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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014781 ID=TCONS_00014781|Name=TCONS_00014781|organism=Clytia hemisphaerica|type=transcript|length=2144bp
ATCGTCTGCGATATTCTTCACTAGGTAGATGAGACACTTTTGAGACAAAT
TCAGCTGTAGTGTTTACACAGGTCCTACTTAATAAATTTCAAACTCTTAA
TTTcagcaaatttgaaaaaaatggtgaaatatGATGGATTGTAAATTTCT
TATTCCTGTCAAATTTTAGGTCAAATTATAAACACTGTTACAGTATTGGA
ATTGTGCCATTAAGAAGAGGAGATTCAAAAATGGCTCAAGTTCTACGCAA
AATTGCCAGcaTGAAGCTAACGAACAAAGCCGTCCAATCGGGCCGTGCAA
AAGAACACGAAACATGGAAAAACACGTTGATCAATAAGGAACGTGATAAA
CTTCTACAAGAATTTCTATTGGCTCGTGAGGAATTAAAAACTCAGTTCGA
TTGTGAGAAACGAGAGCTTGTCGGTAATTACGAGCGACGTTTACGTTATT
TACGACGACTTTTAGAAGACTGCGATGAAAATATTAACATGTTGAAGCTA
AATCTTGATGcagaaaaggaagaaaatttcattttgaaaacgaaaatcaT
GGAACTTGAGCGTGAAAGAATTCAAAAAGATGTTGATGAAAACCTACCGA
AATTTTCAAGTCACAAAGCAGGTTATTTGAATCAAAGCTACGATAAAGAT
TCTGTTACGACATCCTTCCCTTGTAGTCGTAATACTTCAACGCGTAAATC
CTCATACCAAAGCTACGTTTCAACACCACAGAGATCTTCAATCGACGGTT
TAAAATATAGTGATCGTTTCGCCAGCTGTGGATCCCTTGGTACTAAAGAC
AGTTGCTTCACAAGTGTTTCCACACTCTCGACGGTCCCGTCATTCGACGA
GGTACAGGATGACGTGCACGCTAATTGCCGTAAAGAATTTAATCGTTTGT
TAAAGGAATTAAGAGATAAACAAGACAAATATGATTCACAGTTGGAAATT
GAGAAAGAACGAATGAACGAACAAATACAAAATGAGAAACTCCAATTAGA
ACGAATCGTCTACCGGCAACTTAACGTGCGCCTAGATcgagaaataaaaa
agcaagAACTCCTTTTAACAGAAAATACACATTTGAGACGTACCATTTCG
AACGCTATTATGGAAAGAATGCAATGTGAATGTCGACAACAAAAGAGTTC
GAAAAGCGGCCATCATTGGAAGGAATCGAATTCTGATAGTGGTGCCGATG
TCGGGGATAATCAATCCGATGAAGGTTCAGATGGTTCCGATTCGGGAAAA
GGTAGCTTAACACGGGAAAACTATTTTACAGACTCATGCGAAGATCTTAT
AAAAATGGGATTGATAGACAAAGTAGTTGAAAGCTCTGATaatgtttttc
ttgtttctCCTTCAAAAGATAATGCTAACGGATTCTTAGGTGAAAATCGG
AATTTTAAAGAAGAACATGATTTCAATGAAGAGTGCTTAGAAGAGGTAGC
GCTCTTTAAAGAGGATTTGAGACGCAAATTATTCGAATTGGAAGCTCTTT
TGAATAATGACAAAGGAGAATGCTAATGATATTGAACCTGATGAAAAAAC
GTTTGTTTTAAATTCGAAGTTTGGTTGGCAAATGGTTTGTCTTGGCAGAA
ATTTCTTAAATCGATCTATAAGCAATAAAATATTTATGTACGATATTTTG
GaacatttatttacttttcacaTTATTGTTTCTTTGACTAATTTGTATGT
AACTATGTAAAATACGGTGTTTTTTATCACCTTATCTGTAATTCTGATGA
TTAAGAAAGCATAAAGATTTATTCTTCATCATCAACGAGATCACAGGTGG
TGTGGTGGCGTGATGgcatgaatttttgaaaaataagtgaTTGATAGGTA
ATGTTTGCTCTTAATTTTTAATTCTCTCTATAGTGACTAGACTGACACat
atgcgcgataaaatttctaaactTGGTCGTCAGGGgctgatattttcttt
