATGGGCGAATCAGAGAGAAGAGCGTTCGGATACAACATCA
AGCGGGGAACGAAGGAAGACGACTAATCTTATGTGGTTGCATCGTGTGTA
GAGAGTGCTTCGAATGGTACATCAACGAGTGCCTGGATATTCAGAAAGAT
ACTCAAAGTAATCATTGCCGGATATTTTCAAAACATTTGTGTTTGCAATG
ACCCTTGTTTTATCAACGCAGGCTATTCCATGCTGACCCCCTCAAATTAC
GGTCCCATGTCGACTCATCGTTCTGATTCGGTGAACTTATTGAAAGTCGT
GCTCAACAATGATTCTACCCTAAAATATACAGGAGATATATCGAAGAACA
CTGCTGTCATTTTTCACTCACTCATAGAACCGGTGGAGAGACAAATCCTG
ATGAAAACAACGAGTCGCATCAAACCTGAATGGATTGAAGAGGTGTCAAG
TGAACGGTGGCAAAAAAGTGTTAATTTCAAATTCGAGAATGGGGAAATCA
AAAGCCTCCTTGAAAATCGATCACGAGAAAATATAGGTGACAGCATTTTG
AGTAAAATGAAGAGAGAAGCTGTTGACGGCAAAACAAAGGAAATTTCTAA
ACTGAAGCACATCAAAATCGAATCCAACATTGCCATCAAAATTTCTTCGC
ACAGTTCAGAAGTCAAAGTATATGGTTCGAAGAAGGAGGTGGAACAAGCG
TGGTGGAAGATCGAAGAAATGTTTGCAAAGTGTTATCGTGAGGTTTACAG
CTCAGATCAAGTGCGAAATTATCCAAACAGGGAAGGAGCTGACAAAATAT
GCAAAATAAAGACATGTCTTGTCATCACGGAAGAGCCTGAGTTACCTCGC
CCTGCAATCACACAGAACTTCGATGAATGGTATTCACAACGGCTTGTTTT
GAATAATAAAGAACACAAGATTCAGGATACACAGATCGCTAAAATGTTGT
CAACACTAAAAGAAGATCTACAAGATGATTTGAAAACATCATACGAAGAA
CCAAAGATCCTTTGCATATCAATTTCTCTGGTTAAGATCAAATTCAAGAG
TACAGATTTGTCAAGAGAATACGAGAAGTTATTGAATGTCAACACATCGA
GTGAGCAATACTCTCCCATTAAAAGGATACAAGAATTCTTTGAAGGAGAC
ACGAAAGCCTTCTTGGACCAGGAGCTGGAGCTTCGTGTTAAGAATACTAA
TTTATACCCATCAGTACGAGAGCTCACTGAGTCATACCAAGACATAGAAC
TGGTGGTAGGACAAAAGAATGACCTTTTTCGTCTCAAGAAAGACAAAGAG
AATCGTAAAGGAGGCAACTTTCAGAACAAACTAGACGAAGTCATCGCAAA
GTTGAAAGATCAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008365XLOC_008365Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014963-proteinTCONS_00014963-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014963-exon-sc0000201-1575043694:193749..194968TCONS_00014963-exon-sc0000201-1575043694:193749..194968Clytia hemisphaericaexon
TCONS_00014963-exon-sc0000201-1575043694:192708..193485TCONS_00014963-exon-sc0000201-1575043694:192708..193485Clytia hemisphaericaexon
TCONS_00014963-exon-sc0000201-1575043694:191681..192335TCONS_00014963-exon-sc0000201-1575043694:191681..192335Clytia hemisphaericaexon
TCONS_00014963-exon-sc0000201-1510915933:193749..194968TCONS_00014963-exon-sc0000201-1510915933:193749..194968Clytia hemisphaericaexon
TCONS_00014963-exon-sc0000201-1510915933:192708..193485TCONS_00014963-exon-sc0000201-1510915933:192708..193485Clytia hemisphaericaexon
TCONS_00014963-exon-sc0000201-1510915933:191681..192335TCONS_00014963-exon-sc0000201-1510915933:191681..192335Clytia hemisphaericaexon
TCONS_00014963-exon-sc0000201-1491911889:193749..194968TCONS_00014963-exon-sc0000201-1491911889:193749..194968Clytia hemisphaericaexon
TCONS_00014963-exon-sc0000201-1491911889:192708..193485TCONS_00014963-exon-sc0000201-1491911889:192708..193485Clytia hemisphaericaexon
TCONS_00014963-exon-sc0000201-1491911889:191681..192335TCONS_00014963-exon-sc0000201-1491911889:191681..192335Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:191681..194968 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.188711 0.100032 0.299244 0.257282 0.634763 0.399109 0.466574 0.566541 0.527584 0.715811 0.661811 0.341285 0.397703 0.417302 0.893873 1.43135 0.392303 0.481605 1.02341 1.25951 0.435089 0.431289 1.16508 1.15495 0.577983 0.779688 3.64546 3.01576 0.386686 0.235997
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014963 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top