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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014853 ID=TCONS_00014853|Name=TCONS_00014853|organism=Clytia hemisphaerica|type=transcript|length=4375bp
TTGTGTTTGTTTGTTAAGAGAAGGGAAGAATGCAATTGAAGAATTATTTC
ATCGaTCCACCAGCGGTGCGAATCAAGAAATCTCGATCATTCGAACTCGA
TAGAAAAGCGGAAGTCATGATCAACAAGGATCAAACCTTCGAATCCAAAT
ATGAACTCCTGGAGGAGCTTGGAAAGGGTATGTTCGGCACCGTCAAAAAA
TGTCAGTGTACAGACACCGGCGTCGAATATGCGGCCAAAGTGGTCCGAAA
GACCacgaaaaacaaagaagaagttGTGCGTGAAGTATCCACTATGAACC
TACTGCAACATAAATCCATTGCTCAAATCCACGATGCGTTCGAAAGCAAA
AGACAGATGGTTATTGTCATGGAATTGATTCGCGGAAAAGAATTGTTCGA
AAAAGTTTGTCAGGAGGATACTTTACTGACTGAGAAACAATGTGTTTATT
ATTTACGGCAAATTTTATCGGGCGTGGAATACATGCATAAAAAGAAGATT
GTACATCTAGATCTGAAGCCGGAGAACATTCTGTGCATCGATTCACCACA
AGGTTATGATGAAATCAAACTGATCGATTTCGGTTTAGCGAGAGATTTGT
CATCCACCAAACAGTTATCCTGTATTTGCGGGACTCCTGAATTCGTTGCT
CCCGAAGTCATcaatttcgatccaatcagcgTCCAATCAGACATGTGGTC
ATTAGGAGTCATAACGTACGTCTTATTAAGTGGGATCTCTCCTTTCCTTG
GTGATGATGATGGTGAAACATTGCAGAATGTCACTTTCGGTGAATTCGAC
TTTGAGGATGAAGATGGTGCTTTTGAACACGTTTCTGAAATAGCTAAAGA
ATTCATTTCAGATCTACTCTGTCTGAATCCAAGGGACCGTTTATCTGTGG
GAGACTGTTTGGAACATTCCTGGTTAAACACACAAACAAACGAGGAAGAA
TTAGACACCACCAATCTAAAGAAATTCATCGCAAGGCGACGGTGGCTGCG
TACAATACACGCCATCAAGGCTGTCGGTCGTTTCAATCAAGTCGCCAATT
CGCTTGGCGGGAAAGGAAAGAAAGGCGGTGACTCCCTAGCTAAAACCATG
CTTGCCGCCCTCAATGCCGCCAATAAAGAAAATTCCATTGACAAGGAAGA
TGAAACTAAAGTTGAAGAAATAATCAGCCAATCAGCAGACGTGGATTCAA
AATCTAACCAATCAGAGAGTGCTCCCGAAACCGTAATCGAATCAAATGGC
TTCCACAAGGACAAACCTGCCCAATCAGAGATTGTTACTAATGGCAACAC
AGAGTCCACTTTTGGAGACGATGATGAAATGTCTGATATGTTAAAGAAGC
GAGCGGAAAGGAGGCGGAGAAAACgttttgaagatgaagaagaggaTTAC
GACGTCTTTGCAAACGTTTCCAATAGAGTAACGGAAGAAGTAACTCAAGC
TACGGTAGAGTCTCCTAAAGTTACAGAAACCTCAGTCGAGGAATGTGAAA
AAAGTACTACCATAGAACCCTCTGAAGATACACAAGAATCCGTTAAAGAC
ACGCCAGAATCTTTGCAAGCTACTGAAGAGGACGTTGCGACGACGCCATC
TGATACCGTGGAACCTATTAATGTCACGCTCGAATCTGAGAACGTTTTTA
CGACCGAGGAGGACGTCACAGAAACCAAATACGACGTCAACAACAATGAG
ATTTCTGACGAACCAGCGGGTGTTATCGTTGAAAATGATGATAAAATGTT
GAACAATGAACAAAAATCTGTTGAAAATCTTGTTGAGAAAGACATTTCTG
TTGAATCTGTTAAAAATGTTTCTGTTGACGAAAAAGTAGAACATTCTGTT
GTAGATGATTATGTTGAAAAAGTATTCACCAAATCTGAAATCAACGACAA
GGTAGAAGTATCACCGTCTCCAGAAATCATTGATAACAAGGAAGAAGCTT
TAAAGATAGATTCCTTTAAGAACTCTGATGACGTTAAGTTTGCATCAGAG
AATGTTGAAGATGAAATAGTTGAAAAACTTTctactgaaaataaaaaatc
tgagGAGAAGCCTGAGtttgaaaagtgggctgaaaaaGAGCCTAAGACGA
AATCAGAGGTGATTAAAAAAGTCAAGGAATCTCCCTCGGTCAAAACTGAG
GAAAAGGAATCTACACTACCTAGCAGAAGGGAACGCCGCAGGGAATCTTC
AACCACAACATCAAGCGAGAAGAAGGAATCCGTTATTTCTCCACGAAGAG
AAAAGGCAAAATCTCCAGAACCCCAGGAGGTCAAGGAATCGTCAAAATCT
TCTATATCCAAAAAAACAGAAGAAGCAAAAGTAGAGGACTCACCAAAACC
TACGAACATCAGGGAATCATCGGAGCCTCTCAAATCTGAAAAGAGAGAGT