gaaaactcggcCTCTCTGATAGTGATAACTCAGGGTAGGTAAGTGTAGCC
CAATAACAGTTTgttaattgaaaattttctctgtCTTCTCTTATCCGCCT
ACTCGATCGGTAACATTTGGTAAATCTTGCACTCGTAGGAATAGGGTCCT
AAGGATATGGCGTTGAAGTCAgcggcgttgtggcaggggagGGG Run BLAST on NCBI protein sequence of TCONS_00014781-protein >TCONS_00014781-protein ID=TCONS_00014781-protein|Name=TCONS_00014781-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
MAQVLRKIASMKLTNKAVQSGRAKEHETWKNTLINKERDKLLQEFLLARE
ELKTQFDCEKRELVGNYERRLRYLRRLLEDCDENINMLKLNLDAEKEENF
ILKTKIMELERERIQKDVDENLPKFSSHKAGYLNQSYDKDSVTTSFPCSR
NTSTRKSSYQSYVSTPQRSSIDGLKYSDRFASCGSLGTKDSCFTSVSTLS
TVPSFDEVQDDVHANCRKEFNRLLKELRDKQDKYDSQLEIEKERMNEQIQ
NEKLQLERIVYRQLNVRLDREIKKQELLLTENTHLRRTISNAIMERMQCE
CRQQKSSKSGHHWKESNSDSGADVGDNQSDEGSDGSDSGKGSLTRENYFT
DSCEDLIKMGLIDKVVESSDNVFLVSPSKDNANGFLGENRNFKEEHDFNE
ECLEEVALFKEDLRRKLFELEALLNNDKGEC Run BLAST on NCBI transcript from alignment at sc0000198:349790..353221+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014781 ID=TCONS_00014781|Name=TCONS_00014781|organism=Clytia hemisphaerica|type=transcript|length=3432bp|location=Sequence derived from alignment at sc0000198:349790..353221+ (Clytia hemisphaerica)
ATCGTCTGCGATATTCTTCACTAGGTAGATGAGACACTTTTGAGACAAAT
TCAGCTGTAGTGTTTACACAGGTCCTACTTAATAAATTTCAAACTCTTAA
TTTcagcaaatttgaaaaaaatggtgaaatatGATGGATTGTAAATTTCT
TATTCCTGTCAAATTTTAGGTCAAATTATAAACACTGTTACAGTATTGGA
ATTGTGCCATTAAGAAGAGGAGATTCAAAAATGGCTCAAGTTCTACGCAA
AATTGCCAGGTGAGATATAATTATATATATGATTTTACAGACGTCCAACG
GATGGGAAGAATTAGCTCcgatttttgtgaattttttctGCCACTTTGGG
AAGATTCGGAAAAAGTCGAAAGTCAAAAAACGACTCAAATCAAACTCGTG
CGAAGCTCTTTGATGATAAGCAAAAATTACCCCTGCTGGGTATGAAGCGG
TAAATTCTCATCTACAATCAGTAAAAAATATGTGCCGATTTCTTGAAAAT
CCCCCCTAATATCAGTACAGTGTTGATgtgagcttattctgagcatGGTG
GCAGCCTTTCCACCCATCAACATTGATACTAGGGGGGGGAGGAATTCTTG
CCACAATATTTGGTCACAGCTTGTATAAATAATTGTTCGTGAGGGCTGAT
AGCAGTGATTATCATTTCCAGTTGAGTCCTGGGAGCTCGTCTTGTTTTCC
AATCTCTGGAAATACGAGAAGGGAATTTTAATCATAAATGCTCAAATTTC
TAtataatgaaaatatatatgcggtgatcaaaaaaataatccgaaatctg
GTCACGTACGGAAAGAGGGATTTATTAGGActtttatttgaatttaaaaa
aattttaaccaaaaatactatttgtttctaaaattttctgatGAGCTCTA
AGTAAGTTTCGTTAGCAGACCAGAATTTGTGTTTTTATATTGAAACTCTA
GCCTTTATCGAAGATCACAATCAAAGctattatttaaaaacatttttaaa