CCAGAAGATCTCGAGAAAAATCCCCTGAAATCGAGAAACCCAAACCTAAG
ATGTCTTCGCCAGAGCCAGCAAAGAGGGTTGAGAAGACACCACCAAAGAC
AAGCTCCAAACCACCAAAAGATTCACCTAAGAAGTCGAAAGAACCAGAAG
CCGAAAAGAGCAAAAATGGGAAAGTCACCAGTCCTAAGAGCAGTCGCAAA
ATCGGTAGTAAAATAAGTGGACTACTAAACAAAGTGAGTTCACCAAAATC
GCAACGAAAGACTATCACTTCACCCGCTGCCAAAGACAAGAAACATCTTT
CACCAAAATCATCAAGGAAGCTAGCATCGAAATTTGAAGCACAGCCGACA
GACCCTGACACAAAACAAATCAAGTCACCAccacctacttcaaagaagcc
CATAAAATCTCCACCACCTGCAGTCAAAGATAAACCCAAAAAGAACGCAC
TAAAAACACCAGAAAAATTAACCTCTACAAGCTCAGAAGTATCTGCTACG
CCTGAAAGATCTTCGAAAGCTGCACCGCCGCCCACTTCACCCAAAAGATC
AACACCGCCAGCAGTCCAAGATAAACCTAAATCCTCTAAACCAGAGGAAA
CACCTTCCGCCAAAAAGCAACCACCCTCGGCTTCAACCAAACCAAAGAAA
ACACCAGAGCCTACAGAACCGAAAGATGTCACCGACAGCTCAAGACCGAA
ACCTCAATCGAGTATAACAAAACCTGAAGAAGACACCTCCTCGCCAAAAA
TCCCAGATCGACAAGACCGATTACGTAATCGAGTTGGAAGCCTAGGAAAC
AACGCCAAAACAAATATGCCTGTATCTGGCAAAGATAAAAAAGGACTTTT
TATGGCTTGGGAAACACGTATGTCAACACCTGAACAATCGAGGCGAACCT
ATTCGACTGCGTCTCCTTTAACCAATCGAAATCTGATTGCTGCACGAAAA
GCCTCGCTTAATAGACAAGCGAGTCAAGAGCGATCTTTCGATAGCGACGG
CTCGTCTATTGAAGACCGAACGTCCTCACCTGTCGGTCGTTTTTCGAGAA
ATTCGTCAGTCCGTGTGTCATTGAACGAAAANAACAAATATGCCTGTATC
TGGCAAAGATAAAAAAGGACTTTTTATGGCTTGGGAAACCCGTATGTCAA
CACCTGAACAATCGAGGCGAACCTATTCGACTGCGTCTCCTTTAACCAAT
CGAAATCTGATCGCTGCACGAAAAGTCTCGCTTAATAAACAAGCGAGTCA
AGAGCGATCTTTCGATAGCGACGGCTCGTCTATTGAAGACCGAACATCCT
CGCCTGTCGGTCGTTTTTCGAGAAATTCGTCGGTCCGTGCCTCGTTGAAC
GAAAGTAACTTGTCGACGACTCGTAAGAGACTAGTTACGAAGCCCCATAG
TATAGCGAACAATGGaagtgtcaaaaataaaatggcGATATTTGCCAAAT
TCCAAAAGCAATGATTTAATGacaccattgagtttaaatttTTGGTaaca
taaaattaaaatttgtacATACTTTGGAGCATTTTATTTCATAGGTCGAG
AATTTTAATCAAACTGTTTATCCTCCAGTGCTTGGAGTCTCTGGGAAatt
agtttttaaaatttaggcGTTAAATCTTGACATATGAAATATAGTGTTCT
CACTTCATCATATCTCGTATTAAATTTTGTATatacaattattttttttg
caattaagaaaaataactgcttctgaaattttgctgctttaaGCTTCGAA
ATGACCTTGTTTTGTCAAGAAAGCTTTTGAAGACTTTTATCATTGAATTC
CCtaaattacagaaatattcTCTAAATCATAGCCAGAAAAGCTGTGGAAT
CCTGTGAAGAAGCAAAATGAAGATTGATTAGATTatgattttaattattt
tataataacttttttgtaatttttattacagtatatttcaataaaaagta
aCAACAATATTATAATCTTTACGAG Run BLAST on NCBI transcript from alignment at sc0000200:99896..112515+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014853 ID=TCONS_00014853|Name=TCONS_00014853|organism=Clytia hemisphaerica|type=transcript|length=12620bp|location=Sequence derived from alignment at sc0000200:99896..112515+ (Clytia hemisphaerica)
TTGTGTTTGTTTGTTAAGAGAAGGGAAGAATGCAATTGAAGAATTATTTC
ATCGGTAAGACTGTGTCACAAACTCTTGGGACCATCGCCCCACTAGAAAA
TCTAGCCAAAATCTTTTCCCCAGTAGGAAAAATACCCTTCAATTTCAGCA
TCACTGGAAAATTGATTCTCTTTGTTATTGCCTCTTTATATCTATTCGTG
TTTCTTTGGACGTGAAAAAACGCAGAGTCGAGGAGATTTTTAGTCGAAAC
TCCGGGAGACAAAAAATAAGTTCCTGTTTAATCAgagtttaaagaaggaa
aaataattttgaaataagtttttctgGTTTCTCAGATACTTTCCAAGAAA