attagaCTTGGTTCTAAATCATTTAATGATTTTCGGCTATTACATAGACA
GAATATCTTTGTGATACACAGGTTCGGGTCGTtattagtctacacaatag
acagttccaggcttttaggccttactcttggtctataggcactgctatag
gtgGGCACTAGTAACCTCCACCGGAAATTGTTTATTAATAGGTTTTAACA
TAAATaaacaactttcacaaaagatgtttatcaatagagatttcaaataa
aagaatgtttaaaacacagctgattggcttaggtttcgaaattCTCTATT
gcttcattaaaacctcagtgcgcatgcgatttatccggagaatttcaCTA
TTCacaacaagagcagtgctcatatcccgaagggaaggagttttacgctc
gaaacgaaagAAAGACATAACGCCTAGGTCGTTATGCAACCGCTGTCAAA
TGGTCTCTCTGCGAATCAAGGAGTCAATTGGGAATTTTTATTAGCGGTTT
ATGTGAAAAATTTAACGTCGTGAagttttccttctttttttttctagcaT
GAAGCTAACGAACAAAGCCGTCCAATCGGGCCGTGCAAAAGAACACGAAA
CATGGAAAAACACGTTGATCAATAAGGAACGTGATAAACTTCTACAAGAA
TTTCTATTGGCTCGTGAGGAATTAAAAACTCAGTTCGATTGTGAGAAACG
AGAGCTTGTCGGTAATTACGAGCGACGTTTACGTTATTTACGACGACTTT
TAGAAGACTGCGATGAAAATATTAACATGTTGAAGCTAAATCTTGATGca
gaaaaggaagaaaatttcattttgaaaacgaaaatcaTGGAACTTGAGCG
TGAAAGAATTCAAAAAGATGTTGATGAAAACCTACCGAAATTTTCAAGTC
ACAAAGCAGGTTATTTGAATCAAAGCTACGATAAAGATTCTGTTACGACA
TCCTTCCCTTGTAGTCGTAATACTTCAACGCGTAAATCCTCATACCAAAG
CTACGTTTCAACACCACAGAGATCTTCAATCGACGGTTTAAAATATAGTG
ATCGTTTCGCCAGCTGTGGATCCCTTGGTACTAAAGACAGTTGCTTCACA
AGTGTTTCCACACTCTCGACGGTCCCGTCATTCGACGAGGTACAGGATGA
CGTGCACGCTAATTGCCGTAAAGAATTTAATCGTTTGTTAAAGGAATTAA
GAGATAAACAAGACAAATATGATTCACAGTTGGAAATTGAGAAAGAACGA
ATGAACGAACAAATACAAAATGAGAAACTCCAATTAGAACGAATCGTCTA
CCGGCAACTTAACGTGCGCCTAGATcgagaaataaaaaagcaagAACTCC
TTTTAACAGAAAATACACATTTGAGACGTACCATTTCGAACGCTATTATG
GAAAGAATGCAATGTGAATGTCGACAACAAAAGAGTTCGAAAAGCGGCCA
TCATTGGAAGGAATCGAATTCTGATAGTGGTGCCGATGTCGGGGATAATC
AATCCGATGAAGGTTCAGATGGTTCCGATTCGGGAAAAGGTAGCTTAACA
CGGGAAAACTATTTTACAGACTCATGCGAAGATCTTATAAAAATGGGATT
GATAGACAAAGTAGTTGAAAGCTCTGATaatgtttttcttgtttctCCTT
CAAAAGATAATGCTAACGGATTCTTAGGTGAAAATCGGAATTTTAAAGAA
GAACATGATTTCAATGAAGAGTGCTTAGAAGAGGTAGCGCTCTTTAAAGA
GGATTTGAGACGCAAATTATTCGAATTGGAAGCTCTTTTGAATAATGACA
AAGGAGAATGCTAATGATATTGAACCTGATGAAAAAACGTTTGTTTTAAA
TTCGAAGTTTGGTTGGCAAATGGTTTGTCTTGGCAGAAATTTCTTAAATC
GATCTATAAGCAATAAAATATTTATGTACGATATTTTGGaacatttattt
acttttcacaTTATTGTTTCTTTGACTAATTTGTATGTAACTATGTAAAA
TACGGTGTTTTTTATCACCTTATCTGTAATTCTGATGATTAAGAAAGCAT
AAAGATTTATTCTTCATCATCAACGAGATCACAGGTGGTGTGGTGGCGTG