AACATTGTATAATTTAATAGAAGGCTGTGGTTTTGTCATCATCTGATGAC
GTGGTGATATGAAAAATTGGTGGGGACGTTCTTGAGAGTATCATTTTTGT
CTTTAGAAATCTTGTCTGCGTTGTTTCTACGTCTCACGCAGACTTTTTGG
ATGCGAAAGTTGACGTTTTTGCATTATTTCGTGAGAATTGGCCCAACATT
GGTCTTGCGTTTTTATGGTACTAAAGTTAAGGCCGTTAGATTTCCCTTCT
CCCCTCTTAAGCAAGTAAAAACTTTCAGCCAATAATGATCAAATGAAGGA
TGACGACGAGGGGGCTGGGGTGGTAAAAATCTTGATGGNAGATTTCCCTT
CTCCCCTCTTAAGCAAGTAAAAACTTTTAGCCAATAATGATAAAATGAAG
GATGACGACGAGGGGGCTGGGGTGGTAAAAATCTTGATGGCTTGGGATCT
TAATTTTATTACTTATAACTCAAAAATACCAGTAGGAATGAGATTTCCGT
GCACTATTCCAGTGAAGTTGGATAGATATTTTCTATATTCtattttgttt
tggaggactacattttttttaaatctagcgatatATTTTAGTTTCAGTTc
ggcatttgtgtaaaaactacgtgCAGTCAAATAAGTGGTCTCATTTTCCA
TCTAGGAGTCTcatctctagcccttcgggcttaaaactcaatCGTTCAAA
CCATCAGAGTATCTtaatgttggaaaaaagccataAGTCAAAAGCCAAGA
GGTTGGCTCTTCCAACAAAAACGTCCTAAAACTGTCTGACGGACAAGTGA
CGTCACTTTGTtgtcaaacaaaaacaaagaatccTATTGGTTCTCGATTG
CGTAACCTTTTTTAATAACCTCACTGTAGACCACAAAATCATGTAATTCG
TGAAATTGATACATACTTGACGAGAGAGCTATTAAAAggctgtaaaagaa
aaaaagatcgaTGAATAGAAGTTGATGAGTTATTTAACGAGTATCTCAGG
ATTTGGAATAAAAATCATTTATTAATGCAGCTTGATTGAGAAAggacatg
aaaacaaaagtgtagtttttttttgaatagtAGTTATTCATATTTGAGGG
ATTAGGGATTCAATTGATAACAGTCGCAGTTGCGAAGGTAATGTTTGTTC
TACGAAACCACAggttaaaattgaatatttccTTGGGTTATTTTTGAAAT
CCCCCTTTGGGGTAAATGAAGACTAGCTGCTGAGTTCTTCcagaaatttg
gtgaaaaatttacttttcttcAAATCTTTGAAGATTATCTTTTCACTTAA
ACTctttttatacattttctatTGAATTTTCTTCATTCTATACCTTTTTA
ATAATGGCAGACCTTGTAAGCCTTTATTGCCGAGTGCAAGGTAAGTAAGA
ATGTAAAAGTTGTTCACTCGAACCTCAAGTGGACCTCGCAGATATGGGAG
TGCTTTATCAGCCAGGATGTTGTAATTTTATATTGCATAGATTGTCAAAG
GCTTTATTTATCAATTAAATAAAACGGCAGATGACTCGGATGTGAAAAAG
TTAAAGATTCTTTTGCTGTTTGACAAATGGCCTTAATTTCAACCTTGGTG
ACGGCTATGTAAATTTGCACTAAATTAAACACAACTATCGACACGACTCG
TTTTCGTTTCAAAGGAAGTTTTCCGATCAAATCAGGTGCCAAAAGAGGTG
ATTGGTATTTTAAAAGAGCCTGGAATATTTCAACTTTTATTAcaaattct
tttctttcagaTCCACCAGCGGTGCGAATCAAGAAATCTCGATCATTCGA
ACTCGATAGAAAAGCGGAAGTCATGATCAACAAGGATCAAACCTTCGAAT
CCAAATATGAACTCCTGGAGGAGCTTGGAAAGTAAGCAGCCttgctattt
ttatttttccgctTTCAATTTCCTATCTAGCAAAAGAGTAGTTTTAGCtt
gcttttttgcttttttgcttCTATTTTCAAACTCAAGCAACAGAAGCAAT
AAACTGCCTGTTTGAGATGTTTCTTTTTAAGACATTTGATGGATATTAGG
GATTTATCATAGCAGCAATGATACTTTCACACGTGTTCGGTAATCCAAAG
GGATCCGTTTCACACCAGTTAGAGCTTACAAAGGATCGATATTTCGGGAA
TATTTCGCTTAACGAAAGTATCCTACTTTTAgtggtttgtttactttttt
aggGTTTTAATCTTTCGGCTTATGGATCGGTTTTCTCTACAGAAAGATTG
ACGTGACTGTGTTATTAAGTAGAGGGTATCTTAATACCAAAAAGTCACTA
TTTTCCAAGTTTGGATTCCTATGTCGGCCTTCATTTCAATAGATTAAGAT
AATCGGATGATCTGAAGTAAACATGAAGCCCAAAAGTTCACAGAGAacca
aattttaaacaaaatggTGTCAAATCCGACAAAAGGCTggctacaatttt
ttttcagataatcTTTCCCGTGTCAtttctgttatttttttgtGTCCTGT
TATTAATGGCAACAAAATCCTTAACTGTAATTATGATTAGCTGTCATTGG
AAatcaaacttaaaataaaattctGGAACGagaaggaaaatttgaaaaaa
tactgaAATGTCTATTCTAAATAAGGATTTGCTTTTCCGGGAGACGTCAT
TTGGTCTATCATCGcagttatttttttcgaattcatTAAATTTCTGATGA
TGTtggtgtttgttttgattactgGTAGTAACAATAAATGGATAGTAACA
GTTAATGAAAACAAATTAGCGTTTTTCCCTTTCTCAAAATTGAACGTCAT
TTGCGATTTAAAGTGCTCTTCCTTATGCCTGAATTAAATGACCTCGTCTG
AGGTGATATAAATATATTGCAATTTTATATGTTGACACTTCCTTGGTTTT
AACTGACGTTAAGGGACCCCCTGGACATACAGCTTCGGTTTTGGGATCCT
TTAATATAACCCTCGGTGAGTATAACCTCCtcaatgaaaaaaaactgtTA
TCAATTAAGAACCCCTAGTTTAATTAACCTCGGCTAGACCCTCCCTTGAA
TTTTTGAAgatgcccagctggcacacaacgttgttttaacgttcatctaa
cgttatatggacgttgtgaacgttagattaacgttgaaacaacgttgtat
gccagCTGGGTGTTGACCCACTGCAATCGCCCATATGCATTTTACATATC
CTTAACACTCCGTGTACCGACTGTTTGCATCGTTGAGATGATGTATGACT
taacaaaattatttgaaaattatcATTAACTCTATCCCAGATGTCTTTCT
GGCAAGGACTTTAATGAAATTATTGTGAGCAGCTTTTTGTGGGGTGAGAC
ATTTCACCTAAAAAGCGTTGTGGTGTGTTTCCTGTCAGTTAAACATCATT
TGCAATAATTTGCACAATTTAATTAACTTGAAACACTATTAGCAGAATCA
TTAGTatatattaagcagatattcgacaagaaaaatcggatatcgaaaat
tattcagtcgagcttgatgatattcgacGAAGCGAAGCTGAGTCGAATAT
TATTAAAACGAGACTGAATAATTTCGATATCCGACTTTTCACGTTGAATA
TATGGTTTATCGTTCACCAATTAGCAGAAAAGCATTGTAATTTTCCCTAC
TTCATTCAGTCTTTCTCTCTTTGTATgacattttcgaacgttttactatC
TTATTAAGgatgtcaatttcattgtttttcattctttaattacataacgt
tcgaatttcctttctttctcttttgttaaaaagaactttcttttatctat
ttaaataattatatcaaaaaactattttctttatgctcgctgctacaaaa
gagatattttactatcggatatctaaaaatattcgacagtGCGTTTTGCT
TAGAGGTGGACGATAATAGTATATATTCAAAAGTCGTAAAAAATTTATTG
GACGTTATACAATATAGTTGATCACTTTCTTCCACGGCAAAGAAAAAGAG
GCCCATCTCACCCTCCTCCATCCTCTCCCCATTTTTCCCCCTGAAAGATT
CACAGGACAAAGTGAACCACCTAAAAAGAATGAcaatttcgaaagaaatt
tttgtgattttgattcTAAGAATGTTTATCCTAGATTTATTCGCCTGGCA
TCGGGCCTTTTATTAGCATATTGCTGTTCGTGGTGCGCTGTGTGTCCGTT
TTTGAGAAATCAGCGCTTTGTCAATTTCAAGTTAATTTTTAAAGAACAGC
GCCTTGTAACTACAACGTATACGCAAACCTTCGACTATTGCTATGTCGCT
TGGCCTTAATGCCGCTTCGGCTTCTTGttgtattttattaaaataaagaa
aaagtgaGAGTAccaaatacatgaaaataatgaaaaagttCCAATTGTAA
GAATCTTTTCAGGTTTTCATACACTATTTTATTTCTACGTTTTATCAGGG
GTATGTTCGGCACCGTCAAAAAATGTCAGTGTACAGACACCGGCGTCGAA
TATGCGGCCAAAGTGGTCCGAAAGACCacgaaaaacaaagaagaagttGT
GCGTGAAGTATCCACTATGAACCTACTGCAACATAAATCCATTGCTCAAA
TCCACGATGCGTTCGAAAGCAAAAGACAGATGGTTATTGTCATGGAATTG
ATTCGCGGAAAAGAATTGTTCGAAAAAGTTTGTCAGGAGGATACTTTACT
GACTGAGAAACAATGTGTTTATTATTTACGGCAAATTTTATCGGGCGTGG
AATACATGCATAAAAAGAAGATTGTACATCTAGATCTGAAGGTGAGTAGC
TTCATTTTGGTAAACTTAGCCTTAGGGGGCATGGTCCTTTGCCGAAATGA
TACCAGAAAATGAACACATTAACCTTGAACGAGATTTAAGCTCTATCTTA
GTCTTACAAGGATGACtagctattttttattttcagatattTTCAGACTG
CCTAGCTTTGAGAAGTCAATCCAAAATAGCAGTAGTTATACATGAAACGA
GATGAAATCACTTATATTTACACTGAAAAATAGCTGATTATCTCTCTACT
AAAAACATACTCTATAGAAACCATTCATTTCAATATCTATCCTCGTTTTC
AGCCGGAGAACATTCTGTGCATCGATTCACCACAAGGTTATGATGAAATC
AAACTGATCGATTTCGGTTTAGCGAGAGATTTGTCATCCACCAAACAGTT
ATCCTGTATTTGCGGGACTCCTGAATTCGTTGGTAAGTCTATGTAGTTGC