ATGgcatgaatttttgaaaaataagtgaTTGATAGGTAATGTTTGCTCTT
AATTTTTAATTCTCTCTATAGTGACTAGACTGACACatatgcgcgataaa
atttctaaactTGGTCGTCAGGGgctgatattttctttgaaaactcggcC
TCTCTGATAGTGATAACTCAGGGTAGGTAAGTGTAGCCCAATAACAGTTT
gttaattgaaaattttctctgtCTTCTCTTATCCGCCTACTCGATCGGTA
ACATTTGGTAAATCTTGCACTCGTAGGAATAGGGTCCTAAGGATATGGCG
TTGAAGTCAgcggcgttgtggcaggggagGGG Coding sequence (CDS) from alignment at sc0000198:349790..353221+ >TCONS_00014781 ID=TCONS_00014781|Name=TCONS_00014781|organism=Clytia hemisphaerica|type=CDS|length=2592bp|location=Sequence derived from alignment at sc0000198:349790..353221+ (Clytia hemisphaerica)
ATGGCTCAAGTTCTACGCAAAATTGCCAGcaTGAAGCTAACGAACAAAGC
CGTCCAATCGGGCCGTGCAAAAGAACACGAAACATGGAAAAACACGTTGA
TCAATAAGGAACGTGATAAACTTCTACAAGAATTTCTATTGGCTCGTGAG
GAATTAAAAACTCAGTTCGATTGTGAGAAACGAGAGCTTGTCGGTAATTA
CGAGCGACGTTTACGTTATTTACGACGACTTTTAGAAGACTGCGATGAAA
ATATTAACATGTTGAAGCTAAATCTTGATGcagaaaaggaagaaaatttc
attttgaaaacgaaaatcaTGGAACTTGAGCGTGAAAGAATTCAAAAAGA
TGTTGATGAAAACCTACCGAAATTTTCAAGTCACAAAGCAGGTTATTTGA
ATCAAAGCTACGATAAAGATTCTGTTACGACATCCTTCCCTTGTAGTCGT
AATACTTCAACGCGTAAATCCTCATACCAAAGCTACGTTTCAACACCACA
GAGATCTTCAATCGACGGTTTAAAATATAGTGATCGTTTCGCCAGCTGTG
GATCCCTTGGTACTAAAGACAGTTGCTTCACAAGTGTTTCCACACTCTCG
ACGGTCCCGTCATTCGACGAGGTACAGGATGACGTGCACGCTAATTGCCG
TAAAGAATTTAATCGTTTGTTAAAGGAATTAAGAGATAAACAAGACAAAT
ATGATTCACAGTTGGAAATTGAGAAAGAACGAATGAACGAACAAATACAA
AATGAGAAACTCCAATTAGAACGAATCGTCTACCGGCAACTTAACGTGCG
CCTAGATcgagaaataaaaaagcaagAACTCCTTTTAACAGAAAATACAC
ATTTGAGACGTACCATTTCGAACGCTATTATGGAAAGAATGCAATGTGAA
TGTCGACAACAAAAGAGTTCGAAAAGCGGCCATCATTGGAAGGAATCGAA
TTCTGATAGTGGTGCCGATGTCGGGGATAATCAATCCGATGAAGGTTCAG
ATGGTTCCGATTCGGGAAAAGGTAGCTTAACACGGGAAAACTATTTTACA
GACTCATGCGAAGATCTTATAAAAATGGGATTGATAGACAAAGTAGTTGA
AAGCTCTGATaatgtttttcttgtttctCCTTCAAAAGATAATGCTAACG
GATTCTTAGGTGAAAATCGGAATTTTAAAGAAGAACATGATTTCAATGAA
GAGTGCTTAGAAGAGGTAGCGCTCTTTAAAGAGGATTTGAGACGCAAATT
ATTCGAATTGGAAGCTCTTTTGAATAATGACAAAGGAGAATGCTAAATGG
CTCAAGTTCTACGCAAAATTGCCAGcaTGAAGCTAACGAACAAAGCCGTC
CAATCGGGCCGTGCAAAAGAACACGAAACATGGAAAAACACGTTGATCAA
TAAGGAACGTGATAAACTTCTACAAGAATTTCTATTGGCTCGTGAGGAAT
TAAAAACTCAGTTCGATTGTGAGAAACGAGAGCTTGTCGGTAATTACGAG
CGACGTTTACGTTATTTACGACGACTTTTAGAAGACTGCGATGAAAATAT