TTTAGTCCTGCAGATAAGGatttaaatagaccttttcataaactacgtta
cgaacatcacttgcctcgttttgaaattattgccatggtgatcaactccc
agcggattttattaaaactacttcctattcataaaataatttattaacac
catggtaattgtttgaatacgaggcaagtgatgttcgtgacgtaatttat
gaaaaggtctatcaatATAGCCTTAACTGATGCTTTGACGttgctttgat
tttttaagcaaGCCGGGTGGGTCACCTTCCAAAACGGATTTTGAATGTAT
AAAACCAGGACCAGCAAATTTAGAATTTCTACCGTCGTTCTGGTTAAGAT
AACATTTTCCGTATTGAGATAACTATGGATATTTCTGATGCTTTTATTTC
ACGGGTTAACCGGATGCAAAAGTTCCTCTTCAGGGGTTTTAAGATATCTT
TTGTCCAACCGATATAATGAATAACTTTCTGGGGCTTATTCTCGAATTAG
CCAATACCCTGGTCTTTTTCCGATGAAGAGTGGTCATTGACGTCTTGTCA
GAATGTAGTGGCATCCTTTCAGAAGAAAAGTATTTCACACTCATAAATCA
ACACTTTTCTCTTTCCAGCTCCCGAAGTCATcaatttcgatccaatcagc
gTCCAATCAGACATGTGGTCATTAGGAGTCATAACGTACGTCTTATTAAG
TGGGATCTCTCCTTTCCTTGGTGATGATGATGGTGAAACATTGCAGAATG
TCACTTTCGGTGAATTCGACTTTGAGGATGAAGATGGTGCTTTTGAACAC
GTTTCTGAAATAGCTAAAGAATTCATTTCAGATCTACTCTGTCTGAATCC
AAGGTATGTACATTCCCTGCTGACATATaatgttgttttaacgttcatct
aatgttcacaacgtccatataatgttGGGTTGAATATCTTCGTCGAACCT
TCATGACCAGGTGAAGTTAGCACATTAGTATCCGTAGCTTCATCAAGTCA
GGAGGTATAAGCACCCCCTGGTCAAGCGTTAAATAATATGCATTTCATTT
GCTTTATTATTTTCTATTGGGATCTGTTTCCTCGTTGTCATTCGTTGTTT
TTTTAGATctgcaaacaagaaaaaagatGAAATTACGATAGTCTGCATGA
ACCAGATGAAGGAAatttttattataaattcaAATCGTTTCTTTTAGGGA
CCGTTTATNTTTTTTAGATctgcaaacaagaaaaaagatGAAATTACGAT
AGTCTGCATGAACCAGATGGAGGAAATTTTTACTATAAATTCAAATCGTT
TCTTTTAGGGACCGTTTATCTGTGGGAGACTGTTTGGAACATTCCTGGTT
AAACGTAAGTTCCATAATAGTATCACTCCATATCCTCGCTTTAGTTTAAC
TGTCTTGAGCTGATTAAAGTTTAAAAGAATAAATACTTTAGTTTCAGCCA
GAACAGCTTCCCTTTTACCCAATAAGATTTGTACTTTCGAGGGCGATGGA
GTATGTCTGAAGCGATTCGGAATAACTCGCAACTTTGTCcagcaaaatcg
aggacgaaaACAGTGCTGATCAGGCCTATCCCGGAAGAGAACTTAATCAA
TCCGTAGATGATCTATTGTAGAAGTTTTTTTACAGTTGTAAATCAATGTT
TTCCCAATAGTAAAGGAAAGTCTTCCCCATAAGTGAACCAATGTTTTCCA
CATCTTCGTTCAGACACAAACAAACGAGGAAGAATTAGACACCACCAATC
TAAAGAAATTCATCGCAAGGCGACGGTGGCTGGTACGTACTAACATATCC
AATCCATTACGTAATAGCTTCTACTATACAACAAGGAAACGATAAAATCT
TTTGTAGTCTTAAGGGTATTTATCAACTATCTGTGTTAAAGACACCTTTC
AGCCTATACTTTTTACCGCAATGTTCGATCATaataatttcttaaaaaac
cgTAAATTTGGAGCCCCAAAGAAAACATTCACGCAATTGTACGTGGCCGT
GTTTCTAATTTTGCATATAGCCTCCAAATCTAAGTTACAATGCGTCGTCT
ACATcactaaaggttcaatctcaaaataagtgtcttggaaaattagaaat
cttgcaattctgttctgcctttgagattggcctttttgtcatatGAACCC
ATTGACTATTCCTCTACAAGGAAAAagggcaatctcaatctcaaagatga
tccaccacagtaaaacttttaattttacaaggtactaattttgagattta
accTTTAGTCATGAGAACGGCGAATGCAGACACTAGAATAGTTTTcatta
atgggctcttccagaaaaaacgTCCATTCGAGAGACAAGagtgatttttt
cgaaaaagatttttcatcaGCGAatatattgggctcttccagaaaaaatc
cgttcatggggggtggaggataNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccgtctattcgggag
acaagagtagtaTTATAATCATTATTTGATCTTTTCTTTTTAGCGTACAA
TACACGCCATCAAGGCTGTCGGTCGTTTCAATCAAGTCGCCAATTCGCTT
GGCGGGAAAGGAAAGAAAGGCGGTGACTCCCTAGCTAAAACCATGCTTGC