TAACATGTTGAAGCTAAATCTTGATGcagaaaaggaagaaaatttcattt
tgaaaacgaaaatcaTGGAACTTGAGCGTGAAAGAATTCAAAAAGATGTT
GATGAAAACCTACCGAAATTTTCAAGTCACAAAGCAGGTTATTTGAATCA
AAGCTACGATAAAGATTCTGTTACGACATCCTTCCCTTGTAGTCGTAATA
CTTCAACGCGTAAATCCTCATACCAAAGCTACGTTTCAACACCACAGAGA
TCTTCAATCGACGGTTTAAAATATAGTGATCGTTTCGCCAGCTGTGGATC
CCTTGGTACTAAAGACAGTTGCTTCACAAGTGTTTCCACACTCTCGACGG
TCCCGTCATTCGACGAGGTACAGGATGACGTGCACGCTAATTGCCGTAAA
GAATTTAATCGTTTGTTAAAGGAATTAAGAGATAAACAAGACAAATATGA
TTCACAGTTGGAAATTGAGAAAGAACGAATGAACGAACAAATACAAAATG
AGAAACTCCAATTAGAACGAATCGTCTACCGGCAACTTAACGTGCGCCTA
GATcgagaaataaaaaagcaagAACTCCTTTTAACAGAAAATACACATTT
GAGACGTACCATTTCGAACGCTATTATGGAAAGAATGCAATGTGAATGTC
GACAACAAAAGAGTTCGAAAAGCGGCCATCATTGGAAGGAATCGAATTCT
GATAGTGGTGCCGATGTCGGGGATAATCAATCCGATGAAGGTTCAGATGG
TTCCGATTCGGGAAAAGGTAGCTTAACACGGGAAAACTATTTTACAGACT
CATGCGAAGATCTTATAAAAATGGGATTGATAGACAAAGTAGTTGAAAGC
TCTGATaatgtttttcttgtttctCCTTCAAAAGATAATGCTAACGGATT
CTTAGGTGAAAATCGGAATTTTAAAGAAGAACATGATTTCAATGAAGAGT
GCTTAGAAGAGGTAGCGCTCTTTAAAGAGGATTTGAGACGCAAATTATTC
GAATTGGAAGCTCTTTTGAATAATGACAAAGGAGAATGCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014781-exon-sc0000198-1491911889:349790..350048 | TCONS_00014781-exon-sc0000198-1491911889:349790..350048 | Clytia hemisphaerica | exon |
| TCONS_00014781-exon-sc0000198-1510915933:349790..350048 | TCONS_00014781-exon-sc0000198-1510915933:349790..350048 | Clytia hemisphaerica | exon |
| TCONS_00014781-exon-sc0000198-1575043694:349790..350048 | TCONS_00014781-exon-sc0000198-1575043694:349790..350048 | Clytia hemisphaerica | exon |
| TCONS_00014781-exon-sc0000198-1491911889:351337..353221 | TCONS_00014781-exon-sc0000198-1491911889:351337..353221 | Clytia hemisphaerica | exon |
| TCONS_00014781-exon-sc0000198-1510915933:351337..353221 | TCONS_00014781-exon-sc0000198-1510915933:351337..353221 | Clytia hemisphaerica | exon |
| TCONS_00014781-exon-sc0000198-1575043694:351337..353221 | TCONS_00014781-exon-sc0000198-1575043694:351337..353221 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000198 | supercontig | sc0000198:349790..353221 + |
Blast
The following BLAST results are available for this feature:
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