CGCCCTCAATGCCGCCAATAAAGAAAATTCCATTGACAAGGAAGATGAAA
CTAAAGTTGAAGAAATAATCAGCCAATCAGCAGACGTGGATTCAAAATCT
AACCAATCAGAGAGTGCTCCCGAAACCGTAATCGAATCAAATGGCTTCCA
CAAGGACAAACCTGCCCAATCAGAGATTGTTACTAATGGCAACACAGAGT
CCACTTTTGGAGACGATGATGAAATGTCTGATATGTTAAAGAAGCGAGCG
GAAAGGAGGCGGAGAAAACgttttgaagatgaagaagaggaTTACGACGT
CTTTGCAAACGTTTCCAATAGAGTAACGGAAGAAGTAACTCAAGCTACGG
TAGAGTCTCCTAAAGTTACAGAAACCTCAGTCGAGGAATGTGAAAAAAGT
ACTACCATAGAACCCTCTGAAGATACACAAGAATCCGTTAAAGACACGCC
AGAATCTTTGCAAGCTACTGAAGAGGACGTTGCGACGACGCCATCTGATA
CCGTGGAACCTATTAATGTCACGCTCGAATCTGAGAACGTTTTTACGACC
GAGGAGGACGTCACAGAAACCAAATACGACGTCAACAACAATGAGATTTC
TGACGAACCAGCGGGTGTTATCGTTGAAAATGATGATAAAATGTTGAACA
ATGAACAAAAATCTGTTGAAAATCTTGTTGAGAAAGACATTTCTGTTGAA
TCTGTTAAAAATGTTTCTGTTGACGAAAAAGTAGAACATTCTGTTGTAGA
TGATTATGTTGAAAAAGTATTCACCAAATCTGAAATCAACGACAAGGTAG
AAGTATCACCGTCTCCAGAAATCATTGATAACAAGGAAGAAGCTTTAAAG
ATAGATTCCTTTAAGAACTCTGATGACGTTAAGTTTGCATCAGAGAATGT
TGAAGATGAAATAGTTGAAAAACTTTctactgaaaataaaaaatctgagG
AGAAGCCTGAGtttgaaaagtgggctgaaaaaGAGCCTAAGACGAAATCA
GAGGTGATTAAAAAAGTCAAGGAATCTCCCTCGGTCAAAACTGAGGAAAA
GGAATCTACACTACCTAGCAGAAGGGAACGCCGCAGGGAATCTTCAACCA
CAACATCAAGCGAGAAGAAGGAATCCGTTATTTCTCCACGAAGAGAAAAG
GCAAAATCTCCAGAACCCCAGGAGGTCAAGGAATCGTCAAAATCTTCTAT
ATCCAAAAAAACAGAAGAAGCAAAAGTAGAGGACTCACCAAAACCTACGA
ACATCAGGGAATCATCGGAGCCTCTCAAATCTGAAAAGAGAGAGTCCAGA
AGATCTCGAGAAAAATCCCCTGAAATCGAGAAACCCAAACCTAAGATGTC
TTCGCCAGAGCCAGCAAAGAGGGTTGAGAAGACACCACCAAAGACAAGCT
CCAAACCACCAAAAGATTCACCTAAGAAGTCGAAAGAACCAGAAGCCGAA
AAGAGCAAAAATGGGAAAGTCACCAGTCCTAAGAGCAGTCGCAAAATCGG
TAGTAAAATAAGTGGACTACTAAACAAAGTGAGTTCACCAAAATCGCAAC
GAAAGACTATCACTTCACCCGCTGCCAAAGACAAGAAACATCTTTCACCA
AAATCATCAAGGAAGCTAGCATCGAAATTTGAAGCACAGCCGACAGACCC
TGACACAAAACAAATCAAGTCACCAccacctacttcaaagaagccCATAA
AATCTCCACCACCTGCAGTCAAAGATAAACCCAAAAAGAACGCACTAAAA
ACACCAGAAAAATTAACCTCTACAAGCTCAGAAGTATCTGCTACGCCTGA
AAGATCTTCGAAAGCTGCACCGCCGCCCACTTCACCCAAAAGATCAACAC
CGCCAGCAGTCCAAGATAAACCTAAATCCTCTAAACCAGAGGAAACACCT
TCCGCCAAAAAGCAACCACCCTCGGCTTCAACCAAACCAAAGAAAACACC
AGAGCCTACAGAACCGAAAGATGTCACCGACAGCTCAAGACCGAAACCTC
AATCGAGTATAACAAAACCTGAAGAAGACACCTCCTCGCCAAAAATCCCA
GATCGACAAGACCGATTACGTAATCGAGTTGGAAGCCTAGGAAACAACGC
CAAAACAAATATGCCTGTATCTGGCAAAGATAAAAAAGGACTTTTTATGG
CTTGGGAAACACGTATGTCAACACCTGAACAATCGAGGCGAACCTATTCG
ACTGCGTCTCCTTTAACCAATCGAAATCTGATTGCTGCACGAAAAGCCTC
GCTTAATAGACAAGCGAGTCAAGAGCGATCTTTCGATAGCGACGGCTCGT
CTATTGAAGACCGAACGTCCTCACCTGTCGGTCGTTTTTCGAGAAATTCG
TCAGTCCGTGTGTCATTGAACGAAAANAACAAATATGCCTGTATCTGGCA
AAGATAAAAAAGGACTTTTTATGGCTTGGGAAACCCGTATGTCAACACCT
GAACAATCGAGGCGAACCTATTCGACTGCGTCTCCTTTAACCAATCGAAA
TCTGATCGCTGCACGAAAAGTCTCGCTTAATAAACAAGCGAGTCAAGAGC
GATCTTTCGATAGCGACGGCTCGTCTATTGAAGACCGAACATCCTCGCCT
GTCGGTCGTTTTTCGAGAAATTCGTCGGTCCGTGCCTCGTTGAACGAAAG
TAACTTGTCGACGACTCGTAAGAGACTAGTTACGAAGCCCCATAGTATAG
CGAACAATGGaagtgtcaaaaataaaatggcGATATTTGCCAAATTCCAA
AAGCAATGATTTAATGacaccattgagtttaaatttTTGGTaacataaaa
ttaaaatttgtacATACTTTGGAGCATTTTATTTCATAGGTCGAGAATTT
TAATCAAACTGTTTATCCTCCAGTGCTTGGAGTCTCTGGGAAattagttt
ttaaaatttaggcGTTAAATCTTGACATATGAAATATAGTGTTCTCACTT
CATCATATCTCGTATTAAATTTTGTATatacaattattttttttgcaatt
aagaaaaataactgcttctgaaattttgctgctttaaGCTTCGAAATGAC
CTTGTTTTGTCAAGAAAGCTTTTGAAGACTTTTATCATTGAATTCCCtaa
attacagaaatattcTCTAAATCATAGCCAGAAAAGCTGTGGAATCCTGT
GAAGAAGCAAAATGAAGATTGATTAGATTatgattttaattattttataa
taacttttttgtaatttttattacagtatatttcaataaaaagtaaCAAC
AATATTATAATCTTTACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014853-exon-sc0000200-1491911889:99896..99949 | TCONS_00014853-exon-sc0000200-1491911889:99896..99949 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1510915933:99896..99949 | TCONS_00014853-exon-sc0000200-1510915933:99896..99949 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1575043694:99896..99949 | TCONS_00014853-exon-sc0000200-1575043694:99896..99949 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1491911889:102006..102126 | TCONS_00014853-exon-sc0000200-1491911889:102006..102126 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1510915933:102006..102126 | TCONS_00014853-exon-sc0000200-1510915933:102006..102126 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1575043694:102006..102126 | TCONS_00014853-exon-sc0000200-1575043694:102006..102126 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1491911889:104694..105036 | TCONS_00014853-exon-sc0000200-1491911889:104694..105036 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1510915933:104694..105036 | TCONS_00014853-exon-sc0000200-1510915933:104694..105036 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1575043694:104694..105036 | TCONS_00014853-exon-sc0000200-1575043694:104694..105036 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1491911889:105348..105477 | TCONS_00014853-exon-sc0000200-1491911889:105348..105477 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1510915933:105348..105477 | TCONS_00014853-exon-sc0000200-1510915933:105348..105477 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1575043694:105348..105477 | TCONS_00014853-exon-sc0000200-1575043694:105348..105477 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1491911889:106114..106348 | TCONS_00014853-exon-sc0000200-1491911889:106114..106348 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1510915933:106114..106348 | TCONS_00014853-exon-sc0000200-1510915933:106114..106348 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1575043694:106114..106348 | TCONS_00014853-exon-sc0000200-1575043694:106114..106348 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1491911889:106804..106849 | TCONS_00014853-exon-sc0000200-1491911889:106804..106849 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1510915933:106804..106849 | TCONS_00014853-exon-sc0000200-1510915933:106804..106849 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1575043694:106804..106849 | TCONS_00014853-exon-sc0000200-1575043694:106804..106849 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1491911889:107209..107277 | TCONS_00014853-exon-sc0000200-1491911889:107209..107277 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1510915933:107209..107277 | TCONS_00014853-exon-sc0000200-1510915933:107209..107277 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1575043694:107209..107277 | TCONS_00014853-exon-sc0000200-1575043694:107209..107277 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1491911889:109139..112515 | TCONS_00014853-exon-sc0000200-1491911889:109139..112515 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1510915933:109139..112515 | TCONS_00014853-exon-sc0000200-1510915933:109139..112515 | Clytia hemisphaerica | exon |
| TCONS_00014853-exon-sc0000200-1575043694:109139..112515 | TCONS_00014853-exon-sc0000200-1575043694:109139..112515 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000200 | supercontig | sc0000200:99896..112515 + |
Blast
BLAST of TCONS_00014853 vs. Swiss-Prot (Human)
Match: MYLK (Myosin light chain kinase, smooth muscle OS=Homo sapiens GN=MYLK PE=1 SV=4) HSP 1 Score: 288.5 bits (737), Expect = 7.454e-79 Identity = 148/315 (46.98%), Postives = 210/315 (66.67%), Query Frame = 3
Query: 114 VMINKDQTFESKYELLEELGKGMFGTVKKCQCTDTGVEYAAKVVRK-TTKNKEEVVREVSTMNLLQHKSIAQIHDAFESKRQMVIVMELIRGKELFEKVCQEDTLLTEKQCVYYLRQILSGVEYMHKKKIVHLDLKPENILCIDSPQGYDEIKLIDFGLARDLSSTKQLSCICGTPEFVAPEVINFDPISVQSDMWSLGVITYVLLSGISPFLGDDDGETLQNVTXXXXXXXXXXXXXXHVSEIAKEFISDLLCLNPRDRLSVGDCLEHSWLNTQTNEEE---LDTTNLKKFIARRRWLRTIHAIKAVGRFNQVA 1046
V IN +Q Y++ E LG G FG V + T +A K + + K KE + +E+S MN L H + Q DAFE K +V+V+E++ G ELFE++ ED LTE++C+ Y+RQI GVEY+HK+ IVHLDLKPENI+C++ + IKLIDFGLAR L + L + GTPEFVAPEVIN++PI +DMWS+GVI Y+L+SG+SPF+GD+D ETL NVT ++ +D AF+ +S+ AK+FIS+LL + ++RL CL+H WL T E L +KK++ARR+W +T +A++A+GR + +A
Sbjct: 1452 VTINTEQKVSDFYDIEERLGSGKFGQVFRLVEKKTRKVWAGKFFKAYSAKEKENIRQEISIMNCLHHPKLVQCVDAFEEKANIVMVLEIVSGGELFERIIDEDFELTERECIKYMRQISEGVEYIHKQGIVHLDLKPENIMCVN--KTGTRIKLIDFGLARRLENAGSLKVLFGTPEFVAPEVINYEPIGYATDMWSIGVICYILVSGLSPFMGDNDNETLANVT--SATWDFDDEAFDEISDDAKDFISNLLKKDMKNRLDCTQCLQHPWLMKDTKNMEAKKLSKDRMKKYMARRKWQKTGNAVRAIGRLSSMA 1762
The following BLAST results are available for this feature:
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